BLASTP 2.2.4 [Aug-26-2002]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= HCMV041
         (608 letters)

Database: nr 
           1,508,275 sequences; 485,782,529 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|9625712|ref|NP_039961.1| UL27 [Human herpesvirus 5] >gnl|BL_O...  1251   0.0  
gi|29423458|gb|AAO73456.1| UL27 [Human herpesvirus 5]                1243   0.0  
gi|29423468|gb|AAO73461.1| UL27 [Human herpesvirus 5]                1240   0.0  
gi|20026630|ref|NP_612671.1| UL27 [Chimpanzee cytomegalovirus] >...   895   0.0  
gi|31377923|gb|AAP50573.1| rh46 [Rhesus cytomegalovirus strain 6...   627   e-178
gi|14251008|ref|NP_116370.1| T27 [Tupaia herpesvirus] >gnl|BL_OR...   210   5e-53
gi|9845318|ref|NP_064132.1| pR27 [Rat cytomegalovirus] >gnl|BL_O...    79   2e-13
gi|9628730|ref|NP_043761.1| Hypothetical protein [Human herpesvi...    56   2e-06
gi|2746239|gb|AAC40723.1| U7 [Human herpesvirus 7]                     56   2e-06

>gi|9625712|ref|NP_039961.1| UL27 [Human herpesvirus 5]
 gi|136869|sp|P16763|UL27_HCMVA HYPOTHETICAL PROTEIN UL27
 gi|76550|pir||S09790 hypothetical protein UL27 - human
           cytomegalovirus (strain AD169)
 gi|59632|emb|CAA35426.1| HCMVUL27 [Human herpesvirus 5]
 gi|27808761|tpg|DAA00131.1| TPA: UL27 [Human herpesvirus 5]
          Length = 608

 Score = 1251 bits (3237), Expect = 0.0
 Identities = 608/608 (100%), Positives = 608/608 (100%)

Query: 1   MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL 60
           MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL
Sbjct: 1   MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL 60

Query: 61  TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG 120
           TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG
Sbjct: 61  TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG 120

Query: 121 KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA 180
           KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA
Sbjct: 121 KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA 180

Query: 181 LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL 240
           LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL
Sbjct: 181 LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL 240

Query: 241 PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNHDGNHDGN 300
           PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNHDGNHDGN
Sbjct: 241 PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNHDGNHDGN 300

Query: 301 DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHLTAGDVARVQDSVSRDLGFA 360
           DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHLTAGDVARVQDSVSRDLGFA
Sbjct: 301 DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHLTAGDVARVQDSVSRDLGFA 360

Query: 361 DWSQTLIDDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS 420
           DWSQTLIDDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS
Sbjct: 361 DWSQTLIDDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS 420

Query: 421 GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE 480
           GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE
Sbjct: 421 GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE 480

Query: 481 LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT 540
           LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT
Sbjct: 481 LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT 540

Query: 541 RLPQFSSALSDAELSNHANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP 600
           RLPQFSSALSDAELSNHANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP
Sbjct: 541 RLPQFSSALSDAELSNHANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP 600

Query: 601 HEVGGHAT 608
           HEVGGHAT
Sbjct: 601 HEVGGHAT 608



>gi|29423458|gb|AAO73456.1| UL27 [Human herpesvirus 5]
          Length = 608

 Score = 1243 bits (3216), Expect = 0.0
 Identities = 604/608 (99%), Positives = 606/608 (99%)

Query: 1   MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL 60
           MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL
Sbjct: 1   MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL 60

Query: 61  TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG 120
           TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG
Sbjct: 61  TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG 120

Query: 121 KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA 180
           KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA
Sbjct: 121 KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA 180

Query: 181 LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL 240
           LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL
Sbjct: 181 LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL 240

Query: 241 PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNHDGNHDGN 300
           PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNH+GNH GN
Sbjct: 241 PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNHNGNHGGN 300

Query: 301 DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHLTAGDVARVQDSVSRDLGFA 360
           DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHLTAGDVARVQDSVSRDLGFA
Sbjct: 301 DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHLTAGDVARVQDSVSRDLGFA 360

