BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SMu1312
(232 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24379840|ref|NP_721795.1| putative Zn-dependent protease... 407 e-112
gi|55821194|ref|YP_139636.1| proteinase [Streptococcus ther... 233 7e-60
gi|76787999|ref|YP_329884.1| hypothetical protein SAK_1271 ... 214 4e-54
gi|77407832|ref|ZP_00784585.1| conserved hypothetical prote... 213 9e-54
gi|22537342|ref|NP_688193.1| hypothetical protein SAG1184 [... 212 1e-53
gi|77412232|ref|ZP_00788550.1| conserved hypothetical prote... 212 2e-53
gi|25011306|ref|NP_735701.1| hypothetical protein gbs1257 [... 212 2e-53
gi|77412800|ref|ZP_00789005.1| Unknown [Streptococcus agala... 210 4e-53
gi|76798512|ref|ZP_00780747.1| conserved hypothetical prote... 205 1e-51
gi|81096827|ref|ZP_00875156.1| Peptidase M10A and M12B, mat... 179 1e-43
gi|146319132|ref|YP_001198844.1| Predicted Zn-dependent pro... 177 4e-43
gi|157075320|gb|ABV10003.1| conserved hypothetical protein ... 171 3e-41
gi|125717642|ref|YP_001034775.1| Zn-dependent protease, put... 170 5e-41
gi|149021577|ref|ZP_01835632.1| fructose-bisphosphate aldol... 166 9e-40
gi|148983997|ref|ZP_01817316.1| fructose-bisphosphate aldol... 165 2e-39
gi|148988982|ref|ZP_01820382.1| fructose-bisphosphate aldol... 164 3e-39
gi|15900525|ref|NP_345129.1| hypothetical protein SP_0617 [... 164 4e-39
gi|148998290|ref|ZP_01825759.1| fructose-bisphosphate aldol... 164 5e-39
gi|111657552|ref|ZP_01408292.1| hypothetical protein SpneT_... 164 5e-39
gi|149005727|ref|ZP_01829466.1| fructose-bisphosphate aldol... 164 5e-39
gi|149002297|ref|ZP_01827239.1| fructose-bisphosphate aldol... 162 1e-38
gi|15902586|ref|NP_358136.1| hypothetical protein spr0542 [... 162 1e-38
gi|77405913|ref|ZP_00782994.1| conserved hypothetical prote... 142 1e-32
gi|148543416|ref|YP_001270786.1| peptidase M10A and M12B, m... 137 7e-31
gi|92089044|ref|ZP_01273998.1| Peptidase M10A and M12B, mat... 134 3e-30
gi|90961058|ref|YP_534974.1| Putative Zn-dependent protease... 133 7e-30
gi|148543664|ref|YP_001271034.1| peptidase M10A and M12B, m... 133 8e-30
gi|62422056|gb|AAX82610.1| putative metalloproteinase [Lact... 132 2e-29
gi|92089729|ref|ZP_01274661.1| Peptidase M10A and M12B, mat... 131 3e-29
gi|42519710|ref|NP_965640.1| hypothetical protein LJ0615 [L... 124 4e-27
gi|116630237|ref|YP_815409.1| Predicted Zn-dependent protea... 122 2e-26
gi|116514731|ref|YP_813637.1| Predicted Zn-dependent protea... 102 3e-20
gi|58337935|ref|YP_194520.1| conserved domain [Lactobacillu... 100 6e-20
gi|104774607|ref|YP_619587.1| hypothetical protein Ldb1920 ... 99 3e-19
gi|116333455|ref|YP_794982.1| Predicted Zn-dependent protea... 69 2e-10
gi|28377269|ref|NP_784161.1| extracellular zinc metalloprot... 65 3e-09
gi|58337662|ref|YP_194247.1| hypothetical protein LBA1391 [... 59 2e-07
gi|28379467|ref|NP_786359.1| extracellular zinc metalloprot... 55 5e-06
>gi|24379840|ref|NP_721795.1| putative Zn-dependent protease [Streptococcus mutans UA159]
gi|24377811|gb|AAN59101.1|AE014976_9 putative Zn-dependent protease [Streptococcus mutans UA159]
Length = 232
Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats.
Identities = 232/232 (100%), Positives = 232/232 (100%)
Query: 1 MKTFIKILFFIPRLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTISEQWNKITT 60
MKTFIKILFFIPRLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTISEQWNKITT
Sbjct: 1 MKTFIKILFFIPRLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTISEQWNKITT 60
Query: 61 FFSNDFSLPDTMSKLSTDNYKHEAGSRWSQNSASVYIASTDKTIVKAYQTALANWNATGS 120
FFSNDFSLPDTMSKLSTDNYKHEAGSRWSQNSASVYIASTDKTIVKAYQTALANWNATGS
Sbjct: 61 FFSNDFSLPDTMSKLSTDNYKHEAGSRWSQNSASVYIASTDKTIVKAYQTALANWNATGS 120
Query: 121 FTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDASYGY 180
FTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDASYGY
Sbjct: 121 FTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDASYGY 180
Query: 181 SFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLYAN 232
SFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLYAN
Sbjct: 181 SFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLYAN 232
>gi|55821194|ref|YP_139636.1| proteinase [Streptococcus thermophilus LMG 18311]
gi|55823104|ref|YP_141545.1| proteinase [Streptococcus thermophilus CNRZ1066]
gi|116627919|ref|YP_820538.1| Predicted Zn-dependent protease [Streptococcus thermophilus LMD-9]
gi|55737179|gb|AAV60821.1| proteinase [Streptococcus thermophilus LMG 18311]
gi|55739089|gb|AAV62730.1| proteinase [Streptococcus thermophilus CNRZ1066]
gi|116101196|gb|ABJ66342.1| Predicted Zn-dependent protease [Streptococcus thermophilus LMD-9]
Length = 239
Score = 233 bits (594), Expect = 7e-60, Method: Composition-based stats.
Identities = 126/239 (52%), Positives = 173/239 (72%), Gaps = 7/239 (2%)
Query: 1 MKTFIKILFFIPRL----IWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTISEQWN 56
MK ++++F+IP+L IWN+IW+I K +ILA + + +Y+ NN + L + I+ +
Sbjct: 1 MKKLLRVIFYIPKLLLRFIWNLIWAIFKLALILAIVGYGLIYYANNSSSTLATNINRAFR 60
Query: 57 KITTFFS--NDFSLPDTMSKLST-DNYKHEAGSRWSQNSASVYIASTDKTIVKAYQTALA 113
++ FS N + +S LST D G+RW+QN+AS+YI STD+T+V AY+ A+
Sbjct: 61 QVELGFSGTNTSDVEKVVSNLSTTDTIPESNGARWAQNTASIYIQSTDETLVAAYKEAIT 120
Query: 114 NWNATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYL 173
NWN TG+F F + D ++ADI A DYSD NSQAAGLA+++TN +TNR++HVDVKLNRY+L
Sbjct: 121 NWNKTGAFIFTLTDDASTADIVATDYSDANSQAAGLADSQTNVLTNRITHVDVKLNRYFL 180
Query: 174 LDASYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLYAN 232
L++ +GY+ RIV+TAEHELGHAIGLDHDD +TSVM S+GSY GIQ VDI V LYAN
Sbjct: 181 LNSDFGYTHKRIVNTAEHELGHAIGLDHDDSKTSVMQSAGSYYGIQQVDIDTVHALYAN 239
>gi|76787999|ref|YP_329884.1| hypothetical protein SAK_1271 [Streptococcus agalactiae A909]
gi|76563056|gb|ABA45640.1| conserved hypothetical protein [Streptococcus agalactiae A909]
Length = 236
Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats.
