| Kingdom |
Category |
Genus/Species |
Count |
|
|
|
1 |
| Archaea |
|
|
20 |
| |
|
|
1 |
| |
Crenarchaeota |
|
4 |
| |
|
Metallosphaera sedula (mse) |
1 |
| |
|
Nitrosopumilus maritimus (nmr) |
1 |
| |
|
Sulfolobus acidocaldarius (sai) |
1 |
| |
|
Sulfolobus tokodaii (sto) |
1 |
| |
Euryarchaeota |
|
15 |
| |
|
Haloarcula marismortui (hma) |
1 |
| |
|
Methanosarcina acetivorans (mac) |
1 |
| |
|
Methanococcus aeolicus (mae) |
1 |
| |
|
Methanosarcina barkeri (mba) |
3 |
| |
|
Methanoculleus marisnigri (mem) |
2 |
| |
|
Methanococcus jannaschii (mja) |
2 |
| |
|
Methanosarcina mazei (mma) |
2 |
| |
|
Methanococcus maripaludis C6 (mmx) |
1 |
| |
|
Methanobacterium thermoautotrophicum (mth) |
1 |
| |
|
Thermoplasma volcanium (tvo) |
1 |
| |
Korarchaeota |
|
1 |
| |
|
Candidatus Korarchaeum cryptofilum (kcr) |
1 |
| Bacteria |
|
|
4319 |
| |
Acidobacteria |
|
10 |
| |
|
Acidobacteria bacterium (aba) |
4 |
| |
|
Solibacter usitatus (sus) |
6 |
| |
Actinobacteria |
|
12 |
| |
|
Arthrobacter aurescens (aau) |
1 |
| |
|
Corynebacterium glutamicum ATCC 13032 (Bielefeld) (cgb) |
1 |
| |
|
Frankia sp. CcI3 (fra) |
1 |
| |
|
Frankia sp. EAN1pec (fre) |
1 |
| |
|
Mycobacterium avium 104 (mav) |
1 |
| |
|
Nocardioides sp. JS614 (nca) |
2 |
| |
|
Rubrobacter xylanophilus (rxy) |
2 |
| |
|
Saccharopolyspora erythraea (sen) |
2 |
| |
|
Streptomyces griseus (sgr) |
1 |
| |
Bacteroides |
|
9 |
| |
|
Bacteroides thetaiotaomicron (bth) |
1 |
| |
|
Cytophaga hutchinsonii (chu) |
2 |
| |
|
Parabacteroides distasonis (pdi) |
1 |
| |
|
Porphyromonas gingivalis W83 (pgi) |
3 |
| |
|
Salinibacter ruber (sru) |
2 |
| |
Chlamydia |
|
2 |
| |
|
Chlamydophila caviae (cca) |
2 |
| |
Cyanobacteria |
|
4029 |
| |
|
Acaryochloris marina (amr) |
83 |
| |
|
Anabaena sp. PCC7120 (ana) |
121 |
| |
|
Anabaena variabilis (ava) |
135 |
| |
|
Cyanobacteria Yellowstone A-Prime (cya) |
2 |
| |
|
Cyanobacteria Yellowstone B-Prime (cyb) |
10 |
| |
|
Cyanothece sp. ATCC 51142 (cyt) |
2785 |
| |
|
Gloeobacter violaceus (gvi) |
19 |
| |
|
Microcystis aeruginosa (mar) |
407 |
| |
|
Nostoc punctiforme (npu) |
206 |
| |
|
Prochlorococcus marinus SS120 (pma) |
1 |
| |
|
Prochlorococcus marinus MIT9313 (pmt) |
3 |
| |
|
Synechococcus elongatus PCC6301 (syc) |
1 |
| |
|
Synechococcus sp. CC9902 (sye) |
1 |
| |
|
Synechococcus elongatus PCC7942 (syf) |
13 |
| |
|
Synechococcus sp. CC9311 (syg) |
1 |
| |
|
Synechocystis sp. PCC6803 (syn) |
87 |
| |
|
Synechococcus sp. PCC7002 (syp) |
