BLASTP 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= PGN_0187 hypothetical protein
(183 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
6,515,104 sequences; 2,222,278,849 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34541714|ref|NP_906193.1| hypothetical protein PG2139 [P... 315 6e-85
gi|154494314|ref|ZP_02033634.1| hypothetical protein PARMER... 125 1e-27
gi|150009041|ref|YP_001303784.1| hypothetical protein BDI_2... 123 7e-27
gi|160882374|ref|ZP_02063377.1| hypothetical protein BACOVA... 110 5e-23
gi|153809060|ref|ZP_01961728.1| hypothetical protein BACCAC... 108 2e-22
gi|29349240|ref|NP_812743.1| hypothetical protein BT_3832 [... 106 6e-22
gi|53715375|ref|YP_101367.1| hypothetical protein BF4091 [B... 106 9e-22
gi|60683342|ref|YP_213486.1| hypothetical protein BF3905 [B... 105 1e-21
gi|167753070|ref|ZP_02425197.1| hypothetical protein ALIPUT... 104 4e-21
gi|167765451|ref|ZP_02437564.1| hypothetical protein BACSTE... 102 9e-21
gi|150003046|ref|YP_001297790.1| hypothetical protein BVU_0... 102 2e-20
gi|160890559|ref|ZP_02071562.1| hypothetical protein BACUNI... 99 1e-19
gi|150026411|ref|YP_001297237.1| hypothetical protein FP238... 93 8e-18
gi|146298411|ref|YP_001193002.1| protein of unknown functio... 92 2e-17
gi|126662569|ref|ZP_01733568.1| hypothetical protein FBBAL3... 91 4e-17
gi|88804650|ref|ZP_01120170.1| hypothetical protein RB2501_... 91 5e-17
gi|89889702|ref|ZP_01201213.1| conserved hypothetical prote... 89 1e-16
gi|163754506|ref|ZP_02161628.1| riboflavin synthase subunit... 89 2e-16
gi|88711696|ref|ZP_01105784.1| hypothetical protein FB2170_... 89 2e-16
gi|86134881|ref|ZP_01053463.1| hypothetical protein MED152_... 87 4e-16
gi|149277465|ref|ZP_01883606.1| hypothetical protein PBAL39... 86 1e-15
gi|86144161|ref|ZP_01062498.1| hypothetical protein MED217_... 85 2e-15
gi|163786850|ref|ZP_02181298.1| hypothetical protein FBALC1... 84 6e-15
gi|86131467|ref|ZP_01050065.1| hypothetical protein MED134_... 82 2e-14
gi|91217014|ref|ZP_01253977.1| hypothetical protein P700755... 79 1e-13
gi|149369316|ref|ZP_01889168.1| hypothetical protein SCB49_... 77 5e-13
gi|83855888|ref|ZP_00949417.1| hypothetical protein CA2559_... 77 8e-13
gi|120437662|ref|YP_863348.1| protein containing DUF177 [Gr... 75 3e-12
gi|124005901|ref|ZP_01690739.1| conserved hypothetical prot... 72 2e-11
gi|88801925|ref|ZP_01117453.1| hypothetical protein PI23P_0... 69 1e-10
gi|126645678|ref|ZP_01718222.1| hypothetical protein ALPR1_... 67 6e-10
gi|110638028|ref|YP_678236.1| hypothetical protein CHU_1626... 64 4e-09
gi|171327458|ref|ZP_02915897.1| conserved hypothetical prot... 58 3e-07
gi|148927156|ref|ZP_01810782.1| protein of unknown function... 57 4e-07
>gi|34541714|ref|NP_906193.1| hypothetical protein PG2139 [Porphyromonas gingivalis W83]
gi|34398032|gb|AAQ67092.1| hypothetical protein PG_2139 [Porphyromonas gingivalis W83]
Length = 159
Score = 315 bits (808), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 156/159 (98%), Positives = 157/159 (98%)
Query: 25 LDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCIALDGTVKTACDRCLDEVEIPVKEE 84
+DDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCIALDGTVKTACDRCLDEVEI VKEE
Sbjct: 1 MDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCIALDGTVKTACDRCLDEVEILVKEE 60
Query: 85 NKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYEYSELAILMQRMHSDGECDPEMMNR 144
NKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYEYSELAI MQRMHSDGECDPEMMNR
Sbjct: 61 NKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYEYSELAIPMQRMHSDGECDPEMMNR 120
Query: 145 MSDLLAIDADEATEESGMTAHDSRWDSLGKLLEQKEQFK 183
MSDLLAIDADEATEESGMTAHDSRWDSLGKLLEQKEQFK
Sbjct: 121 MSDLLAIDADEATEESGMTAHDSRWDSLGKLLEQKEQFK 159
>gi|154494314|ref|ZP_02033634.1| hypothetical protein PARMER_03668 [Parabacteroides merdae ATCC
43184]
gi|154085758|gb|EDN84803.1| hypothetical protein PARMER_03668 [Parabacteroides merdae ATCC
43184]
Length = 195
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 104/192 (54%), Gaps = 14/192 (7%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M Y ++LK+L G H F+Y L++ FF + G + + V+R+ +F