Identities = 115/237 (48%), Positives = 164/237 (69%), Gaps = 7/237 (2%)
Query: 1 MKTFIKILFFIP----RLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTISEQWN 56
M+T +++F IP RLIWNIIW I KT++++A I+F Y+ N+ +++ + +S+
Sbjct: 1 MRTLFRMIFAIPKFIFRLIWNIIWGIFKTVLVIAIILFGLYYYANHSQSEFANQLSDIIQ 60
Query: 57 KITTF--FSNDFSLPDTMSKLSTDNYKHEAGSRWSQNSASVYIASTDKTIVKAYQTALAN 114
TF F++ L ++ + L+TDN H +RW +N A++YIA+ D +V AY+ A++N
Sbjct: 61 TGKTFLNFADTNQLKNSFANLATDNVHHSENTRWDKNQATIYIATRDSELVSAYEQAISN 120
Query: 115 WNATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLL 174
WNATG+F +D +ADI AKDYSD +QAAG+AETE NA+TNR+S V VKLN +YL
Sbjct: 121 WNATGAFVLQT-TDNPNADIIAKDYSDAKTQAAGVAETEKNALTNRISKVTVKLNTFYLK 179
Query: 175 DASYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLYA 231
+ +GY RIV+TAEHELGHA+GL H+D++ SVM S GS+ GIQ VDI +K LYA
Sbjct: 180 NKQFGYDHTRIVNTAEHELGHALGLGHNDQQHSVMQSKGSHYGIQEVDIQTLKNLYA 236
>gi|77407832|ref|ZP_00784585.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
gi|77173579|gb|EAO76695.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
Length = 236
Score = 213 bits (541), Expect = 9e-54, Method: Composition-based stats.
Identities = 114/237 (48%), Positives = 163/237 (68%), Gaps = 7/237 (2%)
Query: 1 MKTFIKILFFIP----RLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTISEQWN 56
M+T +++F IP RLIWNIIW I KT++++A I+F Y+ N+ +++ + +S+
Sbjct: 1 MRTLFRMIFAIPKFIFRLIWNIIWGIFKTVLVIAIILFGLYYYANHSQSEFANQLSDIIQ 60
Query: 57 KITTF--FSNDFSLPDTMSKLSTDNYKHEAGSRWSQNSASVYIASTDKTIVKAYQTALAN 114
TF F++ L ++ + L+TDN H +RW +N A++YIA+ D + AY+ A++N
Sbjct: 61 TGKTFLNFADTNQLKNSFANLATDNVHHSENTRWDKNQATIYIATRDSELASAYKQAISN 120
Query: 115 WNATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLL 174
WNATG+F +D +ADI AKDYSD +QAAG+AETE NA+TNR+S V VKLN +YL
Sbjct: 121 WNATGAFVLQT-TDNPNADIIAKDYSDAKTQAAGVAETERNALTNRISKVTVKLNTFYLR 179
Query: 175 DASYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLYA 231
+ +GY RIV+TAEHELGHA+GL H+D++ SVM S GS+ GIQ VDI +K LYA
Sbjct: 180 NKQFGYDHTRIVNTAEHELGHALGLGHNDQQHSVMQSKGSHYGIQEVDIQTLKNLYA 236
>gi|22537342|ref|NP_688193.1| hypothetical protein SAG1184 [Streptococcus agalactiae 2603V/R]
gi|22534214|gb|AAN00066.1|AE014246_1 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
Length = 236
Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats.
Identities = 114/237 (48%), Positives = 164/237 (69%), Gaps = 7/237 (2%)
Query: 1 MKTFIKILFFIP----RLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTISEQWN 56
M+T +++F IP RLIWNIIW I KT++++A I+F Y+ N+ +++ + +S+
Sbjct: 1 MRTLFRMIFAIPKFIFRLIWNIIWGIFKTVLVIAIILFGLYYYANHSQSEFANQLSDIIQ 60
Query: 57 KITTF--FSNDFSLPDTMSKLSTDNYKHEAGSRWSQNSASVYIASTDKTIVKAYQTALAN 114
TF F++ L ++ + L+TDN H +RW +N A++YIA+ D +V AY+ A++N
Sbjct: 61 TGKTFLNFADTNQLKNSFTNLATDNVHHSENTRWDKNQATIYIATRDSELVSAYKQAISN 120
Query: 115 WNATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLL 174
WNATG+F +D +ADI AKDYSD +QAAG+AETE NA+TNR+S V V+LN +YL
Sbjct: 121 WNATGAFVLQT-TDNPNADIIAKDYSDAKTQAAGVAETEKNALTNRISKVTVELNTFYLK 179
Query: 175 DASYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLYA 231
+ +GY RIV+TAEHELGHA+GL H+D++ SVM S GS+ GIQ VDI +K LYA
Sbjct: 180 NKQFGYDHTRIVNTAEHELGHALGLGHNDQQHSVMQSKGSHYGIQEVDIQTLKNLYA 236
>gi|77412232|ref|ZP_00788550.1| conserved hypothetical protein [Streptococcus agalactiae CJB111]
gi|77161701|gb|EAO72694.1| conserved hypothetical protein [Streptococcus agalactiae CJB111]
Length = 236
Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats.
Identities = 113/237 (47%), Positives = 163/237 (68%), Gaps = 7/237 (2%)
Query: 1 MKTFIKILFFIP----RLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTISEQWN 56
M+T +++F IP RL+WNIIW I KT++++A I+F Y+ N+ +++ + +S+
Sbjct: 1 MRTLFRMIFAIPKFIFRLVWNIIWGIFKTVLVIAIILFGLYYYANHSQSEFANQLSDIIQ 60
Query: 57 KITTF--FSNDFSLPDTMSKLSTDNYKHEAGSRWSQNSASVYIASTDKTIVKAYQTALAN 114
TF F++ ++ + L+TDN H +RW +N A++YIA+ D +V AY+ A++N
Sbjct: 61 TGKTFLNFADTNQFKNSFANLATDNVHHSENTRWDKNQATIYIATRDSELVSAYKQAISN 120
Query: 115 WNATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLL 174
WNATG+F +D +ADI AKDYSD +QAAG+AETE NA+TNR+S V VKLN +YL
Sbjct: 121 WNATGAFVLQT-TDNPNADIIAKDYSDAKTQAAGVAETEKNALTNRISKVTVKLNTFYLK 179
Query: 175 DASYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLYA 231
+ +GY RIV+TAEHELGHA+GL H+D++ SVM S GS+ GIQ VDI +K LYA
Sbjct: 180 NKQFGYDHTRIVNTAEHELGHALGLGHNDQQHSVMQSKGSHYGIQEVDIQTLKNLYA 236
>gi|25011306|ref|NP_735701.1| hypothetical protein gbs1257 [Streptococcus agalactiae NEM316]
gi|23095730|emb|CAD46916.1| Unknown [Streptococcus agalactiae NEM316]
Length = 236
Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats.
Identities = 114/237 (48%), Positives = 164/237 (69%), Gaps = 7/237 (2%)
Query: 1 MKTFIKILFFIP----RLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTISEQWN 56
M+T +++F IP RLIWNIIW I KT++++A I+F Y+ N+ +++ + +S+
Sbjct: 1 MRTLFRMIFAIPKFIFRLIWNIIWGIFKTVLVIAIILFGLYYYANHSQSEFANQLSDIIQ 60
Query: 57 KITTF--FSNDFSLPDTMSKLSTDNYKHEAGSRWSQNSASVYIASTDKTIVKAYQTALAN 114
TF F++ L ++ + L+TD+ H +RW +N A++YIA+ D +V AY+ A++N
Sbjct: 61 TGKTFLNFADTNQLKNSFTNLATDSVHHSENTRWDKNQATIYIATRDSELVSAYKQAISN 120
Query: 115 WNATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLL 174
WNATG+F +D +ADI AKDYSD +QAAG+AETE NA+TNR+S V VKLN +YL
Sbjct: 121 WNATGAFVLQT-TDNPNADIIAKDYSDAKTQAAGVAETEKNALTNRISKVTVKLNTFYLK 179
Query: 175 DASYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLYA 231
+ +GY RIV+TAEHELGHA+GL H+D++ SVM S GS+ GIQ VDI +K LYA
Sbjct: 180 NKQFGYDHTRIVNTAEHELGHALGLGHNDQQHSVMQSKGSHYGIQEVDIQTLKNLYA 236
>gi|77412800|ref|ZP_00789005.1| Unknown [Streptococcus agalactiae 515]
gi|77161096|gb|EAO72202.1| Unknown [Streptococcus agalactiae 515]
Length = 236
Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats.