67 |
| |
|
Thermosynechococcus elongatus (tel) |
10 |
| |
|
Trichodesmium erythraeum (ter) |
77 |
| |
Deinococcus-Thermus |
|
1 |
| |
|
Thermus thermophilus HB27 (tth) |
1 |
| |
Firmicutes |
|
28 |
| |
|
Bacillus cereus ATCC 10987 (bca) |
1 |
| |
|
Bacillus clausii (bcl) |
1 |
| |
|
Bacillus cereus ZK (bcz) |
3 |
| |
|
Bacillus halodurans (bha) |
2 |
| |
|
Bacillus pumilus (bpu) |
1 |
| |
|
Bacillus weihenstephanensis (bwe) |
2 |
| |
|
Clostridium botulinum A Hall (cbh) |
1 |
| |
|
Carboxydothermus hydrogenoformans (chy) |
1 |
| |
|
Clostridium kluyveri (ckl) |
1 |
| |
|
Clostridium perfringens ATCC 13124 (cpf) |
1 |
| |
|
Clostridium thermocellum (cth) |
2 |
| |
|
Candidatus Desulforudis audaxviator (dau) |
1 |
| |
|
Desulfotomaculum reducens (drm) |
1 |
| |
|
Finegoldia magna (fma) |
1 |
| |
|
Geobacillus kaustophilus (gka) |
1 |
| |
|
Heliobacterium modesticaldum (hmo) |
3 |
| |
|
Staphylococcus aureus Newman (sae) |
1 |
| |
|
Streptococcus agalactiae A909 (serotype Ia) (sak) |
1 |
| |
|
Streptococcus mutans (smu) |
1 |
| |
|
Symbiobacterium thermophilum (sth) |
1 |
| |
|
Thermoanaerobacter tengcongensis (tte) |
1 |
| |
Green nonsulfur bacteria |
|
25 |
| |
|
Chloroflexus aurantiacus (cau) |
2 |
| |
|
Herpetosiphon aurantiacus (hau) |
6 |
| |
|
Roseiflexus castenholzii DSM13941 (rca) |
4 |
| |
|
Roseiflexus sp. RS-1 (rrs) |
13 |
| |
Green sulfur bacteria |
|
18 |
| |
|
Chlorobium chlorochromatii (cch) |
1 |
| |
|
Chlorobium phaeobacteroides BS1 (cpb) |
2 |
| |
|
Chlorobium phaeobacteroides DSM 266 (cph) |
4 |
| |
|
Chloroherpeton thalassium (cts) |
4 |
| |
|
Prosthecochloris aestuarii (paa) |
2 |
| |
|
Pelodictyon luteolum (plt) |
1 |
| |
|
Pelodictyon phaeoclathratiforme (pph) |
4 |
| |
Hyperthermophilic bacteria |
|
9 |
| |
|
Hydrogenobaculum sp. Y04AAS1 (hya) |
1 |
| |
|
Sulfurihydrogenibium sp. YO3AOP1 (sul) |
1 |
| |
|
Thermotoga maritima (tma) |
3 |
| |
|
Thermotoga petrophila (tpt) |
1 |
| |
|
Thermodesulfovibrio yellowstonii (tye) |
3 |
| |
Planctomyces |
|
3 |
| |
|
Rhodopirellula baltica (rba) |
3 |
| |
Proteobacteria |
|
162 |
| |
|
Acinetobacter baumannii SDF (abm) |
1 |
| |
|
Aeromonas salmonicida (asa) |
1 |
| |
|
Azorhizobium caulinodans (azc) |
1 |
| |
|
Burkholderia ambifaria MC40-6 (bac) |
1 |
| |
|
Bartonella henselae (bhe) |
1 |
| |
|
Bradyrhizobium japonicum (bja) |
2 |
| |
|
Brucella melitensis 16M (bme) |
1 |
| |
|
Brucella ovis (bov) |
1 |
| |
|
Bradyrhizobium sp. ORS278 (bra) |
