BLASTP 2.2.4 [Aug-26-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= SAG1126
(228 letters)
Database: nr
1,487,057 sequences; 479,114,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22537284|ref|NP_688135.1| protein of unknown function [Strept... 410 e-114
gi|25011243|ref|NP_735638.1| Unknown [Streptococcus agalactiae N... 403 e-112
gi|15674912|ref|NP_269086.1| hypothetical protein [Streptococcus... 82 6e-15
gi|19745955|ref|NP_607091.1| hypothetical protein [Streptococcus... 82 6e-15
gi|21910142|ref|NP_664410.1| hypothetical protein [Streptococcus... 82 7e-15
>gi|22537284|ref|NP_688135.1| protein of unknown function
[Streptococcus agalactiae 2603V/R]
gi|22534153|gb|AAN00008.1|AE014243_14 protein of unknown function
[Streptococcus agalactiae 2603V/R]
Length = 228
Score = 410 bits (1055), Expect = e-114
Identities = 228/228 (100%), Positives = 228/228 (100%)
Query: 1 MKKFLKVFLTVLVLILIVGAGGLYFWNNHQSLEGKWRTVSLEKQVEKEIEQQLGSQAADM 60
MKKFLKVFLTVLVLILIVGAGGLYFWNNHQSLEGKWRTVSLEKQVEKEIEQQLGSQAADM
Sbjct: 1 MKKFLKVFLTVLVLILIVGAGGLYFWNNHQSLEGKWRTVSLEKQVEKEIEQQLGSQAADM 60
Query: 61 GISAADLVKGANMHMNVKNDEAKITVTAQIDEVKFHQAIKTFIDKALEKQLKDQGLTYND 120
GISAADLVKGANMHMNVKNDEAKITVTAQIDEVKFHQAIKTFIDKALEKQLKDQGLTYND
Sbjct: 61 GISAADLVKGANMHMNVKNDEAKITVTAQIDEVKFHQAIKTFIDKALEKQLKDQGLTYND 120
Query: 121 LSEAGKKIFDETKITDQQIDQQIDRSFQSAAQAAGGKYNTNTGEMTLPVMDGKVHRLTSV 180
LSEAGKKIFDETKITDQQIDQQIDRSFQSAAQAAGGKYNTNTGEMTLPVMDGKVHRLTSV
Sbjct: 121 LSEAGKKIFDETKITDQQIDQQIDRSFQSAAQAAGGKYNTNTGEMTLPVMDGKVHRLTSV 180
Query: 181 IKVSHINKKANAFYGNIVKNGEKTAYKKEGSKLILGNEKSYPFMKVTK 228
IKVSHINKKANAFYGNIVKNGEKTAYKKEGSKLILGNEKSYPFMKVTK
Sbjct: 181 IKVSHINKKANAFYGNIVKNGEKTAYKKEGSKLILGNEKSYPFMKVTK 228
>gi|25011243|ref|NP_735638.1| Unknown [Streptococcus agalactiae
NEM316]
gi|23095667|emb|CAD46853.1| Unknown [Streptococcus agalactiae
NEM316]
Length = 228
Score = 403 bits (1036), Expect = e-112
Identities = 224/228 (98%), Positives = 225/228 (98%)
Query: 1 MKKFLKVFLTVLVLILIVGAGGLYFWNNHQSLEGKWRTVSLEKQVEKEIEQQLGSQAADM 60
MKKFLKVFLTVLVLILIVGAGGLYFWNN QSLEGKWRTVSLEKQVEKEIEQQLGSQ ADM
Sbjct: 1 MKKFLKVFLTVLVLILIVGAGGLYFWNNRQSLEGKWRTVSLEKQVEKEIEQQLGSQVADM 60
Query: 61 GISAADLVKGANMHMNVKNDEAKITVTAQIDEVKFHQAIKTFIDKALEKQLKDQGLTYND 120