Query: 361 DWSQTLIDDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS 420
           DWSQTL+DDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS
Sbjct: 361 DWSQTLVDDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS 420

Query: 421 GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE 480
           GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE
Sbjct: 421 GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE 480

Query: 481 LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT 540
           LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT
Sbjct: 481 LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT 540

Query: 541 RLPQFSSALSDAELSNHANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP 600
           RLPQFSSALSDAELSN ANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP
Sbjct: 541 RLPQFSSALSDAELSNQANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP 600

Query: 601 HEVGGHAT 608
           HEVGGHAT
Sbjct: 601 HEVGGHAT 608



>gi|29423468|gb|AAO73461.1| UL27 [Human herpesvirus 5]
          Length = 608

 Score = 1240 bits (3209), Expect = 0.0
 Identities = 603/608 (99%), Positives = 605/608 (99%)

Query: 1   MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL 60
           MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL
Sbjct: 1   MNPVDQPPPPLPTQQPEEQAKEDHDDGDERLFRDPLTTYEYLDDCRDDEEFCHQFLRAYL 60

Query: 61  TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG 120
           TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG
Sbjct: 61  TPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACATAHG 120

Query: 121 KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA 180
           KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA
Sbjct: 121 KYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIA 180

Query: 181 LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL 240
           LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL
Sbjct: 181 LAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCL 240

Query: 241 PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNHDGNHDGN 300
           PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNH+GNH GN
Sbjct: 241 PAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNHNGNHGGN 300

Query: 301 DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHLTAGDVARVQDSVSRDLGFA 360
           DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFH PAIRHLTAGDVARVQDSVSRDLGFA
Sbjct: 301 DHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHPPAIRHLTAGDVARVQDSVSRDLGFA 360

Query: 361 DWSQTLIDDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS 420
           DWSQTL+DDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS
Sbjct: 361 DWSQTLVDDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLS 420

Query: 421 GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE 480
           GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE
Sbjct: 421 GDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLE 480

Query: 481 LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT 540
           LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT
Sbjct: 481 LVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRT 540

Query: 541 RLPQFSSALSDAELSNHANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP 600
           RLPQFSSALSDAELSN ANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP
Sbjct: 541 RLPQFSSALSDAELSNQANRCRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRP 600

Query: 601 HEVGGHAT 608
           HEVGGHAT
Sbjct: 601 HEVGGHAT 608



>gi|20026630|ref|NP_612671.1| UL27 [Chimpanzee cytomegalovirus]
 gi|19881058|gb|AAM00678.1|AF480884_30 UL27 [chimpanzee
           cytomegalovirus]
          Length = 640

 Score =  895 bits (2312), Expect = 0.0
 Identities = 457/648 (70%), Positives = 512/648 (78%), Gaps = 48/648 (7%)

Query: 1   MNPVDQPPPPLPTQQPEEQAKEDHD--DGDERLFRDPLTTYEYLDDCR-DDEEFCHQFLR 57
           M  + Q     P  Q +E AK++H   D DER++RDPLTTYEYLDDCR DD+EFC  F+R
Sbjct: 1   MTELQQSQVQTPEPQ-QEHAKDEHGELDDDERVYRDPLTTYEYLDDCRGDDDEFCRNFIR 59

Query: 58  AYLTPIRNRQEAVRAGLLCRTPEDLAAAGGQKKKTPAPKHPKHAMVYIRRSCLVHSACAT 117
           AYLTPIRNRQEAVR GLLCRTPEDLA    + +   + K  KHAMVY+RRSCL HSA  T
Sbjct: 60  AYLTPIRNRQEAVRHGLLCRTPEDLATRHQKPRPAGSGKRSKHAMVYVRRSCLAHSAEVT 119

Query: 118 AHGKYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAK 177
           AHGKYDIRGLTLE DLAVWAALR +P  PDPQHFRW NAGAFRRLVH A+YLPEISRAAK
Sbjct: 120 AHGKYDIRGLTLEWDLAVWAALRAIPTMPDPQHFRWNNAGAFRRLVHRARYLPEISRAAK 179

