BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SP_1862
(254 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15901690|ref|NP_346294.1| hypothetical protein SP_1862 [... 464 e-129
gi|15903721|ref|NP_359271.1| hypothetical protein spr1679 [... 463 e-129
gi|148989655|ref|ZP_01820987.1| hypothetical protein CGSSp6... 457 e-127
gi|148998726|ref|ZP_01826164.1| hypothetical protein CGSSp1... 457 e-127
gi|148984315|ref|ZP_01817610.1| hypothetical protein CGSSp3... 455 e-126
gi|148993320|ref|ZP_01822860.1| hypothetical protein CGSSp9... 454 e-126
gi|149002159|ref|ZP_01827113.1| hypothetical protein CGSSp1... 452 e-125
gi|125717818|ref|YP_001034951.1| hypothetical protein SSA_0... 421 e-116
gi|146319253|ref|YP_001198965.1| hypothetical protein SSU05... 315 2e-84
gi|81097373|ref|ZP_00875662.1| conserved hypothetical prote... 313 4e-84
gi|13507092|gb|AAK28437.1| unknown [Streptococcus gordonii] 253 8e-66
gi|149187608|ref|ZP_01865905.1| hypothetical protein VSAK1_... 194 5e-48
gi|149922780|ref|ZP_01911205.1| hypothetical protein PPSIR1... 194 6e-48
gi|118074006|ref|ZP_01542179.1| conserved hypothetical prot... 180 7e-44
gi|88855834|ref|ZP_01130497.1| hypothetical protein A20C1_0... 169 2e-40
gi|150381930|ref|ZP_01920905.1| protein of unknown function... 124 7e-27
gi|56708893|ref|YP_164936.1| hypothetical protein SPOA0106 ... 120 8e-26
gi|118755563|ref|ZP_01603351.1| protein of unknown function... 120 9e-26
gi|115359059|ref|YP_776197.1| protein of unknown function D... 115 2e-24
gi|54302408|ref|YP_132401.1| hypothetical protein PBPRB0729... 115 3e-24
gi|118073510|ref|ZP_01541690.1| protein of unknown function... 114 4e-24
gi|56695652|ref|YP_166003.1| hypothetical protein SPO0750 [... 113 1e-23
gi|90414352|ref|ZP_01222330.1| hypothetical protein P3TCK_0... 111 4e-23
gi|86136593|ref|ZP_01055172.1| hypothetical protein MED193_... 110 7e-23
gi|84386154|ref|ZP_00989183.1| hypothetical protein V12B01_... 109 1e-22
gi|71281549|ref|YP_271300.1| putative lipoprotein [Colwelli... 108 2e-22
gi|87119058|ref|ZP_01074956.1| putative lipoprotein [Marino... 107 5e-22
gi|150380368|ref|ZP_01919429.1| protein of unknown function... 107 7e-22
gi|67940747|ref|ZP_00533095.1| conserved hypothetical prote... 106 1e-21
gi|71281216|ref|YP_269737.1| hypothetical protein CPS_3038 ... 101 5e-20
gi|118074510|ref|ZP_01542674.1| protein of unknown function... 100 9e-20
gi|126734591|ref|ZP_01750337.1| hypothetical protein RCCS2_... 93 1e-17
gi|32033902|ref|ZP_00134173.1| COG4922: Uncharacterized pro... 88 4e-16
gi|152979751|ref|YP_001345380.1| protein of unknown functio... 88 5e-16
gi|150380200|ref|ZP_01919272.1| protein of unknown function... 85 3e-15
gi|37526250|ref|NP_929594.1| hypothetical protein plu2348 [... 83 2e-14
gi|126729404|ref|ZP_01745218.1| hypothetical protein SSE37_... 82 4e-14
gi|109897798|ref|YP_661053.1| protein of unknown function D... 80 9e-14
gi|126641136|ref|YP_001084120.1| hypothetical protein A1S_1... 78 6e-13
gi|86146212|ref|ZP_01064537.1| hypothetical protein MED222_... 77 7e-13
gi|84385561|ref|ZP_00988592.1| hypothetical protein V12B01_... 76 2e-12
gi|124876799|gb|EAY66789.1| conserved hypothetical protein ... 75 3e-12
gi|83942747|ref|ZP_00955208.1| hypothetical protein EE36_16... 75 4e-12
gi|118712385|ref|ZP_01564956.1| protein of unknown function... 74 6e-12
gi|91225763|ref|ZP_01260792.1| hypothetical protein V12G01_... 74 7e-12
gi|78061870|ref|YP_371778.1| hypothetical protein Bcep18194... 74 7e-12
gi|86132768|ref|ZP_01051360.1| hypothetical protein MED134_... 74 8e-12
gi|107025982|ref|YP_623493.1| protein of unknown function D... 74 8e-12
gi|88712014|ref|ZP_01106101.1| hypothetical protein FB2170_... 74 1e-11
gi|86134759|ref|ZP_01053341.1| hypothetical protein MED152_... 73 1e-11
gi|83953986|ref|ZP_00962707.1| hypothetical protein NAS141_... 73 1e-11
gi|89890740|ref|ZP_01202249.1| conserved hypothetical prote... 73 2e-11
gi|84352373|ref|ZP_00977337.1| COG4922: Uncharacterized pro... 73 2e-11
gi|15889288|ref|NP_354969.1| hypothetical protein AGR_C_363... 72 3e-11
gi|19704557|ref|NP_604119.1| hypothetical protein FN1222 [F... 72 3e-11
gi|84387136|ref|ZP_00990158.1| hypothetical protein V12B01_... 72 4e-11
gi|83857149|ref|ZP_00950677.1| hypothetical protein CA2559_... 72 4e-11
gi|17935885|ref|NP_532675.1| hypothetical protein Atu1998 [... 71 5e-11
gi|116186057|ref|ZP_01475957.1| hypothetical protein VEx2w_... 71 5e-11
gi|84683945|ref|ZP_01011847.1| hypothetical protein RB2654_... 69 2e-10
gi|33598870|ref|NP_886513.1| possible membrane protein [Bor... 69 2e-10
gi|126734590|ref|ZP_01750336.1| hypothetical protein RCCS2_... 69 3e-10
gi|33603947|ref|NP_891507.1| possible membrane protein [Bor... 69 3e-10
gi|78060922|ref|YP_370830.1| hypothetical protein Bcep18194... 67 8e-10
gi|115359644|ref|YP_776782.1| protein of unknown function D... 67 1e-09
gi|83952522|ref|ZP_00961253.1| hypothetical protein ISM_102... 66 2e-09
gi|107027573|ref|YP_625084.1| protein of unknown function D... 66 2e-09
gi|84353219|ref|ZP_00978155.1| COG4922: Uncharacterized pro... 66 2e-09
gi|118713206|ref|ZP_01565773.1| protein of unknown function... 66 2e-09
gi|118698433|ref|ZP_01556509.1| protein of unknown function... 64 1e-08
gi|75759306|ref|ZP_00739404.1| Hypothetical protein RBTH_06... 62 3e-08
gi|30019070|ref|NP_830701.1| hypothetical protein BC0915 [B... 62 5e-08
gi|154173883|ref|YP_001407365.1| putative pyruvate kinase [... 60 9e-08
gi|67078152|ref|YP_245772.1| possible pyruvate kinase [Baci... 60 2e-07
gi|114570970|ref|YP_757650.1| hypothetical protein Mmar10_2... 59 2e-07
gi|89204084|ref|ZP_01182663.1| conserved hypothetical prote... 59 2e-07
gi|110600684|ref|ZP_01388898.1| ester cyclase-like [Geobact... 59 2e-07
gi|120610635|ref|YP_970313.1| protein of unknown function D... 59 4e-07
gi|115424449|emb|CAJ51003.1| conserved hypothetical protein... 57 1e-06
gi|87198732|ref|YP_495989.1| hypothetical protein Saro_0708... 57 1e-06
gi|52426056|ref|YP_089193.1| hypothetical protein MS2001 [M... 56 3e-06
gi|87200894|ref|YP_498151.1| hypothetical protein Saro_2881... 54 6e-06
>gi|15901690|ref|NP_346294.1| hypothetical protein SP_1862 [Streptococcus pneumoniae TIGR4]
gi|111658204|ref|ZP_01408899.1| hypothetical protein SpneT_02000638 [Streptococcus pneumoniae
TIGR4]
gi|14973364|gb|AAK75934.1| hypothetical protein SP_1862 [Streptococcus pneumoniae TIGR4]
Length = 254
Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats.
Identities = 254/254 (100%), Positives = 254/254 (100%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE
Sbjct: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEND 120
RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEND
Sbjct: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEND 120
Query: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSA 180
QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSA
Sbjct: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSA 180
Query: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE 240
AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE
Sbjct: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE 240
Query: 241 VMPKVEDLTNRGKF 254
VMPKVEDLTNRGKF
Sbjct: 241 VMPKVEDLTNRGKF 254
>gi|15903721|ref|NP_359271.1| hypothetical protein spr1679 [Streptococcus pneumoniae R6]
gi|116516425|ref|YP_817094.1| hypothetical protein SPD_1644 [Streptococcus pneumoniae D39]
gi|149006483|ref|ZP_01830182.1| hypothetical protein CGSSp18BS74_01801 [Streptococcus pneumoniae
SP18-BS74]
gi|15459353|gb|AAL00482.1| Hypothetical protein [Streptococcus pneumoniae R6]
gi|116077001|gb|ABJ54721.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
gi|147761781|gb|EDK68744.1| hypothetical protein CGSSp18BS74_01801 [Streptococcus pneumoniae
SP18-BS74]
Length = 254
Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats.
Identities = 253/254 (99%), Positives = 254/254 (100%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE
Sbjct: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEND 120
RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEND
Sbjct: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEND 120
Query: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSA 180
QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNH+IGQGSA
Sbjct: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHEIGQGSA 180
Query: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE 240
AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE
Sbjct: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE 240
Query: 241 VMPKVEDLTNRGKF 254
VMPKVEDLTNRGKF
Sbjct: 241 VMPKVEDLTNRGKF 254
>gi|148989655|ref|ZP_01820987.1| hypothetical protein CGSSp6BS73_00400 [Streptococcus pneumoniae
SP6-BS73]
gi|149011273|ref|ZP_01832520.1| hypothetical protein CGSSp19BS75_07682 [Streptococcus pneumoniae
SP19-BS75]
gi|149024986|ref|ZP_01836366.1| hypothetical protein CGSSp23BS72_09958 [Streptococcus pneumoniae
SP23-BS72]
gi|147764263|gb|EDK71194.1| hypothetical protein CGSSp19BS75_07682 [Streptococcus pneumoniae
SP19-BS75]
gi|147924972|gb|EDK76054.1| hypothetical protein CGSSp6BS73_00400 [Streptococcus pneumoniae
SP6-BS73]
gi|147929479|gb|EDK80474.1| hypothetical protein CGSSp23BS72_09958 [Streptococcus pneumoniae
SP23-BS72]
Length = 254
Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats.
Identities = 252/254 (99%), Positives = 252/254 (99%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE
Sbjct: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEND 120
RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFR DENG IVEHWDVIDYYRTPEND
Sbjct: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFRADENGRIVEHWDVIDYYRTPEND 120
Query: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSA 180
QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSA
Sbjct: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSA 180
Query: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE 240
AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE
Sbjct: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE 240
Query: 241 VMPKVEDLTNRGKF 254
VMPKVEDLTNRGKF
Sbjct: 241 VMPKVEDLTNRGKF 254
>gi|148998726|ref|ZP_01826164.1| hypothetical protein CGSSp11BS70_11699 [Streptococcus pneumoniae
SP11-BS70]
gi|147755420|gb|EDK62469.1| hypothetical protein CGSSp11BS70_11699 [Streptococcus pneumoniae
SP11-BS70]
Length = 254
Score = 457 bits (1175), Expect = e-127, Method: Composition-based stats.
Identities = 251/254 (98%), Positives = 252/254 (99%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE
Sbjct: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEND 120
RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFR DENG IVEHWDV+DYYRTPEND
Sbjct: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFRADENGRIVEHWDVVDYYRTPEND 120
Query: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSA 180
QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSA
Sbjct: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSA 180
Query: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE 240
AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE
Sbjct: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE 240
Query: 241 VMPKVEDLTNRGKF 254
VMPKVEDLTNRGKF
Sbjct: 241 VMPKVEDLTNRGKF 254
>gi|148984315|ref|ZP_01817610.1| hypothetical protein CGSSp3BS71_03802 [Streptococcus pneumoniae
SP3-BS71]
gi|147923604|gb|EDK74717.1| hypothetical protein CGSSp3BS71_03802 [Streptococcus pneumoniae
SP3-BS71]
Length = 254
Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats.
Identities = 249/254 (98%), Positives = 252/254 (99%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE
Sbjct: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEND 120
RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFR DENG IVEHWDVIDYYRTPEND
Sbjct: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFRADENGRIVEHWDVIDYYRTPEND 120
Query: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSA 180
QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNH+IGQGSA
Sbjct: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHEIGQGSA 180
Query: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE 240
AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYA+YDIFRL+NGKIVEHWDNKE
Sbjct: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAKYDIFRLKNGKIVEHWDNKE 240
Query: 241 VMPKVEDLTNRGKF 254
VMPKVEDLTNRGKF
Sbjct: 241 VMPKVEDLTNRGKF 254
>gi|148993320|ref|ZP_01822860.1| hypothetical protein CGSSp9BS68_06977 [Streptococcus pneumoniae
SP9-BS68]
gi|147928087|gb|EDK79106.1| hypothetical protein CGSSp9BS68_06977 [Streptococcus pneumoniae
SP9-BS68]
Length = 254
Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats.