Sbjct: 1 MGKFKLYNVDLKNLTPGIHEFEYLLENKFFVDIDGDQVQKGKVKVNLTVKRSSMMFEMNF 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYE 120
++G V CDRCLD++EIP+ N+LVV+FG Y E SD+++V+P EG ++L+ LYE
Sbjct: 61 QIEGVVMVPCDRCLDDMEIPIDTHNRLVVKFGKEYAEESDEVVVIPEDEGAINLAWFLYE 120
Query: 121 YSELAILMQRMHSDGECDPEMMNRMSDLLA--------------IDADEATEESGMTAHD 166
+ LAI M+ +H+ G+C+ M +++ A ++ D A ++ A D
Sbjct: 121 FIALAIPMKHVHAPGKCNKAMSSKLKKHTARSTEDGDEEYEDDSVEEDIAIDDDVPVATD 180
Query: 167 SRWDSLGKLLEQ 178
RWD L LLE
Sbjct: 181 PRWDGLKGLLEN 192
>gi|150009041|ref|YP_001303784.1| hypothetical protein BDI_2437 [Parabacteroides distasonis ATCC
8503]
gi|149937465|gb|ABR44162.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
Length = 196
Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 15/193 (7%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M Y ++LK+L G H F+Y L++ FF ++ G + + V+R+ +F
Sbjct: 1 MGKFKLYNVDLKNLSPGVHEFEYLLENKFFVDIDGTEVQKGKVKVHLTVKRSSMMFEMNF 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYE 120
++G V CDRCLD +EIP+ N+LVV+FG Y E SD+++V+P EG ++L+ LYE
Sbjct: 61 QIEGVVVVPCDRCLDNMEIPIDTHNRLVVKFGKEYAEESDEVVVIPEEEGAINLAWFLYE 120
Query: 121 YSELAILMQRMHSDGECDPEMMNRMSDLLAIDA--------------DEATEESG-MTAH 165
+ LA+ M+ +H+ G+C+ M +++ A + D A E+ G +
Sbjct: 121 FIALAVPMKHVHAPGKCNKAMSSKLKKHTARSSDETEDDFEDDMGGDDLALEDDGNASPA 180
Query: 166 DSRWDSLGKLLEQ 178
D RWD+L LLE
Sbjct: 181 DPRWDALKGLLEN 193
>gi|160882374|ref|ZP_02063377.1| hypothetical protein BACOVA_00323 [Bacteroides ovatus ATCC 8483]
gi|156112187|gb|EDO13932.1| hypothetical protein BACOVA_00323 [Bacteroides ovatus ATCC 8483]
Length = 192
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 103/191 (53%), Gaps = 13/191 (6%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M +Y ++LK + ++++ LD+ +F ++ G + + V+R F
Sbjct: 1 MGKFDKYKIDLKGMQTDSAKYEFVLDNLYFAHIDGPEVQKGKVNVTLTVKRTSRAFELSF 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYE 120
+G V CDRCLD++E+P+ +KL+V+FG Y E D+L+V+P EG ++++ +YE
Sbjct: 61 QTEGMVSVPCDRCLDDMELPISSSDKLMVKFGHEYAEEGDNLIVIPEEEGEINVAWFMYE 120
Query: 121 YSELAILMQRMHSDGECDPEMMNRMSDLLAIDADEATEESGMTAH-------------DS 167
+ L++ M+ +H+ G+C+ M +++ L +A+E ++++ T D
Sbjct: 121 FVALSVPMKHVHAPGKCNKAMTGKLNKHLKTNANEDSDDTFDTGGDDIVIEEEVEEQIDP 180
Query: 168 RWDSLGKLLEQ 178
RW+ L K+L+
Sbjct: 181 RWNELKKILDN 191
>gi|153809060|ref|ZP_01961728.1| hypothetical protein BACCAC_03368 [Bacteroides caccae ATCC 43185]
gi|149128393|gb|EDM19612.1| hypothetical protein BACCAC_03368 [Bacteroides caccae ATCC 43185]
Length = 179
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
Query: 20 RFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCIALDGTVKTACDRCLDEVEI 79
++++ LD+ +F ++ G + + V+R F DG V CDRCLD++E+
Sbjct: 7 KYEFVLDNLYFAHIDGPEVQKGKVNVTLNVKRTSRAFELSFQTDGMVWVPCDRCLDDMEL 66
Query: 80 PVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYEYSELAILMQRMHSDGECDP 139
P+ +KL+V+FG Y E ++L+V+P EG ++++ +YE+ L+I M+ +H+ G+C+
Sbjct: 67 PISSSDKLMVKFGHEYAEEGENLIVIPEEEGEINVAWFMYEFIALSIPMKHVHAPGKCNK 126
Query: 140 EMMNRMSDLLAIDADEATEESGMTAH-------------DSRWDSLGKLLEQ 178
M +++S L +A+E ++E T D RW+ L K+L+
Sbjct: 127 AMTSKLSKHLKTNANEDSDEVFDTGGDDIVIEEEVEEQIDPRWNELKKILDN 178
>gi|29349240|ref|NP_812743.1| hypothetical protein BT_3832 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341148|gb|AAO78937.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 179
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 94/172 (54%), Gaps = 13/172 (7%)
Query: 20 RFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCIALDGTVKTACDRCLDEVEI 79
++++ LD+ +F ++ G + + V+R F DG V CDRCLDE+E+
Sbjct: 7 KYEFVLDNLYFAHIDGPEVQKGKVNVTLTVKRTSRAFELSFQTDGIVWVPCDRCLDEMEL 66
Query: 80 PVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYEYSELAILMQRMHSDGECDP 139
+ +KL+V+FG Y E D+L+V+P EG ++++ +YE+ L+I M+ +H+ G+C+
Sbjct: 67 QITSSDKLMVKFGHEYAEEGDNLIVIPEEEGEINVAWFMYEFVALSIPMKHVHAPGKCNK 126
Query: 140 EMMNRMSDLLAIDADEATEESGMTAH-------------DSRWDSLGKLLEQ 178
+ +++S L DA+E ++E T D RW+ L K+L+
Sbjct: 127 AVTSKLSKHLKTDANEDSDEVFDTGGDDIVVAEEMEEQIDPRWNELKKILDN 178