Query: 178 RIALAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLDGTLCLFLEPEERELIG 237
           R+ALAVATGQYVVC+LLDYK+FGTRT+YLRQLC++TEELY+RLDGT+CLFL+PEERE+I 
Sbjct: 180 RMALAVATGQYVVCSLLDYKSFGTRTNYLRQLCTLTEELYMRLDGTMCLFLDPEEREVIA 239

Query: 238 RCLPAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFCECGDGRDNGGNHDGNH 297
           RCLP  LCRGL V+YR+HRAAVFF+ATF ARAE ALK LY+AFCECGD RD     +   
Sbjct: 240 RCLPQFLCRGLAVRYRSHRAAVFFNATFGARAETALKRLYSAFCECGDWRDPDVPVEAAE 299

Query: 298 D---GNDHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHLTAGDVARVQDSVS 354
                + H+ + P      H  LE+AELRLE NRHLGAFHLPAIRHLT  D++R++ SVS
Sbjct: 300 AVAAASQHAHMLPPP----HFHLENAELRLENNRHLGAFHLPAIRHLTVDDISRIRASVS 355

Query: 355 RDLGFADWSQTLIDDYFLLPAGWACANPRRGYAMYLASNAVLALRIIRLLRASIRHEYTA 414
           RDLGFA+WSQTL+DDYFLLP GWACANPRRGY MYLASNAVLALRIIRLL ASIRHE TA
Sbjct: 356 RDLGFAEWSQTLVDDYFLLPTGWACANPRRGYVMYLASNAVLALRIIRLLHASIRHEQTA 415

Query: 415 CIRMLSGDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVHDLKRIRFTEDTFVET 474
           C+RMLSGDVQRLIRLFKGEAA+LRKGLAQNPVQRRELSRFRKHVHDLKR+RFT D FVE+
Sbjct: 416 CVRMLSGDVQRLIRLFKGEAAMLRKGLAQNPVQRRELSRFRKHVHDLKRVRFTVDGFVES 475

Query: 475 FCDFLELVQRIPDYRSVSLRIKRELLCLHVFKLRRGCRAPPT----------------PE 518
           FCDFL+++ RIPDYR +SLRIKRELLCLH FKLRR  R PP+                P 
Sbjct: 476 FCDFLDVIHRIPDYRCISLRIKRELLCLHTFKLRRVYRPPPSSLLAGSHHNNSVVLPPPT 535

Query: 519 TA------------------RVQRLLWHSLRHGDAPQDRTRLPQFSSALSDAELSNHANR 560
           T                   R +RL WH LRHGD PQDR+RLPQFSSALSDAELSN+ANR
Sbjct: 536 TTNASSPAPSSPHPDPQLLLRAERLAWHYLRHGDVPQDRSRLPQFSSALSDAELSNNANR 595

Query: 561 CRRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRPHEVGGHAT 608
           CRRKAP+E       A GPSVRYRAHIQ+F+RL+VRRFRPHEVGGHAT
Sbjct: 596 CRRKAPVEFAG---FAGGPSVRYRAHIQRFDRLYVRRFRPHEVGGHAT 640



>gi|31377923|gb|AAP50573.1| rh46 [Rhesus cytomegalovirus strain
           68-1]
          Length = 579

 Score =  627 bits (1617), Expect = e-178
 Identities = 326/583 (55%), Positives = 402/583 (68%), Gaps = 20/583 (3%)

Query: 31  LFRDPLTTYEYLDDCRDDEEFCHQFLRAYLTPIRNRQEAVRAGLLCRTPEDLAAAGGQKK 90
           ++ D    +E++ DC DD+ FCH F+R YLTP+R+ +EA  AGL    P D +++   KK
Sbjct: 10  IYSDQHAAFEFVADCPDDD-FCHNFVRTYLTPVRSLREAALAGLF---PVDSSSSSLTKK 65

Query: 91  KTP------APKHPKHAMVYIRRSCLVHSACATAHGKYDIRGLTLESDLAVWAALRGVPL 144
                    A    K  ++YIRRS LV+S  ATAHGKY+IRGL+L++DLAVW  LRGVPL
Sbjct: 66  PRDTRVVQNAESAKKSPIIYIRRSFLVNSKFATAHGKYNIRGLSLQTDLAVWGLLRGVPL 125

