R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|7486862|pir||T10241 hypothetical protein T11I11.190 - Arabidopsis thaliana
>gi|5123712|emb|CAB45456.1| (AL079347) putative protein
[Arabidopsis thaliana] >gi|7270446|emb|CAB80212.1| (AL161586)
putative protein [Arabidopsis thaliana]
Length = 567
Frame 1 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | 567
0 150 300 450
Plus Strand HSPs:
Score = 748 (263.3 bits), Expect = 4.1e-73, P = 4.1e-73
Identities = 139/178 (78%), Positives = 161/178 (90%), Frame = +1
Query: 1 FLCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATPR 180
FLCGVGTGLAVMNNMGQIGLALGY+DVS+FVS+TSIWGFFGRI+SG++S HFIKKA TPR
Sbjct: 358 FLCGVGTGLAVMNNMGQIGLALGYTDVSIFVSMTSIWGFFGRILSGTISEHFIKKAGTPR 417
Query: 181 PLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGLI 360
PLWNAA+QI+MAVGY+L+A+A+PGSLYIGS+VVG+CYGVRLAITVPTASELFGLKYYGLI
Sbjct: 418 PLWNAAAQIIMAVGYLLMALALPGSLYIGSMVVGVCYGVRLAITVPTASELFGLKYYGLI 477
Query: 361 YNILILNLPLGSFLFSGLLAGILYDMEATTTVGRRQHLYWSSCYRLXFIIMAVPCVVG 534
YNILILN+PLGSFLFSGLLAG+LYD EAT T G + C+R+ FI+MA ++G
Sbjct: 478 YNILILNMPLGSFLFSGLLAGLLYDAEATPTPGGGNTCVGAHCFRIVFIVMAFASIIG 535
>gi|4581109|gb|AAD24599.1|AC005825_6 (AC005825) nodulin-like protein
[Arabidopsis thaliana]
Length = 546
Frame 1 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | 546
0 150 300 450
Plus Strand HSPs:
Score = 741 (260.8 bits), Expect = 2.2e-72, P = 2.2e-72
Identities = 141/178 (79%), Positives = 160/178 (89%), Frame = +1
Query: 1 FLCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATPR 180
FLCGVGTGLAVMNNMGQIGLALGY++VS+FVS+TSIWGFFGRI+SG++S +F+KKA TPR
Sbjct: 337 FLCGVGTGLAVMNNMGQIGLALGYTNVSIFVSMTSIWGFFGRILSGTLSEYFLKKAGTPR 396
Query: 181 PLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGLI 360
PLWNAASQILMAVGYIL+A+A+P SLYIGS+VVG+CYGVRLAITVPTASELFGLKYYGLI
Sbjct: 397 PLWNAASQILMAVGYILMALAVPNSLYIGSMVVGVCYGVRLAITVPTASELFGLKYYGLI 456
Query: 361 YNILILNLPLGSFLFSGLLAGILYDMEATTTVGRRQHLYWSSCYRLXFIIMAVPCVVG 534
YNIL+LNLPLGSFLFSGLLAG LYD EAT T G + CYRL FI+MA+ V+G
Sbjct: 457 YNILVLNLPLGSFLFSGLLAGFLYDAEATPTPGGGNTCVGAHCYRLIFIVMALASVIG 514
>gi|5882744|gb|AAD55297.1|AC008263_28 (AC008263) Strong similarity to
gb|AF031243 nodule-specific protein (Nlj70) from Lotus japonicus
and is a member of the PF|00083 Sugar (and other) transporter
family. EST gb|Z37715 comes from this gene. [Arabidopsis thaliana]
Length = 533
Frame 1 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | 533
0 150 300 450
Plus Strand HSPs:
Score = 380 (133.8 bits), Expect = 4.0e-34, P = 4.0e-34
Identities = 77/178 (43%), Positives = 113/178 (63%), Frame = +1
Query: 4 LCGVGTGLAVMNNMGQIGLALGYSDVSL--FVSLTSIWGFFGRIVSGSVSXHFIKKAATP 177
+CG+G+GL+ +NN+ QIG +L YS V + VSL SIW F GR +G S + K P
Sbjct: 332 ICGMGSGLSTINNIRQIGESLRYSSVEINSLVSLWSIWNFLGRFGAGYASDALLHKKGWP 391
Query: 178 RPLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGL 357
RPL AA+ M++G++++A G+LY+GSV+VG+CYG + ++ SELFG+++ G
Sbjct: 392 RPLLMAATLGTMSIGHLIIASGFQGNLYVGSVIVGVCYGSQWSLMPTITSELFGIRHMGT 451
Query: 358 IYNILILNLPLGSFLFSGLLAGILYDMEATTTVGRRQHLYWSSCYRLXFIIMAVPCVVGF 537
I+N + + P+GS++FS L G +YD A+ G Y S C+RL FIIMA GF
Sbjct: 452 IFNTISVASPIGSYIFSVRLIGYIYDKTAS---GEGNTCYGSHCFRLSFIIMASVAFFGF 508
>gi|6730730|gb|AAF27120.1|AC018849_8 (AC018849) nodulin-like protein;
38383-40406 [Arabidopsis thaliana]
Length = 561
Frame 1 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | 561
0 150 300 450
Plus Strand HSPs:
Score = 379 (133.4 bits), Expect = 7.2e-34, P = 7.2e-34
Identities = 67/178 (37%), Positives = 116/178 (65%), Frame = +1
Query: 1 FLCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATPR 180
+ G+G+G+ V NN+ QIG A G D ++ + L S + F GR+ SG++S HF++ PR
Sbjct: 354 YFLGMGSGVTVSNNLAQIGFAFGIKDTTILLCLFSFFNFIGRLASGAISEHFVRSRTLPR 413
Query: 181 PLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGLI 360
LW A+Q++M ++L AMA+ ++Y+ + ++GIC G + +++ T SELFGL+++G+
Sbjct: 414 TLWMGAAQLVMVFTFLLFAMAIDHTIYVATALIGICMGFQF-LSIATISELFGLRHFGIN 472
Query: 361 YNILILNLPLGSFLFSGLLAGILYDMEATTTVGRRQHLYWSSCYRLXFIIMAVPCVVG 534
+N ++L PLG+ +FS +LAG +YD EA G+ + C+R+ F+++A C +G
Sbjct: 473 FNFILLGNPLGATIFSAILAGYIYDKEADKQ-GKMTCI-GPDCFRVTFLVLAGVCGLG 528
>gi|7487051|pir||T02581 hypothetical protein T16B24.15 - Arabidopsis thaliana
>gi|3402684|gb|AAC28987.1| (AC004697) nodulin-like protein
[Arabidopsis thaliana]
Length = 601
Frame 1 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | || 601
0 150 300 450 600
Plus Strand HSPs:
Score = 376 (132.4 bits), Expect = 2.9e-33, P = 2.9e-33
Identities = 79/188 (42%), Positives = 114/188 (60%), Frame = +1
Query: 4 LCGVGTGLAVMNNMGQIGLALGYS--DVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATP 177
+CGVG L ++N+GQIG +LGY VS FVSL SIW ++GR+VSG VS F+ K P
Sbjct: 353 ICGVGGTLTAIDNLGQIGNSLGYPKRSVSTFVSLVSIWNYYGRVVSGVVSEIFLIKYKFP 412
Query: 178 RPLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGL 357
RPL +L G++L+A +PG LY+ SV++G C+G + + SE+FGLKYY
Sbjct: 413 RPLMLTMVLLLSCAGHLLIAFNVPGGLYVASVIIGFCFGAQWPLLFAIISEIFGLKYYST 472
Query: 358 IYNILILNLPLGSFLFSGLLAGILYDMEA---------TTTVGRRQHLYWSSCYRLXFII 510
+YN + P+GS+L + +AG LYD+EA T G+ + +SC++L FII
Sbjct: 473 LYNFGSVASPIGSYLLNVRVAGYLYDVEAGKQYKALGKTRVEGQDLNCIGTSCFKLSFII 532
Query: 511 MAVPCVVG 534
+A + G
Sbjct: 533 IAAVTLFG 540
>gi|6091732|gb|AAF03444.1|AC010797_20 (AC010797) unknown protein [Arabidopsis
thaliana] >gi|6513938|gb|AAF14842.1|AC011664_24 (AC011664) unknown
protein [Arabidopsis thaliana]
Length = 584
Frame 1 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | 584
0 150 300 450
Plus Strand HSPs:
Score = 362 (127.4 bits), Expect = 9.1e-32, P = 9.1e-32
Identities = 70/147 (47%), Positives = 100/147 (68%), Frame = +1
Query: 4 LCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATPRP 183
L G G+GL V++N+GQ+ +LGY + +FVS+ SIW F GRI G S ++ A PRP
Sbjct: 377 LLGSGSGLTVIDNLGQMSQSLGYDNTHVFVSMISIWNFLGRIGGGYFSELIVRDYAYPRP 436
Query: 184 LWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGLIY 363