>gi|53715375|ref|YP_101367.1| hypothetical protein BF4091 [Bacteroides fragilis YCH46]
gi|52218240|dbj|BAD50833.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 178
Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 92/171 (53%), Gaps = 12/171 (7%)
Query: 20 RFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCIALDGTVKTACDRCLDEVEI 79
++++ LD+ FF ++ G + ++ V++ F +G V CDRCLDE+E
Sbjct: 7 KYEFLLDNLFFAHIDGPEVQKGKVNVELTVKKTSRAFELSFQTEGIVWVPCDRCLDEMEQ 66
Query: 80 PVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYEYSELAILMQRMHSDGECDP 139
PV +KL+V+FG Y E D+L+V+P EG ++++ +YE+ LAI M+ +H+ G+C+
Sbjct: 67 PVTSSDKLMVKFGHEYAEEGDNLIVIPEEEGEINVAWFMYEFIALAIPMKHVHAPGKCNK 126
Query: 140 EMMNRMSDLLAIDADEATEESGMTAH------------DSRWDSLGKLLEQ 178
+ ++++ L D+ EES D RW+ L K+L+
Sbjct: 127 AVTSKLNKHLRTSGDDDAEESFGAGEDIVVEDEAEEQIDPRWNELKKILDN 177
>gi|60683342|ref|YP_213486.1| hypothetical protein BF3905 [Bacteroides fragilis NCTC 9343]
gi|60494776|emb|CAH09582.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
Length = 178
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 92/171 (53%), Gaps = 12/171 (7%)
Query: 20 RFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCIALDGTVKTACDRCLDEVEI 79
++++ LD+ FF ++ G + ++ V++ F +G V CDRCLDE+E
Sbjct: 7 KYEFLLDNLFFAHIDGPEVQKGKVNVELTVKKTSRAFELSFRTEGIVWVPCDRCLDEMEQ 66
Query: 80 PVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYEYSELAILMQRMHSDGECDP 139
PV +KL+V+FG Y E D+L+V+P EG ++++ +YE+ LAI M+ +H+ G+C+
Sbjct: 67 PVTSSDKLMVKFGHEYAEEGDNLIVIPEEEGEINVAWFMYEFIALAIPMKHVHAPGKCNK 126
Query: 140 EMMNRMSDLLAIDADEATEESGMTAH------------DSRWDSLGKLLEQ 178
+ ++++ L D+ EES D RW+ L K+L+
Sbjct: 127 AVTSKLNKHLRTSGDDDAEESFGAGEDIVVEDEAEEQIDPRWNELKKILDN 177
>gi|167753070|ref|ZP_02425197.1| hypothetical protein ALIPUT_01340 [Alistipes putredinis DSM 17216]
gi|167659384|gb|EDS03514.1| hypothetical protein ALIPUT_01340 [Alistipes putredinis DSM 17216]
Length = 193
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 81/145 (55%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M ++ +Y + K L +G+H FD+E D F + +I GG KV + R I
Sbjct: 1 MNAARKYSIAWKGLSEGEHTFDFEAGDDLFRLFENTEIKGGHCDVKVNLLRAARQLRLEI 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYE 120
++ G+V CDRCL + +P+ E +L+V+F D +E D L + SE +DL+ +YE
Sbjct: 61 SIRGSVVVECDRCLGDCSVPIDYEGELLVKFSDEVREYDGDTLWLSPSEDFVDLTQYIYE 120
Query: 121 YSELAILMQRMHSDGECDPEMMNRM 145
L++ QR+H DGECDP+M+ R
Sbjct: 121 SIVLSLPYQRVHPDGECDPDMLGRF 145
>gi|167765451|ref|ZP_02437564.1| hypothetical protein BACSTE_03841 [Bacteroides stercoris ATCC
43183]
gi|167697079|gb|EDS13658.1| hypothetical protein BACSTE_03841 [Bacteroides stercoris ATCC
43183]
Length = 193
Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 14/192 (7%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M +Y ++LK + ++++ LD+ FF ++ G + + V++ F
Sbjct: 1 MGKFDKYKIDLKGMQADSCKYEFVLDNLFFANIDGPEVQKGKVNVVLVVKKTSRAFELNF 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYE 120
DG V CDRCLD++E V +KL+V+FG Y E D+L+V+P EG ++++ +YE
Sbjct: 61 QTDGMVWVPCDRCLDDMEQLVSSTDKLLVKFGHEYAEEGDNLIVIPEEEGEINVAWFMYE 120
Query: 121 YSELAILMQRMHSDGECDPEMMNRMSDLLAI--------------DADEATEESGMTAHD 166
+ LAI M+ +H+ G+C+ M +++S L D+DE + TA D
Sbjct: 121 FIALAIPMKHVHAPGKCNKAMSSKLSKHLRTTPDDEMDEDSFVSEDSDELANDDTETAVD 180
Query: 167 SRWDSLGKLLEQ 178
RWD L K+L+
Sbjct: 181 PRWDELKKILDN 192
>gi|150003046|ref|YP_001297790.1| hypothetical protein BVU_0453 [Bacteroides vulgatus ATCC 8482]
gi|149931470|gb|ABR38168.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 180
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 95/180 (52%), Gaps = 13/180 (7%)
Query: 11 LKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCIALDGTVKTAC 70
+K++ ++++ LD+ FF ++ G LA ++ V++ VF +G V C
Sbjct: 1 MKNMKADSAKYEFTLDNQFFVDLDGPEVQKGKLAVELNVKKTSGVFLLDFQTEGFVIVPC 60
Query: 71 DRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYEYSELAILMQR 130
DRCLDE+E+PV +KL V+ G S+ E D++VVP +G ++++ LYE+ L I M+
Sbjct: 61 DRCLDEMELPVSTSDKLKVKLGSSFAE-EGDIVVVPEEDGYINIAWFLYEFIALNIPMKH 119
Query: 131 MHSDGECDPEMMNRMSDLLAIDA------------DEATEESGMTAHDSRWDSLGKLLEQ 178