Query: 145 PPDPQHFRWLNAGAFRRLVHEAQYLPEISRAAKRIALAVATGQYVVCTLLDYKTFGTRTH 204
            PDP HF W+N   FRRLV    +LPEIS++ KRIALAVATGQY V TLL+YK FG +TH
Sbjct: 126 RPDPGHFHWMNLMQFRRLVAAGPFLPEISKSGKRIALAVATGQYAVSTLLNYKVFGNKTH 185

Query: 205 YLRQLCSMTEELYLRLDGTLCLFLEPEERELIGRCLPAALCRGLPVKYRTHRAAVFFHAT 264
           YLRQLC +TEEL+ RL GT+CLFL+  +R+LI +CLP  LC+ LPV YR  + AVFF+  
Sbjct: 186 YLRQLCVITEELFRRLAGTVCLFLDAGDRDLIQKCLPPHLCKKLPVNYRVQKNAVFFNPR 245

Query: 265 FMARAEAALKDLYAAFCECGDGRDNGGNHDGNHDGNDHSSLSPSAVASHHSRLEHAELRL 324
           F  RAEAAL  LYA FC CGD  D                 SP        RLE AEL L
Sbjct: 246 FALRAEAALHTLYARFCTCGDCHDLFVASSDTQATPSEEEPSPP-----QPRLEDAELTL 300

Query: 325 ERNRHLGAFHLPAIRHLTAGDVARVQDSVSRDLGFADWSQTLIDDYFLLPAGWACANPRR 384
             N HLG FHLPAIRHLTA +  RVQ SV+RDLGF DWS TL+DDYFLLP G +C  P  
Sbjct: 301 LHNAHLGKFHLPAIRHLTAAEQLRVQQSVARDLGFTDWSHTLVDDYFLLPVGLSCGTPCE 360

Query: 385 GYAMYLASNAVLALRIIRLLRASIRHEYTACIRMLSGDVQRLIRLFKGEAALLRKGLAQN 444
           GYAMYL SNAVLAL++IRLL  +IRHE++AC+R L  DV  LIR+F+ EA+++RKGLAQN
Sbjct: 361 GYAMYLMSNAVLALKVIRLLYITIRHEHSACVRALCKDVAFLIRMFRYEASIIRKGLAQN 420

Query: 445 PVQRRELSRFRKHVHDLKRIRFTEDTFVETFCDFLELVQRIPDYRSVSLRIKRELLCLHV 504
             QR ELSRFR+H+HDLK I FT   F+ETFCDF+++V +IPDY+ +SL IKREL+ LH+
Sbjct: 421 ATQRMELSRFRRHIHDLKHIHFTVSNFLETFCDFIKIVNKIPDYQCISLTIKRELVLLHL 480

Query: 505 FKLRRGCRAPPTPETARVQRLLWHSLRHGDAPQDRTRLPQFSSALSDAELSNHANRCRRK 564
            +LRR     P+ ET + ++L W+  RHGD   D   L  F S L+D ELSN+ANRCRRK
Sbjct: 481 LRLRRVYEC-PSAETRKGEKLAWYYFRHGDVTLDPGLLMTFDSLLADCELSNNANRCRRK 539

Query: 565 APLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRPHEVGGHA 607
           AP E+  +       +VRY+ HI+K  RL+VRRFRPHEVGG A
Sbjct: 540 APFEIPTSATV----TVRYQGHIEKLHRLYVRRFRPHEVGGCA 578



>gi|14251008|ref|NP_116370.1| T27 [Tupaia herpesvirus]
 gi|14210702|gb|AAK57065.1| T27 [Tupaia herpesvirus]
          Length = 636

 Score =  210 bits (535), Expect = 5e-53
 Identities = 173/524 (33%), Positives = 242/524 (46%), Gaps = 31/524 (5%)

Query: 102 MVYIRRSCLVHSACATAHGKYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRR 161
           ++  R S L ++  ATA GKY IRGL L  D AVW  LR   LP      + L A     
Sbjct: 80  VIQFRSSYLQNAEFATAAGKYRIRGLLLPWDTAVWGLLRRSALPSRFNPLQRLRAADLCS 139