Identities = 113/237 (47%), Positives = 163/237 (68%), Gaps = 7/237 (2%)
Query: 1 MKTFIKILFFIP----RLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTISEQWN 56
M+T +++F IP RLIWNIIW I KT++++A I+F Y+ N+ +++ + +S+
Sbjct: 1 MRTLFRMIFAIPKFIFRLIWNIIWGIFKTVLVIAIILFGLYYYANHSQSEFANQLSDIIQ 60
Query: 57 KITTF--FSNDFSLPDTMSKLSTDNYKHEAGSRWSQNSASVYIASTDKTIVKAYQTALAN 114
TF F++ L ++ + L+TD+ H +RW +N A++YIA+ D +V AY+ A++N
Sbjct: 61 TGKTFLNFADTNQLKNSFTNLATDSVHHSENTRWDKNQATIYIATRDSELVSAYKQAISN 120
Query: 115 WNATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLL 174
WNATG+F +D +ADI AKDYSD +QAAG+AETE NA+TNR+S V VKLN +YL
Sbjct: 121 WNATGAFVLQT-TDNPNADIIAKDYSDAKTQAAGVAETEKNALTNRISKVTVKLNTFYLK 179
Query: 175 DASYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLYA 231
+ +GY RIV+T EHELGHA+GL H+D++ SVM S GS+ GIQ VDI +K LYA
Sbjct: 180 NKQFGYDHTRIVNTVEHELGHALGLGHNDQQHSVMQSKGSHYGIQEVDIQTLKNLYA 236
>gi|76798512|ref|ZP_00780747.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
gi|76586141|gb|EAO62664.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
Length = 240
Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats.
Identities = 112/236 (47%), Positives = 163/236 (69%), Gaps = 8/236 (3%)
Query: 1 MKTFIKILFFIP----RLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTISEQWN 56
M+T +++F IP RLIWNIIW I KT++++A I+F Y+ N+ +++ + +S+
Sbjct: 1 MRTLFRMIFAIPKFIFRLIWNIIWGIFKTVLVIAIILFGLYYYANHSQSEFANQLSDIIQ 60
Query: 57 KITTF--FSNDFSLPDTMSKLSTDNYKHEAGSRWSQNSASVYIASTDKTIVKAYQTALAN 114
TF F++ L ++ + L+TD+ H +RW +N A++YIA+ D +V AY+ A++N
Sbjct: 61 TGKTFLNFADTNQLKNSFTNLATDSVHHSENTRWDKNQATIYIATRDSELVSAYKQAISN 120
Query: 115 WNATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLL 174
WNATG+F +D +ADI AKDYSD +QAAG+AETE NA+TNR+S V VKLN +YL
Sbjct: 121 WNATGAFVLQT-TDNPNADIIAKDYSDAKTQAAGVAETEKNALTNRISKVTVKLNTFYLK 179
Query: 175 DASYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGI-QTVDITAVKKL 229
+ +GY RIV+TAEHELGHA+GL H+D++ SVM S GS+ GI + VDI +KKL
Sbjct: 180 NKQFGYDHTRIVNTAEHELGHALGLGHNDQQHSVMQSKGSHYGISRKVDIQTLKKL 235
>gi|81096827|ref|ZP_00875156.1| Peptidase M10A and M12B, matrixin and adamalysin [Streptococcus
suis 89/1591]
gi|80977131|gb|EAP40685.1| Peptidase M10A and M12B, matrixin and adamalysin [Streptococcus
suis 89/1591]
Length = 231
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 104/234 (44%), Positives = 147/234 (62%), Gaps = 7/234 (2%)
Query: 1 MKTFIKILFFIPRLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTISEQWNKITT 60
MK IL +I R W +IW ++++LA + YF + T++++ ++
Sbjct: 1 MKLIGNILRWIWRTFWGLIWL---SMMLLACGLGLLFYFQQEAAPQMLQTLAQEV-QLMV 56
Query: 61 FFSNDFSLPD---TMSKLSTDNYKHEAGSRWSQNSASVYIASTDKTIVKAYQTALANWNA 117
++ ++ + T+ L+TD RW N+A+VYI + + T V AY+TA+ANWNA
Sbjct: 57 KGQSEVTIEEGVNTIKHLTTDTVNTADHGRWESNTATVYIETQNPTFVAAYETAIANWNA 116
Query: 118 TGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDAS 177
TG+FTF + SD ADI A + +D N+QAAG A + TN +TN S V V+LN +YLL+
Sbjct: 117 TGAFTFVMTSDPNQADIIATEMNDGNTQAAGEANSTTNLLTNYYSSVTVRLNSFYLLNDQ 176
Query: 178 YGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLYA 231
YGY DRI+HTAEHELGHAIGLDH+D +TSVM S+GS +GIQ DI AV LY+
Sbjct: 177 YGYDMDRIIHTAEHELGHAIGLDHEDSQTSVMESAGSNHGIQQADIDAVLALYS 230
>gi|146319132|ref|YP_001198844.1| Predicted Zn-dependent protease [Streptococcus suis 05ZYH33]
gi|146321338|ref|YP_001201049.1| Predicted Zn-dependent protease [Streptococcus suis 98HAH33]
gi|145689938|gb|ABP90444.1| Predicted Zn-dependent protease [Streptococcus suis 05ZYH33]
gi|145692144|gb|ABP92649.1| Predicted Zn-dependent protease [Streptococcus suis 98HAH33]
Length = 219
Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats.
Identities = 103/231 (44%), Positives = 139/231 (60%), Gaps = 13/231 (5%)
Query: 1 MKTFIKILFFIPRLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTISEQWNKITT 60
MK IL +I R W +IW ++++LA + YF + T+ ++ +
Sbjct: 1 MKLIGNILRWIWRTFWGLIWL---SMVLLACGLGLLFYFQQEAAPQMLQTLPQEVQLMVK 57
Query: 61 FFSNDFSLPDTMSKLSTDNYKHEAGSRWSQNSASVYIASTDKTIVKAYQTALANWNATGS 120
S+++TD RW N+A+VYI + + T V AY+TA+ANWNATG+
Sbjct: 58 ----------GQSEVTTDTVNTADHGRWESNTATVYIETQNPTFVAAYETAIANWNATGA 107
Query: 121 FTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDASYGY 180
FTF + SD ADI A + +D N+QAAG A + TN +TN S V V LN +YLL+ YGY
Sbjct: 108 FTFVMTSDPNQADIIATEMNDGNTQAAGEANSTTNLLTNYYSSVTVCLNSFYLLNDQYGY 167
Query: 181 SFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLYA 231
DRI+HTAEHELGHAIGLDH+D +TSVM S+GS +GIQ DI AV LY+
Sbjct: 168 DMDRIIHTAEHELGHAIGLDHEDSQTSVMESAGSNHGIQQADIDAVLALYS 218
>gi|157075320|gb|ABV10003.1| conserved hypothetical protein [Streptococcus gordonii str. Challis
substr. CH1]
Length = 237
Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats.
Identities = 99/242 (40%), Positives = 147/242 (60%), Gaps = 15/242 (6%)
Query: 1 MKTFIKILFFIPRLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLES---TISEQWNK 57
M+ + + FI R+ W ++W+ I IIL +I LY TN +T L + + N+
Sbjct: 1 MRFLLNLFRFIWRMFWRLVWAGIVAFIILVSI----LYLTNPSQTGLPAIRQAVQTAVNQ 56
Query: 58 ITTFFSNDF-------SLPDTMSKLSTDNYKHEAGSRWSQNSASVYIASTDKTIVKAYQT 110
+ TF ++ + L+ ++ G+RW A+VYI + + T AYQ
Sbjct: 57 LDTFLDQQGIHTGLGQNVQNLGENLTDEHVASSDGARWETARATVYIETENPTFRAAYQE 116
Query: 111 ALANWNATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNR 170
A+ +WNATG+FTF ++ DK+ A+I A + +D AAG AE++TN +T R + V V+LN
Sbjct: 117 AIKSWNATGAFTFQLVEDKSQANIIATEMNDSTITAAGEAESQTNVLTKRFTKVTVRLNA 176
Query: 171 YYLLDASYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLY 230
YYLL++ YGYS +RIV+TA HELGHAIGLDH++ SVM S+GS+ IQ +DI AVK+LY
Sbjct: 177 YYLLNSYYGYSHERIVNTAAHELGHAIGLDHNE-SASVMQSAGSFYSIQPIDIQAVKELY 235
Query: 231 AN 232
+
Sbjct: 236 QD 237
>gi|125717642|ref|YP_001034775.1| Zn-dependent protease, putative [Streptococcus sanguinis SK36]
gi|125497559|gb|ABN44225.1| Zn-dependent protease, putative [Streptococcus sanguinis SK36]
Length = 239
Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats.