Identities = 250/254 (98%), Positives = 251/254 (98%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE
Sbjct: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEND 120
RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFR DENG IVEHWDVIDYYRTPEND
Sbjct: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFRADENGRIVEHWDVIDYYRTPEND 120
Query: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSA 180
QLDQIFGDFEIKDLDKKAENKKLVRRFLTE FQNGELEQWSDYVADDLIQHNH+IGQGSA
Sbjct: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTETFQNGELEQWSDYVADDLIQHNHEIGQGSA 180
Query: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE 240
AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE
Sbjct: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE 240
Query: 241 VMPKVEDLTNRGKF 254
VMPKVEDLTNRGKF
Sbjct: 241 VMPKVEDLTNRGKF 254
>gi|149002159|ref|ZP_01827113.1| hypothetical protein CGSSp14BS69_10621 [Streptococcus pneumoniae
SP14-BS69]
gi|147759968|gb|EDK66958.1| hypothetical protein CGSSp14BS69_10621 [Streptococcus pneumoniae
SP14-BS69]
Length = 254
Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 247/254 (97%), Positives = 251/254 (98%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
MSQQVKNAHNLYIHAIQDGRVAEAQ QSVGDTYIQHSTGVPDGKEGFAAFFADFFER+PE
Sbjct: 1 MSQQVKNAHNLYIHAIQDGRVAEAQTQSVGDTYIQHSTGVPDGKEGFAAFFADFFERYPE 60
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEND 120
RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFR DENG IVEHWDVIDYYRTPEND
Sbjct: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFRADENGRIVEHWDVIDYYRTPEND 120
Query: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSA 180
QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNH+IGQGSA
Sbjct: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHEIGQGSA 180
Query: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE 240
AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYA+YDIFRL+NGKIVEHWDNKE
Sbjct: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAKYDIFRLKNGKIVEHWDNKE 240
Query: 241 VMPKVEDLTNRGKF 254
VMPKVEDLTNRGKF
Sbjct: 241 VMPKVEDLTNRGKF 254
>gi|125717818|ref|YP_001034951.1| hypothetical protein SSA_0985 [Streptococcus sanguinis SK36]
gi|125497735|gb|ABN44401.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
Length = 254
Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats.
Identities = 229/254 (90%), Positives = 239/254 (94%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
MS+QV+NA NLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFA+FFERHPE
Sbjct: 1 MSKQVENAQNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFANFFERHPE 60
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEND 120
R++KIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFR DENG IVEHWDVIDYYR PEN
Sbjct: 61 REMKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFRSDENGRIVEHWDVIDYYRAPENG 120
Query: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSA 180
QLDQIFGDFEI DLDK NKK VRRFLTEIFQNGELEQW+DYVA+DLIQHNH+IGQGS
Sbjct: 121 QLDQIFGDFEITDLDKTVANKKTVRRFLTEIFQNGELEQWNDYVAEDLIQHNHEIGQGSQ 180
Query: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE 240
AYK+YVAE+ V FDFVFQLLGQGNYVVSYGQ QIDGVAYAQYDIFRLENG IVEHWDNKE
Sbjct: 181 AYKDYVAEHGVAFDFVFQLLGQGNYVVSYGQAQIDGVAYAQYDIFRLENGLIVEHWDNKE 240
Query: 241 VMPKVEDLTNRGKF 254
VMPKVEDLTNRGKF
Sbjct: 241 VMPKVEDLTNRGKF 254
>gi|146319253|ref|YP_001198965.1| hypothetical protein SSU05_1599 [Streptococcus suis 05ZYH33]
gi|146321456|ref|YP_001201167.1| hypothetical protein SSU98_1609 [Streptococcus suis 98HAH33]
gi|145690059|gb|ABP90565.1| Uncharacterized protein conserved in bacteria [Streptococcus suis
05ZYH33]
gi|145692262|gb|ABP92767.1| Uncharacterized protein conserved in bacteria [Streptococcus suis
98HAH33]
Length = 253
Score = 315 bits (806), Expect = 2e-84, Method: Composition-based stats.
Identities = 159/255 (62%), Positives = 197/255 (77%), Gaps = 3/255 (1%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
MS Q++NA NLY+ I+DG + E +G +Y QHSTGVPD KEGFAAFF DFF+R+P+
Sbjct: 1 MSNQLENAKNLYLRGIRDGEIKEVHENYMGASYTQHSTGVPDEKEGFAAFFEDFFKRNPK 60
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEN- 119
R+I IVR IEDGN VFVHVHQ LN G A+WVT D FR DENGCIVEHWDVID Y P+
Sbjct: 61 REINIVRAIEDGNFVFVHVHQKLNDGAAEWVTADIFRSDENGCIVEHWDVIDAY--PKTI 118
Query: 120 DQLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGS 179
Q D I+ DFE+ DLDK +NKK+VRRFL ++ QNG++E++ DYVA DLIQHN +I QG
Sbjct: 119 GQTDPIYADFELTDLDKTEDNKKIVRRFLVDVLQNGKIEKFDDYVAADLIQHNQEIAQGG 178
Query: 180 AAYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNK 239
AYK+Y+ E V +DFVF+++GQG+YVV+Y + I G YA +DI+RL++GKIVEHWDNK
Sbjct: 179 VAYKDYLVESQVNYDFVFKVMGQGDYVVAYSKVWIAGQDYAHFDIYRLKDGKIVEHWDNK 238
Query: 240 EVMPKVEDLTNRGKF 254
EVMP +DLTN GKF
Sbjct: 239 EVMPDKKDLTNLGKF 253
>gi|81097373|ref|ZP_00875662.1| conserved hypothetical protein [Streptococcus suis 89/1591]
gi|80976579|gb|EAP40173.1| conserved hypothetical protein [Streptococcus suis 89/1591]
Length = 253
Score = 313 bits (803), Expect = 4e-84, Method: Composition-based stats.
Identities = 160/255 (62%), Positives = 201/255 (78%), Gaps = 3/255 (1%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
MS Q++NA NLY+ I+DG + E +G +Y QHSTGVPD KEGFAAFF DFF+R+P+
Sbjct: 1 MSNQLENAKNLYLRGIRDGEIKEVHENYMGASYTQHSTGVPDEKEGFAAFFEDFFKRNPK 60
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEN- 119
R+I IVR IEDGN VFVHVHQ LN GEA+WVT D FR DENG IVEHWDVID Y P+
Sbjct: 61 REINIVRAIEDGNFVFVHVHQKLNDGEAEWVTADIFRSDENGRIVEHWDVIDAY--PKTI 118
Query: 120 DQLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGS 179
DQ D I+ DFE+ DLDK +NKK+VRRFL ++FQNGE++++ DYVA +LIQHN +I QG
Sbjct: 119 DQTDPIYADFELTDLDKTEDNKKIVRRFLVDVFQNGEIDKFDDYVAANLIQHNQEIAQGG 178
Query: 180 AAYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNK 239
AAYK+Y+ + +V +DFVF+++GQG+YVV+Y + I G YA +DI+RL++GKIVEHWDNK
Sbjct: 179 AAYKDYLVDKAVNYDFVFKVMGQGDYVVAYSKVWIAGQDYAHFDIYRLKDGKIVEHWDNK 238
Query: 240 EVMPKVEDLTNRGKF 254
EVMP +DLTN GKF
Sbjct: 239 EVMPDKKDLTNLGKF 253
>gi|13507092|gb|AAK28437.1| unknown [Streptococcus gordonii]
Length = 156
Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats.
Identities = 140/155 (90%), Positives = 145/155 (93%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
MS+QV+NA NLYIHAIQDG VAEAQAQSVGDTYIQHSTGVPDGKEGF AFFA+FFERHPE
Sbjct: 1 MSKQVENAQNLYIHAIQDGSVAEAQAQSVGDTYIQHSTGVPDGKEGFEAFFANFFERHPE 60
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEND 120
R++KIVRTIED NLVFVHVHQYLNGGEAQWVTTDTFR DENG IVEHWDVIDYYR PEN
Sbjct: 61 REMKIVRTIEDSNLVFVHVHQYLNGGEAQWVTTDTFRSDENGRIVEHWDVIDYYRAPENG 120
Query: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNG 155
QLDQIFGDFEIKDLDK AENKKLVRRFLTEIFQ G
Sbjct: 121 QLDQIFGDFEIKDLDKTAENKKLVRRFLTEIFQMG 155
>gi|149187608|ref|ZP_01865905.1| hypothetical protein VSAK1_22849 [Vibrio shilonii AK1]
gi|148838488|gb|EDL55428.1| hypothetical protein VSAK1_22849 [Vibrio shilonii AK1]
Length = 248
Score = 194 bits (492), Expect = 5e-48, Method: Composition-based stats.
Identities = 109/254 (42%), Positives = 157/254 (61%), Gaps = 6/254 (2%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
MS++++NA NLY+ I+DG V EA + G Y QHSTGV +G EGF FF F ER
Sbjct: 1 MSKKLENATNLYMEGIRDGHVREAVTKYTGIRYTQHSTGVRNGIEGFVEFFEPFIERCRV 60
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEND 120
R I+I+R++ +G VFV +Q +N GEA W+TTD F D++ IVEHWDVI Y+ +D
Sbjct: 61 RDIQIIRSVVEGQYVFVQAYQDINNGEAYWLTTDLFDTDQHDKIVEHWDVISAYQNNPDD 120
Query: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSA 180
QLDQI G EI DL+ NK+LVRRFL ++ G+ E +Y+ D DI ++
Sbjct: 121 QLDQISGPTEITDLEHTESNKELVRRFLCDVMVLGQTESIDNYITFD------DIPIHAS 174
Query: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE 240
+ + ++ ++ VF+++GQG+ VV+Y + YA+++IFR+ N KIVE W N+E
Sbjct: 175 SNVVHPSKLIGAYNQVFKIIGQGDTVVAYSRVIHQKQEYARFEIFRVSNAKIVEIWINEE 234
Query: 241 VMPKVEDLTNRGKF 254
+P + N GKF
Sbjct: 235 PIPPKHEWVNGGKF 248
>gi|149922780|ref|ZP_01911205.1| hypothetical protein PPSIR1_08302 [Plesiocystis pacifica SIR-1]
gi|149816400|gb|EDM75901.1| hypothetical protein PPSIR1_08302 [Plesiocystis pacifica SIR-1]
Length = 263
Score = 194 bits (492), Expect = 6e-48, Method: Composition-based stats.
Identities = 109/255 (42%), Positives = 156/255 (61%), Gaps = 4/255 (1%)
Query: 4 QVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQI 63
+++NA LY+ I+DG+ EA + G Y QHSTGV DGKEGF FF F R+PER I
Sbjct: 9 RLRNAIGLYMEGIRDGKAREAIEKFTGARYTQHSTGVRDGKEGFIEFFEPFLARNPERDI 68
Query: 64 KIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPENDQLD 123
+++R +D FVHV+Q LNGGEAQWVT D F D + I+EHWDVI Y
Sbjct: 69 QVIRGWQDERYAFVHVYQSLNGGEAQWVTADFFDFDADDKIIEHWDVIAAYCPATPSGHT 128
Query: 124 QIFGDFEIKDLDKKAENKKLVRRFLTEIF-QNGELEQWSDYVA-DDLIQHNHDIGQGSAA 181
I G EI+DL+ NK LVR + ++ + G++ + Y++ D IQHN ++G G A
Sbjct: 129 SIDGATEIRDLEHTEANKALVREMIEQLLMRGGDVSKADQYISRDTYIQHNAEVGDGLEA 188
Query: 182 YKNYV--AEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNK 239
++ + + + ++ V L+G+GN+V + + + +G YAQ D+FR+E G+IVEHWDN
Sbjct: 189 FEALLNQPDRPLWYERVVLLVGRGNFVATLCEARWEGEPYAQADVFRVEGGRIVEHWDNV 248
Query: 240 EVMPKVEDLTNRGKF 254
E P ++L N GKF
Sbjct: 249 EPCPPEDELANGGKF 263
>gi|118074006|ref|ZP_01542179.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
gi|118021579|gb|EAV35410.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
Length = 239
Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats.