Query: 162 LVHEAQYLPEISRAAKRIALAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLD 221
            ++   + PE S  A+ +A  VA GQY V T+ DY+  G  +HYLR LC     LY RL+
Sbjct: 140 YLNTVAFRPEASDVARHVARTVAVGQYAVQTVFDYRNPGGLSHYLRFLCESVHALYGRLE 199

Query: 222 GTLCLFLEPEERELIGRCLPAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFC 281
             +   L+   R LI   LP A+CR L   Y        F   ++  +E  L+ LY   C
Sbjct: 200 -RIGDTLDDRARLLIADLLPRAVCRQLGYAYDPDDQTFIFDPQYLHASEQVLQILYDRLC 258

Query: 282 ECGDGRDNGGNHDGNHDGNDHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIRHL 341
           +C + ++                       S  +  E  ++ LE+ R LG   LP +RHL
Sbjct: 259 DCEECQER--RFTAAAAATSLRRGPKRRKRSSWAAFERRDVVLEQYRELGVLRLPCLRHL 316

Query: 342 TAGDVARVQDSVSRDLGFADWSQTLIDDYFLLPAGWACAN-PRRGYAMYLASNAVLALRI 400
                  +   +  DL F    QTL     LLP G  C +     YA+YLASN V  L +
Sbjct: 317 KRDQQLELCQQLRHDLCFRR-RQTLTARELLLPIGVPCGHGVSDAYALYLASNLVFTLFL 375

Query: 401 IRLLRASIRHEYTACIRMLSGDVQRLIRLFKGEAALLRKG-------------LAQNPVQ 447
            + L A +R E  A I +LSG    L+   + +A+ L+ G               ++P  
Sbjct: 376 AQTLHAIVRIEARAYIDLLSGHADALVGALRRQASYLQHGGLGDGDGNDAGPSGGRSPSD 435

Query: 448 RRELSRFRKHVHDLKRIRF-----TEDTFVETFCDFLELVQRIPDYRSVSLRIKRELLCL 502
            R+L+R  + +  L    F     +   F   FCDFLE+V+++PDY  +S    RE L +
Sbjct: 436 GRKLARLTRRLRGLD-FGFGGGSGSGTAFFTAFCDFLEIVEKLPDYARLSEFQVREELLV 494

Query: 503 HVFKLRRGCRAPPTPETARVQRLLWHSLRHGDA-PQDRTRLPQFSSALSDAELSNHANRC 561
           H F L +   A P+PET   +RL+ + +++GDA  QD  RL      LSD ELS  A R 
Sbjct: 495 HHFYLAQ-VYADPSPETQAGERLVSYYVQNGDACCQDAARLRALVVDLSDRELS-RAPRA 552

Query: 562 RRKAPLELGPAVVAAPGPSVRYRAHIQKFERLHVRRFRPHEVGG 605
                  + P  +  P P +R   H   FE L+VRR+   EVGG
Sbjct: 553 EPSWAWTIEPTEIVFP-PRIREVTH---FEDLYVRRYWSGEVGG 592



>gi|9845318|ref|NP_064132.1| pR27 [Rat cytomegalovirus]
 gi|9800253|gb|AAF99127.1|AF232689_18 pR27 [rat cytomegalovirus
           Maastricht]
          Length = 671

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 94/354 (26%), Positives = 135/354 (37%), Gaps = 41/354 (11%)

Query: 103 VYIRRSCLVHSACATAHGKYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRRL 162
           V ++ S L ++  ATA+G Y I GL L  D AVW  LR +   P    F + N      +
Sbjct: 28  VELKISYLKNARFATANGHYGIIGLALRWDTAVWGLLREIECVPYSNPFVFPNCARLSGI 87

Query: 163 VHEAQYLPEISRAAKRIALAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLR--- 219
           +   Q+ PE +   + +  A    QY V  L  Y        YLR L     EL  R   
Sbjct: 88  IAAMQFRPEANEVVRALCRACVAAQYGVSILFSYDHCAAVPRYLRSLVQELVELNDRIRH 147