Identities = 101/239 (42%), Positives = 145/239 (60%), Gaps = 11/239 (4%)
Query: 1 MKTFIKILFFIPRLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLE---STISEQWNK 57
M K + F+ RLI ++W + + ++ +I YFT + K E + +
Sbjct: 1 MGLIFKSIRFLMRLIGRVVWGLAWSFVLSFMVIVGIFYFTTSTKPGTEGLTQAVQTAVGR 60
Query: 58 ITTFFSND------FSLPDTMSKLSTDNYKHEAGSRWSQNSASVYIASTDKTIVKAYQTA 111
+ F ++ S +T + TD + G+RW Q SA++YI + ++T AY+ A
Sbjct: 61 VDQFLNHQGISTRLHSSEETQTDQLTDEHA-TTGARWDQPSATIYIDTNNETFRSAYKEA 119
Query: 112 LANWNATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRY 171
+ +WN TG+FTF II+DK ADI A + +D N AAG AE++TN +T R +HV V+LN Y
Sbjct: 120 IDSWNQTGAFTFQIINDKDKADIVATEMNDGNVSAAGEAESKTNLLTKRFTHVTVRLNSY 179
Query: 172 YLLDASYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLY 230
YLLD+ Y YS +RIV+TA HELGHAIGLDH+++E SVM S+GS+ IQ DI AVK LY
Sbjct: 180 YLLDSRYAYSHERIVNTAAHELGHAIGLDHNEEE-SVMQSAGSFYSIQPTDIQAVKDLY 237
>gi|149021577|ref|ZP_01835632.1| fructose-bisphosphate aldolase [Streptococcus pneumoniae SP23-BS72]
gi|147930273|gb|EDK81258.1| fructose-bisphosphate aldolase [Streptococcus pneumoniae SP23-BS72]
Length = 233
Score = 166 bits (420), Expect = 9e-40, Method: Composition-based stats.
Identities = 92/227 (40%), Positives = 140/227 (61%), Gaps = 13/227 (5%)
Query: 8 LFFIPRLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTI--SEQWNKITTFFSND 65
FF+ RL W ++W ++ +L + F L++ N D + + +E+ KI +
Sbjct: 12 FFFVWRLFWRLVWIVV----LLCVLAFGLLWYLNG---DFQGALKQAERSVKIGQQSIDQ 64
Query: 66 FSLPDTMSKLS-TDNYKHEAGSRWSQNSASVYI-ASTDKTIVKAYQTALANWNATGSFTF 123
+ + KLS TD+++H G RW+Q SA +Y+ D +AY A+ NWN TG+F F
Sbjct: 65 WEKTGQLPKLSQTDSHQHSEG-RWAQASARIYLDPQMDSRFQEAYLEAIQNWNQTGAFNF 123
Query: 124 NIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDASYGYSFD 183
++++ + ADITA + +D + AG AE++TN +T + V V+LN YYL + YGYS++
Sbjct: 124 ELVTESSKADITATEMNDGGTPVAGEAESQTNLLTGQFLSVTVRLNHYYLSNPYYGYSYE 183
Query: 184 RIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLY 230
R+VHTAEHELGHAIGLDH D E SVM +GS+ GIQ D+ ++K+Y
Sbjct: 184 RLVHTAEHELGHAIGLDHTD-EKSVMQPAGSFYGIQEEDVANLRKIY 229
>gi|148983997|ref|ZP_01817316.1| fructose-bisphosphate aldolase [Streptococcus pneumoniae SP3-BS71]
gi|147924144|gb|EDK75256.1| fructose-bisphosphate aldolase [Streptococcus pneumoniae SP3-BS71]
Length = 233
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 92/227 (40%), Positives = 139/227 (61%), Gaps = 13/227 (5%)
Query: 8 LFFIPRLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTI--SEQWNKITTFFSND 65
FF+ RL W ++W ++ +L + F L++ N D + + +E+ KI +
Sbjct: 12 FFFVWRLFWRLVWIVV----LLCVLAFGLLWYLNG---DFQGALKQAERSVKIGQQSIDQ 64
Query: 66 FSLPDTMSKLS-TDNYKHEAGSRWSQNSASVYI-ASTDKTIVKAYQTALANWNATGSFTF 123
+ + KLS TD+++H G RW Q SA +Y+ D +AY A+ NWN TG+F F
Sbjct: 65 WEKTGQLPKLSQTDSHQHSEG-RWPQASARIYLDPQMDSRFQEAYLEAIQNWNQTGAFNF 123
Query: 124 NIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDASYGYSFD 183
++++ + ADITA + +D + AG AE++TN +T + V V+LN YYL + YGYS++
Sbjct: 124 ELVTESSKADITATEMNDGGTPVAGEAESQTNLLTGQFLSVTVRLNHYYLSNLYYGYSYE 183
Query: 184 RIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLY 230
R+VHTAEHELGHAIGLDH D E SVM +GS+ GIQ D+ ++K+Y
Sbjct: 184 RLVHTAEHELGHAIGLDHTD-EKSVMQPAGSFYGIQEEDVANLRKIY 229
>gi|148988982|ref|ZP_01820382.1| fructose-bisphosphate aldolase [Streptococcus pneumoniae SP6-BS73]
gi|147925479|gb|EDK76556.1| fructose-bisphosphate aldolase [Streptococcus pneumoniae SP6-BS73]
Length = 233
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 89/234 (38%), Positives = 142/234 (60%), Gaps = 9/234 (3%)
Query: 1 MKTFIKILFFIPRLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTI--SEQWNKI 58
M+ +++ +W + W ++ +++L + F FL++ N D + + +E+ KI
Sbjct: 1 MRWLFRLIGAFFSFVWRLFWRLVWIVVLLCVLAFGFLWYLNG---DFQGALKQAERSVKI 57
Query: 59 TTFFSNDFSLPDTMSKLS-TDNYKHEAGSRWSQNSASVYI-ASTDKTIVKAYQTALANWN 116
+ + + KLS TD+++H G RW+Q SA +Y+ D +AY A+ NWN
Sbjct: 58 GQQSIDQWEKTGQLPKLSQTDSHQHSEG-RWAQASARIYLDPQMDSRFQEAYLEAIQNWN 116
Query: 117 ATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDA 176
TG+F F ++++ + DITA + +D + AG AE++TN +T + V V+LN YYL +
Sbjct: 117 QTGAFNFELVTESSKVDITATEMNDGGTPVAGEAESQTNLLTGQFLSVTVRLNHYYLSNP 176
Query: 177 SYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLY 230
YGYS++R+VHTAEHELGHAIGLDH D E SVM +GS+ GIQ D+ ++K+Y
Sbjct: 177 YYGYSYERLVHTAEHELGHAIGLDHTD-EKSVMQPAGSFYGIQEEDVANLRKIY 229
>gi|15900525|ref|NP_345129.1| hypothetical protein SP_0617 [Streptococcus pneumoniae TIGR4]
gi|14972093|gb|AAK74769.1| conserved domain protein [Streptococcus pneumoniae TIGR4]
Length = 240
Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats.
Identities = 89/234 (38%), Positives = 142/234 (60%), Gaps = 9/234 (3%)
Query: 1 MKTFIKILFFIPRLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTI--SEQWNKI 58
M+ +++ +W + W ++ +++L + F L++ N D + + +E+ KI
Sbjct: 8 MRWLFRLIGAFFSFVWRLFWRLVWIVVLLCVLAFGLLWYLNG---DFQGALKQAERSVKI 64
Query: 59 TTFFSNDFSLPDTMSKLS-TDNYKHEAGSRWSQNSASVYI-ASTDKTIVKAYQTALANWN 116
+ + + KLS TD+++H G RW+Q SA +Y+ D +AY A+ NWN
Sbjct: 65 GQQSIDQWEKTGQLPKLSQTDSHQHSEG-RWAQASARIYLDPQMDSRFQEAYLEAIQNWN 123
Query: 117 ATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDA 176
TG+F F ++++ + ADITA + +D + AG AE++TN +T + V V+LN YYL +
Sbjct: 124 QTGAFNFELVTESSKADITATEMNDGGTPVAGEAESQTNLLTGQFLSVTVRLNHYYLSNP 183
Query: 177 SYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLY 230
YGYS++R+VHTAEHELGHAIGLDH D E SVM +GS+ GIQ D+ ++K+Y
Sbjct: 184 YYGYSYERLVHTAEHELGHAIGLDHTD-EKSVMQPAGSFYGIQEEDVANLRKIY 236
>gi|148998290|ref|ZP_01825759.1| fructose-bisphosphate aldolase [Streptococcus pneumoniae SP11-BS70]
gi|147755933|gb|EDK62977.1| fructose-bisphosphate aldolase [Streptococcus pneumoniae SP11-BS70]
Length = 233
Score = 164 bits (414), Expect = 5e-39, Method: Composition-based stats.