+H+ G+C+ M+ ++S L I A E G D RW+ L K+L+
Sbjct: 120 VHAPGKCNKGMVGKLSKHLRISADDEDDDDIAVELPEGDISEGPQEIDPRWNELKKILDN 179
>gi|160890559|ref|ZP_02071562.1| hypothetical protein BACUNI_03002 [Bacteroides uniformis ATCC 8492]
gi|156859558|gb|EDO52989.1| hypothetical protein BACUNI_03002 [Bacteroides uniformis ATCC 8492]
Length = 192
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 13/191 (6%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M +Y ++LK + ++++ LD+ FF ++ G + + V++ F
Sbjct: 1 MGKFDKYKIDLKGMQADSCKYEFVLDNLFFANIDGPEVQKGKVNVVLVVKKTSRAFELNF 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYE 120
DG V CDRCLD++E V +KL+V+FG Y E D+L+V+P EG ++++ +YE
Sbjct: 61 QTDGMVWVPCDRCLDDMEQLVSSTDKLLVKFGHEYAEEGDNLIVIPEEEGEINVAWFMYE 120
Query: 121 YSELAILMQRMHSDGECDPEMMNRMSDLLAIDADEATEESGM-------------TAHDS 167
+ LAI M+ +H+ G+C+ M +++S + D+ E T D
Sbjct: 121 FVALAIPMKHVHAPGKCNKAMTSKLSKHMRTTPDDDMAEDTFAPEEEVELMNEEETQVDP 180
Query: 168 RWDSLGKLLEQ 178
RWD L K+L+
Sbjct: 181 RWDELKKILDN 191
>gi|150026411|ref|YP_001297237.1| hypothetical protein FP2381 [Flavobacterium psychrophilum JIP02/86]
gi|149772952|emb|CAL44436.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
Length = 187
Score = 93.2 bits (230), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 8/187 (4%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M + +++ L GKH+F+Y++ +FF + + + +E+ +
Sbjct: 1 MKVTNEFLIPFIGLKLGKHQFEYQISKAFFSHFEFDEFESANIKVSIVLEKKNTMLELNF 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYE 120
GT+ CD +E ++P+ KL+VRFG+ + + ++DLL++P+ E +D+S +YE
Sbjct: 61 NHSGTINVPCDLTSEEFDLPINGNLKLIVRFGEIFNDENEDLLILPIGEHQVDVSQYIYE 120
Query: 121 YSELAILMQRMH---SDGECDPEMMNRMSDLLAIDA---DEATEESGMTAH--DSRWDSL 172
L+I ++++H DG + E ++++ ++ + + EE+ + A D RWD L
Sbjct: 121 MVVLSIPLKKIHPGIQDGTLETEALSKLKEISVTEQAQDENVQEETEIKAENTDPRWDKL 180
Query: 173 GKLLEQK 179
LL K
Sbjct: 181 KTLLTDK 187
>gi|146298411|ref|YP_001193002.1| protein of unknown function DUF177 [Flavobacterium johnsoniae
UW101]
gi|146152829|gb|ABQ03683.1| protein of unknown function DUF177 [Flavobacterium johnsoniae
UW101]
Length = 180
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 96/182 (52%), Gaps = 5/182 (2%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M+ S +++ L GKH F+Y++D++FF+ + + + ++ ++
Sbjct: 1 MSKSKEFLIPFVGLKLGKHHFEYQIDNTFFKDFEYDEFQSADIKVDLIFDKKSNMLELEF 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYE 120
GTV CD ++ ++P+K + KL+VRFGD + + +++LL++P E LD+S +YE
Sbjct: 61 KHKGTVNVPCDLTSEDFDLPLKGKMKLIVRFGDEFNDDNEELLILPHGEHELDVSQYIYE 120
Query: 121 YSELAILMQRMH---SDGECDPEMMNRMSDLLAIDADEATEESGMTAHDSRWDSLGKLLE 177
L++ +R+H DG E +N++++L ++ E D RW+ L KLL
Sbjct: 121 MIALSVPQKRIHPGVKDGTLQTEALNKLNELSV--KEQKEESKQEEDIDPRWEKLKKLLT 178
Query: 178 QK 179
K
Sbjct: 179 DK 180
>gi|126662569|ref|ZP_01733568.1| hypothetical protein FBBAL38_04420 [Flavobacteria bacterium BAL38]
gi|126625948|gb|EAZ96637.1| hypothetical protein FBBAL38_04420 [Flavobacteria bacterium BAL38]
Length = 179
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 102/182 (56%), Gaps = 6/182 (3%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEV--ERNGDVFNF 58
M + Y++ L GKH+FDY++D++FFE S YD ++ KV++ E+ +
Sbjct: 1 MNNLKEYLIPFVGLKLGKHQFDYQIDNTFFE-SFDYDEF-NNVSVKVDIVLEKKSTMLEL 58
Query: 59 CIALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLL 118
GTV CD +E ++P+K + KL+V+FGD++ + +++LL++P E ++++ +
Sbjct: 59 DFKHKGTVNVPCDVSGEEFDLPIKGKLKLLVKFGDAFNDDNEELLILPHGEFQVNVAQYI 118
Query: 119 YEYSELAILMQRMHSDGECDPEMMNRMSDLLAIDADE-ATEESGMTAHDSRWDSLGKLLE 177
YE L++ ++R+H G D + + + L ++ E EE D RW++L KLL
Sbjct: 119 YESIILSVPLRRVHP-GIKDGSLTHVIEKLESLSPGENKKEEEQNNDIDPRWENLKKLLT 177
Query: 178 QK 179
K
Sbjct: 178 DK 179
>gi|88804650|ref|ZP_01120170.1| hypothetical protein RB2501_07350 [Robiginitalea biformata
HTCC2501]
gi|88785529|gb|EAR16698.1| hypothetical protein RB2501_07350 [Robiginitalea biformata
HTCC2501]
Length = 177
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 96/176 (54%), Gaps = 10/176 (5%)
Query: 9 LNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEV-ERNGDVFNFCIALDGTVK 67