+ A +Q++M+VG+I A PG+++IG++++G+ YG AI TASELFGLK +G +Y
Sbjct: 437 VAIAVAQLVMSVGHIFFAYGWPGAMHIGTLLIGLGYGAHWAIVPATASELFGLKKFGALY 496
Query: 364 NILILNLPLGSFLFSGLLAGILYDMEA 444
N L L P GS +FSGL+A +YD EA
Sbjct: 497 NFLTLANPAGSLVFSGLIASSIYDREA 523
Score = 362 (127.4 bits), Expect = 9.1e-32, P = 9.1e-32
Identities = 78/183 (42%), Positives = 113/183 (61%), Frame = +1
Query: 4 LCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATPRP 183
L G G+GL V++N+GQ+ +LGY + +FVS+ SIW F GRI G S ++ A PRP
Sbjct: 377 LLGSGSGLTVIDNLGQMSQSLGYDNTHVFVSMISIWNFLGRIGGGYFSELIVRDYAYPRP 436
Query: 184 LWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGLIY 363
+ A +Q++M+VG+I A PG+++IG++++G+ YG AI TASELFGLK +G +Y
Sbjct: 437 VAIAVAQLVMSVGHIFFAYGWPGAMHIGTLLIGLGYGAHWAIVPATASELFGLKKFGALY 496
Query: 364 NILILNLPLGSFLFSGLLAGILYDMEATTTV-GRRQH------LYWSSCYRLXFIIMAVP 522
N L L P GS +FSGL+A +YD EA G + S CY L +IM+
Sbjct: 497 NFLTLANPAGSLVFSGLIASSIYDREAERQAQGSLFNPDDVLRCRGSICYFLTSLIMSGF 556
Query: 523 CVV 531
C++
Sbjct: 557 CLI 559
>gi|11358583|pir||T51805 nodulin-like protein [imported] - Arabidopsis thaliana
(fragment) >gi|3329368|gb|AAC39501.1| (AF031244) nodulin-like
protein [Arabidopsis thaliana]
Length = 559
Frame 1 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | 559
0 150 300 450
Plus Strand HSPs:
Score = 360 (126.7 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 70/147 (47%), Positives = 100/147 (68%), Frame = +1
Query: 4 LCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATPRP 183
L G G+GL V++N+GQ+ +LGY + +FVS+ SIW F GRI G S ++ A PRP
Sbjct: 377 LLGSGSGLTVIDNLGQMTQSLGYDNTHVFVSMISIWNFLGRIGGGYFSELIVRDYAYPRP 436
Query: 184 LWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGLIY 363
+ A +Q++M+VG+I A PG+++IG++++G+ YG AI TASELFGLK +G +Y
Sbjct: 437 VAIAVAQLVMSVGHIFFAYGWPGAMHIGTLLIGLGYGAHWAIVPATASELFGLKKFGALY 496
Query: 364 NILILNLPLGSFLFSGLLAGILYDMEA 444
N L L P GS +FSGL+A +YD EA
Sbjct: 497 NFLTLANPAGSLVFSGLIASSIYDREA 523
Score = 360 (126.7 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 78/183 (42%), Positives = 113/183 (61%), Frame = +1
Query: 4 LCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATPRP 183
L G G+GL V++N+GQ+ +LGY + +FVS+ SIW F GRI G S ++ A PRP
Sbjct: 377 LLGSGSGLTVIDNLGQMTQSLGYDNTHVFVSMISIWNFLGRIGGGYFSELIVRDYAYPRP 436
Query: 184 LWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGLIY 363
+ A +Q++M+VG+I A PG+++IG++++G+ YG AI TASELFGLK +G +Y
Sbjct: 437 VAIAVAQLVMSVGHIFFAYGWPGAMHIGTLLIGLGYGAHWAIVPATASELFGLKKFGALY 496
Query: 364 NILILNLPLGSFLFSGLLAGILYDMEATTTV-GRRQH------LYWSSCYRLXFIIMAVP 522
N L L P GS +FSGL+A +YD EA G + S CY L +IM+
Sbjct: 497 NFLTLANPAGSLVFSGLIASSIYDREAERQAQGSLFNPDDVLRCRGSICYFLTSLIMSGF 556
Query: 523 CVV 531
C++
Sbjct: 557 CLI 559
>gi|9757793|dbj|BAB08291.1| (AB007650) nodulin-like protein [Arabidopsis
thaliana]
Length = 579
Frame 1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | 579
0 150 300 450
Plus Strand HSPs:
Score = 360 (126.7 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 69/147 (46%), Positives = 99/147 (67%), Frame = +1
Query: 4 LCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATPRP 183
L G G+GL V++N+GQ+ +LGY + + VS+ SIW F GRI G S ++ A PRP
Sbjct: 372 LLGSGSGLTVIDNLGQMSQSLGYDNTHVLVSMISIWNFLGRIGGGYFSELVVRDYAYPRP 431
Query: 184 LWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGLIY 363
+ A +Q++M+VG+I A PG++YIG++++G+ YG AI TASELFGLK +G +Y
Sbjct: 432 VAMAVAQLIMSVGHIFFAYGWPGAMYIGTLLIGLGYGAHWAIVPATASELFGLKKFGALY 491
Query: 364 NILILNLPLGSFLFSGLLAGILYDMEA 444
N L L P GS +FSG++A +YD EA
Sbjct: 492 NFLTLANPAGSLVFSGMIASSIYDREA 518
>gi|4063746|gb|AAC98454.1| (AC005851) nodulin-like protein [Arabidopsis
thaliana]
Length = 577
Frame 1 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | 577
0 150 300 450
Plus Strand HSPs:
Score = 357 (125.7 bits), Expect = 3.1e-31, P = 3.1e-31
Identities = 78/187 (41%), Positives = 113/187 (60%), Frame = +1
Query: 7 CGVGTGLAVMNNMGQIGLALGYSD--VSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATPR 180
CG+G+ L ++N+GQIG +LGY + VS FVSL SIW +FGR+ SG VS + + K PR
Sbjct: 345 CGLGSSLTAVDNLGQIGESLGYPNHTVSSFVSLVSIWNYFGRVFSGFVSEYLLAKYKLPR 404
Query: 181 PLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGLI 360
PL +L G++L+A +PGS+YI S+++G +G +L + SELFGLKYY +
Sbjct: 405 PLMMTLVLLLSCAGHLLIAFPVPGSVYIASILMGFSFGAQLPLLFAIISELFGLKYYSTL 464
Query: 361 YNILILNLPLGSFLFSGLLAGILYDMEAT---TTVG-RRQHL-----YWSSCYRLXFIIM 513
+N L PLGS++ + + G+LYD EA T G R+ + S CY+L F+I+
Sbjct: 465 FNCGQLASPLGSYILNVRVTGMLYDKEALKQLTARGLTRKDVKDLTCLGSQCYKLPFLIL 524
Query: 514 AVPCVVG 534
A G
Sbjct: 525 AAVTFFG 531
>gi|8778273|gb|AAF79282.1|AC068602_5 (AC068602) F14D16.8 [Arabidopsis thaliana]
Length = 526
Frame 1 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | 526
0 150 300 450
Plus Strand HSPs:
Score = 353 (124.3 bits), Expect = 4.1e-31, P = 4.1e-31
Identities = 68/178 (38%), Positives = 110/178 (61%), Frame = +1
Query: 4 LCGVGTGLAVMNNMGQIGLALGYSDVSL--FVSLTSIWGFFGRIVSGSVSXHFIKKAATP 177
+CG+G+G++ +NN+ QIG +L Y+ V + ++L +IW F GR G VS + + P
Sbjct: 325 ICGMGSGISTINNIRQIGESLRYTSVEINSLLALWNIWNFIGRFGGGYVSDWLLHRKGWP 384
Query: 178 RPLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGL 357
RPL A + M +G++++A G+LY GS++VGICYG + ++ SELFG+K+ G
Sbjct: 385 RPLLMATTLGTMTIGHLIIASGFQGNLYPGSIIVGICYGSQWSLMPTITSELFGVKHMGT 444
Query: 358 IYNILILNLPLGSFLFSGLLAGILYDMEATTTVGRRQHLYWSSCYRLXFIIMAVPCVVGF 537
IYN + + P+GS++FS L G +YD T +G Y C+RL ++++A +GF
Sbjct: 445 IYNTISIASPMGSYIFSVRLIGYIYDR---TIIGEGNTCYGPHCFRLAYVVIASVAFLGF 501
>gi|3329366|gb|AAC39500.1| (AF031243) nodule-specific protein Nlj70 [Lotus
japonicus]
Length = 575
Frame 1 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | 575
0 150 300 450
Plus Strand HSPs:
Score = 343 (120.7 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 73/188 (38%), Positives = 103/188 (54%), Frame = +1
Query: 4 LCGVGTGLAVMNNMGQIGLALGYSD--VSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATP 177
+CG G+ L V NN+ QIG +LGY ++ FVSL SIW F G+I G +S I K P