Identities = 89/234 (38%), Positives = 142/234 (60%), Gaps = 9/234 (3%)
Query: 1 MKTFIKILFFIPRLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTI--SEQWNKI 58
M+ +++ +W + W ++ +++L + F L++ N D + + +E+ KI
Sbjct: 1 MRWLFRLIGAFFSFVWRLFWRLVWIVVLLCVLAFGLLWYLNG---DFQGALKQAERSVKI 57
Query: 59 TTFFSNDFSLPDTMSKLS-TDNYKHEAGSRWSQNSASVYI-ASTDKTIVKAYQTALANWN 116
+ + + KLS TD+++H G RW+Q SA +Y+ D +AY A+ NWN
Sbjct: 58 GQQSIDQWEKTGQLPKLSQTDSHQHSEG-RWAQASARIYLDPQMDSRFQEAYLEAIQNWN 116
Query: 117 ATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDA 176
TG+F F ++++ + ADITA + +D + AG AE++TN +T + V V+LN YYL +
Sbjct: 117 QTGAFNFELVTESSKADITATEMNDGGTPVAGEAESQTNLLTGQFLSVTVRLNHYYLSNP 176
Query: 177 SYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLY 230
YGYS++R+VHTAEHELGHAIGLDH D E SVM +GS+ GIQ D+ ++K+Y
Sbjct: 177 YYGYSYERLVHTAEHELGHAIGLDHTD-EKSVMQPAGSFYGIQEEDVANLRKIY 229
>gi|111657552|ref|ZP_01408292.1| hypothetical protein SpneT_02001253 [Streptococcus pneumoniae
TIGR4]
gi|148992276|ref|ZP_01821999.1| hypothetical protein CGSSp9BS68_06265 [Streptococcus pneumoniae
SP9-BS68]
gi|149010765|ref|ZP_01832136.1| hypothetical protein CGSSp19BS75_05402 [Streptococcus pneumoniae
SP19-BS75]
gi|147765246|gb|EDK72175.1| hypothetical protein CGSSp19BS75_05402 [Streptococcus pneumoniae
SP19-BS75]
gi|147928902|gb|EDK79914.1| hypothetical protein CGSSp9BS68_06265 [Streptococcus pneumoniae
SP9-BS68]
Length = 233
Score = 164 bits (414), Expect = 5e-39, Method: Composition-based stats.
Identities = 89/234 (38%), Positives = 142/234 (60%), Gaps = 9/234 (3%)
Query: 1 MKTFIKILFFIPRLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTI--SEQWNKI 58
M+ +++ +W + W ++ +++L + F L++ N D + + +E+ KI
Sbjct: 1 MRWLFRLIGAFFSFVWRLFWRLVWIVVLLCVLAFGLLWYLNG---DFQGALKQAERSVKI 57
Query: 59 TTFFSNDFSLPDTMSKLS-TDNYKHEAGSRWSQNSASVYI-ASTDKTIVKAYQTALANWN 116
+ + + KLS TD+++H G RW+Q SA +Y+ D +AY A+ NWN
Sbjct: 58 GQQSIDQWEKTGQLPKLSQTDSHQHSEG-RWAQASARIYLDPQMDSRFQEAYLEAIQNWN 116
Query: 117 ATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDA 176
TG+F F ++++ + ADITA + +D + AG AE++TN +T + V V+LN YYL +
Sbjct: 117 QTGAFNFELVTESSKADITATEMNDGGTPVAGEAESQTNLLTGQFLSVTVRLNHYYLSNP 176
Query: 177 SYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLY 230
YGYS++R+VHTAEHELGHAIGLDH D E SVM +GS+ GIQ D+ ++K+Y
Sbjct: 177 YYGYSYERLVHTAEHELGHAIGLDHTD-EKSVMQPAGSFYGIQEEDVANLRKIY 229
>gi|149005727|ref|ZP_01829466.1| fructose-bisphosphate aldolase [Streptococcus pneumoniae SP18-BS74]
gi|147762667|gb|EDK69627.1| fructose-bisphosphate aldolase [Streptococcus pneumoniae SP18-BS74]
Length = 233
Score = 164 bits (414), Expect = 5e-39, Method: Composition-based stats.
Identities = 89/234 (38%), Positives = 141/234 (60%), Gaps = 9/234 (3%)
Query: 1 MKTFIKILFFIPRLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTI--SEQWNKI 58
M+ +++ +W + W ++ +++L + F L++ N D + + +E+ KI
Sbjct: 1 MRWLFRLIGAFFSFVWRLFWRLVWIVVLLCVLAFGLLWYLNG---DFQGALKQAERSVKI 57
Query: 59 TTFFSNDFSLPDTMSKLS-TDNYKHEAGSRWSQNSASVYI-ASTDKTIVKAYQTALANWN 116
+ + + KLS TD+++H G RW Q SA +Y+ D +AY A+ NWN
Sbjct: 58 GQQSIDQWEKTGQLPKLSQTDSHQHSEG-RWPQASARIYLDPQMDSRFQEAYLEAIQNWN 116
Query: 117 ATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDA 176
TG+F F ++++ + ADITA + +D + AG AE++TN +T + V V+LN YYL +
Sbjct: 117 QTGAFNFELVTESSKADITATEMNDGGTPVAGEAESQTNLLTGQFLSVTVRLNHYYLSNP 176
Query: 177 SYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLY 230
YGYS++R+VHTAEHELGHAIGLDH D E SVM +GS+ GIQ D+ ++K+Y
Sbjct: 177 YYGYSYERLVHTAEHELGHAIGLDHTD-EKSVMQPAGSFYGIQEEDVANLRKIY 229
>gi|149002297|ref|ZP_01827239.1| fructose-bisphosphate aldolase [Streptococcus pneumoniae SP14-BS69]
gi|147759612|gb|EDK66603.1| fructose-bisphosphate aldolase [Streptococcus pneumoniae SP14-BS69]
Length = 233
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 89/234 (38%), Positives = 142/234 (60%), Gaps = 9/234 (3%)
Query: 1 MKTFIKILFFIPRLIWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTI--SEQWNKI 58
M+ +++ +W + W ++ +++L + F L++ N D + + +E+ KI
Sbjct: 1 MRWLFRLIGAFFSFVWRLFWRLVWIVVLLCVLAFGPLWYLNG---DFQGALKQAERSVKI 57
Query: 59 TTFFSNDFSLPDTMSKLS-TDNYKHEAGSRWSQNSASVYI-ASTDKTIVKAYQTALANWN 116
+ + + KLS TD+++H G RW+Q SA +Y+ D +AY A+ NWN
Sbjct: 58 GQQSIDQWEKTGQLPKLSQTDSHQHSEG-RWAQASARIYLDPQMDSRFQEAYLEAIQNWN 116
Query: 117 ATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDA 176
TG+F F ++++ + ADITA + +D + AG AE++TN +T + V V+LN YYL +
Sbjct: 117 QTGAFNFELVTESSKADITATEMNDGGTPVAGEAESQTNLLTGQFLSVTVRLNHYYLSNP 176
Query: 177 SYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLY 230
YGYS++R+VHTAEHELGHAIGLDH D E SVM +GS+ GIQ D+ ++K+Y
Sbjct: 177 YYGYSYERLVHTAEHELGHAIGLDHTD-EKSVMQPAGSFYGIQEEDVANLRKIY 229
>gi|15902586|ref|NP_358136.1| hypothetical protein spr0542 [Streptococcus pneumoniae R6]
gi|116516355|ref|YP_816038.1| matrixin family protein [Streptococcus pneumoniae D39]
gi|15458118|gb|AAK99346.1| Hypothetical protein [Streptococcus pneumoniae R6]
gi|116076931|gb|ABJ54651.1| matrixin family protein [Streptococcus pneumoniae D39]
Length = 219
Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats.
