| Kingdom |
Category |
Genus/Species |
Count |
|
|
|
26 |
| Archaea |
|
|
4 |
| |
|
|
26 |
| |
Crenarchaeota |
|
2 |
| |
|
Hyperthermus butylicus (hbu) |
1 |
| |
|
Sulfolobus tokodaii (sto) |
1 |
| |
Euryarchaeota |
|
2 |
| |
|
Methanospirillum hungatei (mhu) |
1 |
| |
|
Uncultured methanogenic archaeon RC-I (rci) |
1 |
| Bacteria |
|
|
6764 |
| |
Acidobacteria |
|
4 |
| |
|
Solibacter usitatus (sus) |
4 |
| |
Actinobacteria |
|
29 |
| |
|
Arthrobacter aurescens (aau) |
2 |
| |
|
Acidothermus cellulolyticus (ace) |
1 |
| |
|
Arthrobacter sp. FB24 (art) |
2 |
| |
|
Clavibacter michiganensis subsp. sepedonicus (cms) |
1 |
| |
|
Frankia alni (fal) |
4 |
| |
|
Frankia sp. EAN1pec (fre) |
1 |
| |
|
Kocuria rhizophila (krh) |
1 |
| |
|
Mycobacterium abscessus ATCC 19977T (mab) |
2 |
| |
|
Mycobacterium bovis BCG Pasteur 1173P2 (mbb) |
1 |
| |
|
Mycobacterium gilvum (mgi) |
2 |
| |
|
Mycobacterium sp. KMS (mkm) |
1 |
| |
|
Mycobacterium marinum M (mmi) |
2 |
| |
|
Mycobacterium avium paratuberculosis (mpa) |
1 |
| |
|
Nocardia farcinica (nfa) |
1 |
| |
|
Rubrobacter xylanophilus (rxy) |
1 |
| |
|
Salinispora arenicola (saq) |
1 |
| |
|
Saccharopolyspora erythraea (sen) |
2 |
| |
|
Streptomyces avermitilis (sma) |
2 |
| |
|
Salinispora tropica (stp) |
1 |
| |
Bacteroides |
|
2 |
| |
|
Bacteroides fragilis NCTC9343 (bfs) |
1 |
| |
|
Flavobacterium johnsoniae (fjo) |
1 |
| |
Cyanobacteria |
|
4 |
| |
|
Acaryochloris marina (amr) |
2 |
| |
|
Microcystis aeruginosa (mar) |
1 |
| |
|
Synechococcus sp. PCC7002 (syp) |
1 |
| |
Deinococcus-Thermus |
|
3 |
| |
|
Deinococcus geothermalis (dge) |
2 |
| |
|
Thermus thermophilus HB8 (ttj) |
1 |
| |
Firmicutes |
|
15 |
| |
|
Alkaliphilus metalliredigens (amt) |
1 |
| |
|
Bacillus cereus ATCC 14579 (bce) |
1 |
| |
|
Bacillus licheniformis DSM13 (bld) |
1 |
| |
|
Clostridium beijerinckii (cbe) |
1 |
| |
|
Clostridium difficile (cdf) |
1 |
| |
|
Desulfitobacterium hafniense (dsy) |
2 |
| |
|
Heliobacterium modesticaldum (hmo) |
1 |
| |
|
Lysinibacillus sphaericus (lsp) |
1 |
| |
|
Moorella thermoacetica (mta) |
2 |
| |
|
Natranaerobius thermophilus (nth) |
1 |
| |
|
Staphylococcus aureus Newman (sae) |
1 |
| |
|
Streptococcus pneumoniae Hungary19A 6 (spv) |
1 |
| |
|
Symbiobacterium thermophilum (sth) |
1 |
| |
Green nonsulfur bacteria |
|
1 |
| |
|
Roseiflexus sp. RS-1 (rrs) |
1 |
| |
Green sulfur bacteria |
|
1 |
| |
|
Prosthecochloris aestuarii (paa) |
1 |
| |
Hyperthermophilic bacteria |
|
2 |
| |
|
Petrotoga mobilis (pmo) |
1 |
| |
|
Thermodesulfovibrio yellowstonii (tye) |
1 |
| |
Proteobacteria |
|
6697 |
| |
|
Acidovorax avenae (aav) |
1 |
| |
|
Acinetobacter baumannii SDF (abm) |
1 |
| |
|
Acinetobacter baumannii AYE (aby) |
2 |
| |
|
Acinetobacter sp. ADP1 (aci) |
1 |
| |
|
Anaeromyxobacter dehalogenans (ade) |
