BLAST Search Results
BLASTP 2.2.4 [Aug-26-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= HCMV041
(608 letters)
Database: nr
1,508,275 sequences; 485,782,529 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9625712|ref|NP_039961.1| UL27 [Human herpesvirus 5] >gnl|BL_O... 1251 0.0
gi|29423458|gb|AAO73456.1| UL27 [Human herpesvirus 5] 1243 0.0
gi|29423468|gb|AAO73461.1| UL27 [Human herpesvirus 5] 1240 0.0
gi|20026630|ref|NP_612671.1| UL27 [Chimpanzee cytomegalovirus] >... 895 0.0
gi|31377923|gb|AAP50573.1| rh46 [Rhesus cytomegalovirus strain 6... 627 e-178
gi|14251008|ref|NP_116370.1| T27 [Tupaia herpesvirus] >gnl|BL_OR... 210 5e-53
gi|9845318|ref|NP_064132.1| pR27 [Rat cytomegalovirus] >gnl|BL_O... 79 2e-13
gi|9628730|ref|NP_043761.1| Hypothetical protein [Human herpesvi... 56 2e-06
gi|2746239|gb|AAC40723.1| U7 [Human herpesvirus 7] 56 2e-06
>gi|9625712|ref|NP_039961.1| UL27 [Human herpesvirus 5]
gi|136869|sp|P16763|UL27_HCMVA HYPOTHETICAL PROTEIN UL27
gi|76550|pir||S09790 hypothetical protein UL27 - human
cytomegalovirus (strain AD169)
gi|59632|emb|CAA35426.1| HCMVUL27 [Human herpesvirus 5]
gi|27808761|tpg|DAA00131.1| TPA: UL27 [Human herpesvirus 5]
Length = 608
Score = 1251 bits (3237), Expect = 0.0
Identities = 608/608 (100%), Positives = 608/608 (100%)
Query: 1 MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL 60
MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL
Sbjct: 1 MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL 60
Query: 61 TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG 120
TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG
Sbjct: 61 TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG 120
Query: 121 KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA 180
KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA
Sbjct: 121 KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA 180
Query: 181 LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL 240
LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL
Sbjct: 181 LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL 240
Query: 241 PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNHDGNHDGN 300
PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNHDGNHDGN
Sbjct: 241 PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNHDGNHDGN 300
Query: 301 DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHLTAGDVARVQDSVSRDLGFA 360
DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHLTAGDVARVQDSVSRDLGFA
Sbjct: 301 DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHLTAGDVARVQDSVSRDLGFA 360
Query: 361 DWSQTLIDDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS 420
DWSQTLIDDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS
Sbjct: 361 DWSQTLIDDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS 420
Query: 421 GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE 480
GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE
Sbjct: 421 GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE 480
Query: 481 LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT 540
LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT
Sbjct: 481 LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT 540
Query: 541 RLPQFSSALSDAELSNHANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP 600
RLPQFSSALSDAELSNHANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP
Sbjct: 541 RLPQFSSALSDAELSNHANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP 600
Query: 601 HEVGGHAT 608