4 |
| |
|
Burkholderia xenovorans (bxe) |
2 |
| |
|
Caulobacter sp. K31 (cak) |
4 |
| |
|
Cellvibrio japonicus (cja) |
2 |
| |
|
Colwellia psychrerythraea (cps) |
2 |
| |
|
Dechloromonas aromatica (dar) |
2 |
| |
|
Candidatus Desulfococcus oleovorans (dol) |
2 |
| |
|
Desulfovibrio vulgaris DP4 (dvl) |
1 |
| |
|
Desulfovibrio vulgaris Hildenborough (dvu) |
2 |
| |
|
Francisella philomiragia (fph) |
1 |
| |
|
Gluconacetobacter diazotrophicus (gdi) |
1 |
| |
|
Geobacter metallireducens (gme) |
1 |
| |
|
Geobacter uraniumreducens (gur) |
2 |
| |
|
Herminiimonas arsenicoxydans (har) |
1 |
| |
|
Hahella chejuensis (hch) |
2 |
| |
|
Helicobacter pylori G27 (hpg) |
1 |
| |
|
Idiomarina loihiensis (ilo) |
1 |
| |
|
Jannaschia sp. CCS1 (jan) |
1 |
| |
|
Leptothrix cholodnii (lch) |
3 |
| |
|
Magnetospirillum magneticum (mag) |
6 |
| |
|
Marinobacter aquaeolei (maq) |
2 |
| |
|
Methylococcus capsulatus (mca) |
1 |
| |
|
Methylobacterium sp. 4-46 (met) |
2 |
| |
|
Methylobacillus flagellatus (mfa) |
1 |
| |
|
Mesorhizobium loti (mlo) |
2 |
| |
|
Maricaulis maris (mmr) |
1 |
| |
|
Minibacterium massiliensis (mms) |
1 |
| |
|
Marinomonas sp. MWYL1 (mmw) |
3 |
| |
|
Myxococcus xanthus (mxa) |
5 |
| |
|
Novosphingobium aromaticivorans (nar) |
1 |
| |
|
Nitrosomonas eutropha (net) |
1 |
| |
|
Nitrosomonas europaea (neu) |
2 |
| |
|
Nitratiruptor sp. SB155-2 (nis) |
1 |
| |
|
Neisseria meningitidis MC58 (serogroup B) (nme) |
1 |
| |
|
Nitrosospira multiformis (nmu) |
1 |
| |
|
Nitrosococcus oceani (noc) |
5 |
| |
|
Nitrobacter winogradskyi (nwi) |
1 |
| |
|
Ochrobactrum anthropi (oan) |
2 |
| |
|
Pseudomonas aeruginosa PAO1 (pae) |
1 |
| |
|
Pseudomonas aeruginosa PA7 (pap) |
2 |
| |
|
Pseudoalteromonas atlantica (pat) |
1 |
| |
|
Pelobacter carbinolicus (pca) |
1 |
| |
|
Pseudomonas fluorescens Pf0-1 (pfo) |
1 |
| |
|
Pseudoalteromonas haloplanktis (pha) |
2 |
| |
|
Psychromonas ingrahamii (pin) |
2 |
| |
|
Parvibaculum lavamentivorans (pla) |
2 |
| |
|
Pasteurella multocida (pmu) |
1 |
| |
|
Pseudomonas mendocina (pmy) |
1 |
| |
|
Polaromonas naphthalenivorans (pna) |
2 |
| |
|
Polaromonas sp. JS666 (pol) |
2 |
| |
|
Pelobacter propionicus (ppd) |
4 |
| |
|
Pseudomonas putida KT2440 (ppu) |
3 |
| |
|
Pseudomonas stutzeri (psa) |
1 |
| |
|
Roseobacter denitrificans (rde) |
1 |
| |
|
Ralstonia eutropha H16 (reh) |
1 |
| |
|
Rhizobium etli CFN 42 (ret) |
1 |
| |
|
Ralstonia metallidurans (rme) |
1 |
| |
|
Rhodopseudomonas palustris BisB18 (rpc) |