GISAADLVKGANMHMNVKNDEAKITVTAQIDEVKFHQAIKTFIDKALEKQLKDQGLTYND
Sbjct: 61 GISAADLVKGANMHMNVKNDEAKITVTAQIDEVKFHQAIKTFIDKALEKQLKDQGLTYND 120
Query: 121 LSEAGKKIFDETKITDQQIDQQIDRSFQSAAQAAGGKYNTNTGEMTLPVMDGKVHRLTSV 180
LSEAGKKIFDETKITD+QIDQQIDRSFQSAAQA GGKYNTNTGEMTLPVMDGKVHRLTSV
Sbjct: 121 LSEAGKKIFDETKITDKQIDQQIDRSFQSAAQAVGGKYNTNTGEMTLPVMDGKVHRLTSV 180
Query: 181 IKVSHINKKANAFYGNIVKNGEKTAYKKEGSKLILGNEKSYPFMKVTK 228
IKVSHINKKANAFYGNIVKNGEKTAYKKEGSKLILGNEKSYPFMKVTK
Sbjct: 181 IKVSHINKKANAFYGNIVKNGEKTAYKKEGSKLILGNEKSYPFMKVTK 228
>gi|15674912|ref|NP_269086.1| hypothetical protein [Streptococcus
pyogenes]
gi|13622053|gb|AAK33807.1| hypothetical protein [Streptococcus
pyogenes M1 GAS]
Length = 247
Score = 82.0 bits (201), Expect = 6e-15
Identities = 56/215 (26%), Positives = 111/215 (51%), Gaps = 5/215 (2%)
Query: 7 VFLTVLVLILIVGAGGLYFWNNHQSLEGKWRTVSLEKQVEKEIEQQLGSQAADMGISAAD 66
+F+ ++ LIL+ G+ + N+ S+EG WRT S+++++ + ++L I +
Sbjct: 22 LFVFIIFLILLAVLFGVRYRNS--SIEGIWRTTSIDQKLGDDFAKRLTGLHQSPLIDDS- 78
Query: 67 LVKGANMHMNVKNDEAKITVTAQIDEVKFHQAIKTFIDKALEKQLKDQGLTYNDLSEAGK 126
L+ + M + VKN+ ++ + Q++ F + + + L K LK+ L DLS +
Sbjct: 79 LLTSSQMILTVKNNNVDLSFSVQVERDIFVKRLAAYHQNELLKTLKENHLVVGDLSSKER 138
Query: 127 KIFDETKITDQQIDQQIDRSFQSAAQAAGGKYNTNTGEMTLPVMDGKVHRLTSVIKV-SH 185
+I + + +++ +D++F+ A GGKYN TG ++ V+ GKV+R+ I +
Sbjct: 139 QIIENSMPASHELEMILDQAFEKLASQIGGKYNQKTGHLSAVVLKGKVNRILHTIDIKEE 198
Query: 186 INKKANAFYGNIVKNGEKTAYKKEGSKL-ILGNEK 219
+ +F ++ Y + G KL +LG+EK
Sbjct: 199 VAAGHTSFSKGLLTPNGYFDYTRFGKKLELLGDEK 233
>gi|19745955|ref|NP_607091.1| hypothetical protein [Streptococcus
pyogenes MGAS8232]
gi|19748114|gb|AAL97590.1| hypothetical protein [Streptococcus
pyogenes MGAS8232]
Length = 247
Score = 82.0 bits (201), Expect = 6e-15
Identities = 56/215 (26%), Positives = 111/215 (51%), Gaps = 5/215 (2%)
Query: 7 VFLTVLVLILIVGAGGLYFWNNHQSLEGKWRTVSLEKQVEKEIEQQLGSQAADMGISAAD 66
+F+ ++ LIL+ G+ + N+ S+EG WRT S+++++ + ++L I +
Sbjct: 22 LFVFIIFLILLAVLFGVRYRNS--SIEGIWRTTSIDQKLGDDFAKRLTGLHQSPLIDDS- 78
Query: 67 LVKGANMHMNVKNDEAKITVTAQIDEVKFHQAIKTFIDKALEKQLKDQGLTYNDLSEAGK 126
L+ + M + VKN+ ++ + Q++ F + + + L K LK+ L DLS +
Sbjct: 79 LLTSSQMILTVKNNNVDLSFSVQVERDIFVKRLAAYHQNELLKTLKENHLVVGDLSSKER 138
