BLASTP 2.2.4 [Aug-26-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= SAG1401
(311 letters)
Database: nr
1,487,057 sequences; 479,114,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22537548|ref|NP_688399.1| conserved hypothetical protein TIGR... 641 0.0
gi|25011513|ref|NP_735908.1| Unknown [Streptococcus agalactiae N... 639 0.0
gi|24380073|ref|NP_722028.1| conserved hypothetical protein [Str... 561 e-159
gi|15674523|ref|NP_268697.1| conserved hypothetical protein [Str... 558 e-158
gi|19745533|ref|NP_606669.1| conserved hypothetical protein [Str... 557 e-158
gi|15674248|ref|NP_268423.1| hypothetical protein [Lactococcus l... 462 e-129
gi|29375385|ref|NP_814539.1| conserved hypothetical protein TIGR... 440 e-122
gi|22991759|ref|ZP_00036452.1| hypothetical protein [Enterococcu... 419 e-116
gi|27468351|ref|NP_764988.1| conserved hypothetical protein [Sta... 349 4e-95
gi|16080100|ref|NP_390926.1| similar to hypothetical proteins [B... 346 3e-94
gi|15924752|ref|NP_372286.1| conserved hypothetical protein [Sta... 341 9e-93
gi|30264818|ref|NP_847195.1| conserved hypothetical protein TIGR... 333 3e-90
gi|30022819|ref|NP_834450.1| Fe-S oxidoreductase [Bacillus cereu... 331 1e-89
gi|15615846|ref|NP_244150.1| BH3284~unknown conserved protein [B... 324 1e-87
gi|16803701|ref|NP_465186.1| similar to conserved hypothetical p... 323 2e-87
gi|16800838|ref|NP_471106.1| similar to conserved hypothetical p... 322 4e-87
gi|18311539|ref|NP_563473.1| conserved hypothetical protein [Clo... 311 1e-83
gi|28209949|ref|NP_780893.1| Fe-S oxidoreductase [Clostridium te... 308 8e-83
gi|15896484|ref|NP_349833.1| Ucharacterized Fe-S oxidoreductase ... 289 5e-77
gi|23111943|ref|ZP_00097500.1| hypothetical protein [Desulfitoba... 285 1e-75
gi|15902613|ref|NP_358163.1| Hypothetical protein [Streptococcus... 271 8e-72
gi|23054734|ref|ZP_00080881.1| hypothetical protein [Geobacter m... 246 3e-64
gi|19704477|ref|NP_604039.1| Oxygen-independent coproporphyrinog... 241 9e-63
gi|21402795|ref|NP_658780.1| Biotin_synth, Biotin synthase [Baci... 236 5e-61
gi|15902614|ref|NP_358164.1| Hypothetical protein [Streptococcus... 232 7e-60
gi|23054553|ref|ZP_00080700.1| hypothetical protein [Geobacter m... 219 6e-56
gi|15642368|ref|NP_232001.1| conserved hypothetical protein [Vib... 218 8e-56
gi|28897259|ref|NP_796864.1| conserved hypothetical protein [Vib... 212 7e-54
gi|22124047|ref|NP_667470.1| hypothetical protein [Yersinia pest... 209 5e-53
gi|27364014|ref|NP_759542.1| Predicted Fe-S oxidoreductase [Vibr... 208 8e-53
gi|16123700|ref|NP_407013.1| conserved hypothetical protein [Yer... 208 1e-52
gi|24114499|ref|NP_709009.1| orf, conserved hypothetical protein... 207 2e-52
gi|30064548|ref|NP_838719.1| hypothetical protein [Shigella flex... 206 3e-52
gi|15803751|ref|NP_289785.1| orf, hypothetical protein [Escheric... 206 3e-52
gi|606150|gb|AAA58013.1| ORF_f309 [Escherichia coli] 206 4e-52