6 |
| |
|
Acidithiobacillus ferrooxidans (afe) |
4 |
| |
|
Anaeromyxobacter sp. Fw109-5 (afw) |
3 |
| |
|
Aeromonas hydrophila (aha) |
4 |
| |
|
Aeromonas salmonicida (asa) |
1 |
| |
|
Agrobacterium tumefaciens C58 (Cereon) (atc) |
2 |
| |
|
Agrobacterium tumefaciens C58 (UWash/Dupont) (atu) |
1 |
| |
|
Azoarcus sp. BH72 (azo) |
3 |
| |
|
Burkholderia cepacia (bam) |
4812 |
| |
|
Bordetella avium (bav) |
2 |
| |
|
Bordetella bronchiseptica (bbr) |
1 |
| |
|
Bradyrhizobium sp. BTAi1 (bbt) |
3 |
| |
|
Burkholderia cenocepacia HI2424 (bch) |
125 |
| |
|
Burkholderia cenocepacia J2315 (bcj) |
183 |
| |
|
Burkholderia cenocepacia MC0-3 (bcm) |
209 |
| |
|
Burkholderia cenocepacia AU1054 (bcn) |
12 |
| |
|
Brucella canis (bcs) |
1 |
| |
|
Beijerinckia indica (bid) |
5 |
| |
|
Bradyrhizobium japonicum (bja) |
1 |
| |
|
Burkholderia mallei ATCC 23344 (bma) |
4 |
| |
|
Burkholderia multivorans ATCC 17616 (Tohoku) (bmj) |
124 |
| |
|
Burkholderia mallei NCTC 10229 (bml) |
1 |
| |
|
Burkholderia mallei NCTC 10247 (bmn) |
11 |
| |
|
Burkholderia multivorans ATCC 17616 (JGI) (bmu) |
24 |
| |
|
Burkholderia mallei SAVP1 (bmv) |
1 |
| |
|
Burkholderia pseudomallei 668 (bpd) |
44 |
| |
|
Bordetella pertussis (bpe) |
1 |
| |
|
Burkholderia phymatum (bph) |
33 |
| |
|
Burkholderia pseudomallei 1106a (bpl) |
14 |
| |
|
Burkholderia pseudomallei 1710b (bpm) |
76 |
| |
|
Burkholderia pseudomallei K96243 (bps) |
25 |
| |
|
Bordetella petrii (bpt) |
6 |
| |
|
Burkholderia phytofirmans (bpy) |
41 |
| |
|
Burkholderia thailandensis (bte) |
89 |
| |
|
Burkholderia sp. 383 (bur) |
191 |
| |
|
Burkholderia vietnamiensis (bvi) |
207 |
| |
|
Burkholderia xenovorans (bxe) |
56 |
| |
|
Caulobacter crescentus (ccr) |
2 |
| |
|
Cellvibrio japonicus (cja) |
1 |
| |
|
Chromohalobacter salexigens (csa) |
2 |
| |
|
Cupriavidus taiwanensis (cti) |
15 |
| |
|
Chromobacterium violaceum (cvi) |
10 |
| |
|
Delftia acidovorans (dac) |
7 |
| |
|
Dechloromonas aromatica (dar) |
4 |
| |
|
Candidatus Desulfococcus oleovorans (dol) |
1 |
| |
|
Desulfotalea psychrophila (dps) |
2 |
| |
|
Desulfovibrio vulgaris DP4 (dvl) |
1 |
| |
|
Azoarcus sp. EbN1 (eba) |
3 |
| |
|
Escherichia coli CFT073 (UPEC) (ecc) |
4 |
| |
|
Escherichia coli K-12 DH10B (ecd) |
1 |
| |
|
Escherichia coli UTI89 (UPEC) (eci) |
1 |
| |
|
Escherichia coli K-12 W3110 (ecj) |
1 |
| |
|
Escherichia coli SECEC (ecm) |
1 |
| |
|
Escherichia coli 536 (UPEC) (ecp) |
1 |
| |
|
Escherichia coli E24377A (ecw) |
1 |
| |
|
Enterobacter sp. 638 (ent) |
1 |
| |
|
Enterobacter sakazakii (esa) |
2 |
| |
|
Erwinia tasmaniensis (eta) |
2 |
| |
|
Francisella philomiragia (fph) |
1 |
| |
|
Granulobacter bethesdensis (gbe) |
2 |
| |
|
Geobacter bemidjiensis (gbm) |
1 |
| |
|
Gluconacetobacter diazotrophicus (gdi) |
2 |