Query: 220 LDGTLCLFLEPEERELIGRCLP--AALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLY 277
           L     L +E E+  +I   LP   A   G+P  +      +F    +    EAA+  ++
Sbjct: 148 LSIVSNLRVEAEDLGVIQGVLPERVAALLGVPAAHE-----LFLSDEYYDCVEAAVDAMF 202

Query: 278 AAFCECGD------GRDNGGNHDGNHDGNDHSSLSPSAVASHHSRL-EHAELRLERNRHL 330
             FCEC +       R          D    ++          +R  E  ++ L     L
Sbjct: 203 DRFCECAECGMRRSERIVAVRARALGDARGLTARRGMLRKKRRNRFFEENDVALPFCPEL 262

Query: 331 GAFHLPAIRHLTAGDVARVQDSVSRDLGFADWSQTLIDDYFLLPAGWA---------CA- 380
           G   LP IRHL       +   + RDL F        D  F +  G +         C+ 
Sbjct: 263 GRLRLPRIRHLDLVQQELLCRHIGRDLMF--------DSMFGVCRGMSRMRGVPIPFCSA 314

Query: 381 ---NPRRGYAMYLASNAVLALRIIRLLRASIRHE---YTACIRMLSGDVQRLIR 428
              N    Y +YLASN+     +IR +R  +RHE   Y      L+ D  R +R
Sbjct: 315 EKLNLDLAYVLYLASNSYFLCFLIRTVRDVMRHEERAYGELCLGLARDAARALR 368



>gi|9628730|ref|NP_043761.1| Hypothetical protein [Human herpesvirus
           7]
 gi|1722827|sp|P52522|VU5_HSV7J U5 protein
 gi|7519669|pir||T41909 hypothetical protein U5/7 - human
           herpesvirus 7 (strain JI)
 gi|1139609|gb|AAC54669.1| HHV-6 U5/U7; U7 similar to HCMV US22 gene
           family
          Length = 865

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 88/410 (21%), Positives = 153/410 (36%), Gaps = 28/410 (6%)

Query: 102 MVYIRRSCLVHSACATAHGKYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRR 161
           +V +  S L++   A+A G++ I+GL L SD  +W  L             +  A  F  
Sbjct: 364 IVPVTESRLINGLQASAAGRFGIKGLRLCSDGVIWNRLIDYEYEMFKYPSTFTRADKFLL 423

Query: 162 LVHEAQYLPEISRAAKRIALAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLD 221
            + + +++ +     + I    A G Y   +L +        ++ R LC     L+ +LD
Sbjct: 424 QLRDLKFMEDFDPKWQCITKLAAVGFYSGASLFNLGAKPGIGYWCRYLCEYLSMLFFKLD 483

Query: 222 GTLCLFLEPEERELIGRCLPAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFC 281
           G L   L  E ++ +G    A        + + ++   FF   F  R +  L + +  FC
Sbjct: 484 GKL-KELSKESKQKLGGFSCAFWSESFKTEMQ-NKTESFFRRDFFDRFQLYLLEHFLLFC 541

Query: 282 ECGDGRDN--GGNHDGNHDGNDHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIR 339
            C + R N     + G    N      P +V  H                LG   LP   
Sbjct: 542 GCEECRYNFFRFKNVGTMKKN------PGSVKLHFFPA------------LGKIDLPIFP 583

Query: 340 HLTAGDVARVQDSVSRDLGFADWSQTLIDDYFLLPAGWACANPRRGYAMYLASNAVLALR 399
           HL+    + +   V++DL  +     +    F +         +R   + + SN V  L 
Sbjct: 584 HLSE-KYSNLSMFVAKDLCLSFIEGQIEHSRFPISVTVDMGQDKRN-LLNILSNIVFLLF 641

Query: 400 IIRLLRASIRHEYTACIRMLSGDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVH 459
           II+ L + +  E      +   +++ L    + E  L  KG   N V    L    K V 
Sbjct: 642 IIQTLNSVLFTELKMYYDVYLDELKNLESSMECEMKLGSKGCMNNIVYFNML----KQVK 697