Identities = 100/237 (42%), Positives = 142/237 (59%), Gaps = 5/237 (2%)
Query: 23 EAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQY 82
EA + G+ Y QHSTGV DGKEGF FFA F ER+P+R I++VR IEDG VFVHV+Q
Sbjct: 3 EALDKYTGERYTQHSTGVGDGKEGFMEFFAPFLERNPKRDIQVVRAIEDGQYVFVHVYQS 62
Query: 83 LNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPENDQLDQIFGDFEIKDLDKKAENKK 142
LN GEA+WVT D F D+N ++EHWDVI + + G E++DLDK ENK
Sbjct: 63 LNDGEAKWVTADLFDTDDNDRMIEHWDVIAAFEEKTLSGRTMVDGPTEVEDLDKTDENKT 122
Query: 143 LVRRFLTEIFQNGELEQWSDYVADDLI-QHNHDIGQGSAA----YKNYVAEYSVTFDFVF 197
+V+ F ++ + ++ + Y++ QHN +G G ++ E + + +
Sbjct: 123 IVQAFFDDVLLGRKFDKATKYISSKQYDQHNPKVGDGLVGVIKHFETKKCEKNSRYVKLH 182
Query: 198 QLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKEVMPKVEDLTNRGKF 254
L+GQGN+VV++ T + G +A +DIFRL++ IVEHWD +E + E N GKF
Sbjct: 183 HLIGQGNFVVTFSHTLVSGEDWAFFDIFRLKDSMIVEHWDVQEKILSPEQWNNSGKF 239
>gi|88855834|ref|ZP_01130497.1| hypothetical protein A20C1_07036 [marine actinobacterium PHSC20C1]
gi|88815158|gb|EAR25017.1| hypothetical protein A20C1_07036 [marine actinobacterium PHSC20C1]
Length = 254
Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 99/254 (38%), Positives = 144/254 (56%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
M Q++ NA ++Y+ I+DG EA VG Y QHST V DGK+GF FF DF +R+P
Sbjct: 1 MGQRLDNATSIYLEGIRDGNYVEAINAYVGQRYTQHSTPVRDGKDGFIEFFDDFTKRNPV 60
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEND 120
R I+I+R EDG+ VFV Q LN GE ++VT D F D++ ++EHWD+I +
Sbjct: 61 RDIEIIRGFEDGHFVFVQATQSLNNGEFRYVTADIFDTDDDAKLIEHWDMIAELGSTGIS 120
Query: 121 QLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSA 180
+ G E+ DLDK NK+LV F+T + G +DY+A DL QH+ I G
Sbjct: 121 GRSETDGPTEVTDLDKTEINKRLVSEFVTNVLIGGNEAHAADYLAADLAQHDARIADGRD 180
Query: 181 AYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE 240
AY + +++ + + +G GN+V ++++G A A D++R++NG IVEHW E
Sbjct: 181 AYLEFARSHALRYTELHNTIGSGNFVAVLAASELEGRAIASIDLYRVDNGIIVEHWAVAE 240
Query: 241 VMPKVEDLTNRGKF 254
+ N GKF
Sbjct: 241 EITDQATWVNEGKF 254
>gi|150381930|ref|ZP_01920905.1| protein of unknown function DUF1486 [Shewanella sediminis HAW-EB3]
gi|150252997|gb|EDM90712.1| protein of unknown function DUF1486 [Shewanella sediminis HAW-EB3]
Length = 287
Score = 124 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 85/230 (36%), Positives = 119/230 (51%), Gaps = 14/230 (6%)
Query: 33 YIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVT 92
Y QH+ V DG GF A E ++ +VR EDG VF H G + +
Sbjct: 61 YTQHNLSVGDGLAGFGAVLQALPE--GSARVDVVRAFEDGEFVFTHTDYNFFGPK---IG 115
Query: 93 TDTFREDENGCIVEHWD-VIDYYRTPENDQLDQIFGDFEIKDLDKKAENKKLVRRFLTEI 151
D FR E+G IVEHWD +I P QI G + DLDK AENK LV F+ I
Sbjct: 116 FDLFRF-EDGVIVEHWDNLIATSDLPNPSGHSQIDGSTTVTDLDKTAENKALVTDFVDTI 174
Query: 152 FQNGELEQWSDYV-ADDLIQHNHDIGQGSA---AYKNYVAEYSVTFDFV--FQLLGQGNY 205
GE ++ ++Y D+ +QHN IG G + A +A+ + + +++LG+GN+
Sbjct: 175 LVKGEFDKLANYFDGDNYLQHNPQIGDGVSGLGAALEAMAQQGIEMIYTKNYKVLGEGNF 234
Query: 206 VVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE-VMPKVEDLTNRGKF 254
V+S + + G + YD+FR+ENGK+ EHWD E + P E N GKF
Sbjct: 235 VLSISEGTLGGAETSFYDLFRIENGKVAEHWDVIETIAPISEWKNNNGKF 284
>gi|56708893|ref|YP_164936.1| hypothetical protein SPOA0106 [Silicibacter pomeroyi DSS-3]
gi|56680578|gb|AAV97243.1| conserved hypothetical protein [Silicibacter pomeroyi DSS-3]
Length = 277
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 75/220 (34%), Positives = 113/220 (51%), Gaps = 9/220 (4%)
Query: 29 VGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEA 88
V + YIQH+ DG+EG F + P + VR I D N V +H G +
Sbjct: 52 VAEGYIQHNPQAADGREGLLGFVSFLETLDPPVTVNPVRVIADDNFVVIHQEAEFFGPK- 110
Query: 89 QWVTTDTFREDENGCIVEHWDVIDYYRTPENDQLDQIFGDFEIKDLDKKAENKKLVRRFL 148
V D FR E+G I EHWD I T G +I DLDK AENK LV +
Sbjct: 111 --VIIDVFRF-EDGKIAEHWDSIQETVTETASGRSMTDGTTKITDLDKTAENKALVTGLV 167
Query: 149 TEIFQNGELEQWSDYVADDLIQHN---HDIGQGSAAYKNYVAEYSVTFDF--VFQLLGQG 203
++ G++++ DY+A+ +QHN D +G + Y+ E +++F + + ++ +G
Sbjct: 168 KDVLMGGKIDRIDDYIAEGYMQHNPFVPDTREGLKGFVAYLGENNISFWYSELHLVVAEG 227
Query: 204 NYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKEVMP 243
N+V + + DG A YDI+R+E+G IVEHWD + +P
Sbjct: 228 NFVFTQAEGVYDGTPTAFYDIWRIEDGMIVEHWDTVQPIP 267
>gi|118755563|ref|ZP_01603351.1| protein of unknown function DUF1486 [Shewanella pealeana ATCC
700345]
gi|118692827|gb|EAV99055.1| protein of unknown function DUF1486 [Shewanella pealeana ATCC
700345]
Length = 288
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 84/231 (36%), Positives = 115/231 (49%), Gaps = 15/231 (6%)
Query: 33 YIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVT 92
Y QH+ V DG GF E + +K R I+D N V +H G + V
Sbjct: 62 YTQHNLAVGDGLAGFGEVLQALPEGSAKAGVK--RAIQDDNYVVLHTEYNFFGPK---VG 116
Query: 93 TDTFREDENGCIVEHWDVIDYYRTPENDQLDQIFGDFEIKDLDKKAENKKLVRRFLTEIF 152
D FR E+G IVEHWD + Q+ G I DLDK AENK +V F+ I
Sbjct: 117 FDVFRF-EDGKIVEHWDNLQVIAPVNPSGHTQLDGSTAITDLDKTAENKAIVADFVNTIL 175
Query: 153 QNGELEQWSDYVADD---LIQHNHDIGQGSAAYKNYVAEY-----SVTFDFVFQLLGQGN 204
NG++ Q + ++ ++ IQHN IG G + + E ++ +D ++LG+GN
Sbjct: 176 MNGDMSQINKFIDNEDSAYIQHNPGIGDGLSGLGKALEELANAGLTMKYDTNHKILGEGN 235
Query: 205 YVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKEVMPKVEDLTN-RGKF 254
+VVS + A YD+FRLENGKIVEHWD E +P + N GKF
Sbjct: 236 FVVSISEGIFANEHVAFYDLFRLENGKIVEHWDTIETIPAQSEWKNTNGKF 286
>gi|115359059|ref|YP_776197.1| protein of unknown function DUF1486 [Burkholderia cepacia AMMD]
gi|115284347|gb|ABI89863.1| protein of unknown function DUF1486 [Burkholderia cepacia AMMD]
Length = 255
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 91/264 (34%), Positives = 126/264 (47%), Gaps = 19/264 (7%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
MS +K + +I+ G A A + YIQH+ V DG GF A P+
Sbjct: 1 MSSDLKAQVVALLKSIETGESAPAAVINPA-KYIQHNLAVGDGLAGFGAVLQAL----PK 55
Query: 61 RQIKI--VRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYY-RTP 117
K+ +R DG+ VF H G + + D FR ENG IVEHWD + TP
Sbjct: 56 GSAKVNTIRVFRDGDFVFTHTDYNFFGPK---IGFDIFRF-ENGQIVEHWDNLQQTPNTP 111
Query: 118 ENDQLDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYV-ADDLIQHNHDI- 175
I G +DL K NK LV F+ +I NG +E+ +DY D+ QHN I
Sbjct: 112 NPSGRTMIDGPTVPEDLVKTEVNKNLVAAFVDDILVNGRMERLADYFDGDNYHQHNPQIA 171
Query: 176 ----GQGSAAYKNYVAEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGK 231
G G A + + ++ + V ++LG+GN+V+ + + G A YD+FR+ NGK
Sbjct: 172 DGLSGLGDALHVMAMKGITMKYQKVHKVLGEGNFVLVASEGEFAGKPSAFYDLFRVANGK 231
Query: 232 IVEHWDNKEVMPKVEDLTN-RGKF 254
I EHWD E +P D N GKF
Sbjct: 232 IAEHWDTIEAIPPQADWKNTNGKF 255
>gi|54302408|ref|YP_132401.1| hypothetical protein PBPRB0729 [Photobacterium profundum SS9]
gi|46915830|emb|CAG22601.1| hypothetical protein [Photobacterium profundum SS9]
Length = 258
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 83/233 (35%), Positives = 112/233 (48%), Gaps = 15/233 (6%)
Query: 31 DTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQW 90
D YIQH+ V DG GF A E + +K R DG+ VF H G +
Sbjct: 30 DKYIQHNLAVGDGLAGFGAVLQALPEGSAKVNVK--RAFTDGDYVFTHTDYNFFGPK--- 84
Query: 91 VTTDTFREDENGCIVEHWDVIDYYRTPENDQLDQIFGDFEIKDLDKKAENKKLVRRFLTE 150
V D FR E+G IVEHWD + P Q+ G E+ DLDK ENK LV F+
Sbjct: 85 VGFDVFRF-EDGLIVEHWDNLAENTGPNPSNRTQLDGPTEVSDLDKTKENKALVTDFVDT 143
Query: 151 IFQNGELEQWSDYVAD---DLIQHNHDIGQGSAAYKNYVAEYS-----VTFDFVFQLLGQ 202
I G+ Q ++ D D +QHN I G + E + + + +LG+
Sbjct: 144 ILMKGDFAQLGRFIDDGDADYLQHNTAIADGVTGLGKALDEMAKQGIKMVYTENHIVLGE 203
Query: 203 GNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKEVMP-KVEDLTNRGKF 254
GN+V+S + + G + YD+FR++N KIVEHWD E +P K N GKF
Sbjct: 204 GNFVLSISEGSLGGEHVSFYDLFRIKNNKIVEHWDTIESIPAKNAWKNNNGKF 256
>gi|118073510|ref|ZP_01541690.1| protein of unknown function DUF1486 [Shewanella woodyi ATCC 51908]
gi|118022060|gb|EAV35884.1| protein of unknown function DUF1486 [Shewanella woodyi ATCC 51908]
Length = 254
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 78/229 (34%), Positives = 120/229 (52%), Gaps = 13/229 (5%)
Query: 33 YIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVT 92
YIQH+ +G EG AA F + P ++ IVR D + VF H + +Q V
Sbjct: 32 YIQHNPQTHEGDEGLAALFKRLSKTSP--RVNIVRIFADADFVFAHTEYDFS---SQRVG 86
Query: 93 TDTFREDENGCIVEHWDVIDYYRTPENDQLDQIFGDFEIKDLDKKAENKKLVRRFLTEIF 152
+ FR E VEHWD I + P + + G E+ DLDK N++LV+ F+ E+
Sbjct: 87 FEMFRF-EGDQTVEHWDNIQSRQGPNSAGHSMVDGIAEVSDLDKTESNRELVQSFVNEVL 145
Query: 153 QNGELEQWSDYV-ADDLIQHNHDIGQGSAAY-----KNYVAEYSVTFDFVFQLLGQGNYV 206
+ +L + S Y+ D I+HN + S+ + + +S+ +D ++L +GN+V
Sbjct: 146 ISRQLNKLSHYIDIDHYIEHNPKLSSLSSVHVALSESDIDDRFSIQYDKSHRILAEGNFV 205
Query: 207 VSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKEVM-PKVEDLTNRGKF 254
+S + G + YD+FRLE+GKI+EHWD +E + PK E N GKF
Sbjct: 206 LSACEGYYQGQHSSFYDLFRLESGKIIEHWDTRETIHPKSEWKNNNGKF 254
>gi|56695652|ref|YP_166003.1| hypothetical protein SPO0750 [Silicibacter pomeroyi DSS-3]
gi|56677389|gb|AAV94055.1| conserved hypothetical protein [Silicibacter pomeroyi DSS-3]
Length = 252