+ L QGKH F+Y++D++FF+ S YD + A V V E+ + + G+V
Sbjct: 8 IPFSGLKQGKHHFEYQIDNTFFD-SFDYDEFNASDIAVVAVLEKMSTMMELTMQATGSVH 66
Query: 68 TACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYEYSELAIL 127
CD + + PV KLVV+FG+++ + D++LV+P E +++ ++E LA+
Sbjct: 67 VNCDITNEPFDQPVAGNLKLVVKFGEAFNDEDDEILVLPHGEHQFNIAQYVFEMLALAVP 126
Query: 128 MQRMH---SDGECDPEMMNRMSDLLAIDADEATEESGMTAHDSRWDSLGKLLEQKE 180
+R+H +DG D E++ ++ +L + +E +++ D RWD+L LL K+
Sbjct: 127 SKRIHPGVADGTLDSEVLRKLEELQPKENNEQKDDT-----DPRWDALRNLLTDKK 177
>gi|89889702|ref|ZP_01201213.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
gi|89517975|gb|EAS20631.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
Length = 190
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 92/172 (53%), Gaps = 5/172 (2%)
Query: 7 YVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCIALDGTV 66
+ ++ L QGKH+F YE+D++FFE G D L + +++ + + G++
Sbjct: 15 FNISFVGLKQGKHQFLYEVDNTFFENYGFEDFNSSQLNVEATLDKKSTIMELHLEASGSI 74
Query: 67 KTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYEYSELAI 126
CD + ++ ++ E ++++FG Y + +++LL++P L++S +YE L I
Sbjct: 75 NVNCDVTNEPFDLDIETEMDVIIKFGPEYNDDNEELLILPHGAYELNISQFVYEMLVLGI 134
Query: 127 LMQRMHS---DGECDPEMMNRMSDLLAIDADEATEESGMTAHDSRWDSLGKL 175
++R+H DG D E+++++ +L + D E + D RWD+L K+
Sbjct: 135 PLKRVHPGVEDGSLDSELLDKLEELQPKNLDIV--EDNKESTDPRWDALKKI 184
>gi|163754506|ref|ZP_02161628.1| riboflavin synthase subunit alpha [Kordia algicida OT-1]
gi|161325447|gb|EDP96774.1| riboflavin synthase subunit alpha [Kordia algicida OT-1]
Length = 178
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 89/173 (51%), Gaps = 7/173 (4%)
Query: 7 YVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCIALDGTV 66
+ + L +GKH+FDY++D+SFFE + + A +E + + GTV
Sbjct: 6 FTIPFIGLKEGKHQFDYQIDNSFFELFNFDEFNATAVKATLEFHKKQTMLELTFNASGTV 65
Query: 67 KTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYEYSELAI 126
CD + E PV+ L+V+FG Y + ++++L++P E ++++ +YE L++
Sbjct: 66 NVHCDLTNEPFEQPVEGTLDLIVKFGHEYNDENEEILIIPHGEYEINVAQYIYEMIVLSV 125
Query: 127 LMQRMHS---DGECDPEMMNRMSDLLAIDADEATEESGMTAHDSRWDSLGKLL 176
+R+H DG E++ ++ +L + T+E D RW++L KLL
Sbjct: 126 PSKRIHPGIEDGTLQSEILEKLEELQPGTEKKETKEEI----DPRWNTLKKLL 174
>gi|88711696|ref|ZP_01105784.1| hypothetical protein FB2170_06260 [Flavobacteriales bacterium
HTCC2170]
gi|88710637|gb|EAR02869.1| hypothetical protein FB2170_06260 [Flavobacteriales bacterium
HTCC2170]
Length = 176
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 8/170 (4%)
Query: 9 LNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCIALDGTVKT 68
+ L QGKH FDY +++ FFE G + + V + + + + +G+V
Sbjct: 8 IPFSGLKQGKHEFDYYIENKFFESFGYDEFNASHVNLHVVLHKMSTMLELYMQAEGSVNV 67
Query: 69 ACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYEYSELAILM 128
CD + + + E +LVV+FGD Y + +D++L++P +E ++++ +YE LA+
Sbjct: 68 YCDTTGEPFDQKISGELELVVKFGDEYNDENDEILIIPHAEHQVNIAQYIYEMLVLAVPQ 127
Query: 129 QRMHS---DGECDPEMMNRMSDLLAIDADEATEESGMTAHDSRWDSLGKL 175
+R+H DG + E + ++ +L + E E++ D RWD L KL
Sbjct: 128 KRVHPGVLDGTLESETLKKLEELSPKEEKENKEDT-----DPRWDELKKL 172
>gi|86134881|ref|ZP_01053463.1| hypothetical protein MED152_09215 [Tenacibaculum sp. MED152]
gi|85821744|gb|EAQ42891.1| hypothetical protein MED152_09215 [Polaribacter dokdonensis MED152]
Length = 178
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M ++ + L +GKH F+Y +D+ FFE D ++ + + +F
Sbjct: 1 MKDLKQFNIQFVGLKEGKHEFNYSIDNKFFEAFNFDDFESASIKVSLYFVKKSTLFELTF 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYE 120
+GTV+ CD + + + E LVV+FG Y + ++++L++P +++ +YE
Sbjct: 61 IAEGTVEVPCDVTNELYDQEIDSELPLVVKFGPEYNDDNEEILILPHEAYEFNVAQFIYE 120
Query: 121 YSELAILMQRMHS---DGECDPEMMNRMSDLLAIDADEATEESGMTAHDSRWDSLGKLLE 177
LA+ +R+H DG + E +N++ +L E EE + D RWD L L+
Sbjct: 121 MIVLAVPNKRVHPKVLDGTMESEALNKLKEL------EIKEEKTVETTDPRWDKLKNLIT 174
Query: 178 QKE 180
+K+
Sbjct: 175 EKK 177
>gi|149277465|ref|ZP_01883606.1| hypothetical protein PBAL39_04738 [Pedobacter sp. BAL39]
gi|149231698|gb|EDM37076.1| hypothetical protein PBAL39_04738 [Pedobacter sp. BAL39]
Length = 177