Query: 460 DLKRIRFTEDTFVETFCDFLELVQRIPDYRSVSLRIKRELLCLHVFKLRR 509
           D+ R   T   F+    + +++   IP Y++       E   LH   ++R
Sbjct: 698 DIVRNPGTSSNFIFNCLEVIKMSFEIPYYKNYDETNFMESFYLHHLYIQR 747



>gi|2746239|gb|AAC40723.1| U7 [Human herpesvirus 7]
          Length = 871

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 88/410 (21%), Positives = 153/410 (36%), Gaps = 28/410 (6%)

Query: 102 MVYIRRSCLVHSACATAHGKYDIRGLTLESDLAVWAALRGVPLPPDPQHFRWLNAGAFRR 161
           +V +  S L++   A+A G++ I+GL L SD  +W  L             +  A  F  
Sbjct: 370 IVPVTESRLINGLQASAAGRFGIKGLRLCSDGVIWNRLIDYEYEMFKYPSTFTRADKFLL 429

Query: 162 LVHEAQYLPEISRAAKRIALAVATGQYVVCTLLDYKTFGTRTHYLRQLCSMTEELYLRLD 221
            + + +++ +     + I    A G Y   +L +        ++ R LC     L+ +LD
Sbjct: 430 QLRDLKFMEDFDPKWQCITKLAAVGFYSGASLFNLGAKPGIGYWCRYLCEYLSMLFFKLD 489

Query: 222 GTLCLFLEPEERELIGRCLPAALCRGLPVKYRTHRAAVFFHATFMARAEAALKDLYAAFC 281
           G L   L  E ++ +G    A        + + ++   FF   F  R +  L + +  FC
Sbjct: 490 GKL-KELSKESKQKLGGFSCAFWSESFKTEMQ-NKTESFFRRDFFDRFQLYLLEHFLLFC 547

Query: 282 ECGDGRDN--GGNHDGNHDGNDHSSLSPSAVASHHSRLEHAELRLERNRHLGAFHLPAIR 339
            C + R N     + G    N      P +V  H                LG   LP   
Sbjct: 548 GCEECRYNFFRFKNVGTMKKN------PGSVKLHFFPA------------LGKIDLPIFP 589

Query: 340 HLTAGDVARVQDSVSRDLGFADWSQTLIDDYFLLPAGWACANPRRGYAMYLASNAVLALR 399
           HL+    + +   V++DL  +     +    F +         +R   + + SN V  L 
Sbjct: 590 HLSE-KYSNLSMFVAKDLCLSFIEGQIEHSRFPISVTVDMGQDKRN-LLNILSNIVFLLF 647

Query: 400 IIRLLRASIRHEYTACIRMLSGDVQRLIRLFKGEAALLRKGLAQNPVQRRELSRFRKHVH 459
           II+ L + +  E      +   +++ L    + E  L  KG   N V    L    K V 
Sbjct: 648 IIQTLNSVLFTELKMYYDVYLDELKNLESSMECEMKLGSKGCMNNIVYFNML----KQVK 703

Query: 460 DLKRIRFTEDTFVETFCDFLELVQRIPDYRSVSLRIKRELLCLHVFKLRR 509
           D+ R   T   F+    + +++   IP Y++       E   LH   ++R
Sbjct: 704 DIVRNPGTSSNFIFNCLEVIKMSFEIPYYKNYDETNFMESFYLHHLYIQR 753



  Database: nr
    Posted date:  Aug 27, 2003 10:37 AM
  Number of letters in database: 485,782,529
  Number of sequences in database:  1,508,275
  
Lambda     K      H
   0.325    0.139    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 625,924,402
Number of Sequences: 1508275
Number of extensions: 27122710
Number of successful extensions: 103763
Number of sequences better than 1.0e-03: 9
Number of HSP's better than  0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 103726
Number of HSP's gapped (non-prelim): 17
length of query: 608
length of database: 485,782,529
effective HSP length: 130
effective length of query: 478
effective length of database: 289,706,779
effective search space: 138479840362
effective search space used: 138479840362
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 110 (47.0 bits)