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 118/230 (51%), Gaps = 12/230 (5%)
Query: 31 DTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQW 90
+ YIQH +G EG A FA + +P +++ VR EDG+ F H ++Y +
Sbjct: 29 EKYIQHYPQTHEGSEGLAVLFARLAKTNP--RVRFVRVFEDGDFAFAH-NEY--DFASLR 83
Query: 91 VTTDTFREDENGCIVEHWDVIDYYRTPENDQLDQIFGDFEIKDLDKKAENKKLVRRFLTE 150
V + FR ENG VEHWD I P + G +I DL++ N+ LVR F
Sbjct: 84 VAFEVFRF-ENGRAVEHWDNIQPMLGPNPSGRGMLDGVTQITDLERTEANRALVRDFAQR 142
Query: 151 IFQNGELEQWSDYVADDLIQHNHDIGQGSAAYKNYVAEYS-----VTFDFVFQLLGQGNY 205
+ +L+ V D LIQH+ +I G AAY+ + + + + + ++L +GN+
Sbjct: 143 VLVGRQLDFLGSCVDDGLIQHDPEIADGRAAYRAALEAVTNGQPRLHYTRLHRVLAEGNF 202
Query: 206 VVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE-VMPKVEDLTNRGKF 254
V+ + + DGV + YD+FR+EN I+EHW+ E + P+ E GKF
Sbjct: 203 VLCMCEGERDGVHSSFYDLFRVENDTIIEHWNTIEAIAPRNEWKNENGKF 252
>gi|90414352|ref|ZP_01222330.1| hypothetical protein P3TCK_07174 [Photobacterium profundum 3TCK]
gi|90324576|gb|EAS41128.1| hypothetical protein P3TCK_07174 [Photobacterium profundum 3TCK]
Length = 287
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 82/233 (35%), Positives = 110/233 (47%), Gaps = 15/233 (6%)
Query: 31 DTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQW 90
D YIQH+ V DG GF A E + +K R DG+ VF H G +
Sbjct: 59 DKYIQHNLVVGDGLAGFGAVLQALPEGSAKVNVK--RAFTDGDYVFTHTDYNFFGPK--- 113
Query: 91 VTTDTFREDENGCIVEHWDVIDYYRTPENDQLDQIFGDFEIKDLDKKAENKKLVRRFLTE 150
V D FR E+G IVEHWD + Q+ G E+ DLDK ENK LV F+
Sbjct: 114 VGFDVFRF-EDGLIVEHWDNLAEKVGMNPSNRTQLDGPIEVSDLDKTKENKILVADFVDT 172
Query: 151 IFQNGELEQWSDYVAD---DLIQHNHDIGQGSAAYKNYVAEYS-----VTFDFVFQLLGQ 202
I G+ ++ D D +QHN I G + + E + + +LG+
Sbjct: 173 ILMKGDFAHLGHFIDDGDADYLQHNTAIADGVSGLGKALDEMEKQGIKMVYTENHIVLGE 232
Query: 203 GNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKEVMP-KVEDLTNRGKF 254
GN+V+S + + G + YD+FR+EN KIVEHWD E +P K N GKF
Sbjct: 233 GNFVLSISEGSLGGEHVSFYDLFRIENNKIVEHWDTIESIPAKSAWKNNNGKF 285
>gi|86136593|ref|ZP_01055172.1| hypothetical protein MED193_20759 [Roseobacter sp. MED193]
gi|85827467|gb|EAQ47663.1| hypothetical protein MED193_20759 [Roseobacter sp. MED193]
Length = 249
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 77/225 (34%), Positives = 115/225 (51%), Gaps = 9/225 (4%)
Query: 33 YIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVT 92
YIQH+ +G EG A+ FA + P ++ VR EDG+ F H ++Y + V
Sbjct: 31 YIQHNPQTHEGSEGIASLFARLSKTDP--KVTFVRVFEDGDFAFAH-NEY--DFASLRVA 85
Query: 93 TDTFREDENGCIVEHWDVIDYYRTPENDQLDQIFGDFEIKDLDKKAENKKLVRRFLTEIF 152
+ FR ENG VEHWD I + P + G EI DL+K EN+ L R F+ +
Sbjct: 86 FEVFRF-ENGQAVEHWDNIQPNQPPNLSGRGMLDGSTEITDLEKTEENRALARGFVQTVC 144
Query: 153 QNGELEQWSDYVADDLIQHNHDIGQGSAAYKNYVAEY--SVTFDFVFQLLGQGNYVVSYG 210
+ + +DYV L+QH+ IG G AA + + ++ + V ++L +GN+V+
Sbjct: 145 IERQFHRIADYVHPKLLQHHPKIGDGVAALSAALQDVGQALRYSQVHRVLAEGNFVLCVS 204
Query: 211 QTQIDGVAYAQYDIFRLENGKIVEHWDNKE-VMPKVEDLTNRGKF 254
+ V + YD+FRL G IVE W+ E V P+ E + GKF
Sbjct: 205 EGWQGDVHSSFYDLFRLSEGTIVEQWNTTETVPPRAEWKNDNGKF 249
>gi|84386154|ref|ZP_00989183.1| hypothetical protein V12B01_18211 [Vibrio splendidus 12B01]
gi|84378924|gb|EAP95778.1| hypothetical protein V12B01_18211 [Vibrio splendidus 12B01]
Length = 284
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 82/259 (31%), Positives = 126/259 (48%), Gaps = 25/259 (9%)
Query: 15 AIQDGRVAEAQAQSVGDT----------YIQHSTGVPDGKEGFAAFFADFFERHPERQIK 64
+IQ+ VA + GD YIQH+ V DG GF E + Q+
Sbjct: 30 SIQEKAVAVISSIETGDAKAVSYINPEKYIQHNLAVGDGLAGFGEVLQMLPEGSAKAQV- 88
Query: 65 IVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPENDQLDQ 124
R+ +DG+ V H G + V D FR E+G IVEHWD + P Q
Sbjct: 89 -TRSFQDGDYVVAHTEYNFFGPK---VGFDVFRF-EDGQIVEHWDNLQEIAKPNASGRTQ 143
Query: 125 IFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADD---LIQHNHDIGQGSAA 181
+ G ++ DLD+ +NK+LV F+ +I G++ + ++Y+ ++ +QHN + G +
Sbjct: 144 LDGATKVVDLDQTDKNKQLVSGFVKDILIGGDMAKINNYIDNEDSAYLQHNPGVADGLSG 203
Query: 182 YKNYV-----AEYSVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHW 236
+ A + + ++LGQGN+V+S + Q A YD+FR++NGKIVEHW
Sbjct: 204 LGEALGALAEAGMPMVYTANHKVLGQGNFVLSISEGQFMNNHVAFYDLFRVDNGKIVEHW 263
Query: 237 DNKEVMPKVEDLTN-RGKF 254
D E +P + N GKF
Sbjct: 264 DTIETIPARSEWKNDNGKF 282
>gi|71281549|ref|YP_271300.1| putative lipoprotein [Colwellia psychrerythraea 34H]
gi|71147289|gb|AAZ27762.1| putative lipoprotein [Colwellia psychrerythraea 34H]
Length = 287
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 82/233 (35%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 33 YIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVT 92
Y QH+ V DG GF A + ++ + R+ DG VF H G + +
Sbjct: 61 YTQHNLAVGDGLAGFGAVLQALPKN--SAKVNVARSFTDGEYVFTHNDYNFFGPK---IG 115
Query: 93 TDTFREDENGCIVEHWDVID-YYRTPENDQLDQIFGDFEIKDLDKKAENKKLVRRFLTEI 151
D FR E+G IVEHWD +D TP QI G + DLDK ENK LV F+ I
Sbjct: 116 FDLFRF-EDGLIVEHWDNLDDKSATPNPSGRSQIDGPTTVDDLDKTDENKTLVANFVDSI 174
Query: 152 FQNGELEQWSDYVADDLI-QHNHDIGQG--------SAAYKNYVAEYSVTFDFVFQLLGQ 202
G+ +Q S + D QHN I G A KN + + + ++LG+
Sbjct: 175 LVKGQFDQLSAFFEGDFYHQHNTVIADGLSGLGQALEAMAKNGI---KMVYTKNHKILGE 231
Query: 203 GNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE-VMPKVEDLTNRGKF 254
GN+V+S + + YD+FR+ENGKIVEHWD E ++PK GKF
Sbjct: 232 GNFVLSISEGSFADKPTSFYDLFRVENGKIVEHWDVMETIIPKERWKNTNGKF 284
>gi|87119058|ref|ZP_01074956.1| putative lipoprotein [Marinomonas sp. MED121]
gi|86165449|gb|EAQ66716.1| putative lipoprotein [Marinomonas sp. MED121]
Length = 283
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 81/234 (34%), Positives = 116/234 (49%), Gaps = 18/234 (7%)
Query: 31 DTYIQHSTGVPDGKEGFAAFFADFFERHPERQIK--IVRTIEDGNLVFVHVHQYLNGGEA 88
D Y+QH+ DG EG +F + P+ +K +VR DG+ VF H +L E
Sbjct: 58 DKYVQHNLMAADGVEGLKSFLSIL----PKSGVKAEVVRAYSDGDYVFTHTVYHLFEPE- 112
Query: 89 QWVTTDTFREDENGCIVEHWDVIDYYRT-PENDQLDQIFGDFEIKDLDKKAENKKLVRRF 147
V D FR +E G +VEHWD + T P Q+ G + DLDK NK LV F
Sbjct: 113 --VGFDIFRFEE-GKMVEHWDNLQAKATSPNPSGRTQLDGATKAVDLDKTEANKALVADF 169
Query: 148 LTEIFQNGELEQWSDYVADDL-IQHNHDIGQGSAAYKNYVAEY-SVTFDFVFQ----LLG 201
+ I GE ++ ++ D +QHN + G + +A S + V+ +LG
Sbjct: 170 VETILMKGEFDKVGNFFEGDYYLQHNTQVADGLSGLSKALAYMASQGIEMVYNKNHLVLG 229
Query: 202 QGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE-VMPKVEDLTNRGKF 254
QGN+V+S + G + YD+FR+EN KIVEHWD E ++P + GKF
Sbjct: 230 QGNFVLSVSEGTFAGKETSFYDLFRVENDKIVEHWDVIETILPNAKRQNANGKF 283
>gi|150380368|ref|ZP_01919429.1| protein of unknown function DUF1486 [Shewanella sediminis HAW-EB3]
gi|150254423|gb|EDM92124.1| protein of unknown function DUF1486 [Shewanella sediminis HAW-EB3]
Length = 288
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 109/233 (46%), Gaps = 15/233 (6%)
Query: 31 DTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQW 90
D Y QH+ V DG GF A + + IK R +DG+ VF H G +
Sbjct: 60 DKYTQHNLAVADGLAGFGALLQALPKGSAKVDIK--RAFQDGDYVFTHTDYNFFGPK--- 114
Query: 91 VTTDTFREDENGCIVEHWDVIDYYRTPENDQLDQIFGDFEIKDLDKKAENKKLVRRFLTE 150
V D FR E+G IVEHWD + P QI G + D DK +NK LV F+
Sbjct: 115 VGFDLFRF-EDGLIVEHWDNLAEKAAPNPSGRTQIDGPTTVIDSDKTEQNKALVADFVDT 173
Query: 151 IFQNGELEQWSDYVAD---DLIQHNHDIGQGSAAYKNYVAEYS-----VTFDFVFQLLGQ 202
I NG+ Q ++ + +QHN I G + E + + + +LG+
Sbjct: 174 ILVNGDFAQLGRFIDKGDANYLQHNTGIADGLNGLGKALEEMAKQGIKMVYTKNHIVLGE 233
Query: 203 GNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKEVMPKVEDL-TNRGKF 254
GN+V+S + G + YD+FR+EN K+VEHWD E +P + N GKF
Sbjct: 234 GNFVLSISEGSFGGEHVSFYDLFRVENDKLVEHWDIIEPIPTKDRWKNNNGKF 286
>gi|67940747|ref|ZP_00533095.1| conserved hypothetical protein [Chlorobium phaeobacteroides BS1]
gi|67913044|gb|EAM62544.1| conserved hypothetical protein [Chlorobium phaeobacteroides BS1]
Length = 299
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 82/231 (35%), Positives = 113/231 (48%), Gaps = 17/231 (7%)
Query: 33 YIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVT 92
YIQH+ GV DG GF A + + VR DGN V H G + +
Sbjct: 75 YIQHNQGVADGLAGFGAVLQQLPK--GSARANTVRVFSDGNYVVAHTDYNFFGPK---IG 129
Query: 93 TDTFREDENGCIVEHWDVIDYYRTPENDQLDQIFGDFEIKDLDKKAENKKLVRRFLTEIF 152
D FR E G IVEHWD + QI G EI DLD+ NK LV+ L ++F
Sbjct: 130 FDIFRF-EGGLIVEHWDNLQEKVAETASGRTQIDGPTEITDLDETEANKALVKNLLNDVF 188
Query: 153 QNGELEQWSDYVA-DDLIQHNHDI-----GQGSAAYKNYVAEYSVTFDFVFQLLGQGNYV 206
+ ++Y++ + QHN + G G A A + ++ +LG+GN+V
Sbjct: 189 FGANPNKITEYISTEQYDQHNPAVKDGLAGLGEALQSLAEAGMPMIYEKNHIILGEGNFV 248
Query: 207 --VSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE-VMPKVEDLTNRGKF 254
VS G D V++ YD+FR+ENGK+VEHWD E +MP+ E + GKF
Sbjct: 249 LSVSEGVFMKDKVSF--YDLFRIENGKVVEHWDTIEKIMPESEAKNSNGKF 297
>gi|71281216|ref|YP_269737.1| hypothetical protein CPS_3038 [Colwellia psychrerythraea 34H]
gi|71146956|gb|AAZ27429.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
Length = 253
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 69/229 (30%), Positives = 116/229 (50%), Gaps = 13/229 (5%)
Query: 33 YIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVT 92