Sbjct: 348 VCGFGSNLTVYNNLSQIGKSLGYPSYTITTFVSLMSIWIFLGKIAQGVLSEFMITKLKLP 407
Query: 178 RPLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGL 357
RPL +L +G++L+A +P LY S+ +G C G I SELFGLK+Y
Sbjct: 408 RPLMFTIVHVLSCIGHLLIAFNVPNGLYAASIFIGFCLGASWPIINSLISELFGLKHYST 467
Query: 358 IYNILILNLPLGSFLFSGLLAGILYDMEATTTV---------GRRQHLYWSSCYRLXFII 510
+YN+ + P+GS+L + +AG LYD EA + G + S CY+L +II
Sbjct: 468 LYNVGTVASPIGSYLLNVKVAGYLYDREARRQMAALGLQRKPGEELNCNGSDCYKLAYII 527
Query: 511 MAVPCVVG 534
+ C+ G
Sbjct: 528 ITAVCLFG 535
>gi|8777386|dbj|BAA96976.1| (AB023037) nodulin-like protein [Arabidopsis
thaliana] >gi|9758761|dbj|BAB09137.1| (AB025619) nodulin-like
protein [Arabidopsis thaliana]
Length = 540
Frame 1 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | 540
0 150 300 450
Plus Strand HSPs:
Score = 339 (119.3 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 70/179 (39%), Positives = 110/179 (61%), Frame = +1
Query: 10 GVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATPRPLW 189
GVG+G+ +++N+GQI +LGYS+ +FVSL SI F GR+ G S I+K + PR L
Sbjct: 336 GVGSGITIIDNLGQICYSLGYSNTKIFVSLISISNFLGRVAGGYFSELIIRKLSLPRTLA 395
Query: 190 NAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGLIYNI 369
+ Q +M++G I A+ PG +Y+ ++V+G+ YG AI + S++FGLK +G +YN
Sbjct: 396 MSVVQAIMSLGLIYYAIDWPGKIYVVTIVIGMGYGAHWAIAPASVSDIFGLKSFGSLYNF 455
Query: 370 LILNLPLGSFLFSGLLAGILYDMEATTTVG---RRQHLYW--SSCYRLXFIIMAVPCVV 531
I LP+GSF+FSG++A +YD A G + L S CY + +M++ C++
Sbjct: 456 QITALPIGSFVFSGVIASNIYDYYARKQAGPTTETESLVCTGSVCYSVTCSLMSMLCLM 514
>gi|7485467|pir||T02323 hypothetical protein F13P17.19 - Arabidopsis thaliana
>gi|3337366|gb|AAC27411.1| (AC004481) nodulin-like protein
[Arabidopsis thaliana]
Length = 2301
Frame 1 hits (HSPs): ____ _____
__________________________________________________
Database sequence: | | | | | | 2301
0 500 1000 1500 2000
Plus Strand HSPs:
Score = 343 (120.7 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 73/177 (41%), Positives = 110/177 (62%), Frame = +1
Query: 4 LCGVGTGLAVMNNMGQIGLALGYSDVSL--FVSLTSIWGFFGRIVSGSVSXHFIKKAATP 177
LCG+G+G A +NNM QIG +L YS V L VSL SIW F GR +G VS F+ K + P
Sbjct: 939 LCGMGSGFATVNNMRQIGESLRYSSVQLNSLVSLWSIWNFLGRFGAGYVSDTFLHKHSWP 998
Query: 178 RPLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGL 357
RP++ A + +MA+G+I++A + GSLY GSV++G+ YG + ++ SE+FG+++ G
Sbjct: 999 RPIFMAITLGVMAIGHIIVASGVQGSLYAGSVLIGMAYGSQWSLMPTITSEIFGIRHMGT 1058
Query: 358 IYNILILNLPLGSFLFSGLLAGILYDMEATTTVGRRQHLYWSSCYRLXFIIMAVPCVVG 534
IY + + P+GS++ S + G YD A+ + S C+R F+IMA + G
Sbjct: 1059 IYFTISIAGPIGSYILSVKVIGYFYDKVASED---DNSCFGSQCFRTSFMIMASVALFG 1114
Score = 341 (120.0 bits), Expect = 3.0e-28, P = 3.0e-28
Identities = 73/177 (41%), Positives = 112/177 (63%), Frame = +1
Query: 4 LCGVGTGLAVMNNMGQIGLALGYSDVSL--FVSLTSIWGFFGRIVSGSVSXHFIKKAATP 177
+CG+G+GLA +NN+ Q+G +L YS V L VSL SIW F GR SG +S ++ P
Sbjct: 325 ICGMGSGLATINNIRQMGESLRYSTVQLNSLVSLWSIWNFLGRFGSGYISDTYLHSHGWP 384
Query: 178 RPLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGL 357
RP++ A + LMA+G+I++A + GSLYIGS++VG+ YG + ++ SE+FG+ + G
Sbjct: 385 RPVFMAITLGLMAIGHIVMASGLLGSLYIGSLLVGLAYGSQWSLMPTITSEIFGVLHMGT 444
Query: 358 IYNILILNLPLGSFLFSGLLAGILYDMEATTTVGRRQH-LYWSSCYRLXFIIMAVPCVVG 534
I+ + + P+GS+ FS + G LYD A+ H Y + C+R F+IMA ++G
Sbjct: 445 IFYTISIASPVGSYFFSVKVIGYLYDKVASED----DHSCYGNHCFRTSFLIMAAMALLG 500
>gi|2347195|gb|AAC16934.1| (AC002338) hypothetical protein [Arabidopsis
thaliana]
Length = 500
Frame 1 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | 500
0 150 300 450
Plus Strand HSPs:
Score = 253 (89.1 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 57/177 (32%), Positives = 97/177 (54%), Frame = +1
Query: 1 FLCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATPR 180
+L G GL NN+GQI + G + S V+L+S +GFFGR++ + F + P
Sbjct: 305 YLFGPTVGLVFTNNLGQIAESRGSTATSSLVALSSSFGFFGRLLPSLLDYFFSRNKYMPS 364
Query: 181 -PLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGL 357
P+ A S + M ++LL + +LYIG+ ++GI G +++V +ELFG K++G+
Sbjct: 365 SPVSMAGSLVAMVASFLLLLIDSDIALYIGTAMIGIFSGALTSLSVTMTAELFGTKHFGV 424
Query: 358 IYNILILNLPLGSFLFSGLLAGILYDMEATTTVGRRQHLYWSSCYRLXFIIMAVPCVV 531
+NI++ ++PLGSF F GLLA +Y + G + C++ + + C +
Sbjct: 425 NHNIVVGSIPLGSFSF-GLLAAKIY-RDGAALYGDDGKCFGMHCFQTTLVFWGMLCSI 480
>gi|7486078|pir||T05205 hypothetical protein F24J7.10 - Arabidopsis thaliana
(fragment)
Length = 430
Frame 1 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | 430
0 150 300
Plus Strand HSPs:
Score = 211 (74.3 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 59/173 (34%), Positives = 86/173 (49%), Frame = +1
Query: 1 FLCGVGTGLAVMNNMGQIGLALGYS-DVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATP 177
+ CG GL NN+GQI +LG S + + V+L S + FFGR++S + + K
Sbjct: 219 YFCGGTIGLVYSNNLGQIAQSLGQSSNTTTLVTLYSAFSFFGRLLSATPD-YIRAKVYFA 277
Query: 178 RPLWNAASQILMAVGYILLAMAMPGS-LYIGSVVVGICYGVRLAITVPTASELFGLKYYG 354
R W A + + LLA + S L G+ ++G+ G A V SELFG G
Sbjct: 278 RTGWLAIALLPTPFALFLLASSGTASALQAGTALMGLSSGFIFAAAVSITSELFGPNSVG 337
Query: 355 LIYNILILNLPLGSFLFSGLLAGILYDMEATT-TVGRRQH---LYWSSCYRLXFI 507
+ +NILI N+P+GS ++ G LA ++YD T T CY L F+
Sbjct: 338 VNHNILITNIPIGSLIY-GFLAALVYDSHGFTGTKSMTSESVVCMGRDCYYLTFV 391
>gi|7487718|pir||T05828 hypothetical protein T5K18.230 - Arabidopsis thaliana
>gi|3080375|emb|CAA18632.1| (AL022580) putative protein
[Arabidopsis thaliana] >gi|7268740|emb|CAB78947.1| (AL161550)
putative protein [Arabidopsis thaliana]
Length = 527
Frame 1 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | 527
0 150 300 450
Plus Strand HSPs:
Score = 211 (74.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 59/173 (34%), Positives = 86/173 (49%), Frame = +1
Query: 1 FLCGVGTGLAVMNNMGQIGLALGYS-DVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATP 177
+ CG GL NN+GQI +LG S + + V+L S + FFGR++S + + K
Sbjct: 316 YFCGGTIGLVYSNNLGQIAQSLGQSSNTTTLVTLYSAFSFFGRLLSATPD-YIRAKVYFA 374
Query: 178 RPLWNAASQILMAVGYILLAMAMPGS-LYIGSVVVGICYGVRLAITVPTASELFGLKYYG 354