gi|16762091|ref|NP_457708.1| conserved hypothetical protein [Sal... 204 2e-51
gi|15606062|ref|NP_213439.1| hypothetical protein [Aquifex aeoli... 203 4e-51
gi|26249797|ref|NP_755837.1| Hypothetical protein yhcC [Escheric... 202 7e-51
gi|15643281|ref|NP_228325.1| conserved hypothetical protein [The... 197 2e-49
gi|32473425|ref|NP_866419.1| conserved hypothetical protein [Pir... 193 4e-48
gi|24372904|ref|NP_716946.1| conserved hypothetical protein [She... 192 8e-48
gi|23475791|ref|ZP_00131067.1| hypothetical protein [Desulfovibr... 190 3e-47
gi|29349533|ref|NP_813036.1| conserved hypothetical protein [Bac... 190 3e-47
gi|20093484|ref|NP_613331.1| Uncharacterized Fe-S oxidoreductase... 179 4e-44
gi|32265988|ref|NP_860020.1| conserved hypothetical protein [Hel... 179 4e-44
gi|27885653|gb|EAA23081.1| Coproporphyrinogen oxidase, anaerobic... 169 6e-41
gi|23021883|ref|ZP_00061533.1| hypothetical protein [Clostridium... 160 3e-38
gi|10956071|ref|NP_053055.1| unknown [Selenomonas ruminantium] >... 155 9e-37
gi|15668663|ref|NP_247462.1| conserved hypothetical protein [Met... 151 2e-35
gi|15375026|gb|AAK94786.1| hypothetical protein [Klebsiella aero... 150 3e-35
gi|21402796|ref|NP_658781.1| hypothetical protein predicted by G... 69 1e-10
gi|18312276|ref|NP_558943.1| conserved hypothetical protein [Pyr... 65 1e-09
gi|15790500|ref|NP_280324.1| Vng1510c [Halobacterium sp. NRC-1] ... 60 4e-08
gi|11279264|pir||T31310 hypothetical protein - Cenarchaeum symbi... 57 5e-07
gi|20089710|ref|NP_615785.1| histone acetyltransferase [Methanos... 54 3e-06
gi|21228076|ref|NP_633998.1| histone acetyltransferase [Methanos... 53 5e-06
gi|11499978|ref|NP_071224.1| conserved hypothetical protein [Arc... 53 8e-06
gi|15669323|ref|NP_248128.1| conserved hypothetical protein [Met... 51 2e-05
gi|14591614|ref|NP_143696.1| hypothetical protein PH1867 [Pyroco... 50 3e-05
gi|6325171|ref|NP_015239.1| elongator protein; histone and other... 50 6e-05
gi|19115774|ref|NP_594862.1| conserved hypothetical protein [Sch... 49 8e-05
>gi|22537548|ref|NP_688399.1| conserved hypothetical protein
TIGR01212 [Streptococcus agalactiae 2603V/R]
gi|22534430|gb|AAN00272.1|AE014256_4 conserved hypothetical protein
TIGR01212 [Streptococcus agalactiae 2603V/R]
Length = 311
Score = 641 bits (1653), Expect = 0.0
Identities = 311/311 (100%), Positives = 311/311 (100%)
Query: 1 MKKRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEA 60
MKKRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEA
Sbjct: 1 MKKRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEA 60
Query: 61 PIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGT 120
PIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGT
Sbjct: 61 PIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGT 120
Query: 121 RPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAP 180
RPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAP
Sbjct: 121 RPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAP 180