| |
|
Geobacter lovleyi (glo) |
1 |
| |
|
Geobacter metallireducens (gme) |
1 |
| |
|
Geobacter sulfurreducens (gsu) |
2 |
| |
|
Hahella chejuensis (hch) |
11 |
| |
|
Halorhodospira halophila (hha) |
2 |
| |
|
Jannaschia sp. CCS1 (jan) |
1 |
| |
|
Klebsiella pneumoniae (kpn) |
1 |
| |
|
Leptothrix cholodnii (lch) |
1 |
| |
|
Magnetospirillum magneticum (mag) |
1 |
| |
|
Methylococcus capsulatus (mca) |
2 |
| |
|
Mesorhizobium sp. BNC1 (mes) |
2 |
| |
|
Methylobacterium sp. 4-46 (met) |
3 |
| |
|
Methylobacterium extorquens (mex) |
1 |
| |
|
Magnetococcus sp. MC-1 (mgm) |
1 |
| |
|
Mesorhizobium loti (mlo) |
5 |
| |
|
Minibacterium massiliensis (mms) |
4 |
| |
|
Marinomonas sp. MWYL1 (mmw) |
2 |
| |
|
Methylobacterium populi (mpo) |
1 |
| |
|
Methylibium petroleiphilum (mpt) |
2 |
| |
|
Methylobacterium radiotolerans (mrd) |
2 |
| |
|
Myxococcus xanthus (mxa) |
4 |
| |
|
Nitrobacter hamburgensis (nha) |
1 |
| |
|
Neisseria meningitidis FAM18 (serogroup C) (nmc) |
1 |
| |
|
Neisseria meningitidis MC58 (serogroup B) (nme) |
1 |
| |
|
Ochrobactrum anthropi (oan) |
1 |
| |
|
Pseudomonas aeruginosa PAO1 (pae) |
1 |
| |
|
Pseudomonas aeruginosa PA7 (pap) |
10 |
| |
|
Pseudomonas aeruginosa UCBPP-PA14 (pau) |
4 |
| |
|
Pelobacter carbinolicus (pca) |
1 |
| |
|
Paracoccus denitrificans (pde) |
2 |
| |
|
Pseudomonas entomophila (pen) |
1 |
| |
|
Pseudomonas fluorescens Pf-5 (pfl) |
13 |
| |
|
Pseudomonas fluorescens Pf0-1 (pfo) |
4 |
| |
|
Parvibaculum lavamentivorans (pla) |
1 |
| |
|
Photorhabdus luminescens (plu) |
21 |
| |
|
Pseudomonas mendocina (pmy) |
4 |
| |
|
Polaromonas naphthalenivorans (pna) |
2 |
| |
|
Polynucleobacter sp. QLW-P1DMWA-1 (pnu) |
1 |
| |
|
Polaromonas sp. JS666 (pol) |
3 |
| |
|
Pseudomonas putida F1 (ppf) |
2 |
| |
|
Pseudomonas putida GB-1 (ppg) |
5 |
| |
|
Pseudomonas putida KT2440 (ppu) |
2 |
| |
|
Pseudomonas putida W619 (ppw) |
2 |
| |
|
Psychrobacter sp. PRwf-1 (prw) |
1 |
| |
|
Pseudomonas stutzeri (psa) |
7 |
| |
|
Pseudomonas syringae pv. syringae B728a (psb) |
3 |
| |
|
Pseudomonas syringae pv. phaseolicola 1448A (psp) |
3 |
| |
|
Pseudomonas syringae pv. tomato DC3000 (pst) |
3 |
| |
|
Roseobacter denitrificans (rde) |
1 |
| |
|
Rhizobium etli CIAT 652 (rec) |
2 |
| |
|
Ralstonia eutropha H16 (reh) |
10 |
| |
|
Ralstonia eutropha JMP134 (reu) |
18 |
| |
|
Rhizobium leguminosarum (rle) |
5 |
| |
|
Ralstonia metallidurans (rme) |
19 |
| |
|
Rhodopseudomonas palustris HaA2 (rpb) |
1 |
| |
|
Ralstonia pickettii (rpi) |
7 |
| |
|
Rhodospirillum rubrum (rru) |
1 |
| |
|
Ralstonia solanacearum (rso) |
18 |
| |
|
Sphingopyxis alaskensis (sal) |
2 |
| |
|
Sorangium cellulosum (scl) |
6 |
| |
|
Shewanella denitrificans (sdn) |
4 |
| |
|
Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601 (sek) |
1 |
| |
|