R W A + + LLA + S L G+ ++G+ G A V SELFG G
Sbjct: 375 RTGWLAIALLPTPFALFLLASSGTASALQAGTALMGLSSGFIFAAAVSITSELFGPNSVG 434
Query: 355 LIYNILILNLPLGSFLFSGLLAGILYDMEATT-TVGRRQH---LYWSSCYRLXFI 507
+ +NILI N+P+GS ++ G LA ++YD T T CY L F+
Sbjct: 435 VNHNILITNIPIGSLIY-GFLAALVYDSHGFTGTKSMTSESVVCMGRDCYYLTFV 488
>gi|6016721|gb|AAF01547.1|AC009325_17 (AC009325) hypothetical protein
[Arabidopsis thaliana]
Length = 569
Frame 1 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | 569
0 150 300 450
Plus Strand HSPs:
Score = 208 (73.2 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 61/188 (32%), Positives = 92/188 (48%), Frame = +1
Query: 1 FLCGVGTGLAVMNNMGQIGLALGYS--DVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAAT 174
+ CG GL NN+GQI +LG S + V+L S + F GR++S + K
Sbjct: 360 YFCGGTIGLVYSNNLGQIAQSLGQSSSNAKSLVTLFSAFSFLGRLLSSAPDFTRKKLKYL 419
Query: 175 PRPLWNAASQILMAVGYILLAMA----MPGSLYIGSVVVGICYGVRLAITVPTASELFGL 342
R W S + + + +LA + L + + ++G+ G A V SELFG
Sbjct: 420 TRTGWFTISLLPTPLAFFILAYSPKTNQTALLEVATALIGLSSGFVFAAAVSITSELFGR 479
Query: 343 KYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTVGRRQHLYWS------SCYRLXF 504
G+ NILI N+P+GS LF G +AG +YD A+ +GR+ + S CY + F
Sbjct: 480 NSVGVNQNILITNIPIGS-LFYGYMAGSVYDTNAS--LGRKSVVADSVVCVGRKCYFVTF 536
Query: 505 IIMAVPCVVGF 537
+ V+GF
Sbjct: 537 LFWGCLSVLGF 547
>gi|12322532|gb|AAG51261.1|AC027135_2 (AC027135) hypothetical protein
[Arabidopsis thaliana]
Length = 546
Frame 1 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | 546
0 150 300 450
Plus Strand HSPs:
Score = 202 (71.1 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 49/152 (32%), Positives = 83/152 (54%), Frame = +1
Query: 1 FLCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATPR 180
+ CG GL NN+GQI +LG + +L V++ S + FFGR++S + K+ R
Sbjct: 331 YFCGGTIGLVYSNNLGQIAQSLGQNSTTL-VTIYSSFSFFGRLLSAAPDFMH-KRFRLTR 388
Query: 181 PLWNAASQILMAVGYILLAMA--MPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYG 354
W A + + + + LLA++ +L + ++G+ G A V S+LFG G
Sbjct: 389 TGWFAIALLPTPIAFFLLAVSSSQQTALQTATALIGLSSGFIFAAAVSITSDLFGPNSVG 448
Query: 355 LIYNILILNLPLGSFLFSGLLAGILYDMEATTTV 456
+ +NILI N+P+GS L+ G +A +Y+ A+ +
Sbjct: 449 VNHNILITNIPIGSLLY-GYIAASIYEANASPDI 481
>gi|1532169|gb|AAB07879.1| (U63815) similar to a E. coli hypothetical protein
F402 encoded by GenBank Accession Number S47768 [Arabidopsis
thaliana]
Length = 481
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | 481
0 150 300 450
Plus Strand HSPs:
Score = 128 (45.1 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 25/57 (43%), Positives = 36/57 (63%), Frame = +1
Query: 4 LCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAAT 174
L G G+GL V++N+GQ+ +LGY + +FVS+ SIW F GRI G S ++ T
Sbjct: 377 LLGSGSGLTVIDNLGQMSQSLGYDNTHVFVSMISIWNFLGRIGGGYFSELIVRYDTT 433
>gi|11497979 ref|NP_069203.1| oxalate/formate antiporter (oxlT-2)
[Archaeoglobus fulgidus] >gi|7448836|pir||G69295 oxalate/formate
antiporter (oxlT-2) homolog - Archaeoglobus fulgidus
>gi|2650264|gb|AAB90866.1| (AE001079) oxalate/formate antiporter
(oxlT-2) [Archaeoglobus fulgidus]
Length = 397
Frame 1 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | 397
0 150 300
Plus Strand HSPs:
Score = 103 (36.3 bits), Expect = 0.027, P = 0.026
Identities = 34/139 (24%), Positives = 68/139 (48%), Frame = +1
Query: 22 GLAVMNNMGQIGLALGYSDVSL-F-VSLTSIWGFFGRIVSGSVSXHFIKKAATPRPLWNA 195
GL V+ ++ G ++ F VS+ S+ GR +G++S I +A T L+
Sbjct: 234 GLMVIGHIAPYAQERGLEPLAAAFAVSILSVANAVGRPGAGALSDK-IGRAMTMFVLFLI 292
Query: 196 ASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGLIYNILI 375
L+A ++ L + ++YI + ++G YG ++ + FG K G+ Y ++
Sbjct: 293 QGITLIAFPHVALTLI---TIYICAAIIGFNYGANFSLFPSATGDFFGTKNLGVNYGLVF 349
Query: 376 LNLPLGSFLFSGLLAGILYDM 438
+ +G L ++AG ++D+
Sbjct: 350 TSYGVGG-LVGPIMAGYVFDV 369
>gi|11351469|pir||F83484 probable MFS transporter PA1286 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9947221|gb|AAG04675.1|AE004558_4 (AE004558) probable MFS
transporter [Pseudomonas aeruginosa]
Length = 399
Frame 1 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | 399
0 150 300
Plus Strand HSPs:
Score = 102 (35.9 bits), Expect = 0.035, P = 0.035
Identities = 35/115 (30%), Positives = 61/115 (53%), Frame = +1
Query: 91 VSLTSIWGFFGRIVSGSVSXHFIKKAATPRPLWNAASQILMAVGYILLAMAMPGSLYIGS 270
++L ++ FG ++G + + K PR L A ++ V I+L + +P S+Y +
Sbjct: 249 LALVGLFNVFGTYIAGWLGGRWSK----PRLL--TALYLVRGV-VIVLFLWLPLSVY-SA 300
Query: 271 VVVGICYGVRLAITVP----TASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYD 435
G+ G+ TVP T + LFG++ ++ I+ L LG+FL G L G++YD
Sbjct: 301 YAFGVAMGLLWLSTVPLTNGTVATLFGVRNLSMLGGIVFLFHQLGAFL-GGWLGGVVYD 358
>gi|10732851|gb|AAG18633.1| (AY007504) PblT [Streptococcus mitis]
Length = 399
Frame 1 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | 399
0 150 300
Plus Strand HSPs:
Score = 102 (35.9 bits), Expect = 0.035, P = 0.035
Identities = 37/133 (27%), Positives = 62/133 (46%), Frame = +1
Query: 1 FLCGVGTGLAVMNNMGQIGLAL-GYS--DVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAA 171
F G +GL + + IG ++ G S +L+VSL SI GR + GS+S K
Sbjct: 226 FFVGAFSGLMIASQASPIGQSMFGLSAGTAALYVSLYSIANSSGRFIWGSLSD----KIG 281
Query: 172 TPRPLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYY 351
+ L S I++A+ + + G +G + +GIC+G + + E +G
Sbjct: 282 RSKTLLIIYSVIVLALFSLTIVPGQFG-FTLGIIGLGICFGGVMGVFPSIVMENYGPANQ 340
Query: 352 GLIYNILILNLPLGSF 399
G+ Y I+ L +F
Sbjct: 341 GVNYGIVFTGYSLAAF 356
>gi|11349425|pir||E83385 hypothetical protein PA2091 [imported] - Pseudomonas
aeruginosa (strain PAO1) >gi|9948103|gb|AAG05479.1|AE004636_10
(AE004636) hypothetical protein [Pseudomonas aeruginosa]
Length = 427
Frame 1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | 427
0 150 300
Plus Strand HSPs:
Score = 101 (35.6 bits), Expect = 0.053, P = 0.051
Identities = 36/113 (31%), Positives = 56/113 (49%), Frame = +1
Query: 97 LTSIWGFFGRIVSGSVSXHFIKKAATPRPLWNAASQILMAVGYILLAMAMPGSLYIGSV- 273
L ++W G IVS + + + TPR A +L A+G +LL + P +L G+V