YIQH+ +G G A F + P ++ ++R ED + VF H+ + + + V
Sbjct: 31 YIQHNPHTKEGNIGLAELFKQIAKTGP--RVNMIRVFEDKDFVFAHMEYHFSTLK---VA 85
Query: 93 TDTFREDENGCIVEHWDVIDYYRTPENDQLDQIFGDFEIKDLDKKAENKKLVRRFLTEIF 152
+ FR E+G VEHWD + + + G +D D N+ V F EI
Sbjct: 86 FEVFRF-EDGFAVEHWDNMQLMQKVNASGRSMLDGYLITEDHDLTEFNRSRVSLFANEIL 144
Query: 153 QNGELEQWSDYVADD-LIQHNHDIGQGSAAYKNYVA-----EYSVTFDFVFQLLGQGNYV 206
+L+ D+V DD IQH+ + G +A ++ ++ +Y +T+ + ++L +GN+V
Sbjct: 145 IKRKLDLLIDFVCDDNFIQHSPLLADGISALRSTLSATSKQKYKITYSKIHRVLAEGNFV 204
Query: 207 VSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKE-VMPKVEDLTNRGKF 254
+S + +D + YD++R+E GKIVEHWD E + P+ E + GKF
Sbjct: 205 LSVSEGLMDEKHCSFYDLYRIEKGKIVEHWDTIEPIPPRTEWKNDNGKF 253
>gi|118074510|ref|ZP_01542674.1| protein of unknown function DUF1486 [Shewanella woodyi ATCC 51908]
gi|118021092|gb|EAV34932.1| protein of unknown function DUF1486 [Shewanella woodyi ATCC 51908]
Length = 276
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 75/240 (31%), Positives = 115/240 (47%), Gaps = 18/240 (7%)
Query: 26 AQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIV--RTIEDGNLVFVHVHQYL 83
A ++ IQH+ VP+G AA D E I R I +GN+V H ++Y
Sbjct: 44 AATMAPDLIQHNQAVPNG----AAVLIDLIPTLKESGISATTHRLISEGNMVVAH-NEYK 98
Query: 84 NG---GEAQWVTTDTFREDENGCIVEHWDVIDYYRTPENDQLDQIFGDFEIKDLDKKAEN 140
N G D FR E+G + EHWD + P Q G + DLDK AEN
Sbjct: 99 NAKVFGGDHLAAFDVFR-IEDGKVAEHWDNLTPVTAPNPSGRTQFDGTTVVTDLDKTAEN 157
Query: 141 KKLVRRFLTEIFQNGELEQWSDYVADD-LIQHNHDI-----GQGSAAYKNYVAEYSVTFD 194
K +V F+ ++ ++ +DYV+ + +QHN + G G A A S+T+
Sbjct: 158 KAVVTSFVYDVLHGKAPDKITDYVSTETYLQHNSGVADGLDGLGEAIKAMADAGLSMTYS 217
Query: 195 FVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKEVMPKVEDLTNRGKF 254
++ +GN+V + + + G A YD+FR++ GKIVEHWD + + + + + GKF
Sbjct: 218 DTHMIIAEGNFVFTASEGEFSGDHVAFYDLFRVDGGKIVEHWDVIQTISE-KSANDSGKF 276
>gi|126734591|ref|ZP_01750337.1| hypothetical protein RCCS2_11979 [Roseobacter sp. CCS2]
gi|126715146|gb|EBA12011.1| hypothetical protein RCCS2_11979 [Roseobacter sp. CCS2]
Length = 263
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 33 YIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNG---GEAQ 89
YIQH+ VP G + F E + R I +G++V +H + Y N G
Sbjct: 38 YIQHNVAVPTGADPILGFIPVLEESGI--TLTTHRVITEGDMVVLH-NTYDNAQALGSEI 94
Query: 90 WVTTDTFREDENGCIVEHWDVIDYYRTPENDQLDQIFGDFEIKDLDKKAENKKLVRRFLT 149
+V D FR +G +VEHWD + G E+ D+D A+NK LV F+
Sbjct: 95 FVAFDVFRV-ADGQVVEHWDNLQVPPAKTVSGRTMTDGPTEVVDIDLTADNKALVEGFIA 153
Query: 150 EIFQNGELEQWSDYVADDL-IQHNHDIGQG-----SAAYKNYVAEYSVTFDFVFQLLGQG 203
++ Q ++ +DY++ DL +QHN +G G +A A + + ++ +G
Sbjct: 154 DVLQGAAPDRITDYISPDLYLQHNPMVGDGLDGLGAALTAMAEAGQPMAYAETHIVVAEG 213
Query: 204 NYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKEVMPKVEDLTNRGKF 254
N+V + + I A +D+FR++ GKIVEHWD +P E + GKF
Sbjct: 214 NFVFAASEGTIGETPTAFFDLFRIDGGKIVEHWDTVSEIP-AEMPHDNGKF 263
>gi|32033902|ref|ZP_00134173.1| COG4922: Uncharacterized protein conserved in bacteria
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208655|ref|YP_001053880.1| hypothetical protein APL_1187 [Actinobacillus pleuropneumoniae L20]
gi|126097447|gb|ABN74275.1| hypothetical protein APL_1187 [Actinobacillus pleuropneumoniae L20]
Length = 150
Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/109 (42%), Positives = 60/109 (55%)
Query: 3 QQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQ 62
Q KNA Y +V E + VG Y+QH+ V DG + F FA F + HP+ +
Sbjct: 28 QNKKNALEFYELVFNQHKVQEGTDKYVGKEYLQHNPTVADGGKAFVDAFAPFLKEHPQSR 87
Query: 63 IKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVI 111
+I R + +G+LV +HVH LN + D FR DENG IVEHWDVI
Sbjct: 88 AEIKRVVAEGDLVMLHVHSTLNPQDKGEAVVDIFRFDENGKIVEHWDVI 136
>gi|152979751|ref|YP_001345380.1| protein of unknown function DUF1486 [Actinobacillus succinogenes
130Z]
gi|150841474|gb|ABR75445.1| protein of unknown function DUF1486 [Actinobacillus succinogenes
130Z]
Length = 165
Score = 87.8 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 7 NAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIV 66
NA Y A +V EA + VG+ Y+QH+ V DG + F F F +HP+ + +I
Sbjct: 47 NALAFYEMAFNRHKVQEATEKYVGEPYLQHNPDVADGGQAFIDAFVPFLNKHPKSKAEIK 106
Query: 67 RTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPE 118
R + DG+LV +HVH ++ + D FR DENG IVEHWDVI + PE
Sbjct: 107 RVMADGDLVMLHVHSTMDEKDRGEAVVDIFRFDENGKIVEHWDVIQ--QVPE 156
>gi|150380200|ref|ZP_01919272.1| protein of unknown function DUF1486 [Shewanella sediminis HAW-EB3]
gi|150254552|gb|EDM92252.1| protein of unknown function DUF1486 [Shewanella sediminis HAW-EB3]
Length = 254
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 66/222 (29%), Positives = 111/222 (50%), Gaps = 13/222 (5%)
Query: 31 DTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNG---GE 87
+ YIQH+ VP G F + K R + DG+ + +H + Y N G
Sbjct: 27 EDYIQHNPHVPTGLAPAIGFLPVL--KEAGLTYKNHRLLVDGDFIVMH-NTYNNAEAFGA 83
Query: 88 AQWVTTDTFREDENGCIVEHWDVIDYYRTPENDQLDQIFGDFEIKDLDKKAENKKLVRRF 147
+ VT D +R + G + EHWD I Q G + D DK +NK+L+ F
Sbjct: 84 KEVVTFDVWRM-QGGQVAEHWDAISPVIKETASGRSQFDGPTLVTDTDKTKDNKQLIANF 142
Query: 148 LTEIFQNGELEQWSDYVADDLI-QHNHDIGQGSAAYKN---YVAEYSVTFDF--VFQLLG 201
+ ++F E+ ++Y++ + QHN + G + Y+A + FD+ V ++LG
Sbjct: 143 MEDVFFGKAPEKITEYISTEQYDQHNTMVKDGLDGLNDALAYLASQNNMFDYHKVHRILG 202
Query: 202 QGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKEVMP 243
+GN+V++ + + + A YD+FR+++GKIVEHWD + +P
Sbjct: 203 EGNFVLTQSEGRWNDKPQAFYDLFRIKDGKIVEHWDIIQEVP 244
>gi|37526250|ref|NP_929594.1| hypothetical protein plu2348 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785680|emb|CAE14641.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 257
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 14/221 (6%)
Query: 33 YIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVT 92
+I+HS P KEG A + HP+ + R ++DG+LV +H ++ + V
Sbjct: 35 FIEHS---PLVKEGLAGL-RELVWTHPKLHHETYRVLQDGDLVAIH-GRFTGLDDWPLVG 89
Query: 93 TDTFREDENGCIVEHWDVIDYYRTPENDQLDQIFGDFEIKDLDKKAENKKLVRRFLTEIF 152
D +R +G IVEHWD + P Q+ G E D + +N++LV F T
Sbjct: 90 FDLYRV-ADGLIVEHWDGLVPQAAPNVSGRTQLDGPTEAGDDHDREKNRELVVNFFTRTL 148
Query: 153 QNGELEQWSDYVADDLI-QHNHDIGQGSAAYKNYVAEY-----SVTFDFVFQLLGQGNYV 206
G E++ +Y +L QH+ DI G+AA +++ + + + + + + G +V
Sbjct: 149 IEGHYEEFGNYTNGELFRQHSPDIPDGTAAVISFLEQLRDEGQGLHYTKIHRTVADGQFV 208
Query: 207 VSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKEVMPKVED 247
+++ + I G ++ ++++R+E+GK+ E WD + P ED
Sbjct: 209 LTHSEGSIAGARHSYFELWRIEDGKVAELWD--AITPVPED 247
>gi|126729404|ref|ZP_01745218.1| hypothetical protein SSE37_24429 [Sagittula stellata E-37]
gi|126710394|gb|EBA09446.1| hypothetical protein SSE37_24429 [Sagittula stellata E-37]
Length = 126
Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/105 (41%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 7 NAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIV 66
NA Y R EA A VGD YIQH+ V GKEGF A+F +P ++++ V
Sbjct: 10 NARAFYDMMFNQCRPREAVAAYVGDDYIQHNPHVASGKEGFIAYFERMAREYPGKRVEFV 69
Query: 67 RTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVI 111
RT+ +G+LV +H HQ + + D FR D G IVEHWDV+
Sbjct: 70 RTVAEGDLVVLHCHQIWP--DEDYAGIDIFRFDAEGRIVEHWDVL 112
>gi|109897798|ref|YP_661053.1| protein of unknown function DUF1486 [Pseudoalteromonas atlantica
T6c]
gi|109700079|gb|ABG39999.1| protein of unknown function DUF1486 [Pseudoalteromonas atlantica
T6c]
Length = 127
Score = 80.5 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 19 GRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVH 78
G A+A A VGDTYIQH+ V DGK+GF +F + E +P + I+ VR I G+LV +H
Sbjct: 22 GEPAKAVALYVGDTYIQHNPAVKDGKQGFIDYFTEMAEDYPVKSIEFVRAIAQGDLVALH 81
Query: 79 VHQYLNGGEAQWVTTDTFREDENGCIVEHWDVI 111
HQ ++T D FR D+ G IVEHWD I
Sbjct: 82 THQTWP-DNMHYITMDFFRFDDAGKIVEHWDSI 113
>gi|126641136|ref|YP_001084120.1| hypothetical protein A1S_1088 [Acinetobacter baumannii ATCC 17978]
gi|126387020|gb|ABO11518.1| hypothetical protein A1S_1088 [Acinetobacter baumannii ATCC 17978]
Length = 199
Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 8/191 (4%)
Query: 62 QIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPENDQ 121
Q + VR + DGNLV +H ++ E V D +R ++G IVEHWD + P
Sbjct: 2 QHEAVRVLADGNLVAIH-GRFQGLDENPLVGFDIYRV-KDGKIVEHWDGLVAEAAPNVSG 59
Query: 122 LDQIFGDFEIKDLDKKAENKKLVRRFLTEIFQNGELEQWSDYV-ADDLIQHNHDIGQGSA 180
Q+ G EI +N+++V F + +G E + +Y D IQH+ DIG G
Sbjct: 60 RTQLDGPTEIVTHHDPEKNREIVTSFFKKSLIDGNYEAFKEYTDGDQFIQHSPDIGDGVK 119
Query: 181 AYKNYVAEY-----SVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLENGKIVEH 235
A +++ + + + + G +V+++ + I G +A ++++R++NGKIVE
Sbjct: 120 AVIDFLNNIRNEGQGLVYSKTHRSIADGQFVLTHSEGSIAGNRHAYFELWRVDNGKIVEL 179
Query: 236 WDNKEVMPKVE 246
WD +P+ E
Sbjct: 180 WDAIPAVPEDE 190
>gi|86146212|ref|ZP_01064537.1| hypothetical protein MED222_15911 [Vibrio sp. MED222]
gi|85835923|gb|EAQ54056.1| hypothetical protein MED222_15911 [Vibrio sp. MED222]
Length = 297
Score = 77.4 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 74/229 (32%), Positives = 106/229 (46%), Gaps = 24/229 (10%)