Identities = 88/220 (40%), Positives = 137/220 (62%), Gaps = 9/220 (4%)
Query: 15 IWNIIWSIIKTLIILAAIIFAFLYFTNNHKTDLESTI--SEQWNKITTFFSNDFSLPDTM 72
+W + W ++ +++L + F L++ N D + + +E+ KI + + +
Sbjct: 1 MWRLFWRLVWIVVLLCVLAFGLLWYLNG---DFQGALKQAERSVKIGQQSIDQWEKTGQL 57
Query: 73 SKLS-TDNYKHEAGSRWSQNSASVYI-ASTDKTIVKAYQTALANWNATGSFTFNIISDKA 130
KLS TD+++H G RW+Q SA +Y+ D +AY A+ NWN TG+F F ++++ +
Sbjct: 58 PKLSQTDSHQHSEG-RWAQASARIYLDPQMDSRFQEAYLEAIQNWNQTGAFNFELVTESS 116
Query: 131 SADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDASYGYSFDRIVHTAE 190
ADITA + +D + AG AE++TN +T + V V+LN YYL + YGYS++R+VHTAE
Sbjct: 117 KADITATEMNDGGTPVAGEAESQTNLLTGQFLSVTVRLNHYYLSNPYYGYSYERLVHTAE 176
Query: 191 HELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLY 230
HELGHAIGLDH D E SVM +GS+ GIQ D+ ++K+Y
Sbjct: 177 HELGHAIGLDHTD-EKSVMQPAGSFYGIQEEDVANLRKIY 215
>gi|77405913|ref|ZP_00782994.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
gi|77175487|gb|EAO78275.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
Length = 127
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 76/128 (59%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Query: 104 IVKAYQTALANWNATGSFTFNIISDKASADITAKDYSDVNSQAAGLAETETNAVTNRMSH 163
+V AY+ A++NWNATG+F +D +ADI AKDYSD +QAAG+AETE NA+TNR+S
Sbjct: 1 MVSAYEQAISNWNATGAFVLQT-TDNPNADIIAKDYSDAKTQAAGVAETEKNALTNRISK 59
Query: 164 VDVKLNRYYLLDASYGYSFDRIVHTAEHELGHAIGLDHDDKETSVMASSGSYNGIQTVDI 223
V VKLN +YL + +GY RIV+TAEHELGHA+GL H+D++ SVM S GS+ GIQ VDI
Sbjct: 60 VTVKLNTFYLKNKQFGYDHTRIVNTAEHELGHALGLGHNDQQHSVMQSKGSHYGIQEVDI 119
Query: 224 TAVKKLYA 231
+K LYA
Sbjct: 120 QTLKNLYA 127
>gi|148543416|ref|YP_001270786.1| peptidase M10A and M12B, matrixin and adamalysin [Lactobacillus
reuteri F275]
gi|148530450|gb|ABQ82449.1| peptidase M10A and M12B, matrixin and adamalysin [Lactobacillus
reuteri F275]
Length = 244
Score = 137 bits (344), Expect = 7e-31, Method: Composition-based stats.
Identities = 74/146 (50%), Positives = 100/146 (68%), Gaps = 1/146 (0%)
Query: 87 RWSQNSASVYIASTDKTIVKAYQTALANWNATGSFTFNIISDKASADITAKDYSDVNSQA 146
RW+ N A+VY+ + + + A TA+ NWN TG+FTF +++++ ADI + +S A
Sbjct: 98 RWATNQATVYVNTNNAQLDAATNTAIQNWNQTGAFTFKPVNNQSKADIVVTTMNRSDSNA 157
Query: 147 AGLAETETNAVTNRMSHVDVKLNRYYLLDASYGYSFDRIVHTAEHELGHAIGLDHDDKET 206
AGL +T +N++T R H V LN YYL D SYGYS +RIV+TAEHELGHAIGLDH +
Sbjct: 158 AGLTKTSSNSLTRRFMHATVYLNTYYLTDPSYGYSQERIVNTAEHELGHAIGLDHTNA-V 216
Query: 207 SVMASSGSYNGIQTVDITAVKKLYAN 232
SVM +GS+ IQ D+ AV+KLYAN
Sbjct: 217 SVMQPAGSFYTIQPDDVQAVQKLYAN 242
>gi|92089044|ref|ZP_01273998.1| Peptidase M10A and M12B, matrixin and adamalysin [Lactobacillus
reuteri 100-23]
gi|91804207|gb|EAS89052.1| Peptidase M10A and M12B, matrixin and adamalysin [Lactobacillus
reuteri 100-23]
Length = 244
Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats.
Identities = 74/146 (50%), Positives = 100/146 (68%), Gaps = 1/146 (0%)
Query: 87 RWSQNSASVYIASTDKTIVKAYQTALANWNATGSFTFNIISDKASADITAKDYSDVNSQA 146
RW+ N A+VY+ + + + A TA+ NWN TG+FTF +++++ ADI + +S A
Sbjct: 98 RWATNQATVYVNTNNAQLDAATNTAIQNWNQTGAFTFKPVNNQSKADIVVTTMNRSDSNA 157
Query: 147 AGLAETETNAVTNRMSHVDVKLNRYYLLDASYGYSFDRIVHTAEHELGHAIGLDHDDKET 206
AGL +T +N++T R H V LN YYL D SYGYS +RIV+TAEHELGHAIGLDH +
Sbjct: 158 AGLTKTSSNSLTRRFMHATVYLNTYYLTDPSYGYSQERIVNTAEHELGHAIGLDHTNA-V 216
Query: 207 SVMASSGSYNGIQTVDITAVKKLYAN 232
SVM +GS+ IQ D+ AV+KLYAN
Sbjct: 217 SVMQPAGSFYTIQPDDVQAVQKLYAN 242
>gi|90961058|ref|YP_534974.1| Putative Zn-dependent protease [Lactobacillus salivarius subsp.
salivarius UCC118]
gi|90820252|gb|ABD98891.1| Putative Zn-dependent protease [Lactobacillus salivarius subsp.
salivarius UCC118]
Length = 217
Score = 133 bits (335), Expect = 7e-30, Method: Composition-based stats.
Identities = 78/158 (49%), Positives = 100/158 (63%), Gaps = 3/158 (1%)
Query: 73 SKLSTDNYKHEAGSRWSQNSASVYIASTDKTIVKAYQTALANWNATGSFTFNIISDKASA 132
+K+ TDN K++ +RW N+A+VYI D T+ A+ +A+ WN TG+FTF I++DK A
Sbjct: 60 NKVQTDNVKYD-NNRWPNNTATVYIDIDDSTLYNAFVSAIKQWNNTGAFTFKIVNDKKGA 118
Query: 133 DITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDASYGYSFDRIVHTAEHE 192
DI K + + A T T R+ V LNRYYL A+YGYS RI++TAEHE
Sbjct: 119 DIVGKLMENDDGTAGTTDTTTDEQ-TKRIIKATVYLNRYYLESATYGYSEQRIINTAEHE 177
Query: 193 LGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLY 230
LGHAIGLDH D E SVM +GSY IQ D+ VKKLY
Sbjct: 178 LGHAIGLDHTD-EVSVMQPAGSYYTIQPRDVDVVKKLY 214
>gi|148543664|ref|YP_001271034.1| peptidase M10A and M12B, matrixin and adamalysin [Lactobacillus
reuteri F275]
gi|148530698|gb|ABQ82697.1| peptidase M10A and M12B, matrixin and adamalysin [Lactobacillus
reuteri F275]
Length = 193
Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats.