Sbjct: 275 LAALW--VGMIVSQPALGYLLDRYDTPRIALPFA--LLAALGLLLLLLGGPPALLWGAVF 330
Query: 274 VVGICYGVRLAITVPTASELFGLKYYGLIY-NILILNLPLGSFLFSGLLAGILYD 435
++G+ G T S FGL+++ +IY +I + L S LL G YD
Sbjct: 331 LIGLGAGGETGTTQYFVSRYFGLRHFSVIYGSIQPFTFAIAISLGSWLL-GYFYD 384
>gi|6320149 ref|NP_010229.1| Ydl054cp [Saccharomyces cerevisiae]
>gi|2132421|pir||S67589 probable membrane protein YDL054c - yeast
(Saccharomyces cerevisiae) >gi|1431051|emb|CAA98616.1| (Z74102) ORF
YDL054c [Saccharomyces cerevisiae]
Length = 486
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | 486
0 150 300 450
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 0.083, P = 0.080
Identities = 50/176 (28%), Positives = 77/176 (43%), Frame = +1
Query: 40 NMGQIGLALGYSDV-SLFVSLTSIWGF---FGRIVSGSVSXHFIKKAATPRPLWNAASQI 207
NMG + L D +L L S + F R+++G V+ F KK + + + +
Sbjct: 301 NMGSLTNLLVQLDAPTLSTKLLSTYALSSTFTRLLTGIVADFFAKKKISIKWILLTFLSL 360
Query: 208 LMAVGYILLAM---AMPGSLYIGSVVVGICYGVRLAITVPTASEL-FGLKYYGLIYNILI 375
+ LL M A P L +VGI YG L PT L +G + +G +Y L+
Sbjct: 361 GVCAQLFLLKMTSSASPWGLVPTGSLVGIVYG-GLFTVYPTLVLLVWGERSFGTVYGSLL 419
Query: 376 LNLPLGSFLFSGLLAGILYDMEATTTVGR-RQHLYWSSCYR---LXFIIMAVPCVVGF 537
+ +GS +F L A YD + G R S+ Y+ + F++ AV V F
Sbjct: 420 IAPAIGSMIFCMLYAKF-YDSRCMSGGGDLRNPSCISAVYKYSSIAFVVSAVLSAVVF 476
>gi|11355956|pir||G82445 probable oxalate/formate antiporter VCA0554 [imported]
- Vibrio cholerae (group O1 strain N16961)
>gi|9657962|gb|AAF96456.1| (AE004386) oxalate/formate antiporter,
putative [Vibrio cholerae]
Length = 410
Frame 1 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | 410
0 150 300
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.20, P = 0.18
Identities = 33/131 (25%), Positives = 57/131 (43%), Frame = +1
Query: 1 FLCGVGTGLAVMNNMGQIG-LALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATP 177
+ GL ++ N+ I + + S+ +I+ GR+ +G +S K
Sbjct: 231 YALAASVGLMIIGNITNIASVQANLPNAVYLASILAIFNSGGRVAAGILSD----KIGGV 286
Query: 178 RPLWNAASQILMAVGYILLA-MAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYG 354
R L A +L +L A +L IG+ + + YG LA+ +E +GLK YG
Sbjct: 287 RTLLLAF--LLQGGNMVLFATFDSEFTLIIGTAIAAVGYGTLLAVFPSITAEFYGLKNYG 344
Query: 355 LIYNILILNLPLG 393
Y +L + +G
Sbjct: 345 TNYGVLYTSWGIG 357
>gi|7302438|gb|AAF57523.1| (AE003795) CG15126 gene product [Drosophila
melanogaster]
Length = 53
Frame -1 hits (HSPs): _____________________________________
__________________________________________________
Database sequence: | | | | 53
0 20 40
Minus Strand HSPs:
Score = 47 (16.5 bits), Expect = 0.80, Sum P(2) = 0.55
Identities = 11/30 (36%), Positives = 15/30 (50%), Frame = -1
Query: 315 HSNGKPH---PVAYANHNGP-YVKGTWHSH 238
H +G PH P + H+GP + G H H
Sbjct: 11 HGHGGPHHGGPPHHGGHHGPPHHHGPPHHH 40
Score = 38 (13.4 bits), Expect = 0.80, Sum P(2) = 0.55
Identities = 6/11 (54%), Positives = 8/11 (72%), Frame = -1
Query: 468 LPPPYGGSRLH 436
+PPP+GG H
Sbjct: 1 MPPPHGGPGGH 11
>gi|544446|sp|Q01440|GTR1_LEIDO MEMBRANE TRANSPORTER D1 >gi|477241|pir||A48442
membrane transport protein (clone D1.SH) - Leishmania donovani
>gi|159302|gb|AAA29230.1| (M85072) D1 transporter [Leishmania
donovani] >gi|1583317|prf||2120373A myo-inositol/H symporter
[Leishmania donovani]
Length = 547
Frame 1 hits (HSPs): _____________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 547
0 150 300 450
__________________
Annotated Domains:
BLOCKS BL00216A: Sugar transport proteins. 13..24
BLOCKS BL00216B: Sugar transport proteins. 97..146
DOMO DM00032: SUGARTRANSPORTPROTEINS 1..75
DOMO DM00135: SUGARTRANSPORTPROTEINS 101..433
Entrez Transmembrane region: POTENTIAL. 3..25
Entrez Transmembrane region: POTENTIAL. 44..64
Entrez Transmembrane region: POTENTIAL. 79..99
Entrez Transmembrane region: POTENTIAL. 102..122
Entrez Transmembrane region: POTENTIAL. 137..157
Entrez Transmembrane region: POTENTIAL. 165..185
Entrez Transmembrane region: POTENTIAL. 246..266
Entrez Transmembrane region: POTENTIAL. 277..297
Entrez Transmembrane region: POTENTIAL. 309..329
Entrez Transmembrane region: POTENTIAL. 340..360
Entrez Transmembrane region: POTENTIAL. 386..406
Entrez Transmembrane region: POTENTIAL. 408..428
PFAM sugar_tr: Sugar (and other) transporter 5..442
PRINTS SUGRTRNSPORT1: Sugar transporter motif I 13..23
PRINTS SUGRTRNSPORT2: Sugar transporter motif I 98..117
PRINTS SUGRTRNSPORT3: Sugar transporter motif I 250..260
PRINTS SUGRTRNSPORT4: Sugar transporter motif I 343..364
PRINTS SUGRTRNSPORT5: Sugar transporter motif V 366..378
PRODOM PD063482: GTR1_LEIDO 1..40
PRODOM PD000082: GTR1(7) GTR3(6) GTR4(4) 42..100
PRODOM PD000916: GTR1(7) GTR3(6) GTR4(4) 114..196
PRODOM PD073357: GTR1_LEIDO 198..229
PRODOM PD000712: GTR1(7) GTR3(6) GTR2(4) 231..270
PRODOM PD000537: GTR1(7) GTR3(6) GTR2(5) 288..327
PRODOM PD000372: GTR1(7) GTR3(6) GTR2(5) 360..447
PRODOM PD075537: GTR1_LEIDO 449..546
PROSITE SUGAR_TRANSPORT_2: Sugar transport prote 103..128
__________________
Plus Strand HSPs:
Score = 91 (32.0 bits), Expect = 1.2, P = 0.69
Identities = 43/140 (30%), Positives = 71/140 (50%), Frame = +1
Query: 1 FLCGVGTGLAVMNNMGQIGLALGYSDVS----LFVSLTSIWGFFGRIVSGSVSXHFIKKA 168
FL G TG+ + + Q+ G+S+ S L V++ F G +SG +S F +
Sbjct: 14 FLFGYDTGV-INAALFQMKDHFGFSEHSWQYALIVAIAIAGAFVGAFISGFISAAFGR-- 70
Query: 169 ATPRPLWNAASQILMAVGYILLAMAMPGSLYIGS-VVVGICYGVRLAITVPT-ASELFGL 342
RP A + L +G +L+ A + + S V+VG+ G+ A T+P +E+
Sbjct: 71 ---RPCI-AVADALFVIGSVLMGAAPNVEVVLVSRVIVGLAIGISSA-TIPVYLAEVTSP 125
Query: 343 KYYGLIYNILILNLPL--GSFLFSGLLA 420
K+ G I++ NL L G F+ +G A
Sbjct: 126 KHRGA--TIVLNNLFLTGGQFVAAGFTA 151
>gi|12519356|gb|AAG59522.1|AE005665_4 (AE005665) putative transport protein
[Escherichia coli O157:H7]
Length = 410
Frame 1 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | 410
0 150 300
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 1.4, P = 0.74
Identities = 36/134 (26%), Positives = 62/134 (46%), Frame = +1
Query: 118 FGR-IVSGSVSXHFIKKAATPRPLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYG 294