2 |
| |
|
Ralstonia pickettii (rpi) |
1 |
| |
|
Rhodopseudomonas palustris TIE-1 (rpt) |
2 |
| |
|
Rhodospirillum rubrum (rru) |
1 |
| |
|
Ralstonia solanacearum (rso) |
1 |
| |
|
Rhodobacter sphaeroides 2.4.1 (rsp) |
1 |
| |
|
Syntrophus aciditrophicus (sat) |
3 |
| |
|
Shewanella baltica OS155 (sbl) |
2 |
| |
|
Shewanella baltica OS185 (sbm) |
1 |
| |
|
Sorangium cellulosum (scl) |
9 |
| |
|
Saccharophagus degradans (sde) |
3 |
| |
|
Shewanella denitrificans (sdn) |
1 |
| |
|
Shewanella frigidimarina (sfr) |
2 |
| |
|
Syntrophobacter fumaroxidans (sfu) |
1 |
| |
|
Shewanella sp. MR-7 (shm) |
1 |
| |
|
Sinorhizobium medicae (smd) |
2 |
| |
|
Shewanella woodyi ATCC51908 (swd) |
2 |
| |
|
Sphingomonas wittichii (swi) |
1 |
| |
|
Thiobacillus denitrificans (tbd) |
1 |
| |
|
Vibrio cholerae O1 (vch) |
1 |
| |
|
Vibrio fischeri MJ11 (vfm) |
1 |
| |
|
Vibrio harveyi (vha) |
1 |
| |
|
Vibrio parahaemolyticus (vpa) |
1 |
| |
|
Vibrio vulnificus CMCP6 (vvu) |
3 |
| |
|
Vibrio vulnificus YJ016 (vvy) |
1 |
| |
|
Xanthomonas axonopodis (xac) |
1 |
| |
|
Xanthobacter autotrophicus (xau) |
2 |
| |
|
Xylella fastidiosa M12 (xfm) |
1 |
| |
Spirochete |
|
4 |
| |
|
Borrelia garinii (bga) |
2 |
| |
|
Borrelia recurrentis (bre) |
1 |
| |
|
Leptospira borgpetersenii L550 (lbl) |
1 |
| |
Synergistetes |
|
4 |
| |
|
Caldicellulosiruptor saccharolyticus (csc) |
1 |
| |
|
Syntrophomonas wolfei (swo) |
3 |
| |
Verrucomicrobia |
|
3 |
| |
|
Opitutus terrae (ote) |
3 |
| Eukaryotes |
|
|
26 |
| |
Animals |
|
8 |
| |
|
Danio rerio (zebrafish) (dre) |
2 |
| |
|
Drosophila willistoni (dwi) |
1 |
| |
|
Macaca mulatta (rhesus monkey) (mcc) |
1 |
| |
|
Mus musculus (mouse) (mmu) |
2 |
| |
|
Nematostella vectensis (sea anemone) (nve) |
1 |
| |
|
Strongylocentrotus purpuratus (purple sea urchin) (spu) |
1 |
| |
Fungi |
|
1 |
| |
|
Vanderwaltozyma polyspora (vpo) |
1 |
| |
Plants |
|
1 |
| |
|
Physcomitrella patens subsp. patens (ppp) |
1 |
| |
Protists |
|
16 |
| |
|
Cryptosporidium parvum (cpv) |
1 |
| |
|
Dictyostelium discoideum (ddi) |
2 |
| |
|
Monosiga brevicollis (mbr) |
1 |
| |
|
Paramecium tetraurelia (ptm) |
2 |
| |
|
Plasmodium yoelii (pyo) |
2 |
| |
|
Tetrahymena thermophila (tet) |
1 |
| |
|
Trichomonas vaginalis (tva) |
7 |
| NULL |
|
|
241 |
| TOTAL |
|
|
4607 |
![[space]](http://compbio.ornl.gov/public/images/bluespacer.gif){kind=small}
![[space]](http://maple.lsd.ornl.gov/common/images/bluespacer.gif){kind=small}