Query: 181 KVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRL 240
KVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRL
Sbjct: 181 KVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRL 240
Query: 241 LSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQS 300
LSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQS
Sbjct: 241 LSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQS 300
Query: 301 YQGCKAEVKHD 311
YQGCKAEVKHD
Sbjct: 301 YQGCKAEVKHD 311
>gi|25011513|ref|NP_735908.1| Unknown [Streptococcus agalactiae
NEM316]
gi|24413052|emb|CAD47130.1| Unknown [Streptococcus agalactiae
NEM316]
Length = 311
Score = 639 bits (1648), Expect = 0.0
Identities = 310/311 (99%), Positives = 310/311 (99%)
Query: 1 MKKRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEA 60
MKKRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEA
Sbjct: 1 MKKRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEA 60
Query: 61 PIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGT 120
PIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGT
Sbjct: 61 PIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGT 120
Query: 121 RPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAP 180
RPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAP
Sbjct: 121 RPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAP 180
Query: 181 KVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRL 240
KVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRL
Sbjct: 181 KVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRL 240
Query: 241 LSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQS 300
LSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQS
Sbjct: 241 LSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQS 300
Query: 301 YQGCKAEVKHD 311
YQGCK EVKHD
Sbjct: 301 YQGCKVEVKHD 311
>gi|24380073|ref|NP_722028.1| conserved hypothetical protein
[Streptococcus mutans UA159]
gi|24378067|gb|AAN59334.1|AE014999_2 conserved hypothetical protein
[Streptococcus mutans UA159]
Length = 310
Score = 561 bits (1446), Expect = e-159
Identities = 262/308 (85%), Positives = 288/308 (93%)
Query: 1 MKKRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEA 60
M KRY +NDYYR +FGEK FK+PIDAGFDCPNRDGTVA GGCTFCTVSGSGDAIVAPEA
Sbjct: 1 MNKRYNTLNDYYRRIFGEKTFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDAIVAPEA 60
Query: 61 PIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGT 120
PIR+QFYKE+DFMHRKWP+V KYLVYFQNFTNTH K+E+I+ERYEQAINEPGVIGINIGT
Sbjct: 61 PIRDQFYKEVDFMHRKWPDVKKYLVYFQNFTNTHDKVEVIRERYEQAINEPGVIGINIGT 120
Query: 121 RPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAP 180
RPDCLPD TI YLAELS+R+HVTLELGLQTTYE TS LINRAHSY LY +TVKR+R+LAP
Sbjct: 121 RPDCLPDVTILYLAELSQRLHVTLELGLQTTYEKTSKLINRAHSYQLYVETVKRVRDLAP 180
Query: 181 KVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRL 240
KVEIVSHLINGLPGE+H+MM+ENVRRCVTDNDI GIKLHLLHLMTNTRMQRDYHEGRL L
Sbjct: 181 KVEIVSHLINGLPGESHEMMLENVRRCVTDNDIDGIKLHLLHLMTNTRMQRDYHEGRLHL 240