FG IV+ ++ F+K PR +W A L+ + +++ + +++ SV+ Y
Sbjct: 261 FGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIIGNLLSPHVWLWSVLGTSLYA 320
Query: 295 VRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTVGRRQHL 474
+ + PT LF + L N NLP G+ + + L IL M + +GR
Sbjct: 321 FGIGLIFPT---LFR---FTLFSN----NLPKGT-VSASLNMVILMVMSVSVEIGR---W 366
Query: 475 YWSSCYRLXFIIMAV 519
W + RL F ++AV
Sbjct: 367 LWFNGGRLPFHLLAV 381
>gi|5091611|gb|AAD39600.1|AC007858_14 (AC007858) Similar to gb|U43629 integral
membrane protein from Beta vulgaris and is a member of the sugar
transporter family PF|00083. ES [Oryza sativa]
Length = 501
Frame 1 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | 501
0 150 300 450
Plus Strand HSPs:
Score = 90 (31.7 bits), Expect = 1.4, P = 0.75
Identities = 40/153 (26%), Positives = 76/153 (49%), Frame = +1
Query: 1 FLCGVG--TGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAAT 174
F CG T A+++++G L S+ SLF SL+++ G I SG ++ + +K +
Sbjct: 78 FTCGFSSPTQDAIISDLG-----LTLSEFSLFGSLSNVGAMVGAIASGQIAEYIGRKGS- 131
Query: 175 PRPLWNAASQILMAVGYILLAMAMPGS-LYIGSVVVGICYGVRLAITVPT-ASELFGLKY 348
L AA I +G++ ++ A S L++G ++ G GV ++ VP +E+
Sbjct: 132 ---LMIAA--IPNIIGWLAISFAKDSSFLFMGRLLEGFGVGV-ISYVVPVYIAEIAPQTM 185
Query: 349 YGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTVG 459
G + ++ L++ +G L L G+ + +G
Sbjct: 186 RGALGSVNQLSVTIGILL--AYLLGMFVPWRILSVLG 220
>gi|11349613|pir||G83322 hypothetical protein PA2589 [imported] - Pseudomonas
aeruginosa (strain PAO1) >gi|9948652|gb|AAG05977.1|AE004687_6
(AE004687) hypothetical protein [Pseudomonas aeruginosa]
Length = 404
Frame 1 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | 404
0 150 300
Plus Strand HSPs:
Score = 88 (31.0 bits), Expect = 1.7, P = 0.82
Identities = 30/114 (26%), Positives = 56/114 (49%), Frame = +1
Query: 94 SLTSIWGFFGRIVSGSVSXHFIKKAATPRPLWNAASQILMAVGYILLAMAMPGSLYIGSV 273
+L+++W G ++S + + + ATPR A ++ + + L+ P L++
Sbjct: 260 ALSALW--VGMMLSQPLMGWLLDRVATPRVALPFALAAVLGMAWFLVGDT-PSGLWLAVF 316
Query: 274 VVGICYGVRLAITVPTASELFGLKYYGLIYNIL-----ILNLPLGSFLFSGLLAGILYD 435
+VG+ G T FGL+ +G+IY + L++ LG++L G LYD
Sbjct: 317 LVGLGGGGESGTTKYLLMRYFGLRSFGVIYGSIQPFTFALSISLGAYLL-----GWLYD 370
>gi|140043|sp|P05715|Y38K_THETE HYPOTHETICAL 38 KD PROTEIN IN 23S RNA OPERON
>gi|81094|pir||S00656 hypothetical protein - Thermoproteus tenax
>gi|48270|emb|CAA29514.1| (X06157) open reading frame (AA 1 - 373)
[Thermoproteus tenax]
Length = 373
Frame 1 hits (HSPs): _____________
Annotated Domains: ______________________________________________
__________________________________________________
Database sequence: | | | | 373
0 150 300
__________________
Annotated Domains:
PRODOM PD209564: Y38K_THETE 1..123
PRODOM PD012892: O80784(2) 125..307
PRODOM PD107672: Y38K_THETE 309..339
PROSITE LEUCINE_ZIPPER: Leucine zipper pattern. 76..97
__________________
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 2.1, P = 0.87
Identities = 33/95 (34%), Positives = 49/95 (51%), Frame = +1
Query: 175 PRPLWNAASQILMAVGYILLAMAM-PGSLYI----GSVVVGICYGVRLAITVPTASELFG 339
PR + A S +L A+G+I A+A P LY+ GS G+ YG+ + V + G
Sbjct: 70 PRGV-GALSAVLSALGFIGAALAPGPALLYLAWGLGSAGEGVLYGIAFNLAVKWYQDKLG 128
Query: 340 LKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTVG 459
L GL+ L LGS + + L+A + EAT +G
Sbjct: 129 LAT-GLVS----LGFGLGSAVANPLIASVGNYREATLAIG 163
>gi|11499136 ref|NP_070370.1| conserved hypothetical protein [Archaeoglobus
fulgidus] >gi|7430263|pir||D69442 conserved hypothetical protein
AF1541 - Archaeoglobus fulgidus >gi|2649020|gb|AAB89705.1|
(AE000996) conserved hypothetical protein [Archaeoglobus fulgidus]
Length = 372
Frame 1 hits (HSPs): ____ ____________
__________________________________________________
Database sequence: | | | | 372
0 150 300
Plus Strand HSPs:
Score = 78 (27.5 bits), Expect = 2.6, Sum P(2) = 0.92
Identities = 27/78 (34%), Positives = 39/78 (50%), Frame = +1
Query: 226 ILLAM--AMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLG-S 396
ILLA+ ++ G L +G G G+ AIT ++L G+K Y + N G +
Sbjct: 276 ILLALHPSIIGVL-VGVAAWGAVMGMHEAITRAAVADLTGVKKRSTAYGVF--NTVFGVA 332
Query: 397 FLFSGLLAGILYDMEATTTVG 459
L G + G LYD+ A VG
Sbjct: 333 MLAGGAVLGYLYDISAALLVG 353
Score = 44 (15.5 bits), Expect = 2.6, Sum P(2) = 0.92
Identities = 8/20 (40%), Positives = 11/20 (55%), Frame = +1
Query: 10 GVGTGLAVMNNMGQIGLALG 69
G GTG + M Q+G +G
Sbjct: 127 GRGTGFGIHEAMDQVGAVIG 146
>gi|12518279|gb|AAG58696.1|AE005581_8 (AE005581) putative resistance protein
[Escherichia coli O157:H7]
Length = 400
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | 400
0 150 300
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 3.0, P = 0.95
Identities = 40/142 (28%), Positives = 65/142 (45%), Frame = +1
Query: 1 FLCGVGTGLAVMNNMGQIGLALGYSDV---SLFVSLTSIWGFFGRIVSGSVSXHFIKKAA 171
FL +GL V+ I +L + DV + V++ SI GR+V G +S K A
Sbjct: 223 FLTACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSD----KIA 278
Query: 172 TPRPLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITV-PT-ASELFGLK 345
R + Q++ VG L A ++ + + + + ITV P+ SE FGL
Sbjct: 279 RIRVI--TIGQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFGLN 336
Query: 346 YYGLIYNILILNLPLGSFLFSGLLAGI 426
Y ++ L +GS S ++A +
Sbjct: 337 NLAKNYGVIYLGFGIGSICGS-IIASL 362
>gi|586703|sp|P37662|YHJX_ECOLI HYPOTHETICAL 43.0 KD PROTEIN IN PROK-TAG
INTERGENIC REGION (F402) >gi|1073458|pir||S47768 hypothetical 43K
protein (proK-tag intergenic region) - Escherichia coli
>gi|466685|gb|AAB18524.1| (U00039) No definition line found
[Escherichia coli] >gi|1789969|gb|AAC76571.1| (AE000432) putative
resistance protein [Escherichia coli K12]
Length = 402
Frame 1 hits (HSPs): __________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 402
0 150 300
__________________
Annotated Domains:
DOMO DM01410: PTSEIIBDOMAINSCYSTEINEPHOSPHORY 359..401
PRODOM PD070897: O29880(1) YHJX(1) 9..129
PRODOM PD012892: O80784(2) 131..333
PRODOM PD080973: YHJX_ECOLI 335..401
__________________
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 3.0, P = 0.95