HEVGGHAT
Sbjct: 601 HEVGGHAT 608
>gi|29423458|gb|AAO73456.1| UL27 [Human herpesvirus 5]
Length = 608
Score = 1243 bits (3216), Expect = 0.0
Identities = 604/608 (99%), Positives = 606/608 (99%)
Query: 1 MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL 60
MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL
Sbjct: 1 MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL 60
Query: 61 TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG 120
TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG
Sbjct: 61 TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG 120
Query: 121 KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA 180
KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA
Sbjct: 121 KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA 180
Query: 181 LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL 240
LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL
Sbjct: 181 LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL 240
Query: 241 PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNHDGNHDGN 300
PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNH+GNH GN
Sbjct: 241 PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNHNGNHGGN 300
Query: 301 DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHLTAGDVARVQDSVSRDLGFA 360
DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHLTAGDVARVQDSVSRDLGFA
Sbjct: 301 DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHLTAGDVARVQDSVSRDLGFA 360
Query: 361 DWSQTLIDDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS 420
DWSQTL+DDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS
Sbjct: 361 DWSQTLVDDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS 420
Query: 421 GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE 480
GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE
Sbjct: 421 GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE 480
Query: 481 LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT 540
LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT
Sbjct: 481 LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT 540
Query: 541 RLPQFSSALSDAELSNHANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP 600
RLPQFSSALSDAELSN ANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP
Sbjct: 541 RLPQFSSALSDAELSNQANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP 600
Query: 601 HEVGGHAT 608
HEVGGHAT
Sbjct: 601 HEVGGHAT 608
>gi|29423468|gb|AAO73461.1| UL27 [Human herpesvirus 5]
Length = 608
Score = 1240 bits (3209), Expect = 0.0
Identities = 603/608 (99%), Positives = 605/608 (99%)
Query: 1 MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL 60
MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL
Sbjct: 1 MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL 60
Query: 61 TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG 120
TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG
Sbjct: 61 TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG 120
Query: 121 KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA 180
KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA
Sbjct: 121 KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA 180
Query: 181 LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL 240
LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL
Sbjct: 181 LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL 240
Query: 241 PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNHDGNHDGN 300
PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNH+GNH GN
Sbjct: 241 PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNHNGNHGGN 300
Query: 301 DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHLTAGDVARVQDSVSRDLGFA 360
DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFH PAIRHLTAGDVARVQDSVSRDLGFA
Sbjct: 301 DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHPPAIRHLTAGDVARVQDSVSRDLGFA 360
Query: 361 DWSQTLIDDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS 420
DWSQTL+DDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS
Sbjct: 361 DWSQTLVDDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS 420
Query: 421 GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE 480
GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE
Sbjct: 421 GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE 480
Query: 481 LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT 540
LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT
Sbjct: 481 LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT 540
Query: 541 RLPQFSSALSDAELSNHANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP 600
RLPQFSSALSDAELSN ANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP
Sbjct: 541 RLPQFSSALSDAELSNQANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP 600
Query: 601 HEVGGHAT 608
HEVGGHAT
Sbjct: 601 HEVGGHAT 608
>gi|20026630|ref|NP_612671.1| UL27 [Chimpanzee cytomegalovirus]
gi|19881058|gb|AAM00678.1|AF480884_30 UL27 [chimpanzee
cytomegalovirus]
Length = 640
Score = 895 bits (2312), Expect = 0.0
Identities = 457/648 (70%), Positives = 512/648 (78%), Gaps = 48/648 (7%)
Query: 1 MNPVDQPPPPLPTQQPEEQAKEDHD--DGDERLFRDPLTTYEYLDDCR-DDEEFCHQFLR 57
M + Q P Q +E AK++H D DER++RDPLTTYEYLDDCR DD+EFC F+R
Sbjct: 1 MTELQQSQVQTPEPQ-QEHAKDEHGELDDDERVYRDPLTTYEYLDDCRGDDDEFCRNFIR 59
Query: 58 AYLTPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACAT 117
AYLTPIRNRQEAVR GLLCRTPEDLA + + + K KHAMVY+RRSCL HSA T
Sbjct: 60 AYLTPIRNRQEAVRHGLLCRTPEDLATRHQKPRPAGSGKRSKHAMVYVRRSCLAHSAEVT 119
Query: 118 AHGKYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAK 177
AHGKYDIRGLTLE DLAVWAALR +P PDPQHFRW NAGAFRRLVH A+YLPEISRAAK
Sbjct: 120 AHGKYDIRGLTLEWDLAVWAALRAIPTMPDPQHFRWNNAGAFRRLVHRARYLPEISRAAK 179
Query: 178 RIALAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIG 237
R+ALAVATGQYVVC+LLDYK+FGTRT+YLRQLC++TEELY+RLDGT+CLFL+PEERE+I
Sbjct: 180 RMALAVATGQYVVCSLLDYKSFGTRTNYLRQLCTLTEELYMRLDGTMCLFLDPEEREVIA 239
Query: 238 RCLPAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNHDGNH 297
RCLP LCRGL V+YR+HRAAVFF+ATF ARAE ALK LY+AFCECGD RD +
Sbjct: 240 RCLPQFLCRGLAVRYRSHRAAVFFNATFGARAETALKRLYSAFCECGDWRDPDVPVEAAE 299
Query: 298 D---GNDHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHLTAGDVARVQDSVS 354
+ H+ + P H LE+AELRLE NRHLGAFHLPAIRHLT D++R++ SVS
Sbjct: 300 AVAAASQHAHMLPPP----HFHLENAELRLENNRHLGAFHLPAIRHLTVDDISRIRASVS 355
Query: 355 RDLGFADWSQTLIDDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTA 414
RDLGFA+WSQTL+DDYFLLP GWACANPRRGY MYLASNAVLALRIIRLL ASIRHE TA
Sbjct: 356 RDLGFAEWSQTLVDDYFLLPTGWACANPRRGYVMYLASNAVLALRIIRLLHASIRHEQTA 415
Query: 415 CIRMLSGDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVET 474
C+RMLSGDVQRLIRLFKGEAA+LRKGLAQNPVQRRELSRFRKHVHDLKR+RFT D FVE+
Sbjct: 416 CVRMLSGDVQRLIRLFKGEAAMLRKGLAQNPVQRRELSRFRKHVHDLKRVRFTVDGFVES 475
Query: 475 FCDFLELVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPT----------------PE 518
FCDFL+++ RIPDYR +SLRIKRELLCLH FKLRR R PP+ P