Salmonella enterica subsp. enterica serovar Schwarzengrund (sew) |
1 |
| |
|
Shewanella frigidimarina (sfr) |
1 |
| |
|
Sodalis glossinidius (sgl) |
1 |
| |
|
Shewanella sp. ANA-3 (shn) |
1 |
| |
|
Silicibacter pomeroyi (sil) |
3 |
| |
|
Silicibacter sp. TM1040 (sit) |
1 |
| |
|
Sinorhizobium medicae (smd) |
1 |
| |
|
Sinorhizobium meliloti (sme) |
3 |
| |
|
Stenotrophomonas maltophilia (sml) |
1 |
| |
|
Stenotrophomonas maltophilia R551-3 (smt) |
1 |
| |
|
Serratia proteamaculans (spe) |
4 |
| |
|
Shewanella sediminis (sse) |
1 |
| |
|
Salmonella enterica subsp. enterica serovar Typhi CT18 (sty) |
1 |
| |
|
Sphingomonas wittichii (swi) |
1 |
| |
|
Thiobacillus denitrificans (tbd) |
1 |
| |
|
Vibrio cholerae O395 (vco) |
1 |
| |
|
Verminephrobacter eiseniae (vei) |
7 |
| |
|
Vibrio harveyi (vha) |
2 |
| |
|
Wolinella succinogenes (wsu) |
1 |
| |
|
Xanthomonas axonopodis (xac) |
5 |
| |
|
Xanthomonas campestris pv. campestris B100 (xca) |
1 |
| |
|
Xanthomonas campestris pv. vesicatoria (xcv) |
1 |
| |
|
Xylella fastidiosa M12 (xfm) |
2 |
| |
|
Xanthomonas oryzae MAFF311018 (xom) |
1 |
| |
|
Xanthomonas oryzae KACC10331 (xoo) |
1 |
| |
|
Xanthomonas oryzae PXO99A (xop) |
1 |
| |
|
Yersinia enterocolitica (yen) |
1 |
| |
|
Yersinia pseudotuberculosis PB1/+ (ypb) |
1 |
| |
|
Yersinia pseudotuberculosis YPIII (ypy) |
4 |
| |
|
Zymomonas mobilis (zmo) |
1 |
| |
Spirochete |
|
2 |
| |
|
Leptospira borgpetersenii L550 (lbl) |
2 |
| |
Verrucomicrobia |
|
4 |
| |
|
Methylacidiphilum infernorum (min) |
1 |
| |
|
Opitutus terrae (ote) |
3 |
| Eukaryotes |
|
|
34 |
| |
Animals |
|
21 |
| |
|
Brugia malayi (filaria) (bmy) |
1 |
| |
|
Bos taurus (cow) (bta) |
2 |
| |
|
Caenorhabditis briggsae (cbr) |
2 |
| |
|
Caenorhabditis elegans (nematode) (cel) |
1 |
| |
|
Canis familiaris (dog) (cfa) |
1 |
| |
|
Drosophila grimshawi (dgr) |
1 |
| |
|
Drosophila mojavensis (dmo) |
2 |
| |
|
Drosophila pseudoobscura (dpo) |
4 |
| |
|
Danio rerio (zebrafish) (dre) |
1 |
| |
|
Drosophila sechellia (dse) |
1 |
| |
|
Drosophila willistoni (dwi) |
1 |
| |
|
Mus musculus (mouse) (mmu) |
3 |
| |
|
Strongylocentrotus purpuratus (purple sea urchin) (spu) |
1 |
| |
Fungi |
|
4 |
| |
|
Aspergillus fumigatus (afm) |
1 |
| |
|
Aspergillus oryzae (aor) |
1 |
| |
|
Candida glabrata (cgr) |
1 |
| |
|
Saccharomyces cerevisiae (sce) |
1 |
| |
Plants |
|
2 |
| |
|
Oryza sativa japonica (Japanese rice) (osa) |
2 |
| |
Protists |
|
7 |
| |
|
Dictyostelium discoideum (ddi) |
1 |
| |
|
Leishmania major (lma) |
3 |
| |
|
Monosiga brevicollis (mbr) |
1 |
| |
|
Trichomonas vaginalis (tva) |
2 |
| NULL |
|
|
257 |
| TOTAL |
|
|
7085 |
![[space]](http://compbio.ornl.gov/public/images/bluespacer.gif){kind=small}
![[space]](http://maple.lsd.ornl.gov/common/images/bluespacer.gif){kind=small}