Query: 29 VGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEA 88
VGDTYIQH+T DG A P ++ I RTI +G V +H + G A
Sbjct: 57 VGDTYIQHATAYGDGPAELIKAVAGELTADPGVKVDIYRTIAEGPYVAIHSVWTTSDG-A 115
Query: 89 QWVTTDTFREDENGCIVEHWDVIDYYRTPENDQLDQIF---GDFEIKDLDKKAENKKLVR 145
++V D +RE ENG +VEHWD Y + PE + D I D + E +
Sbjct: 116 EYVYVDIWRE-ENGMLVEHWD--HYQQVPEKSENKNTMYQGPDANIYDATQDIERNRGRA 172
Query: 146 RFLTEIFQN-GELEQWSDYVADD-LIQHNHDIGQGSAA---YKNYVAEYSVTFDF-VFQL 199
+ + F+N + Y++ + IQHN ++ G A Y +Y+ + +
Sbjct: 173 IAVLKSFENPADTSALKKYISSETYIQHNPEVPNGRKALVGYLDYLNSNGTKLKTEIAKT 232
Query: 200 LGQGNYVVSYGQTQID-------GVAYAQYDIFRLEN-GKIVEHWDNKE 240
+ G+ V+ + + QID GV Y DIFR N GKIVEHWD E
Sbjct: 233 IAMGDMVLVHSK-QIDLGKKGDLGVGY--IDIFRFNNEGKIVEHWDIAE 278
>gi|84385561|ref|ZP_00988592.1| hypothetical protein V12B01_25544 [Vibrio splendidus 12B01]
gi|84379541|gb|EAP96393.1| hypothetical protein V12B01_25544 [Vibrio splendidus 12B01]
Length = 127
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
+ Q +NA Y A G ++A VGD YIQH+ V DGK+GF +F + +P+
Sbjct: 5 LRQNKENAIAFYRTAYM-GEPSKAVELYVGDDYIQHNPVVTDGKQGFIDYFEEMSRDYPK 63
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVI 111
+ I+ +R I +G+ V +H Q GE ++VT D FR D NG IVEHWD I
Sbjct: 64 KDIEFLRVIAEGDQVALHTRQTWPAGE-EYVTMDFFRFDSNGKIVEHWDSI 113
>gi|124876799|gb|EAY66789.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
Length = 198
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 31 DTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQW 90
D Y QH+ VPDGK+ F ++F F+++P + +IVR+ DG+LV++HVH G+
Sbjct: 105 DDYKQHNPHVPDGKQPFVSYFVGAFQKNPASRARIVRSAADGDLVYLHVHATERPGDRGE 164
Query: 91 VTTDTFREDENGCIVEHWDVI 111
D FR ++G IVEHWDVI
Sbjct: 165 AVVDIFRV-KDGKIVEHWDVI 184
>gi|83942747|ref|ZP_00955208.1| hypothetical protein EE36_16942 [Sulfitobacter sp. EE-36]
gi|83846840|gb|EAP84716.1| hypothetical protein EE36_16942 [Sulfitobacter sp. EE-36]
Length = 127
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 7 NAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIV 66
N Y D R A+A A+ G YIQH+ V DGK F +F HP + +++
Sbjct: 10 NVIAFYEMMFNDCRPADAIARYAGAQYIQHNPHVADGKAAFVDYFERMAREHPGKHVEVK 69
Query: 67 RTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVI 111
R+ DGN V +H HQ G + D FR D+ G IVEHWDV+
Sbjct: 70 RSFVDGNHVILHCHQLWPNG-PDYAGMDIFRLDDQGKIVEHWDVL 113
>gi|118712385|ref|ZP_01564956.1| protein of unknown function DUF1486 [Burkholderia cenocepacia
MC0-3]
gi|118650277|gb|EAV57071.1| protein of unknown function DUF1486 [Burkholderia cenocepacia
MC0-3]
Length = 158
Score = 74.3 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 31 DTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQW 90
D Y QH+ VPDGK+ F ++F F+++P + +IVR+ DG+LV++HVH G+
Sbjct: 65 DDYKQHNPHVPDGKQPFVSYFVGAFQKNPASRARIVRSAADGDLVYLHVHATERPGDRGE 124
Query: 91 VTTDTFREDENGCIVEHWDVI 111
D FR ++G IVEHWDVI
Sbjct: 125 AVVDIFRV-KDGKIVEHWDVI 144
>gi|91225763|ref|ZP_01260792.1| hypothetical protein V12G01_07223 [Vibrio alginolyticus 12G01]
gi|91189652|gb|EAS75927.1| hypothetical protein V12G01_07223 [Vibrio alginolyticus 12G01]
Length = 168
Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
+ + +NA Y A + G +A VGD YIQH+ V +G E F +F +P+
Sbjct: 46 LQENKRNAIAFYETAYR-GNPRKAVEDYVGDEYIQHNPLVGNGPEAFIEYFERMQNEYPD 104
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVI 111
+ I VR I +GNLV +H HQ + ++VT D FR D NG IVEHWD +
Sbjct: 105 KDITFVRAIAEGNLVALHTHQTWP-NDIEYVTMDFFRFDHNGKIVEHWDAL 154
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 23/163 (14%)
Query: 97 REDENGCIV-----EHWDVIDY----YRTPENDQLDQIFGDFEIKDLDKKAENKKLVRRF 147
R DE C+ + W ++ + YR P++ G +++ +D + ENK+ F
Sbjct: 5 RSDEGCCLAAFFVRDVWSLLKFKDYDYRYPQD-------GATQVRKMDLQ-ENKRNAIAF 56
Query: 148 LTEIFQNGELEQWSDYVADDLIQHNHDIGQGSAAYKNYVAEYSVTF---DFVF-QLLGQG 203
++ + DYV D+ IQHN +G G A+ Y + D F + + +G
Sbjct: 57 YETAYRGNPRKAVEDYVGDEYIQHNPLVGNGPEAFIEYFERMQNEYPDKDITFVRAIAEG 116
Query: 204 NYVVSYG-QTQIDGVAYAQYDIFRLE-NGKIVEHWDNKEVMPK 244
N V + QT + + Y D FR + NGKIVEHWD + +PK
Sbjct: 117 NLVALHTHQTWPNDIEYVTMDFFRFDHNGKIVEHWDALQEIPK 159
>gi|78061870|ref|YP_371778.1| hypothetical protein Bcep18194_B1020 [Burkholderia sp. 383]
gi|77969755|gb|ABB11134.1| conserved hypothetical protein [Burkholderia sp. 383]
Length = 158
Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 31 DTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQW 90
D Y QH+ VPDGK+ F ++F F+++P + +IVR+ DG+LV++HVH G+
Sbjct: 65 DDYKQHNPHVPDGKKPFVSYFVGAFQKNPASRARIVRSATDGDLVYLHVHATERPGDRGE 124
Query: 91 VTTDTFREDENGCIVEHWDVI 111
D FR ++G IVEHWDVI
Sbjct: 125 AVVDIFRV-KDGKIVEHWDVI 144
>gi|86132768|ref|ZP_01051360.1| hypothetical protein MED134_14246 [Cellulophaga sp. MED134]
gi|85816722|gb|EAQ37908.1| hypothetical protein MED134_14246 [Dokdonia donghaensis MED134]
Length = 126
Score = 73.9 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 2 SQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPER 61
+Q +NA N Y A + G +A VGD YIQH+ V +G +GF +F +PE+
Sbjct: 5 AQMKENAINFYKMAYE-GNPKKAVELYVGDEYIQHNPDVANGTQGFIDYFERMQAEYPEK 63
Query: 62 QIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVI 111
I VR I +LV +H HQ G + Q++T D FR D N IVEHWD I
Sbjct: 64 SINFVRAIAQDDLVALHTHQVWPGND-QYITMDFFRFDNNLKIVEHWDSI 112
>gi|107025982|ref|YP_623493.1| protein of unknown function DUF1486 [Burkholderia cenocepacia AU
1054]
gi|116692833|ref|YP_838366.1| protein of unknown function DUF1486 [Burkholderia cenocepacia
HI2424]
gi|105895356|gb|ABF78520.1| protein of unknown function DUF1486 [Burkholderia cenocepacia AU
1054]
gi|116650833|gb|ABK11473.1| protein of unknown function DUF1486 [Burkholderia cenocepacia
HI2424]
Length = 158
Score = 73.9 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 31 DTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQW 90
D Y QH+ VPDGK+ F ++F F++ P + +IVR+ DG+LV++HVH G+
Sbjct: 65 DDYKQHNPHVPDGKQPFVSYFVGAFQKSPASRARIVRSAADGDLVYLHVHATERPGDRGE 124
Query: 91 VTTDTFREDENGCIVEHWDVI 111
D FR ++G IVEHWDVI
Sbjct: 125 AVVDIFRV-KDGKIVEHWDVI 144
>gi|88712014|ref|ZP_01106101.1| hypothetical protein FB2170_14033 [Flavobacteriales bacterium
HTCC2170]
gi|88709420|gb|EAR01653.1| hypothetical protein FB2170_14033 [Flavobacteriales bacterium
HTCC2170]
Length = 127
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/111 (40%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
++Q KNA Y A + G A VG+ YIQH+ V DGK+ F A+F +P+
Sbjct: 5 LNQNKKNAIAFYKMAYE-GNPKRAVELFVGNEYIQHNPLVGDGKKPFIAYFERMQNEYPK 63
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVI 111
+ I+ VR I +G+LV +H HQ + + ++VT D FR D G IVEHWD +
Sbjct: 64 KSIEFVRVISEGDLVALHTHQ-IWPDDMEYVTMDFFRFDRYGKIVEHWDAM 113
>gi|86134759|ref|ZP_01053341.1| hypothetical protein MED152_08605 [Tenacibaculum sp. MED152]
gi|85821622|gb|EAQ42769.1| hypothetical protein MED152_08605 [Polaribacter dokdonensis MED152]
Length = 125
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 29 VGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEA 88
VGD YIQH+ V DG EGF +F + +P++ I+ VR I +G+LV +H HQ +
Sbjct: 30 VGDEYIQHNPDVADGIEGFINYFYRMQQEYPKKSIEFVRCIAEGDLVALHTHQTWPEND- 88
Query: 89 QWVTTDTFREDENGCIVEHWDVI 111
++VT D FR D+ G I EHWD I
Sbjct: 89 EYVTMDFFRFDDKGKICEHWDAI 111
>gi|83953986|ref|ZP_00962707.1| hypothetical protein NAS141_07163 [Sulfitobacter sp. NAS-14.1]
gi|83841931|gb|EAP81100.1| hypothetical protein NAS141_07163 [Sulfitobacter sp. NAS-14.1]
Length = 127
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 7 NAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIV 66
N Y D R A+A A+ G YIQH+ V DGK F +F HP + +++
Sbjct: 10 NVIAFYEMMFNDCRPADAIARYAGAQYIQHNPHVADGKAAFVDYFERMAREHPGKHVEVK 69
Query: 67 RTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVI 111
R+ DG+ V +H HQ G + D FR D+ G IVEHWDV+
Sbjct: 70 RSFVDGDHVILHCHQLWPNG-PDYAGMDIFRLDDQGKIVEHWDVL 113
>gi|89890740|ref|ZP_01202249.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
gi|89516885|gb|EAS19543.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
Length = 125
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 18 DGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFV 77
+G EA A+ VG YIQH+ V DG +GF +F +P++ I+ VR I +L+ +
Sbjct: 19 EGNPREAIARFVGHEYIQHNPDVADGTKGFIDYFEKMQAEYPDKTIEFVRAIAQDDLIAL 78
Query: 78 HVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVI 111
H HQ + Q+VT D FR D+NG I EHWD I
Sbjct: 79 HTHQTWPDDD-QYVTMDFFRFDDNGKICEHWDAI 111
>gi|84352373|ref|ZP_00977337.1| COG4922: Uncharacterized protein conserved in bacteria
[Burkholderia cenocepacia PC184]
Length = 143
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 31 DTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQW 90
D Y QH+ VPDGK+ F ++F F+++P + +IVR+ DG+LV++HVH G+
Sbjct: 50 DDYKQHNPHVPDGKQPFVSYFVGAFQKNPASRARIVRSAADGDLVYLHVHATERPGDRGE 109
Query: 91 VTTDTFREDENGCIVEHWDVI 111
D FR ++G IVEHWDVI
Sbjct: 110 AVVDIFRV-KDGKIVEHWDVI 129
>gi|15889288|ref|NP_354969.1| hypothetical protein AGR_C_3631 [Agrobacterium tumefaciens str.