Sbjct: 476 FCDFLDVIHRIPDYRCISLRIKRELLCLHTFKLRRVYRPPPSSLLAGSHHNNSVVLPPPT 535
Query: 519 TA------------------RVQRLLWHSLRHGDAPQDRTRLPQFSSALSDAELSNHANR 560
T R +RL WH LRHGD PQDR+RLPQFSSALSDAELSN+ANR
Sbjct: 536 TTNASSPAPSSPHPDPQLLLRAERLAWHYLRHGDVPQDRSRLPQFSSALSDAELSNNANR 595
Query: 561 CRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRPHEVGGHAT 608
CRRKAP+E A GPSVRYRAHIQ+F+RL+VRRFRPHEVGGHAT
Sbjct: 596 CRRKAPVEFAG---FAGGPSVRYRAHIQRFDRLYVRRFRPHEVGGHAT 640
>gi|31377923|gb|AAP50573.1| rh46 [Rhesus cytomegalovirus strain
68-1]
Length = 579
Score = 627 bits (1617), Expect = e-178
Identities = 326/583 (55%), Positives = 402/583 (68%), Gaps = 20/583 (3%)
Query: 31 LFRDPLTTYEYLDDCRDDEEFCHQFLRAYLTPIRNRQEAVRAGLLCRTPEDLAAAGGQKK 90
++ D +E++ DC DD+ FCH F+R YLTP+R+ +EA AGL P D +++ KK
Sbjct: 10 IYSDQHAAFEFVADCPDDD-FCHNFVRTYLTPVRSLREAALAGLF---PVDSSSSSLTKK 65
Query: 91 KTP------APKHPKHAMVYIRRSCLVHSACATAHGKYDIRGLTLESDLAVWAALRGVPL 144
A K ++YIRRS LV+S ATAHGKY+IRGL+L++DLAVW LRGVPL
Sbjct: 66 PRDTRVVQNAESAKKSPIIYIRRSFLVNSKFATAHGKYNIRGLSLQTDLAVWGLLRGVPL 125
Query: 145 PPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIALAVATGQYVVCTLLDYKTFGTRTH 204
PDP HF W+N FRRLV +LPEIS++ KRIALAVATGQY V TLL+YK FG +TH
Sbjct: 126 RPDPGHFHWMNLMQFRRLVAAGPFLPEISKSGKRIALAVATGQYAVSTLLNYKVFGNKTH 185
Query: 205 YLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCLPAALCRGLPVKYRTHRAAVFFHAT 264
YLRQLC +TEEL+ RL GT+CLFL+ +R+LI +CLP LC+ LPV YR + AVFF+
Sbjct: 186 YLRQLCVITEELFRRLAGTVCLFLDAGDRDLIQKCLPPHLCKKLPVNYRVQKNAVFFNPR 245
Query: 265 FMARAEAALKDLYAAFCECGDGRDNGGNHDGNHDGNDHSSLSPSAVASHHSRLEHAELRL 324
F RAEAAL LYA FC CGD D SP RLE AEL L
Sbjct: 246 FALRAEAALHTLYARFCTCGDCHDLFVASSDTQATPSEEEPSPP-----QPRLEDAELTL 300
Query: 325 ERNRHLGAFHLPAIRHLTAGDVARVQDSVSRDLGFADWSQTLIDDYFLLPAGWACANPRR 384
N HLG FHLPAIRHLTA + RVQ SV+RDLGF DWS TL+DDYFLLP G +C P
Sbjct: 301 LHNAHLGKFHLPAIRHLTAAEQLRVQQSVARDLGFTDWSHTLVDDYFLLPVGLSCGTPCE 360
Query: 385 GYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLSGDVQRLIRLFKGEAALLRKGLAQN 444
GYAMYL SNAVLAL++IRLL +IRHE++AC+R L DV LIR+F+ EA+++RKGLAQN
Sbjct: 361 GYAMYLMSNAVLALKVIRLLYITIRHEHSACVRALCKDVAFLIRMFRYEASIIRKGLAQN 420
Query: 445 PVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLELVQRIPDYRSVSLRIKRELLCLHV 504
QR ELSRFR+H+HDLK I FT F+ETFCDF+++V +IPDY+ +SL IKREL+ LH+
Sbjct: 421 ATQRMELSRFRRHIHDLKHIHFTVSNFLETFCDFIKIVNKIPDYQCISLTIKRELVLLHL 480
Query: 505 FKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRTRLPQFSSALSDAELSNHANRCRRK 564
+LRR P+ ET + ++L W+ RHGD D L F S L+D ELSN+ANRCRRK
Sbjct: 481 LRLRRVYEC-PSAETRKGEKLAWYYFRHGDVTLDPGLLMTFDSLLADCELSNNANRCRRK 539
Query: 565 APLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRPHEVGGHA 607
AP E+ + +VRY+ HI+K RL+VRRFRPHEVGG A
Sbjct: 540 APFEIPTSATV----TVRYQGHIEKLHRLYVRRFRPHEVGGCA 578
>gi|14251008|ref|NP_116370.1| T27 [Tupaia herpesvirus]
gi|14210702|gb|AAK57065.1| T27 [Tupaia herpesvirus]
Length = 636
Score = 210 bits (535), Expect = 5e-53
Identities = 173/524 (33%), Positives = 242/524 (46%), Gaps = 31/524 (5%)
Query: 102 MVYIRRSCLVHSACATAHGKYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRR 161
++ R S L ++ ATA GKY IRGL L D AVW LR LP + L A
Sbjct: 80 VIQFRSSYLQNAEFATAAGKYRIRGLLLPWDTAVWGLLRRSALPSRFNPLQRLRAADLCS 139
Query: 162 LVHEAQYLPEISRAAKRIALAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLD 221
++ + PE S A+ +A VA GQY V T+ DY+ G +HYLR LC LY RL+
Sbjct: 140 YLNTVAFRPEASDVARHVARTVAVGQYAVQTVFDYRNPGGLSHYLRFLCESVHALYGRLE 199