Query: 241 LSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQS 300
LS E+Y++IICDQLEIIPK+IVIHR+TGDAPR MLIGPMWSLNKWEVLN+ID+EME+R +
Sbjct: 241 LSMEEYVNIICDQLEIIPKNIVIHRLTGDAPRDMLIGPMWSLNKWEVLNSIDREMERRNA 300
Query: 301 YQGCKAEV 308
YQGCK EV
Sbjct: 301 YQGCKLEV 308
>gi|15674523|ref|NP_268697.1| conserved hypothetical protein
[Streptococcus pyogenes]
gi|21909810|ref|NP_664078.1| conserved hypothetical protein
[Streptococcus pyogenes MGAS315]
gi|28896497|ref|NP_802847.1| conserved hypothetical protein
[Streptococcus pyogenes SSI-1]
gi|13621626|gb|AAK33418.1| conserved hypothetical protein
[Streptococcus pyogenes M1 GAS]
gi|21903996|gb|AAM78881.1| conserved hypothetical protein
[Streptococcus pyogenes MGAS315]
gi|28811751|dbj|BAC64680.1| conserved hypothetical protein
[Streptococcus pyogenes SSI-1]
Length = 306
Score = 558 bits (1437), Expect = e-158
Identities = 260/307 (84%), Positives = 290/307 (93%), Gaps = 1/307 (0%)
Query: 1 MKKRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEA 60
MKKRY+ +N++YR+LFG K+FK+PIDAGFDCPNRDGTVA GGCTFCTVSGSGDAIVAP+A
Sbjct: 1 MKKRYQTLNEHYRQLFGAKMFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDAIVAPDA 60
Query: 61 PIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGT 120
PI+EQFYKEIDFMHRKWP+VN+YLVYFQNFTNTH +++I++RYEQAINEPGV+GINIGT
Sbjct: 61 PIKEQFYKEIDFMHRKWPDVNRYLVYFQNFTNTHDTVDVIRDRYEQAINEPGVVGINIGT 120
Query: 121 RPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAP 180
RPDCLPD+TI YLAELSERMHVT+ELGLQTTYE TS LINRAHSYDLYK+TV+R+R P
Sbjct: 121 RPDCLPDDTIAYLAELSERMHVTVELGLQTTYEETSRLINRAHSYDLYKETVRRLRHY-P 179
Query: 181 KVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRL 240
+ IVSHLINGLP ETHDMM+ENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRL+L
Sbjct: 180 NINIVSHLINGLPKETHDMMLENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLKL 239
Query: 241 LSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQS 300
LSQ+DY+SIICDQLEIIPKHIVIHRITGDAPR MLIGPMWSLNKWEVLNAIDKEME+R S
Sbjct: 240 LSQKDYVSIICDQLEIIPKHIVIHRITGDAPRDMLIGPMWSLNKWEVLNAIDKEMERRGS 299
Query: 301 YQGCKAE 307
+QGCK +
Sbjct: 300 FQGCKVD 306
>gi|19745533|ref|NP_606669.1| conserved hypothetical protein
[Streptococcus pyogenes MGAS8232]
gi|19747653|gb|AAL97168.1| conserved hypothetical protein
[Streptococcus pyogenes MGAS8232]
Length = 306
Score = 557 bits (1436), Expect = e-158
Identities = 260/307 (84%), Positives = 289/307 (93%), Gaps = 1/307 (0%)
Query: 1 MKKRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEA 60
MKKRY+ +N++YR+LFG K+FK+PIDAGFDCPNRDGTVA GGCTFCTVSGSGDAIVAP+A
Sbjct: 1 MKKRYQTLNEHYRQLFGAKMFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDAIVAPDA 60
Query: 61 PIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGT 120
PI+EQFYKEIDFMHRKWP+VN+YLVYFQNFTNTH +++I++RYEQAINEPGV+GINIGT
Sbjct: 61 PIKEQFYKEIDFMHRKWPDVNRYLVYFQNFTNTHDTVDVIRDRYEQAINEPGVVGINIGT 120
Query: 121 RPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAP 180