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 11/181 (6%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M ++ + L GKH+FD+++D+SFF+ + G L A +E+++ +
Sbjct: 1 MKPLKQFSIPFTGLKIGKHQFDFDIDNSFFDSFEYSLVKKGNLKADIELDKQETMLILKF 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLS--EGTLDLSSLL 118
+ GT+ CD+CL E P+ E + +V+F + E SDDL ++ L+ E LD+S L+
Sbjct: 61 HIQGTIVLDCDKCLSEFNAPLDIEERQIVKFAEDELE-SDDLEIIVLNKKESELDVSGLI 119
Query: 119 YEYSELAILMQRM---HSDGE-CDPEMMNRMSDLLAIDADEATEESGMTAHDSRWDSLGK 174
YE+ +++ ++ + DG+ CD EM+ R+ A E+ D RW +L K
Sbjct: 120 YEFINVSVPYIKICEQNGDGQKCDEEMIARLESFTA----GTQEQEDKQDDDPRWAALKK 175
Query: 175 L 175
L
Sbjct: 176 L 176
>gi|86144161|ref|ZP_01062498.1| hypothetical protein MED217_18621 [Flavobacterium sp. MED217]
gi|85829423|gb|EAQ47888.1| hypothetical protein MED217_18621 [Leeuwenhoekiella blandensis
MED217]
Length = 199
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 4/180 (2%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M Y + L QG+H F YE+D++FFE D + KV + + + F
Sbjct: 17 MKHLKTYTIQFVGLKQGEHDFQYEIDNTFFEHFDYDDFNSIAVDLKVTLIKKSTLMEFYF 76
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYE 120
+GTV CD + + P++ KLVV+FG Y + DD+L++P E ++++ +YE
Sbjct: 77 DAEGTVNVNCDLTNEPYDNPLETSYKLVVKFGQEYNDEIDDILILPHGEYEVNIAQYIYE 136
Query: 121 YSELAILMQRMHS---DGECDPEMMNRMSDLLAIDADEATEESGMTAH-DSRWDSLGKLL 176
LA+ +R+H DG ++++++ +L D E E+ D RWD L L
Sbjct: 137 TLVLAMPAKRVHPGVEDGTLKSDILDKLEELSIKDNQEEEEQEPQPKEIDPRWDKLKDFL 196
>gi|163786850|ref|ZP_02181298.1| hypothetical protein FBALC1_16732 [Flavobacteriales bacterium
ALC-1]
gi|159878710|gb|EDP72766.1| hypothetical protein FBALC1_16732 [Flavobacteriales bacterium
ALC-1]
Length = 183
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 93/183 (50%), Gaps = 8/183 (4%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGT-LAAKVEVERNGDVFNFC 59
M + Y++ L G+H FDY++D++FF Q YD + ++ E+ +
Sbjct: 5 MKALKEYIIPFVGLKVGEHHFDYQIDNTFF-QKFEYDEFNAVDVKIDLKFEKKTTLLELY 63
Query: 60 IALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLY 119
+ G+V CD + + ++ KLVV+FG+ Y ++++L+VP E ++++ +Y
Sbjct: 64 FSASGSVNVNCDITNEPYNQAINDQYKLVVKFGNEYNNDNEEILIVPHGEYEINVAHYIY 123
Query: 120 EYSELAILMQRMHS---DGECDPEMMNRMSDLLAIDADEATEESGMTAHDSRWDSLGKLL 176
E LA+ +R+H DG ++++++ +L ++ + D RW++L KLL
Sbjct: 124 ELIVLAVPTKRIHPGIEDGTLQSDILSKLEELSPGKENKTKSSEDI---DPRWNNLKKLL 180
Query: 177 EQK 179
K
Sbjct: 181 TDK 183
>gi|86131467|ref|ZP_01050065.1| hypothetical protein MED134_00635 [Cellulophaga sp. MED134]
gi|85817912|gb|EAQ39080.1| hypothetical protein MED134_00635 [Dokdonia donghaensis MED134]
Length = 190
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 6/176 (3%)
Query: 7 YVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCIALDGTV 66
Y + L +G+H F+Y + SFF+ D ++ A + + + F + GT+
Sbjct: 18 YTIQYVGLKEGEHTFEYTITKSFFDLFNYDDFNDASVEATLLLTKKSTFMEFDFNISGTI 77
Query: 67 KTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYEYSELAI 126
CD + + PV +LVV+FG + + +D+L++P E ++++ +YE L++
Sbjct: 78 NVNCDVTNEPYDQPVSGSYELVVKFGQEFNDDIEDVLILPFGEYEVNVAQYIYELIVLSM 137
Query: 127 LMQRMH---SDGECDPEMMNRMSDLLAIDADEATEESGMTAHDSRWDSLGKLLEQK 179
+R+H +DG +++ ++ + L+I A EE T D RWDSL KLL K
Sbjct: 138 PNKRVHPGIADGTLKSDILEKLEE-LSIPDQRAKEEKEET--DPRWDSLKKLLTDK 190
>gi|91217014|ref|ZP_01253977.1| hypothetical protein P700755_11155 [Psychroflexus torquis ATCC
700755]
gi|91184885|gb|EAS71265.1| hypothetical protein P700755_11155 [Psychroflexus torquis ATCC
700755]
Length = 175
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 9/181 (4%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M Y + L +HRFDY++D+SFFE + ++ +E+ + ++
Sbjct: 1 MRKFKAYAIPFVGLKVEQHRFDYKIDNSFFELFDFNEFNNADVSVDLELTKKANMLELEF 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYE 120
G V CD L+ + LVV+FGD Y +++LL++P S+ +++ +YE
Sbjct: 61 EFTGHVNVNCDLTLEPYNQQISNHLSLVVKFGDDYNNDNEELLILPHSDYEVEIQQYIYE 120
Query: 121 YSELAILMQRMHS---DGECDPEMMNRMSDLLAIDADEATEESGMTAHDSRWDSLGKLLE 177
L + +R+H DG E++ ++++L ++ T+E D RWD L +LL
Sbjct: 121 GIILGLPAKRVHPGVEDGSIKSEILEKLNEL---QPEQNTKEEDT---DPRWDKLKELLN 174
Query: 178 Q 178
+
Sbjct: 175 E 175