Query: 222 GTLCLFLEPEERELIGRCLPAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFC 281
+ L+ R LI LP A+CR L Y F ++ +E L+ LY C
Sbjct: 200 -RIGDTLDDRARLLIADLLPRAVCRQLGYAYDPDDQTFIFDPQYLHASEQVLQILYDRLC 258
Query: 282 ECGDGRDNGGNHDGNHDGNDHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHL 341
+C + ++ S + E ++ LE+ R LG LP +RHL
Sbjct: 259 DCEECQER--RFTAAAAATSLRRGPKRRKRSSWAAFERRDVVLEQYRELGVLRLPCLRHL 316
Query: 342 TAGDVARVQDSVSRDLGFADWSQTLIDDYFLLPAGWACAN-PRRGYAMYLASNAVLALRI 400
+ + DL F QTL LLP G C + YA+YLASN V L +
Sbjct: 317 KRDQQLELCQQLRHDLCFRR-RQTLTARELLLPIGVPCGHGVSDAYALYLASNLVFTLFL 375
Query: 401 IRLLRASIRHEYTACIRMLSGDVQRLIRLFKGEAALLRKG-------------LAQNPVQ 447
+ L A +R E A I +LSG L+ + +A+ L+ G ++P
Sbjct: 376 AQTLHAIVRIEARAYIDLLSGHADALVGALRRQASYLQHGGLGDGDGNDAGPSGGRSPSD 435
Query: 448 RRELSRFRKHVHDLKRIRF-----TEDTFVETFCDFLELVQRIPDYRSVSLRIKRELLCL 502
R+L+R + + L F + F FCDFLE+V+++PDY +S RE L +
Sbjct: 436 GRKLARLTRRLRGLD-FGFGGGSGSGTAFFTAFCDFLEIVEKLPDYARLSEFQVREELLV 494
Query: 503 HVFKLRRGCRAPPTPETARVQRLLWHSLRHGDA-PQDRTRLPQFSSALSDAELSNHANRC 561
H F L + A P+PET +RL+ + +++GDA QD RL LSD ELS A R
Sbjct: 495 HHFYLAQ-VYADPSPETQAGERLVSYYVQNGDACCQDAARLRALVVDLSDRELS-RAPRA 552
Query: 562 RRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRPHEVGG 605
+ P + P P +R H FE L+VRR+ EVGG
Sbjct: 553 EPSWAWTIEPTEIVFP-PRIREVTH---FEDLYVRRYWSGEVGG 592
>gi|9845318|ref|NP_064132.1| pR27 [Rat cytomegalovirus]
gi|9800253|gb|AAF99127.1|AF232689_18 pR27 [rat cytomegalovirus
Maastricht]
Length = 671
Score = 79.0 bits (193), Expect = 2e-13
Identities = 94/354 (26%), Positives = 135/354 (37%), Gaps = 41/354 (11%)
Query: 103 VYIRRSCLVHSACATAHGKYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRL 162
V ++ S L ++ ATA+G Y I GL L D AVW LR + P F + N +
Sbjct: 28 VELKISYLKNARFATANGHYGIIGLALRWDTAVWGLLREIECVPYSNPFVFPNCARLSGI 87
Query: 163 VHEAQYLPEISRAAKRIALAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLR--- 219
+ Q+ PE + + + A QY V L Y YLR L EL R
Sbjct: 88 IAAMQFRPEANEVVRALCRACVAAQYGVSILFSYDHCAAVPRYLRSLVQELVELNDRIRH 147
Query: 220 LDGTLCLFLEPEERELIGRCLP--AALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLY 277
L L +E E+ +I LP A G+P + +F + EAA+ ++
Sbjct: 148 LSIVSNLRVEAEDLGVIQGVLPERVAALLGVPAAHE-----LFLSDEYYDCVEAAVDAMF 202
Query: 278 AAFCECGD------GRDNGGNHDGNHDGNDHSSLSPSAVASHHSRL-EHAELRLERNRHL 330
FCEC + R D ++ +R E ++ L L
Sbjct: 203 DRFCECAECGMRRSERIVAVRARALGDARGLTARRGMLRKKRRNRFFEENDVALPFCPEL 262
Query: 331 GAFHLPAIRHLTAGDVARVQDSVSRDLGFADWSQTLIDDYFLLPAGWA---------CA- 380
G LP IRHL + + RDL F D F + G + C+
Sbjct: 263 GRLRLPRIRHLDLVQQELLCRHIGRDLMF--------DSMFGVCRGMSRMRGVPIPFCSA 314
Query: 381 ---NPRRGYAMYLASNAVLALRIIRLLRASIRHE---YTACIRMLSGDVQRLIR 428
N Y +YLASN+ +IR +R +RHE Y L+ D R +R
Sbjct: 315 EKLNLDLAYVLYLASNSYFLCFLIRTVRDVMRHEERAYGELCLGLARDAARALR 368
>gi|9628730|ref|NP_043761.1| Hypothetical protein [Human herpesvirus
7]
gi|1722827|sp|P52522|VU5_HSV7J U5 protein
gi|7519669|pir||T41909 hypothetical protein U5/7 - human
herpesvirus 7 (strain JI)
gi|1139609|gb|AAC54669.1| HHV-6 U5/U7; U7 similar to HCMV US22 gene
family
Length = 865
Score = 55.8 bits (133), Expect = 2e-06
Identities = 88/410 (21%), Positives = 153/410 (36%), Gaps = 28/410 (6%)
Query: 102 MVYIRRSCLVHSACATAHGKYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRR 161
+V + S L++ A+A G++ I+GL L SD +W L + A F
Sbjct: 364 IVPVTESRLINGLQASAAGRFGIKGLRLCSDGVIWNRLIDYEYEMFKYPSTFTRADKFLL 423
Query: 162 LVHEAQYLPEISRAAKRIALAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLD 221