Identities = 75/148 (50%), Positives = 103/148 (69%), Gaps = 2/148 (1%)
Query: 84 AGSRWSQNSASVYIASTDKTIVKAYQTALANWNATGSFTFNIISDKASADITAKDYSDVN 143
A +RW QNSA++Y+ ++ + A +TA+A WN T +FTF I++DK +A+I+ +D N
Sbjct: 34 ADARWEQNSATIYVNISNPVLKNATETAIAQWNNTKAFTFKIVNDK-NANISVSAVNDPN 92
Query: 144 SQAAGLAETETNAVTNRMSHVDVKLNRYYLLDASYGYSFDRIVHTAEHELGHAIGLDHDD 203
+ AAGL T N+ T H V+LN YYLL+ ++GYS +RIV+TAEHELGHAIGL H +
Sbjct: 93 NGAAGLTNTSMNSATGYYLHATVELNSYYLLNPAFGYSQERIVNTAEHELGHAIGLQHTN 152
Query: 204 KETSVMASSGSYNGIQTVDITAVKKLYA 231
K SVM +GSY IQ+ DI AVK LY+
Sbjct: 153 K-ISVMQPAGSYYPIQSRDIEAVKALYS 179
>gi|62422056|gb|AAX82610.1| putative metalloproteinase [Lactobacillus reuteri]
Length = 244
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 72/146 (49%), Positives = 99/146 (67%), Gaps = 1/146 (0%)
Query: 87 RWSQNSASVYIASTDKTIVKAYQTALANWNATGSFTFNIISDKASADITAKDYSDVNSQA 146
RW+ N A+VY+ + + + A TA+ +WN TG+FTF +++++ ADI + +S A
Sbjct: 98 RWATNQATVYVNTNNAQLDAATNTAIQSWNQTGAFTFKPVNNQSKADIVVTTMNRSDSNA 157
Query: 147 AGLAETETNAVTNRMSHVDVKLNRYYLLDASYGYSFDRIVHTAEHELGHAIGLDHDDKET 206
AGL +T +N++T R H V LN YYL D SYGYS +RIV+TAEHELGHAIGLDH +
Sbjct: 158 AGLTKTSSNSLTRRFMHATVYLNTYYLTDPSYGYSQERIVNTAEHELGHAIGLDHTNA-V 216
Query: 207 SVMASSGSYNGIQTVDITAVKKLYAN 232
SVM +GS+ IQ D+ AV+KLY N
Sbjct: 217 SVMQPAGSFYTIQPDDVQAVQKLYTN 242
>gi|92089729|ref|ZP_01274661.1| Peptidase M10A and M12B, matrixin and adamalysin [Lactobacillus
reuteri 100-23]
gi|91803515|gb|EAS88382.1| Peptidase M10A and M12B, matrixin and adamalysin [Lactobacillus
reuteri 100-23]
Length = 193
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 74/148 (50%), Positives = 103/148 (69%), Gaps = 2/148 (1%)
Query: 84 AGSRWSQNSASVYIASTDKTIVKAYQTALANWNATGSFTFNIISDKASADITAKDYSDVN 143
A +RW QN+A++YI ++ + A +TA+A WN T +FTF I++DK +A+I+ +D N
Sbjct: 34 ADARWEQNTATIYINISNPVLKNATETAIAQWNNTKAFTFKIVNDK-NANISVSAVNDPN 92
Query: 144 SQAAGLAETETNAVTNRMSHVDVKLNRYYLLDASYGYSFDRIVHTAEHELGHAIGLDHDD 203
+ AAGL T N+ T H V+LN YYLL+ ++GYS +RIV+TAEHELGHAIGL H +
Sbjct: 93 NGAAGLTNTSMNSATGYYLHATVELNSYYLLNPAFGYSQERIVNTAEHELGHAIGLQHTN 152
Query: 204 KETSVMASSGSYNGIQTVDITAVKKLYA 231
K SVM +GSY IQ+ DI AV+ LY+
Sbjct: 153 K-ISVMQPAGSYYPIQSRDIQAVEALYS 179
>gi|42519710|ref|NP_965640.1| hypothetical protein LJ0615 [Lactobacillus johnsonii NCC 533]
gi|41583999|gb|AAS09606.1| hypothetical protein LJ_0615 [Lactobacillus johnsonii NCC 533]
Length = 214
Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats.
Identities = 78/209 (37%), Positives = 115/209 (55%), Gaps = 5/209 (2%)
Query: 24 KTLIILAAIIFAFLYFTNNHKTDLESTISEQWNKITTFFS--NDFSLPDTMSKLSTDNYK 81
KT+++LA + + ++E T + N + + F P+ + D
Sbjct: 6 KTILVLALLFVGLEFAYQKAAPEIEKTFGTR-NPLPYLTAKVQQFISPEKIQNDDKDG-D 63
Query: 82 HEAGSRWSQNSASVYIASTDKTIVKAYQTALANWNATGSFTFNIISDKASADITAKDYSD 141
+ G + N+A+VYI +D T+ +A + WN TG+F F I +D+ +A I K +D
Sbjct: 64 NSKGHTFDSNTATVYIDLSDPTLKQAALDGINVWNNTGAFNFKITNDRNNAKIIIKSMND 123
Query: 142 VNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDASYGYSFDRIVHTAEHELGHAIGLDH 201
+ AAGL +T+ N++T + V+LN YYLL+ SYGY+ RIV+T EHELGHAIGL H
Sbjct: 124 GETNAAGLTDTQYNSLTGHLLKATVRLNSYYLLNPSYGYNNGRIVNTVEHELGHAIGLGH 183
Query: 202 DDKETSVMASSGSYNGIQTVDITAVKKLY 230
D SVM GS+ IQ D+ VKKLY
Sbjct: 184 KDG-ISVMYPQGSFYTIQPSDVQDVKKLY 211
>gi|116630237|ref|YP_815409.1| Predicted Zn-dependent protease [Lactobacillus gasseri ATCC 33323]
gi|116095819|gb|ABJ60971.1| Predicted Zn-dependent protease [Lactobacillus gasseri ATCC 33323]
Length = 214
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 79/209 (37%), Positives = 115/209 (55%), Gaps = 5/209 (2%)
Query: 24 KTLIILAAIIFAFLYFTNNHKTDLESTISEQWNKITTFFS--NDFSLPDTMSKLSTDNYK 81
K++++LA + + ++E T + N + + F P+ + T N
Sbjct: 6 KSILVLALLFIGLNFAYQKTAPEIEKTFGTR-NPLPYLTAKVQQFISPEKIQNDDT-NAD 63
Query: 82 HEAGSRWSQNSASVYIASTDKTIVKAYQTALANWNATGSFTFNIISDKASADITAKDYSD 141
G + NSASVY+ +D T+ +A + WN TG+F F I +DK +A I K +D
Sbjct: 64 SSKGHTFETNSASVYLDLSDPTLRQATIDGINIWNNTGAFNFKITNDKNNAKIIIKAMND 123
Query: 142 VNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDASYGYSFDRIVHTAEHELGHAIGLDH 201
+ AAGL +T+ N++T + V+LN YYLL+ SYGY+ RIV+T EHELGHAIGL H
Sbjct: 124 GQTNAAGLTDTQYNSLTGHLIKATVRLNSYYLLNPSYGYNHGRIVNTVEHELGHAIGLGH 183
Query: 202 DDKETSVMASSGSYNGIQTVDITAVKKLY 230
+ SVM GS+ IQ D+ VKKLY
Sbjct: 184 KNG-ISVMYPQGSFYTIQPSDVEDVKKLY 211
>gi|116514731|ref|YP_813637.1| Predicted Zn-dependent protease [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|116094046|gb|ABJ59199.1| Predicted Zn-dependent protease [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 220
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 67/150 (44%), Positives = 84/150 (56%), Gaps = 2/150 (1%)
Query: 81 KHEAGSRWSQNSASVYIASTDKTIVKAYQTALANWNATGSFTFNIISDKASADITAKDYS 140
K+ G RW + +A VYI + A A+A WN TG+FTF K +A I S
Sbjct: 69 KNTTGYRWPKATAKVYIGVKQTDLYNATVNAMAAWNQTGAFTFKQTKSKKNAQIVVVANS 128
Query: 141 DVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDASYGYSFDRIVHTAEHELGHAIGLD 200
N++AAGL + + TNR+ V LN YYL + Y Y+ RIV+T EHELGHAIGLD
Sbjct: 129 K-NNEAAGLTTYKYLSHTNRLYSAQVALNTYYLENDYYNYTQARIVNTVEHELGHAIGLD 187
Query: 201 HDDKETSVMASSGSYNGIQTVDITAVKKLY 230
H T VM +GS IQ DI VKK+Y
Sbjct: 188 HRTGVT-VMYPTGSIYTIQPKDIKLVKKIY 216
>gi|58337935|ref|YP_194520.1| conserved domain [Lactobacillus acidophilus NCFM]
gi|58255252|gb|AAV43489.1| conserved domain [Lactobacillus acidophilus NCFM]
Length = 227
Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats.