Identities = 40/142 (28%), Positives = 65/142 (45%), Frame = +1
Query: 1 FLCGVGTGLAVMNNMGQIGLALGYSDV---SLFVSLTSIWGFFGRIVSGSVSXHFIKKAA 171
FL +GL V+ I +L + DV + V++ SI GR+V G +S K A
Sbjct: 223 FLTACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSD----KIA 278
Query: 172 TPRPLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITV-PT-ASELFGLK 345
R + Q++ VG L A ++ + + + + ITV P+ SE FGL
Sbjct: 279 RIRVI--TIGQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFGLN 336
Query: 346 YYGLIYNILILNLPLGSFLFSGLLAGI 426
Y ++ L +GS S ++A +
Sbjct: 337 NLAKNYGVIYLGFGIGSICGS-IIASL 362
>gi|7107009|gb|AAF36228.1|AF168363_4 (AF168363) oxalate:formate antiporter
[Lactococcus lactis]
Length = 421
Frame 1 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | 421
0 150 300
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 3.2, P = 0.96
Identities = 25/123 (20%), Positives = 56/123 (45%), Frame = +1
Query: 7 CGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATPRPL 186
CG+G ++ + M Q + ++ V + ++ FGR++ ++S +I + AT +
Sbjct: 237 CGIGL-VSAASPMAQSMTGMSVQTAAIMVGIIGLFNGFGRLIWATLSD-YIGRPATFSAI 294
Query: 187 WNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGLIYN 366
+ +L A+ L +P I ++ CYG ++ ++FG K G ++
Sbjct: 295 FILDIVMLSAI----LIFKLPLLFVIALCLLMSCYGAGFSVIPAYLGDVFGTKELGAVHG 350
Query: 367 ILI 375
++
Sbjct: 351 YVL 353
>gi|11096338 ref|NP_068364.1| lymphocyte antigen 116 [Mus musculus]
>gi|9963878|gb|AAG09739.1| (AF230640) chandra protein [Mus
musculus]
Length = 226
Frame 1 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | | | 226
0 50 100 150 200
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 3.4, P = 0.97
Identities = 38/116 (32%), Positives = 55/116 (47%), Frame = +1
Query: 25 LAVMN-NMGQIGLALGYSDVSLFVSL-TSIWGFFGRIVSGSVSXHFIKKAATPRPLWNAA 198
+A++N ++G I L +S++ V L IWG IVSGS+S I TP A
Sbjct: 51 IAIINLSLGIIILTTLFSELPTSVMLMVPIWGSIMFIVSGSLS---IAAGVTPTKCLIVA 107
Query: 199 SQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGLIYNIL 372
S L + +L A A + + SV VG + R T+ GL LI+N+L
Sbjct: 108 SLTLNTITSVLAATA--SIMGVVSVAVGSQFPFRYNYTITK-----GLDVLMLIFNML 158
>gi|1103534|emb|CAA92276.1| (Z68151) IGF2 [Bos taurus]
Length = 72
Frame -3 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | | 72
0 20 40 60
Minus Strand HSPs:
Score = 63 (22.2 bits), Expect = 4.2, P = 0.99
Identities = 14/33 (42%), Positives = 17/33 (51%), Frame = -3
Query: 280 QPQRTLCKGNLA*PLPGVCIPPPSEFERLHSKV 182
+P TLC G L L VC PP F R S++
Sbjct: 5 RPSETLCGGELVDTLQFVCGDPPFYFSRPSSRI 37
>gi|3023776|sp|Q45974|FLIQ_CAUCR FLAGELLAR BIOSYNTHETIC PROTEIN FLIQ
>gi|2120416|pir||I40670 flagellar biosynthesis-specific protein
fliQ - Caulobacter crescentus >gi|535423|gb|AAA66206.1| (U13663)
FliQ [Caulobacter crescentus]
Length = 87
Frame 1 hits (HSPs): _______________________________________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 87
0 20 40 60 80
__________________
Annotated Domains:
Entrez Transmembrane region: POTENTIAL. 18..38
Entrez Transmembrane region: POTENTIAL. 55..75
PFAM Bac_export_3: Bacterial export proteins, 4..79
PRINTS FLGBIOSNFLIQ1: Flagellar biosynthetic pr 18..39
PRINTS FLGBIOSNFLIQ2: Flagellar biosynthetic pr 39..54
PRINTS FLGBIOSNFLIQ3: Flagellar biosynthetic pr 54..76
PRODOM PD052571: FLIQ_CAUCR 1..30
PRODOM PD002710: FLIQ(8) SPAQ(2) YSCS(2) 32..84
__________________
Plus Strand HSPs:
Score = 63 (22.2 bits), Expect = 4.3, P = 0.99
Identities = 20/67 (29%), Positives = 35/67 (52%), Frame = +1
Query: 226 ILLAMAMPGSLYIGSVVVGICYGVRLAIT-VPTASELFGLKYYGLIYNILILNLPLGSFL 402
I L + + + I +VVG+ G+ A+T + A+ ++ K + ++LI LPL L
Sbjct: 14 IWLTLQLCAPVLIVGLVVGVIIGLFQALTQIQEATLVYAPKIVAIFISLLIF-LPLMGSL 72
Query: 403 FSGLLAGI 426
SG + I
Sbjct: 73 MSGFMRQI 80
>gi|7480887|pir||T35005 probable integral membrane transporter - Streptomyces
coelicolor >gi|4007681|emb|CAA22367.1| (AL034443) putative integral
membrane transporter [Streptomyces coelicolor A3(2)]
Length = 446
Frame 1 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | 446
0 150 300
Plus Strand HSPs:
Score = 85 (29.9 bits), Expect = 4.5, P = 0.99
Identities = 47/178 (26%), Positives = 80/178 (44%), Frame = +1
Query: 4 LC-GVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATPR 180
LC V G+ ++ + + +SD S VS+T+ GF + + +++ F +A+
Sbjct: 235 LCMNVTAGIGILEKAAPM-ITDFFSDTSTPVSVTAAAGFVALLSAANMAGRFGWSSASDL 293
Query: 181 PLWNAASQILMAVG---YILLAMAMPGS--LYI-GSVVVGICYGVRLAITVPTASELFGL 342
++ + VG Y L+A+ S L++ ++VV YG A +LFG
Sbjct: 294 IGRKNIYRVYLGVGALMYTLIALFGDSSKPLFVLCALVVVSFYGGGFATAPAYLKDLFGT 353
Query: 343 KYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTVGRRQHLYWSSCYRLXFIIMAVP 522
G I+ L+ L L L+ + D + GR + S+ Y F+IM
Sbjct: 354 YQVGAIHGRLLTAWSLAGVL-GPLIVNWIADHQEEA--GR----HGSALYGTSFLIMIGL 406
Query: 523 CVVGF 537
VVGF
Sbjct: 407 LVVGF 411
>gi|2342687|gb|AAB70413.1| (AC000106) Similar to Beta integral membrane protein
(gb|U43629). EST gb|W43122 comes from this gene. [Arabidopsis
thaliana]
Length = 454
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | || 454
0 150 300 450
Plus Strand HSPs:
Score = 85 (29.9 bits), Expect = 4.6, P = 0.99
Identities = 31/106 (29%), Positives = 48/106 (45%), Frame = +1
Query: 1 FLCGVGTGLAVMNNMGQIG-LALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATP 177
F G G + + G I L L + S+F S+ + G G I SG V+ +K
Sbjct: 42 FCFGCAAGYSSVAQTGIINDLGLSVAQYSMFGSIMTFGGMIGAIFSGKVADLMGRKGT-- 99
Query: 178 RPLWNAASQILMAVGYILLAMAMPGS-LYIGSVVVGICYGVRLAITVP 318
+W A QI G++ +A+A L IG + G G+ L+ +P
Sbjct: 100 --MWFA--QIFCIFGWVAVALAKDSMWLDIGRLSTGFAVGL-LSYVIP 142
>gi|6686827|emb|CAB64733.1| (AJ249968) putative sugar transporter [Arabidopsis
thaliana]
Length = 477
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 477
0 150 300 450
Plus Strand HSPs:
Score = 85 (29.9 bits), Expect = 4.9, P = 0.99
Identities = 31/106 (29%), Positives = 48/106 (45%), Frame = +1
Query: 1 FLCGVGTGLAVMNNMGQIG-LALGYSDVSLFVSLTSIWGFFGRIVSGSVSXHFIKKAATP 177
F G G + + G I L L + S+F S+ + G G I SG V+ +K