+ + +++ + + I A G Y +L + ++ R LC L+ +LD
Sbjct: 424 QLRDLKFMEDFDPKWQCITKLAAVGFYSGASLFNLGAKPGIGYWCRYLCEYLSMLFFKLD 483
Query: 222 GTLCLFLEPEERELIGRCLPAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFC 281
G L L E ++ +G A + + ++ FF F R + L + + FC
Sbjct: 484 GKL-KELSKESKQKLGGFSCAFWSESFKTEMQ-NKTESFFRRDFFDRFQLYLLEHFLLFC 541
Query: 282 ECGDGRDN--GGNHDGNHDGNDHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIR 339
C + R N + G N P +V H LG LP
Sbjct: 542 GCEECRYNFFRFKNVGTMKKN------PGSVKLHFFPA------------LGKIDLPIFP 583
Query: 340 HLTAGDVARVQDSVSRDLGFADWSQTLIDDYFLLPAGWACANPRRGYAMYLASNAVLALR 399
HL+ + + V++DL + + F + +R + + SN V L
Sbjct: 584 HLSE-KYSNLSMFVAKDLCLSFIEGQIEHSRFPISVTVDMGQDKRN-LLNILSNIVFLLF 641
Query: 400 IIRLLRASIRHEYTACIRMLSGDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVH 459
II+ L + + E + +++ L + E L KG N V L K V
Sbjct: 642 IIQTLNSVLFTELKMYYDVYLDELKNLESSMECEMKLGSKGCMNNIVYFNML----KQVK 697
Query: 460 DLKRIRFTEDTFVETFCDFLELVQRIPDYRSVSLRIKRELLCLHVFKLRR 509
D+ R T F+ + +++ IP Y++ E LH ++R
Sbjct: 698 DIVRNPGTSSNFIFNCLEVIKMSFEIPYYKNYDETNFMESFYLHHLYIQR 747
>gi|2746239|gb|AAC40723.1| U7 [Human herpesvirus 7]
Length = 871
Score = 55.8 bits (133), Expect = 2e-06
Identities = 88/410 (21%), Positives = 153/410 (36%), Gaps = 28/410 (6%)
Query: 102 MVYIRRSCLVHSACATAHGKYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRR 161
+V + S L++ A+A G++ I+GL L SD +W L + A F
Sbjct: 370 IVPVTESRLINGLQASAAGRFGIKGLRLCSDGVIWNRLIDYEYEMFKYPSTFTRADKFLL 429
Query: 162 LVHEAQYLPEISRAAKRIALAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLD 221
+ + +++ + + I A G Y +L + ++ R LC L+ +LD
Sbjct: 430 QLRDLKFMEDFDPKWQCITKLAAVGFYSGASLFNLGAKPGIGYWCRYLCEYLSMLFFKLD 489
Query: 222 GTLCLFLEPEERELIGRCLPAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFC 281
G L L E ++ +G A + + ++ FF F R + L + + FC
Sbjct: 490 GKL-KELSKESKQKLGGFSCAFWSESFKTEMQ-NKTESFFRRDFFDRFQLYLLEHFLLFC 547
Query: 282 ECGDGRDN--GGNHDGNHDGNDHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIR 339
C + R N + G N P +V H LG LP
Sbjct: 548 GCEECRYNFFRFKNVGTMKKN------PGSVKLHFFPA------------LGKIDLPIFP 589
Query: 340 HLTAGDVARVQDSVSRDLGFADWSQTLIDDYFLLPAGWACANPRRGYAMYLASNAVLALR 399
HL+ + + V++DL + + F + +R + + SN V L
Sbjct: 590 HLSE-KYSNLSMFVAKDLCLSFIEGQIEHSRFPISVTVDMGQDKRN-LLNILSNIVFLLF 647
Query: 400 IIRLLRASIRHEYTACIRMLSGDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVH 459
II+ L + + E + +++ L + E L KG N V L K V
Sbjct: 648 IIQTLNSVLFTELKMYYDVYLDELKNLESSMECEMKLGSKGCMNNIVYFNML----KQVK 703
Query: 460 DLKRIRFTEDTFVETFCDFLELVQRIPDYRSVSLRIKRELLCLHVFKLRR 509
D+ R T F+ + +++ IP Y++ E LH ++R
Sbjct: 704 DIVRNPGTSSNFIFNCLEVIKMSFEIPYYKNYDETNFMESFYLHHLYIQR 753
Database: nr
Posted date: Aug 27, 2003 10:37 AM
Number of letters in database: 485,782,529
Number of sequences in database: 1,508,275
Lambda K H
0.325 0.139 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 625,924,402
Number of Sequences: 1508275
Number of extensions: 27122710
Number of successful extensions: 103763
Number of sequences better than 1.0e-03: 9
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 103726
Number of HSP's gapped (non-prelim): 17
length of query: 608
length of database: 485,782,529
effective HSP length: 130
effective length of query: 478
effective length of database: 289,706,779
effective search space: 138479840362
effective search space used: 138479840362
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 110 (47.0 bits)