Query: 127 KIFDETKITDQQIDQQIDRSFQSAAQAAGGKYNTNTGEMTLPVMDGKVHRLTSVIKV-SH 185
+I + + +++ +D++F+ A GGKYN TG ++ V+ GKV+R+ I +
Sbjct: 139 QIIENSMPASHELEMILDQAFEKLASQIGGKYNQKTGHLSAVVLKGKVNRILHTIDIKEE 198
Query: 186 INKKANAFYGNIVKNGEKTAYKKEGSKL-ILGNEK 219
+ +F ++ Y + G KL +LG+EK
Sbjct: 199 VAAGHTSFSKGLLTPNGYFDYTRFGKKLELLGDEK 233
>gi|21910142|ref|NP_664410.1| hypothetical protein [Streptococcus
pyogenes MGAS315]
gi|28896159|ref|NP_802509.1| hypothetical protein [Streptococcus
pyogenes SSI-1]
gi|21904335|gb|AAM79213.1| hypothetical protein [Streptococcus
pyogenes MGAS315]
gi|28811409|dbj|BAC64342.1| hypothetical protein [Streptococcus
pyogenes SSI-1]
Length = 248
Score = 82.0 bits (201), Expect = 7e-15
Identities = 56/215 (26%), Positives = 111/215 (51%), Gaps = 5/215 (2%)
Query: 7 VFLTVLVLILIVGAGGLYFWNNHQSLEGKWRTVSLEKQVEKEIEQQLGSQAADMGISAAD 66
+F+ ++ LIL+ G+ + N+ S+EG WRT S+++++ + ++L I +
Sbjct: 22 LFVFIIFLILLAVLFGVRYRNS--SIEGIWRTTSIDQKLGDDFAKRLTGLHQSPLIDDS- 78
Query: 67 LVKGANMHMNVKNDEAKITVTAQIDEVKFHQAIKTFIDKALEKQLKDQGLTYNDLSEAGK 126
L+ + M + VKN+ ++ + Q++ F + + + L K LK+ L DLS +
Sbjct: 79 LLTSSQMILTVKNNNVDLSFSVQVERDIFVKRLAAYHQNELLKTLKENHLVVGDLSSKER 138
Query: 127 KIFDETKITDQQIDQQIDRSFQSAAQAAGGKYNTNTGEMTLPVMDGKVHRLTSVIKV-SH 185
+I + + +++ +D++F+ A GGKYN TG ++ V+ GKV+R+ I +
Sbjct: 139 QIIENSMPASHELEMILDQAFEKLASQIGGKYNQKTGHLSAVVLKGKVNRILHTIDIKEE 198
Query: 186 INKKANAFYGNIVKNGEKTAYKKEGSKL-ILGNEK 219
+ +F ++ Y + G KL +LG+EK
Sbjct: 199 VAAGHTSFSKGLLTPNGYFDYTRFGKKLELLGDEK 233
Database: nr
Posted date: Aug 11, 2003 9:58 AM
Number of letters in database: 479,114,161
Number of sequences in database: 1,487,057
Lambda K H
0.314 0.131 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 193,961,085
Number of Sequences: 1487057
Number of extensions: 7355560
Number of successful extensions: 22146
Number of sequences better than 1.0e-04: 5
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22138
Number of HSP's gapped (non-prelim): 5
length of query: 228
length of database: 479,114,161
effective HSP length: 120
effective length of query: 108
effective length of database: 300,667,321
effective search space: 32472070668
effective search space used: 32472070668
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 114 (48.5 bits)