RPDCLPD+TI YLAELSERMHVT+ELGLQTTYE TS LINRAHSYDLYK TV+R+R P
Sbjct: 121 RPDCLPDDTIAYLAELSERMHVTVELGLQTTYEETSRLINRAHSYDLYKDTVRRLRHY-P 179
Query: 181 KVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRL 240
+ IVSHLINGLP ETHDMM+ENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRL+L
Sbjct: 180 NINIVSHLINGLPKETHDMMLENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLKL 239
Query: 241 LSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQS 300
LSQ+DY+SIICDQLEIIPKHIVIHRITGDAPR MLIGPMWSLNKWEVLNAIDKEME+R S
Sbjct: 240 LSQKDYVSIICDQLEIIPKHIVIHRITGDAPRDMLIGPMWSLNKWEVLNAIDKEMERRGS 299
Query: 301 YQGCKAE 307
+QGCK +
Sbjct: 300 FQGCKVD 306
>gi|15674248|ref|NP_268423.1| hypothetical protein [Lactococcus
lactis subsp. lactis]
gi|25305767|pir||B86908 hypothetical protein yxfC [imported] -
Lactococcus lactis subsp. lactis (strain IL1403)
gi|12725337|gb|AAK06364.1|AE006455_10 HYPOTHETICAL PROTEIN
[Lactococcus lactis subsp. lactis]
Length = 313
Score = 462 bits (1188), Expect = e-129
Identities = 211/305 (69%), Positives = 255/305 (83%), Gaps = 2/305 (0%)
Query: 1 MKKRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEA 60
M+KRY N+Y R FGEKIFK+PIDAGFDCPNRDGTVA GGCTFCTVSGSGD I+ PEA
Sbjct: 1 MQKRYTTWNEYLRTNFGEKIFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDMILEPEA 60
Query: 61 PIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGT 120
PI +QF E+ H+KWP V KY+VYFQNFTNTHA +E+++ER+EQA+N+P V+GI+IGT
Sbjct: 61 PIADQFAAEVAQFHKKWPGVKKYIVYFQNFTNTHAPVEVLRERFEQAVNQPDVVGISIGT 120
Query: 121 RPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAP 180
RPDCLPD+ + YLAEL+ RM V ++LGLQTTYE TS LINRAH Y+ Y VKR+R
Sbjct: 121 RPDCLPDDVVDYLAELNRRMEVWIDLGLQTTYEETSDLINRAHDYETYVDAVKRLR--VH 178
Query: 181 KVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRL 240
+ + +HLINGLPGET +MM+ENVRR V D+DIQG+KLHLLHLM TR+QRDYHEG+L+L
Sbjct: 179 NINVCTHLINGLPGETSEMMLENVRRMVLDSDIQGVKLHLLHLMKQTRLQRDYHEGKLQL 238
Query: 241 LSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQS 300
+SQE+Y+ +ICDQLE+IPK IVIHR+TGDAPR ++IGPMWSL KWEVLN+ID EME+R S
Sbjct: 239 MSQEEYVKVICDQLEMIPKEIVIHRLTGDAPRDLIIGPMWSLKKWEVLNSIDAEMERRGS 298
Query: 301 YQGCK 305
QGCK
Sbjct: 299 VQGCK 303
>gi|29375385|ref|NP_814539.1| conserved hypothetical protein
TIGR01212 [Enterococcus faecalis V583]
gi|29342845|gb|AAO80609.1| conserved hypothetical protein TIGR01212
[Enterococcus faecalis V583]
Length = 322
Score = 440 bits (1131), Expect = e-122
Identities = 202/301 (67%), Positives = 246/301 (81%), Gaps = 2/301 (0%)
Query: 3 KRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPI 62
KRY N R+ FGEKIFK+PID GFDCPNRDGTVA+GGCTFC+VSGSGD IVAP P+
Sbjct: 12 KRYHTWNYALRQQFGEKIFKVPIDGGFDCPNRDGTVAKGGCTFCSVSGSGDMIVAPSDPL 71
Query: 63 REQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRP 122
QF KEI MH+KWP V++Y+VYFQNFTNTHA +++I+ R+EQ +NE GV+G++IGTRP
Sbjct: 72 PLQFQKEIQLMHQKWPTVDQYIVYFQNFTNTHAPVDVIRHRFEQVVNEKGVVGLSIGTRP 131