Identities = 69/161 (42%), Positives = 90/161 (55%), Gaps = 5/161 (3%)
Query: 74 KLSTDNYKHEAGSR---WSQNSASVYIASTDKTIVK-AYQTALANWNATGSFTFNIISDK 129
K TD +++ S WS+ A+VYI D ++ A A+ WN TG+FTF I +K
Sbjct: 65 KTDTDKTANDSTSDSRVWSKPEANVYIDIHDNMQLRSATIDAMNAWNRTGAFTFKQIDNK 124
Query: 130 ASADITAKDYSDVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDASYGYSFDRIVHTA 189
+A I D + AAG T N T + V LNRYYL + YGYS +RI++TA
Sbjct: 125 KNAQIIVNVVDDSGTDAAGETATTYNPATGHLLKATVHLNRYYLQNEWYGYSNNRIINTA 184
Query: 190 EHELGHAIGLDHDDKETSVMASSGSYNGIQTVDITAVKKLY 230
EHELGHAIGL+H + SVM GS IQ DI +KK+Y
Sbjct: 185 EHELGHAIGLNHTN-SVSVMYPKGSIYTIQPQDIKNLKKIY 224
>gi|104774607|ref|YP_619587.1| hypothetical protein Ldb1920 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423688|emb|CAI98658.1| Hypothetical protein [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
Length = 220
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 66/150 (44%), Positives = 83/150 (55%), Gaps = 2/150 (1%)
Query: 81 KHEAGSRWSQNSASVYIASTDKTIVKAYQTALANWNATGSFTFNIISDKASADITAKDYS 140
K+ G RW + +A VYI + A A+A WN TG+FTF +K +A I S
Sbjct: 69 KNTTGYRWPKATAKVYIGVKQTDLYNATVNAMAAWNQTGAFTFKQTKNKKNAQIVVVANS 128
Query: 141 DVNSQAAGLAETETNAVTNRMSHVDVKLNRYYLLDASYGYSFDRIVHTAEHELGHAIGLD 200
N+ AA L + + TNR+ V LN YYL + Y Y+ RIV+T EHELGHAIGLD
Sbjct: 129 K-NNGAACLTTYKYLSHTNRLYSAQVALNTYYLENDYYNYTQARIVNTVEHELGHAIGLD 187
Query: 201 HDDKETSVMASSGSYNGIQTVDITAVKKLY 230
H T VM +GS IQ DI VKK+Y
Sbjct: 188 HRTGVT-VMYPTGSIYTIQPKDIKLVKKIY 216
>gi|116333455|ref|YP_794982.1| Predicted Zn-dependent protease [Lactobacillus brevis ATCC 367]
gi|116098802|gb|ABJ63951.1| Predicted Zn-dependent protease [Lactobacillus brevis ATCC 367]
Length = 191
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/148 (34%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 87 RWSQNSASVYIASTDKTIVKAYQTALANWNATGSFTFNIISDKASADITAKDYSDVNSQA 146
R+S + A+ I++ + +Q A+ WN TG+F F ++A +T K S +A
Sbjct: 39 RFSTDHATYTISAQSPYYRRIWQEAIKAWNETGAFHFQKADSASAAQVTLKVAS--KHEA 96
Query: 147 AGLAE----TETNAVTNRMSHVDVKLNRYYLLDASYGYSFDRIVHTAEHELGHAIGLDHD 202
A L E TE A + + LN L + Y YS + AEHELGH +GL H+
Sbjct: 97 AALGEDVGLTEYTAKQSYLQRATATLNAALLRE--YNYSRANQLAVAEHELGHVMGLAHN 154
Query: 203 DKETSVMASSGSYNGIQTVDITAVKKLY 230
+ SVM GIQ VDI VK Y
Sbjct: 155 PDKHSVMYYRNRSEGIQPVDIQGVKLRY 182
>gi|28377269|ref|NP_784161.1| extracellular zinc metalloproteinase (putative) [Lactobacillus
plantarum WCFS1]
gi|28270100|emb|CAD63000.1| extracellular zinc metalloproteinase (putative) [Lactobacillus
plantarum WCFS1]
Length = 187
Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/148 (33%), Positives = 65/148 (43%), Gaps = 8/148 (5%)
Query: 86 SRWSQNSASVYIASTDKTIVKAYQTALANWNATGSFTFNIISDKASADITAKDYSDVNSQ 145
SRW + Y+ YQ A+ WNATG F F + A IT + + Q
Sbjct: 38 SRWPHAQVT-YVIQASSYERHVYQAAIQAWNATGHFKF-VPGTTAHHQITLGTSNATSGQ 95
Query: 146 AAGLAETETNAVTNRMSHVDVKLNRYYLLDAS---YGYSFDRIVHTAEHELGHAIGLDHD 202
LA + + ++ YLL + Y YS+ VH AEHELGH IGL+H
Sbjct: 96 YYRLAGITFSTGYTNGYYTKAQV---YLLTRNFVRYHYSYTDQVHVAEHELGHTIGLEHS 152
Query: 203 DKETSVMASSGSYNGIQTVDITAVKKLY 230
SVM + YNGI D AV+ Y
Sbjct: 153 RDRHSVMLADNRYNGISAADSAAVRLRY 180
>gi|58337662|ref|YP_194247.1| hypothetical protein LBA1391 [Lactobacillus acidophilus NCFM]
gi|58254979|gb|AAV43216.1| hypothetical protein LBA1391 [Lactobacillus acidophilus NCFM]
Length = 222
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/144 (37%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 92 SASVYIASTDKTIVKAYQTALANWNATGSFTFNIISD--KASADITAKDYSDVNSQAAGL 149
S +YI D + Q A+ WNAT F + KA +TA DY D + AGL
Sbjct: 84 SIFIYINQNDPN-YQTVQDAIKAWNATKVIKFKQAFNYQKAQIIVTAHDYGD--TSWAGL 140
Query: 150 AETETNAVTNRMSHVDVKLNRYYLLDASYGYSFDRIVHTAEHELGHAIGLDHDDKETSVM 209
E V V LN +YL ++ + AEHELGHAIGL H+D + SVM
Sbjct: 141 TEIPDTPRGYLYGSV-VYLNNFYLRQSTPQVALS----VAEHELGHAIGLQHNDTQPSVM 195
Query: 210 ASSGSYNG---IQTVDITAVKKLY 230
SS + IQ DI AVK +Y
Sbjct: 196 NSSVTEQNAYTIQPCDIAAVKAIY 219
>gi|28379467|ref|NP_786359.1| extracellular zinc metalloproteinase [Lactobacillus plantarum
WCFS1]
gi|28272306|emb|CAD65219.1| extracellular zinc metalloproteinase [Lactobacillus plantarum
WCFS1]
Length = 344
Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 85 GSRWSQNSASVYIASTDKTIVKAYQTALANWNATGSFTFNIISDKASADITAKDYSDVNS 144
G R+ + +A+ S+ + A A+W G FT+ + A+A T Y +
Sbjct: 37 GYRYDKQAANYQDLSSSDYYKDVWNNATASWKKAG-FTW---TKAATAKTTVSSYDGSSD 92
Query: 145 QA-AGLAETETNAVTNRMSHVDVKLNRYYLLDASYGYSFDRIVHTAEHELGHAIGLDHDD 203
AG N T ++ V++NR Y Y+ + AEHELGHA+G+ H++
Sbjct: 93 MTLAGYNSVSYNKSTGEITSSKVRINRAVF--EKYNYTKAERTNVAEHELGHALGIGHNN 150
Query: 204 KET-SVMASSGSYNGIQTVDITAVKKLYA 231
++ SVM + Y IQ DI +K YA
Sbjct: 151 TDSVSVMNPANRYYTIQACDINGMKARYA 179
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.317 0.129 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 800,270,441
Number of Sequences: 5470121
Number of extensions: 29717876
Number of successful extensions: 107071
Number of sequences better than 1.0e-05: 42
Number of HSP's better than 0.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 106942
Number of HSP's gapped (non-prelim): 43
length of query: 232
length of database: 1,894,087,724
effective HSP length: 128
effective length of query: 104
effective length of database: 1,193,912,236
effective search space: 124166872544
effective search space used: 124166872544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 127 (53.5 bits)