C58]
gi|15157122|gb|AAK87754.1| AGR_C_3631p [Agrobacterium tumefaciens str. C58]
Length = 163
Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 26 AQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNG 85
A + D+Y QH+ VPDGK+ F +F FF+ +P+ + +IVR+ DG+LV++H+H
Sbjct: 65 AAVIVDSYKQHNPMVPDGKKPFVDYFTGFFKENPQAKSRIVRSATDGDLVYLHIHSTDKE 124
Query: 86 GEAQWVTTDTFREDENGCIVEHWDVI 111
G D FR + G I EHWDVI
Sbjct: 125 GARGAAIVDIFRVTD-GKITEHWDVI 149
>gi|19704557|ref|NP_604119.1| hypothetical protein FN1222 [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19714845|gb|AAL95418.1| Hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
Length = 129
Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 18 DGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFV 77
DG +A VGD Y QH+ V DGK G +F + +P +++K VR I G+LV +
Sbjct: 21 DGEPEKAIKLYVGDEYRQHNPMVADGKAGIIEYFTRMKKEYPIKEVKFVRAIAQGDLVAM 80
Query: 78 HVHQ-YLNGGEAQWVTTDTFREDENGCIVEHWDVI 111
H HQ + ++VT D FR DEN IVEHWD I
Sbjct: 81 HTHQIWGEPDNKEYVTMDFFRFDENNKIVEHWDSI 115
>gi|84387136|ref|ZP_00990158.1| hypothetical protein V12B01_04253 [Vibrio splendidus 12B01]
gi|84377997|gb|EAP94858.1| hypothetical protein V12B01_04253 [Vibrio splendidus 12B01]
Length = 297
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 71/228 (31%), Positives = 104/228 (45%), Gaps = 22/228 (9%)
Query: 29 VGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEA 88
VGDTYIQH+T DG A P ++ I RTI +G V +H + G A
Sbjct: 57 VGDTYIQHATAYGDGPAELIKAVAGELTADPGVKVDIYRTIAEGPYVAIHSVWTTSDG-A 115
Query: 89 QWVTTDTFREDENGCIVEHWDVIDYYRTPENDQLDQIF---GDFEIKDLDKKAENKKLVR 145
++V D +RE ENG +VEHWD Y + PE + D I D + E +
Sbjct: 116 EYVYVDIWRE-ENGMLVEHWD--HYQQVPEKSENKNTMYQGPDANIYDATQDIERNRGRA 172
Query: 146 RFLTEIFQN-GELEQWSDYVADD-LIQHNHDIGQGSAA---YKNYVAEYSVTFDF-VFQL 199
+ + F N + Y++ + IQHN ++ G A Y +Y+ + +
Sbjct: 173 IAVLKSFDNPADTSALKKYISSETYIQHNPEVPNGRKALVGYLDYLNSNGTKLKTEIAKT 232
Query: 200 LGQGNYVVSYG-QTQID-----GVAYAQYDIFRLEN-GKIVEHWDNKE 240
+ G+ V+ + QT + GV Y DIFR + G+IVEHWD E
Sbjct: 233 IAMGDMVLVHSKQTDLSKKGDLGVGY--IDIFRFNSEGEIVEHWDIAE 278
>gi|83857149|ref|ZP_00950677.1| hypothetical protein CA2559_10133 [Croceibacter atlanticus
HTCC2559]
gi|83848516|gb|EAP86385.1| hypothetical protein CA2559_10133 [Croceibacter atlanticus
HTCC2559]
Length = 125
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 3 QQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQ 62
+Q KN + +G +A VG YIQH+ V DG GF +F +P +
Sbjct: 4 EQNKNRAIAFYEMAYNGNPKKAIENFVGKEYIQHNPHVEDGTLGFINYFERMHAEYPNKS 63
Query: 63 IKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVI 111
I+ VR I +G+LV +H HQ + ++VT D F+ D+NG I EHWDVI
Sbjct: 64 IEFVRCIAEGDLVALHTHQTWP-DQDEYVTMDFFKFDDNGKICEHWDVI 111
>gi|17935885|ref|NP_532675.1| hypothetical protein Atu1998 [Agrobacterium tumefaciens str. C58]
gi|17740452|gb|AAL42991.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 158
Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 26 AQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNG 85
A + D+Y QH+ VPDGK+ F +F FF+ +P+ + +IVR+ DG+LV++H+H
Sbjct: 60 AAVIVDSYKQHNPMVPDGKKPFVDYFTGFFKENPQAKSRIVRSATDGDLVYLHIHSTDKE 119
Query: 86 GEAQWVTTDTFREDENGCIVEHWDVI 111
G D FR + G I EHWDVI
Sbjct: 120 GARGAAIVDIFRVTD-GKITEHWDVI 144
>gi|116186057|ref|ZP_01475957.1| hypothetical protein VEx2w_02001463 [Vibrio sp. Ex25]
Length = 125
Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 1 MSQQVKNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPE 60
+ + +NA Y A + G +A VGD YIQH+ V +G E F +F +P
Sbjct: 3 LQENKRNAIAFYEIAYR-GNPRKAVEDYVGDEYIQHNPLVGNGPEAFIEYFERMQNEYPN 61
Query: 61 RQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVI 111
+ I VR I +GNLV +H HQ + ++VT D FR D NG IVEHWD +
Sbjct: 62 KDITFVRAIAEGNLVALHTHQTWP-NDIEYVTMDFFRFDHNGKIVEHWDAL 111
>gi|84683945|ref|ZP_01011847.1| hypothetical protein RB2654_15891 [Rhodobacterales bacterium
HTCC2654]
gi|84667698|gb|EAQ14166.1| hypothetical protein RB2654_15891 [Rhodobacterales bacterium
HTCC2654]
Length = 127
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 6 KNAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKI 65
+N Y D R EA + VG YIQH+ V GK+GF A+F +P +++
Sbjct: 9 RNVMEFYAMMFNDCRPREAIERYVGVEYIQHNPHVATGKDGFIAYFERMARDYPGKEVLF 68
Query: 66 VRTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVI 111
+G+ V +H HQ G ++ D FR DE+G IVEHWDV+
Sbjct: 69 KGAWAEGDRVILHCHQIWPEG-LEYAGIDIFRLDEHGKIVEHWDVL 113
>gi|33598870|ref|NP_886513.1| possible membrane protein [Bordetella parapertussis 12822]
gi|33575000|emb|CAE39666.1| possible membrane protein [Bordetella parapertussis]
Length = 174
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 17 QDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVF 76
QD V EA + + Y+QH+ + DG FF +FE++PE ++I R I +G LV
Sbjct: 67 QDRNVEEAARRYLSPAYVQHNPYMADGVSPLVDFFLPYFEQNPEASVEIKRVIAEGELVV 126
Query: 77 VHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEN 119
VH + G+ D FR +NG IVEHWDV PEN
Sbjct: 127 VHNLWKESPGDRGQAVVDIFRV-QNGKIVEHWDVSQ--EIPEN 166
>gi|126734590|ref|ZP_01750336.1| hypothetical protein RCCS2_11974 [Roseobacter sp. CCS2]
gi|126715145|gb|EBA12010.1| hypothetical protein RCCS2_11974 [Roseobacter sp. CCS2]
Length = 128
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 7 NAHNLYIHAIQDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIV 66
N Y D R A+A A G YIQH+ V DGK+ F A+F + +P +++ I
Sbjct: 11 NVIAFYEMMFNDCRPADAIAIYAGAEYIQHNPHVGDGKDAFIAYFEKMAKDYPCKRVDIK 70
Query: 67 RTIEDGNLVFVHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVI 111
R D V +H HQ G ++ D FR D +G I+EHWDV+
Sbjct: 71 RAFADEQHVILHCHQIWPAG-LEYAGIDIFRLDHDGKIIEHWDVL 114
>gi|33603947|ref|NP_891507.1| possible membrane protein [Bordetella bronchiseptica RB50]
gi|33568923|emb|CAE35337.1| possible membrane protein [Bordetella bronchiseptica RB50]
Length = 174
Score = 68.6 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 17 QDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVF 76
QD V EA + + Y+QH+ + DG FF +FE++PE ++I R I +G LV
Sbjct: 67 QDRDVEEAARRYLSPAYVQHNPYMADGVSPLVDFFLPYFEQNPEASVEIKRVIAEGELVV 126
Query: 77 VHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEN 119
VH + G+ D FR +NG IVEHWDV PEN
Sbjct: 127 VHNLWKESPGDRGQAVVDIFRV-QNGKIVEHWDVSQ--EIPEN 166
>gi|78060922|ref|YP_370830.1| hypothetical protein Bcep18194_B0069 [Burkholderia sp. 383]
gi|77968807|gb|ABB10186.1| conserved hypothetical protein [Burkholderia sp. 383]
Length = 157
Score = 67.4 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 22 AEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQ 81
A+A VGD Y+QH+ DG++GF F A +++P+ +I R+ DG+ V +HVH
Sbjct: 55 ADAALAYVGDRYVQHNPNAADGRDGFRKFVAFLRDKYPQSHSEIKRSFVDGDYVILHVHA 114
Query: 82 YLNGGEAQWVTTDTFREDENGCIVEHWDV 110
G D F+ ENG IVEHWDV
Sbjct: 115 VREPGTRGSAIMDIFKL-ENGKIVEHWDV 142
>gi|115359644|ref|YP_776782.1| protein of unknown function DUF1486 [Burkholderia cepacia AMMD]
gi|115284932|gb|ABI90448.1| protein of unknown function DUF1486 [Burkholderia cepacia AMMD]
Length = 162
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 22 AEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQ 81
A+A VGD Y+QH+ DG++GF F A +++P+ +I R DG+ V +HVH
Sbjct: 60 ADAALAYVGDQYVQHNPNAADGRDGFRKFVAFLRDKYPQSHSEIKRAFVDGDYVILHVHA 119
Query: 82 YLNGGEAQWVTTDTFREDENGCIVEHWDV 110
G D FR E+G IVEHWDV
Sbjct: 120 VREPGTRGSAIMDIFRL-EHGKIVEHWDV 147
>gi|83952522|ref|ZP_00961253.1| hypothetical protein ISM_10231 [Roseovarius nubinhibens ISM]
gi|83836195|gb|EAP75493.1| hypothetical protein ISM_10231 [Roseovarius nubinhibens ISM]
Length = 138
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 29 VGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEA 88
VG YIQH+ V DGK GF +F PE+++ I R + + +LV +H HQ G +
Sbjct: 43 VGADYIQHNPHVRDGKAGFIDYFERMAREFPEKKVIIKRAVAEEDLVVLHCHQIWPGSD- 101
Query: 89 QWVTTDTFREDENGCIVEHWDVI 111
+ D FR D G IVEHWDV+
Sbjct: 102 DYAGMDIFRFDAGGKIVEHWDVL 124
>gi|107027573|ref|YP_625084.1| protein of unknown function DUF1486 [Burkholderia cenocepacia AU
1054]
gi|116693715|ref|YP_839248.1| protein of unknown function DUF1486 [Burkholderia cenocepacia
HI2424]
gi|105896947|gb|ABF80111.1| protein of unknown function DUF1486 [Burkholderia cenocepacia AU
1054]
gi|116651715|gb|ABK12355.1| protein of unknown function DUF1486 [Burkholderia cenocepacia
HI2424]
gi|124876103|gb|EAY66093.1| hypothetical protein BCPG_04467 [Burkholderia cenocepacia PC184]
Length = 157
Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 22 AEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQ 81
A+A VGD Y+QH+ DG++GF F A +++P+ +I R+ DG+ V +HVH
Sbjct: 55 ADAALAYVGDRYVQHNPNAADGRDGFRKFVAFLRDKYPQSHSEIKRSFVDGDYVILHVHA 114
Query: 82 YLNGGEAQWVTTDTFREDENGCIVEHWDV 110
G D FR E+G IVEHWDV
Sbjct: 115 VREPGTRGSAIMDIFRL-EHGKIVEHWDV 142
>gi|84353219|ref|ZP_00978155.1| COG4922: Uncharacterized protein conserved in bacteria
[Burkholderia cenocepacia PC184]
Length = 145
Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 22 AEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQ 81
A+A VGD Y+QH+ DG++GF F A +++P+ +I R+ DG+ V +HVH
Sbjct: 43 ADAALAYVGDRYVQHNPNAADGRDGFRKFVAFLRDKYPQSHSEIKRSFVDGDYVILHVHA 102
Query: 82 YLNGGEAQWVTTDTFREDENGCIVEHWDV 110
G D FR E+G IVEHWDV
Sbjct: 103 VREPGTRGSAIMDIFRL-EHGKIVEHWDV 130
>gi|118713206|ref|ZP_01565773.1| protein of unknown function DUF1486 [Burkholderia cenocepacia
MC0-3]
gi|118649420|gb|EAV56218.1| protein of unknown function DUF1486 [Burkholderia cenocepacia
MC0-3]
Length = 157
Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 22 AEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQ 81
A+A VGD Y+QH+ DG++GF F A +++P+ +I R+ DG+ V +HVH
Sbjct: 55 ADAALAYVGDRYVQHNPNAADGRDGFRKFVAFLRDKYPQSHSEIKRSFVDGDYVILHVHA 114
Query: 82 YLNGGEAQWVTTDTFREDENGCIVEHWDV 110
G D FR E+G IVEHWDV
Sbjct: 115 VREPGTRGSAIMDIFRL-EHGKIVEHWDV 142
>gi|118698433|ref|ZP_01556509.1| protein of unknown function DUF1486 [Burkholderia ambifaria MC40-6]
gi|118643851|gb|EAV50687.1| protein of unknown function DUF1486 [Burkholderia ambifaria MC40-6]
Length = 162
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 22 AEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQ 81
A+A VGD Y+QH+ DG++GF F A +++P+ +I R DG+ V +HVH
Sbjct: 60 ADAALAYVGDQYVQHNPNAADGRDGFRKFVAFLRDKYPQSHSEIKRAFVDGDYVILHVHA 119
Query: 82 YLNGGEAQWVTTDTFREDENGCIVEHWDV 110
D FR E+G IVEHWDV