>gi|149369316|ref|ZP_01889168.1| hypothetical protein SCB49_05812 [unidentified eubacterium SCB49]
gi|149356743|gb|EDM45298.1| hypothetical protein SCB49_05812 [unidentified eubacterium SCB49]
Length = 181
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 4/182 (2%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M + + L G+HRFD+++++ FFE + L V +++ + F +
Sbjct: 1 MRELKEFTIPFVGLKLGEHRFDFKINNKFFEHFEYDEFNDVDLNLDVLLDKKTTLLEFTL 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYE 120
+GT CD + + + +V+FGD + ++DLL++P +++ +YE
Sbjct: 61 EYNGTANVFCDVTNEPFDQELSGNYHFIVKFGDEFNNENEDLLIIPHGSYEVNIQQYIYE 120
Query: 121 YSELAILMQRMHS---DGECDPEMMNRMSDLLAIDADEATEESGMTAHDSRWDSLGKLLE 177
L + +R+H DG ++++++ + L+ A++ + + D RWDSL KLL
Sbjct: 121 SVILNLPTRRIHPGIEDGTLKSDILDKLKE-LSPGANKENKSTSKEKTDPRWDSLKKLLN 179
Query: 178 QK 179
K
Sbjct: 180 DK 181
>gi|83855888|ref|ZP_00949417.1| hypothetical protein CA2559_02335 [Croceibacter atlanticus
HTCC2559]
gi|83849688|gb|EAP87556.1| hypothetical protein CA2559_02335 [Croceibacter atlanticus
HTCC2559]
Length = 175
Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 89/182 (48%), Gaps = 10/182 (5%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M + + L GKH+F+Y + SFF+ + + ++ E+ +F
Sbjct: 1 MKQLKEFTIPFVGLKVGKHQFNYTIGQSFFDVFEYDEFNDANVNVTLDFEKKPTMFELLF 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYE 120
+ GTV D + + P++ E KLVV+FG + + +++LL++P E +++ +YE
Sbjct: 61 HISGTVNVNGDLTNEPYDQPIENELKLVVKFGPEFNDENEELLILPHGEYEINVQQYIYE 120
Query: 121 YSELAILMQRMHS---DGECDPEMMNRMSDLLAIDADEATEESGMTAHDSRWDSLGKLLE 177
LA+ ++R+H DG +++ ++ +L + ++ D RW+ L +LL+
Sbjct: 121 AIVLAVPLKRIHPGIEDGTLKTDVLKKLEEL-------SPKQKENEEVDPRWNKLKELLK 173
Query: 178 QK 179
K
Sbjct: 174 DK 175
>gi|120437662|ref|YP_863348.1| protein containing DUF177 [Gramella forsetii KT0803]
gi|117579812|emb|CAL68281.1| protein containing DUF177 [Gramella forsetii KT0803]
Length = 177
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 7/181 (3%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M + + + K L GKH+F+YELD+ FFE + + + E+ +
Sbjct: 1 MRNLAEFTIPFKGLKLGKHQFEYELDNRFFEHFEYEEFNSADVKIDLLFEKKSTMMELTF 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYE 120
GTV CD + + P+ E LV++FGD + +DLL++P + +++ +YE
Sbjct: 61 RATGTVNVNCDLTNEPYDQPIDSELFLVIKFGDEFNNEDEDLLILPHGDYEVNIQQYVYE 120
Query: 121 YSELAILMQRMHS---DGECDPEMMNRMSDLLAIDADEATEESGMTAHDSRWDSLGKLLE 177
L++ +R+H DG + E+++++ +L + + E+ D RWD L LL
Sbjct: 121 LVVLSVPPKRIHPGVEDGTLESEVLDKLEELSLKNQKKKKEDDI----DPRWDKLKNLLN 176
Query: 178 Q 178
+
Sbjct: 177 E 177
>gi|124005901|ref|ZP_01690739.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123988584|gb|EAY28225.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 186
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 71/132 (53%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M Y + L + GKHR+++ FF + + G +++E++ +
Sbjct: 1 MKEIANYNIELFKMALGKHRYEFNSRSDFFTAFPNSLVQKGEFNVLLDLEKSETLLKLDF 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYE 120
+ G ++ CDR L+ + P +EE L+++FGD + L+D++ ++ + T++++ +YE
Sbjct: 61 QIQGKLELECDRSLELFDFPFEEERSLILKFGDHSEALTDEIEIINRDKQTINIAQYVYE 120
Query: 121 YSELAILMQRMH 132
+ LAI M+++H
Sbjct: 121 FIGLAIPMKKLH 132
>gi|88801925|ref|ZP_01117453.1| hypothetical protein PI23P_04662 [Polaribacter irgensii 23-P]
gi|88782583|gb|EAR13760.1| hypothetical protein PI23P_04662 [Polaribacter irgensii 23-P]
Length = 178
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
M ++ + L +GKH F+Y +D +FFE + ++ +E + +F
Sbjct: 1 MKDLKQFDIPFVGLKEGKHVFEYHIDTTFFEIYNYREFGKASVKVTLEFVKKSTLFELNF 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYE 120
GTV CD + + + LVV+FG Y + ++++L++P ++ +YE
Sbjct: 61 TATGTVHVPCDLTNEYFDQEITATLPLVVKFGPEYNDENEEILILPHEVYQFSVAQFIYE 120
Query: 121 YSELAILMQRMHSDGECDPEMMNRMSDLLAIDADEATEESGMTAHDSRWDSLGKLLEQKE 180
L + +R+H D + E + L + E EE + D RWD L L+ +K+
Sbjct: 121 MIVLGVPSKRIHPDVILEDEETDETQHL---EGVEKEEEKTVEITDPRWDKLKNLITEKK 177
>gi|126645678|ref|ZP_01718222.1| hypothetical protein ALPR1_13570 [Algoriphagus sp. PR1]
gi|126579089|gb|EAZ83253.1| hypothetical protein ALPR1_13570 [Algoriphagus sp. PR1]