Sbjct: 44 FCFGCAAGYSSVAQTGIINDLGLSVAQYSMFGSIMTFGGMIGAIFSGKVADLMGRKGT-- 101
Query: 178 RPLWNAASQILMAVGYILLAMAMPGS-LYIGSVVVGICYGVRLAITVP 318
+W A QI G++ +A+A L IG + G G+ L+ +P
Sbjct: 102 --MWFA--QIFCIFGWVAVALAKDSMWLDIGRLSTGFAVGL-LSYVIP 144
>gi|7484461|pir||T09262 glycine-rich cell wall protein EMB31 - white spruce
>gi|1350526|gb|AAB01565.1| (L47748) glycine-rich cell wall protein
[Picea glauca]
Length = 76
Frame 3 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | 76
0 20 40 60
Plus Strand HSPs:
Score = 61 (21.5 bits), Expect = 7.2, P = 1.0
Identities = 14/28 (50%), Positives = 17/28 (60%), Frame = +3
Query: 12 GWN-GFGGYE*YGSNRFGAG-LFGCVSLCI 95
GW G GG+ G FG G LFGC+ C+
Sbjct: 20 GWGPGPGGF---GPGGFGGGGLFGCIQQCL 46
>gi|2736438|gb|AAB94217.1| (AF039046) contains similarity to drosophilia GCR 1
protein (GB:X71976) [Caenorhabditis elegans]
Length = 68
Frame 3 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | 68
0 20 40 60
Plus Strand HSPs:
Score = 61 (21.5 bits), Expect = 7.2, P = 1.0
Identities = 10/21 (47%), Positives = 14/21 (66%), Frame = +3
Query: 9 WGWNGFGGYE*YGS-NRFGAG 68
WG+N +GGY YG+ +G G
Sbjct: 20 WGYNSYGGYNSYGNYGGYGGG 40
>gi|12699270|gb|AAG35167.1| (AY011243) adenosine A3 receptor [Equus caballus]
Length = 107
Frame 2 hits (HSPs): _________________________________
__________________________________________________
Database sequence: | | | | | | | 107
0 20 40 60 80 100
Plus Strand HSPs:
Score = 70 (24.6 bits), Expect = 8.3, P = 1.0
Identities = 22/72 (30%), Positives = 40/72 (55%), Frame = +2
Query: 314 CQLPRSYSASNIMVLYTTFSFLTFPLALSSFLVFLLAFCMIWRRLPP*GGGNTCXGA-HA 490
CQ RS + + MV ++ F+++ PLA+ S ++L F +I +L G+ GA +
Sbjct: 1 CQF-RSVVSMDYMVYFSFFTWIFIPLAVMS-AIYLDIFFVIRNKLSQNSSGSKETGAFYG 58
Query: 491 TDXYSSSWLYLVL 529
+ ++ L+LVL
Sbjct: 59 REFKTAKSLFLVL 71
>gi|732094|sp|P39386|YJIO_ECOLI HYPOTHETICAL 44.7 KD PROTEIN IN IADA-MCRD
INTERGENIC REGION (F410) >gi|1361103|pir||S56562 hypothetical 44.7K
protein (iadA-mcrD intergenic region) - Escherichia coli
>gi|537178|gb|AAA97233.1| (U14003) ORF_f410 [Escherichia coli]
>gi|1790794|gb|AAC77293.1| (AE000504) putative transport protein
[Escherichia coli K12]
Length = 410
Frame 1 hits (HSPs): ________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 410
0 150 300
__________________
Annotated Domains:
DOMO DM00032: SUGARTRANSPORTPROTEINS 10..81
DOMO DM00072: SUGARTRANSPORTPROTEINS 83..235
Entrez Transmembrane region: POTENTIAL. 12..32
Entrez Transmembrane region: POTENTIAL. 49..69
Entrez Transmembrane region: POTENTIAL. 79..99
Entrez Transmembrane region: POTENTIAL. 104..124
Entrez Transmembrane region: POTENTIAL. 141..161
Entrez Transmembrane region: POTENTIAL. 168..188
Entrez Transmembrane region: POTENTIAL. 217..237
Entrez Transmembrane region: POTENTIAL. 252..272
Entrez Transmembrane region: POTENTIAL. 283..303
Entrez Transmembrane region: POTENTIAL. 308..328
Entrez Transmembrane region: POTENTIAL. 349..369
Entrez Transmembrane region: POTENTIAL. 374..394
PRODOM PD063518: YJIO_ECOLI 1..52
PRODOM PD000082: GTR1(7) GTR3(6) GTR4(4) 54..107
PRODOM PD197937: YJIO_ECOLI 109..135
PRODOM PD000036: TCR(5) NPT1(4) VMT2(3) 137..198
PRODOM PD037523: MDFA(1) YJIO(1) 200..385
PRODOM PD112137: YJIO_ECOLI 387..409
PROSITE SUGAR_TRANSPORT_1: Sugar transport prote 68..83
PROSITE SUGAR_TRANSPORT_1: Sugar transport prote 68..85
__________________
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 9.0, P = 1.0
Identities = 35/134 (26%), Positives = 61/134 (45%), Frame = +1
Query: 118 FGR-IVSGSVSXHFIKKAATPRPLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYG 294
FG IV+ ++ F+K PR +W A L+ + +++ + +++ SV+ Y
Sbjct: 261 FGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLSLLIVGNLLSPHVWLWSVLGTSLYA 320
Query: 295 VRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTVGRRQHL 474
+ + PT LF + L N LP G+ + + L IL M + +GR
Sbjct: 321 FGIGLIFPT---LFR---FTLFSN----KLPKGT-VSASLNMVILMVMSVSVEIGR---W 366
Query: 475 YWSSCYRLXFIIMAV 519
W + RL F ++AV
Sbjct: 367 LWFNGGRLPFHLLAV 381
>gi|1163917|gb|AAB48105.1| (U41818) PhlE [Pseudomonas fluorescens]
Length = 423
Frame 1 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | 423
0 150 300
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 9.4, P = 1.0
Identities = 32/127 (25%), Positives = 58/127 (45%), Frame = +1
Query: 58 LALGYSDVSLFVSLTSI-WGFFGRIVSGSVSXHFIKKAATPRPLWNAASQILMAVGYILL 234
LAL Y D+ L ++ + WG G + V+ I++ T + L + + + + G L
Sbjct: 47 LALDYQDLGLLSAILAFAWG--GSALFMGVA---IRRLGTKQLLVLSITLVSLLAGASAL 101
Query: 235 AMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGL 414
++ G L + ++GIC G +++ E+ GL I P+ L
Sbjct: 102 ISSLMG-LVLLRALMGICEGAFTPVSIIVTDEVSQPCRRGLNLGIQQALFPIIGLCLGPL 160
Query: 415 LAGILYDM 438
LAG+L++M
Sbjct: 161 LAGVLFEM 168
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.96
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.339 0.153 0.601
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.346 0.151 0.581
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.329 0.145 0.452
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.322 0.136 0.436
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.341 0.148 0.471
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.358 0.160 0.616
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 179 177 10. 76 3 12 22 0.11 34
31 0.11 37
+2 0 179 176 10. 75 3 12 22 0.11 34
31 0.11 37
+1 0 180 178 10. 76 3 12 22 0.11 34
31 0.11 37
-1 0 180 177 10. 76 3 12 22 0.11 34
31 0.11 37
-2 0 179 177 10. 76 3 12 22 0.11 34
31 0.11 37
-3 0 179 176 10. 75 3 12 22 0.11 34
31 0.11 37
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 46
No. of states in DFA: 596 (59 KB)
Total size of DFA: 228 KB (256 KB)
Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 202.60u 1.16s 203.76t Elapsed: 00:00:34
Total cpu time: 202.67u 1.19s 203.86t Elapsed: 00:00:34
Start: Mon Oct 1 19:40:13 2001 End: Mon Oct 1 19:40:47 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000