Sbjct: 120 VREPRTHGSAIMDIFRL-EHGKIVEHWDV 147
>gi|75759306|ref|ZP_00739404.1| Hypothetical protein RBTH_06907 [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74493199|gb|EAO56317.1| Hypothetical protein RBTH_06907 [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 174
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 29 VGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEA 88
VG+ Y QH+ V DG++ F FF + F ++P +I R + +G+ V +HVH N +
Sbjct: 79 VGEEYKQHNPFVADGRKAFMDFFKEDFVKNPNSSAEIKRVVAEGDTVALHVHSRTNSQDK 138
Query: 89 QWVTTDTFREDENGCIVEHWDVI 111
D FR ++G IVEHWDVI
Sbjct: 139 GVAIVDIFR-IKDGKIVEHWDVI 160
Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 10/120 (8%)
Query: 132 KDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSAAYKNYVAEYSV 191
K++ + +NKK+V F E+F ++ YV ++ QHN + G A+ ++ E V
Sbjct: 47 KEVKENEKNKKMVVDFYNEVFNKHNIDIIPKYVGEEYKQHNPFVADGRKAFMDFFKEDFV 106
Query: 192 ----TFDFVFQLLGQGN----YVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKEVMP 243
+ + +++ +G+ +V S +Q GVA DIFR+++GKIVEHWD + +P
Sbjct: 107 KNPNSSAEIKRVVAEGDTVALHVHSRTNSQDKGVAIV--DIFRIKDGKIVEHWDVIQEIP 164
>gi|30019070|ref|NP_830701.1| hypothetical protein BC0915 [Bacillus cereus ATCC 14579]
gi|29894612|gb|AAP07902.1| hypothetical protein BC_0915 [Bacillus cereus ATCC 14579]
Length = 174
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 29 VGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEA 88
V + Y QH+ V DG++ F FF D F ++P +I R + +G+ V +HVH N +
Sbjct: 79 VSEDYKQHNPFVADGRKAFMDFFKDDFVKNPNSSAEIKRVVAEGDTVALHVHSRTNSQDK 138
Query: 89 QWVTTDTFREDENGCIVEHWDVI 111
D FR ++G IVEHWDVI
Sbjct: 139 GVAIVDIFR-IKDGKIVEHWDVI 160
Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Query: 132 KDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSAAYKNYVAEYSV 191
K++ + +NKK+V F E+F ++ YV++D QHN + G A+ ++ + V
Sbjct: 47 KEVKENEKNKKMVVDFYNEVFNKHNIDIIPKYVSEDYKQHNPFVADGRKAFMDFFKDDFV 106
Query: 192 ----TFDFVFQLLGQGN----YVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKEVMP 243
+ + +++ +G+ +V S +Q GVA DIFR+++GKIVEHWD + +P
Sbjct: 107 KNPNSSAEIKRVVAEGDTVALHVHSRTNSQDKGVAIV--DIFRIKDGKIVEHWDVIQEIP 164
>gi|154173883|ref|YP_001407365.1| putative pyruvate kinase [Campylobacter curvus 525.92]
gi|153793020|gb|EAT99703.2| putative pyruvate kinase [Campylobacter curvus 525.92]
Length = 160
Score = 60.5 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 29 VGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEA 88
VG Y QHS DGK F + F + P+ I R DG LVF+H H LN +
Sbjct: 65 VGSEYKQHSPNFKDGKAAFKSAVGGFLKEFPQSSAVIKRIGADGELVFIHNHIKLNPNDR 124
Query: 89 QWVTTDTFREDENGCIVEHWDVI-DYYRTPEND 120
D FR ++G IVEHWDVI D EN+
Sbjct: 125 GQAAVDIFRV-KDGKIVEHWDVIQDLPEKAENN 156
>gi|67078152|ref|YP_245772.1| possible pyruvate kinase [Bacillus cereus E33L]
gi|66970458|gb|AAY60434.1| conserved hypothetical protein [Bacillus cereus E33L]
Length = 174
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 29 VGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEA 88
V + Y QH+ V DG++ F FF + F ++P +I R + +G+ V +HVH N +
Sbjct: 79 VSEDYKQHNPFVADGRKAFMDFFKEDFVKNPNSSAEIKRVVAEGDTVALHVHSRTNSQDK 138
Query: 89 QWVTTDTFREDENGCIVEHWDVI 111
D FR ++G IVEHWDVI
Sbjct: 139 GVAIVDIFR-IKDGKIVEHWDVI 160
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Query: 132 KDLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSAAYKNYVAEYSV 191
K++ + +NKK+V F E+F ++ YV++D QHN + G A+ ++ E V
Sbjct: 47 KEVKENEKNKKMVVDFYNEVFNKHNIDIIPKYVSEDYKQHNPFVADGRKAFMDFFKEDFV 106
Query: 192 ----TFDFVFQLLGQGN----YVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWDNKEVMP 243
+ + +++ +G+ +V S +Q GVA DIFR+++GKIVEHWD + +P
Sbjct: 107 KNPNSSAEIKRVVAEGDTVALHVHSRTNSQDKGVAIV--DIFRIKDGKIVEHWDVIQEIP 164
>gi|114570970|ref|YP_757650.1| hypothetical protein Mmar10_2420 [Maricaulis maris MCS10]
gi|114341432|gb|ABI66712.1| hypothetical protein Mmar10_2420 [Maricaulis maris MCS10]
Length = 222
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 13/193 (6%)
Query: 59 PERQIKIVRTIEDGNLVFVH-VHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTP 117
P + I R ++DG +F+H VH+ + GGE WVT R G + V + +P
Sbjct: 23 PNFEFNIARVLQDGADMFMHSVHEPVAGGEV-WVTMSLVRRSSAGLMTVKRQVSARF-SP 80
Query: 118 ENDQLDQIFGDFEIKDLDKKAE---NKKLVRRFLTEIFQNGELEQWSDYV-ADDLIQHNH 173
+ D + G E +D K E NK V F+ + + G E ++ + H
Sbjct: 81 DGDYC-AVSGAAE-RDPSLKDEASLNKAQVSAFIQMVVREGGAEHRDAFIDRGRFVSHTP 138
Query: 174 DIGQGSAAYKNYVAEY----SVTFDFVFQLLGQGNYVVSYGQTQIDGVAYAQYDIFRLEN 229
VA + + V ++G+G YV + +DG ++ D+ RLE
Sbjct: 139 GSCCRPEGLDALVARRRPRPGLVYHGVDDIVGEGAYVAVFSCFDLDGESFRACDLMRLEA 198
Query: 230 GKIVEHWDNKEVM 242
G+IVEHWD E +
Sbjct: 199 GRIVEHWDVVEAV 211
>gi|89204084|ref|ZP_01182663.1| conserved hypothetical protein [Bacillus weihenstephanensis KBAB4]
gi|89158215|gb|EAR78205.1| conserved hypothetical protein [Bacillus weihenstephanensis KBAB4]
Length = 175
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 29 VGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEA 88
V + Y QH+ V DG++ F FF + F ++P +I R + +G+ V +HVH N +
Sbjct: 80 VSEDYKQHNPFVADGRKAFMDFFKEDFVKNPNSSAEIKRVVAEGDTVALHVHSRANSQDK 139
Query: 89 QWVTTDTFREDENGCIVEHWDVI 111
D FR ++G IVEHWDVI
Sbjct: 140 GVAIVDIFR-IKDGKIVEHWDVI 161
Score = 57.4 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 133 DLDKKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSAAYKNYVAEYSV- 191
D+ +K +NKK+V F E+F ++ YV++D QHN + G A+ ++ E V
Sbjct: 49 DVAEKEKNKKMVVDFYNEVFNKHNIDIIPKYVSEDYKQHNPFVADGRKAFMDFFKEDFVK 108
Query: 192 ---TFDFVFQLLGQGN----YVVSYGQTQIDGVAYAQYDIFRLENGKIVEHWD 237
+ + +++ +G+ +V S +Q GVA DIFR+++GKIVEHWD
Sbjct: 109 NPNSSAEIKRVVAEGDTVALHVHSRANSQDKGVAIV--DIFRIKDGKIVEHWD 159
>gi|110600684|ref|ZP_01388898.1| ester cyclase-like [Geobacter sp. FRC-32]
gi|110548578|gb|EAT61790.1| ester cyclase-like [Geobacter sp. FRC-32]
Length = 158
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 17/119 (14%)
Query: 136 KKAENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSAAYKNYVAE-YSVTFD 194
+K NK L+ RF E+F +L + YV D IQHN + QGSA +K + A ++ D
Sbjct: 25 EKDVNKALIGRFAEEVFVKKDLSEVERYVRADYIQHNPLVKQGSAGFKEFFAAWFAAVPD 84
Query: 195 FVFQL---LGQGNYVVSYG------QTQIDGV-------AYAQYDIFRLENGKIVEHWD 237
+ + L + +G+ V YG + + G+ ++ DIFR+++GK+ EHWD
Sbjct: 85 WNYSLKKIVAEGDEVWVYGTYSGTLEKEWLGIPGNGQKYSFDAVDIFRVQDGKLAEHWD 143
>gi|120610635|ref|YP_970313.1| protein of unknown function DUF1486 [Acidovorax avenae subsp.
citrulli AAC00-1]
gi|120589099|gb|ABM32539.1| protein of unknown function DUF1486 [Acidovorax avenae subsp.
citrulli AAC00-1]
Length = 164
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
Query: 138 AENKKLVRRFLTEIFQNGELEQWSDYVADDLIQHNHDIGQGSAAYKNYVAEYSVTFDF-- 195
A NK+LV F E+F++G++E Y+ +D IQHN + G +K ++A+ +
Sbjct: 46 AHNKRLVYDFWREVFESGQVELADRYMKEDYIQHNPLVATGREPFKQFLAQVTPRSPIQP 105
Query: 196 -----VFQLLGQGNYVVSYGQTQI-----DGVAYAQ--YDIFRLENGKIVEHWD 237
+ ++L +G+ V ++ G Y +D+FR+++G+I EHWD
Sbjct: 106 RVKAPLVRILAEGDMVTMVFARRLPDPRNPGQTYTTTWFDMFRIQDGQIAEHWD 159
>gi|115424449|emb|CAJ51003.1| conserved hypothetical protein [Bordetella avium 197N]
Length = 151
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 17 QDGRVAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVF 76
++ +V EA ++ V ++QH+ + G A +F+ +FE++P+ +I R I +G+LV
Sbjct: 44 EEHQVEEAVSRYVDRQFVQHNPYLESGSAPLAEYFSLYFEQNPQASAEIKRMIAEGDLVV 103
Query: 77 VHVHQYLNGGEAQWVTTDTFREDENGCIVEHWDVIDYYRTPEN 119
VH + T D FR NG IVEHWDV PEN
Sbjct: 104 VHSLLKDGPEDRGQATVDIFRL-TNGKIVEHWDVSQ--EIPEN 143
Score = 53.9 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 15/123 (12%)
Query: 139 ENKKLVRRFLTEIFQNGELEQW-SDYVADDLIQHNHDIGQGSAAYKNYVAEYSVTFDF-- 195
+NK +V+ F +F+ ++E+ S YV +QHN + GSA Y +S+ F+
Sbjct: 30 QNKDVVQAFFRLMFEEHQVEEAVSRYVDRQFVQHNPYLESGSAPLAEY---FSLYFEQNP 86
Query: 196 -----VFQLLGQGNYVVSYGQTQIDGV---AYAQYDIFRLENGKIVEHWDNKEVMPKVED 247
+ +++ +G+ VV + + DG A DIFRL NGKIVEHWD + +P+
Sbjct: 87 QASAEIKRMIAEGDLVVVHSLLK-DGPEDRGQATVDIFRLTNGKIVEHWDVSQEIPENPA 145
Query: 248 LTN 250
TN
Sbjct: 146 NTN 148
>gi|87198732|ref|YP_495989.1| hypothetical protein Saro_0708 [Novosphingobium aromaticivorans DSM
12444]
gi|87134413|gb|ABD25155.1| putative membrane protein [Novosphingobium aromaticivorans DSM
12444]
Length = 141
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 21 VAEAQAQSVGDTYIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVH 80
V +A V YIQH+ GVPDG++ A F H R ++ + + DG+L +H+
Sbjct: 39 VKKAFEAYVAPDYIQHNPGVPDGRDAAIALLQPMFSDH-TRSFEVRKILVDGDLAAIHIF 97
Query: 81 QYLNGGEAQWVTTDTFREDENGCIVEHWDVI 111
N EA+ F ++G IVEHWDVI
Sbjct: 98 ARPN-PEARGAAVADFYRLKDGKIVEHWDVI 127
>gi|52426056|ref|YP_089193.1| hypothetical protein MS2001 [Mannheimia succiniciproducens MBEL55E]
gi|52308108|gb|AAU38608.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 99
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 41/78 (52%)
Query: 33 YIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQWVT 92
Y QH+ V DG + F F + P+ + I R I +G+ V +HVH+ +
Sbjct: 7 YWQHNPRVADGADAFVQAFTQLAQSKPQARGTIKRVIAEGDYVVLHVHRQDTPDDLGRAV 66
Query: 93 TDTFREDENGCIVEHWDV 110
D FR D++G I+EHWDV
Sbjct: 67 VDIFRLDKDGKIIEHWDV 84
>gi|87200894|ref|YP_498151.1| hypothetical protein Saro_2881 [Novosphingobium aromaticivorans DSM
12444]
gi|87136575|gb|ABD27317.1| conserved hypothetical protein [Novosphingobium aromaticivorans DSM
12444]
Length = 150
Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 33 YIQHSTGVPDGKEGFAAFFADFFERHPERQIKIVRTIEDGNLVFVHVHQYLNGGEAQ--- 89
YIQH+ G++ F F +P ++ I R I DGNLV VH H + G+A
Sbjct: 55 YIQHNPYAATGRDAAITFLEKFVADNPGQKTTIHRVIADGNLVAVHSHGWNENGDAAAKR 114
Query: 90 -WVTTDTFREDENGC-IVEHWDVI 111
+ D FR + GC ++EHWDV+
Sbjct: 115 GFAVIDIFRVE--GCRVMEHWDVL 136
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.319 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,038,670,646
Number of Sequences: 5470121
Number of extensions: 47000061
Number of successful extensions: 107361
Number of sequences better than 1.0e-05: 84
Number of HSP's better than 0.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 107014
Number of HSP's gapped (non-prelim): 181
length of query: 254
length of database: 1,894,087,724
effective HSP length: 130
effective length of query: 124
effective length of database: 1,182,971,994
effective search space: 146688527256
effective search space used: 146688527256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 128 (53.9 bits)