Length = 188
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 16 QGKHRFDYELDDSFFEQ-SGSYDILGGTLAAKVEVERNGDVFNFCIALDGTVKTACDRCL 74
+GKH D+E+ DSFF+ ++ + G + +V +++ ++ + G V CDR L
Sbjct: 16 EGKHEIDFEISDSFFQHFEDNHLVEKGNMTIRVMMKKGANLIELDFHIKGIVTLTCDRSL 75
Query: 75 DEVEIPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYEYSELAILMQRMHSD 134
+E + P++ ++ ++G +E+++D++++ +++++ L+YE+ L + +++H D
Sbjct: 76 EEYDQPLEFHESMLYKYGSEEKEINEDVIMITRDTPSINVAQLIYEFILLNLPSKKIHPD 135
Query: 135 --GECDPEMMNRMSDLLAIDADEATEESGM------TAHDSRWDSLGKL 175
E D E L+ ID + +E T D RW SL L
Sbjct: 136 YRNELDEEDYEGEGSLVYIDDQDFEDEELDEDSVESTDIDPRWASLKNL 184
>gi|110638028|ref|YP_678236.1| hypothetical protein CHU_1626 [Cytophaga hutchinsonii ATCC 33406]
gi|110280709|gb|ABG58895.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 189
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 6/162 (3%)
Query: 19 HRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCIALDGTVKTACDRCLDEVE 78
H+F+++L+DSFF I G++ VE E+ + L+G V+ CDR LD E
Sbjct: 22 HKFEFQLNDSFFTLFEDSLIQKGSVTVDVEFEKTPLLIRMNFILNGVVELVCDRSLDTFE 81
Query: 79 IPVKEENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYEYSELAILMQRMHSDGECD 138
P+ EN L+ ++ + E++++++ + ++++ +YE+ L + ++++H + +
Sbjct: 82 QPISSENVLLFKYSEEEGEITEEIIGIKRETIKINIAQYIYEFINLEVPIKKLHPRFQ-E 140
Query: 139 PEMMNRMSDLLAI-----DADEATEESGMTAHDSRWDSLGKL 175
E+ N S+ L I + +E +E D RW +L L
Sbjct: 141 EEVDNDTSETLLIYSTETENEEKSESPTEDLIDPRWLALKSL 182
>gi|171327458|ref|ZP_02915897.1| conserved hypothetical protein [Candidatus Amoebophilus asiaticus
5a2]
gi|171086151|gb|EDT32901.1| conserved hypothetical protein [Candidatus Amoebophilus asiaticus
5a2]
Length = 143
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 58/111 (52%)
Query: 23 YELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCIALDGTVKTACDRCLDEVEIPVK 82
Y+LDD+FF+ + G L +++++ ++ G ++ +CDR L+ P+
Sbjct: 23 YQLDDTFFKLFEGNLLETGKLNVNIKLDKTPRHIQLLFSIQGEIELSCDRTLEPFNYPIN 82
Query: 83 EENKLVVRFGDSYQELSDDLLVVPLSEGTLDLSSLLYEYSELAILMQRMHS 133
E + + GD +EL DL ++ ++ ++ +Y++ L+I M+R+H
Sbjct: 83 IERVVHFKIGDEDKELDMDLYMIERQASSIQVAQHIYDFVNLSIPMKRLHP 133
>gi|148927156|ref|ZP_01810782.1| protein of unknown function DUF177 [candidate division TM7
genomosp. GTL1]
gi|147887389|gb|EDK72837.1| protein of unknown function DUF177 [candidate division TM7
genomosp. GTL1]
Length = 182
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Query: 1 MASSGRYVLNLKSLPQGKHRFDYELDDSFFEQSGSYDILGGTLAAKVEVERNGDVFNFCI 60
MA + + L G H + YE+ D FFE D ++ +++
Sbjct: 1 MAHRREFEIAFVGLKPGIHEYTYEIKDKFFEAFQQQDFRNCRANVRLLLDKKTGFMLLRF 60
Query: 61 ALDGTVKTACDRCLDEVEIPVKEENKLVVRFGDSYQELSD-----DLLVVPLSEGTLDLS 115
+ G+++T CDRC + + + +E + V+ D + ++D D+ + + +D++
Sbjct: 61 EIGGSLETTCDRCNNNLPFELWDEFNITVKMVDEPELMNDQEDDPDVYYIGRGDSHVDVA 120
Query: 116 SLLYEYSELAILMQRMHS----DG-ECDPEMMNRMSDLLAIDADEA 156
+YE+ L+I MQ++ S DG C+P ++ + L D ++
Sbjct: 121 GWIYEFINLSIPMQKVCSYEKMDGPHCNPSALDMLKKLETKDPEKT 166
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: May 10, 2008 4:54 AM
Number of letters in database: 884,634,002
Number of sequences in database: 2,620,852
Database: /apps/blastdb/nr.01
Posted date: May 10, 2008 4:52 AM
Number of letters in database: 976,814,986
Number of sequences in database: 2,761,530
Database: /apps/blastdb/nr.02
Posted date: May 10, 2008 4:46 AM
Number of letters in database: 360,829,861
Number of sequences in database: 1,132,722
Lambda K H
0.316 0.134 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 784,338,026
Number of Sequences: 6515104
Number of extensions: 31248536
Number of successful extensions: 82363
Number of sequences better than 1.0e-04: 34
Number of HSP's better than 0.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 82313
Number of HSP's gapped (non-prelim): 34
length of query: 183
length of database: 2,222,278,849
effective HSP length: 125
effective length of query: 58
effective length of database: 1,407,890,849
effective search space: 81657669242
effective search space used: 81657669242
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 117 (49.7 bits)