Query: 123 DCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKV 182
DCLPDE + YLAEL+ER ++ +ELGLQTT+E TSA INRAH Y Y V ++R+ +
Sbjct: 132 DCLPDEVVNYLAELNERFYLWVELGLQTTFEETSAAINRAHDYQTYLDGVAKLRKHG--I 189
Query: 183 EIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLS 242
+ +HLINGLPGET MM ENVRR + D+DIQGIKLHLLHLMTNT+M RDY+EGRL+L+S
Sbjct: 190 RVCTHLINGLPGETPAMMRENVRRTIQDSDIQGIKLHLLHLMTNTKMMRDYNEGRLQLMS 249
Query: 243 QEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSYQ 302
+E Y+S+ICDQLE+IP IVIHR+TGDAP +IGPMWSL KWEVLNAID EM++R SYQ
Sbjct: 250 KEAYVSVICDQLEMIPPEIVIHRLTGDAPFETIIGPMWSLKKWEVLNAIDAEMKRRNSYQ 309
Query: 303 G 303
G
Sbjct: 310 G 310
>gi|22991759|ref|ZP_00036452.1| hypothetical protein [Enterococcus
faecium]
Length = 289
Score = 419 bits (1077), Expect = e-116
Identities = 192/281 (68%), Positives = 235/281 (83%), Gaps = 2/281 (0%)
Query: 23 LPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHRKWPEVNK 82
+PID GFDCPNRDGTVA GGCTFC+VSGSGD IVAPE P+ QF KEID MH+KWP V +
Sbjct: 1 MPIDGGFDCPNRDGTVAHGGCTFCSVSGSGDMIVAPEDPLPIQFQKEIDMMHQKWPHVQQ 60
Query: 83 YLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAELSERMHV 142
Y+VYFQNFTNTHA +EIIKER+EQ +N PGV+G+++GTRPDCLPDE + YLAEL+ERM++
Sbjct: 61 YIVYFQNFTNTHAPVEIIKERFEQVVNLPGVVGLSVGTRPDCLPDEVVDYLAELNERMYL 120
Query: 143 TLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPGETHDMMVE 202
+ELGLQTT+E TS LINRAH Y Y V ++R+ + + +HLINGLPGE+ +MM E
Sbjct: 121 WVELGLQTTFEETSKLINRAHDYQTYLDGVAKLRK--HNIRVCTHLINGLPGESLEMMKE 178
Query: 203 NVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLSQEDYISIICDQLEIIPKHIV 262
NVRR + D+DIQGIKLHL+HLM TRM RDYHEGRL+L+S+ DY+++ICDQLE+IPK I+
Sbjct: 179 NVRRTILDSDIQGIKLHLMHLMRKTRMLRDYHEGRLQLMSRPDYVNVICDQLEMIPKEII 238
Query: 263 IHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSYQG 303
IHR+TGDAP LIGPMWSL KWEVLNAID+E+ +R S+QG
Sbjct: 239 IHRLTGDAPWDSLIGPMWSLKKWEVLNAIDEELLRRDSFQG 279
>gi|27468351|ref|NP_764988.1| conserved hypothetical protein
[Staphylococcus epidermidis ATCC 12228]
gi|27315897|gb|AAO05032.1|AE016748_266 conserved hypothetical
protein [Staphylococcus epidermidis ATCC 12228]
Length = 317
Score = 349 bits (895), Expect = 4e-95
Identities = 159/301 (52%), Positives = 218/301 (71%), Gaps = 4/301 (1%)
Query: 3 KRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPI 62
KRY N + + FG+KIFK+ +D GFDCPNRDGTVA GGCTFC+ +GSGD PI
Sbjct: 12 KRYHTWNYHLKNKFGQKIFKVALDGGFDCPNRDGTVAHGGCTFCSAAGSGDFAGNRAEPI 71
Query: 63 REQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRP 122
QF K + MH KW E +Y+ YFQ FTNTHA +E++KE+YE + E GV+G++I TRP
Sbjct: 72 EVQFKKIKERMHEKWSE-GQYIAYFQAFTNTHAPVEVLKEKYEPVLKEDGVVGLSIATRP 130
Query: 123 DCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKV 182
DCLPD+ + YLAEL++R ++ +ELGLQT +++TS LINRAH Y V ++R+ +
Sbjct: 131 DCLPDDVVEYLAELNQRTYLWVELGLQTVHQSTSDLINRAHDMQTYYDGVTKLRK--HNI 188
Query: 183 EIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLS 242
+ +H+INGLPGE +DMM+E + V D+QGIK+HLLHL+ T M + Y +G L +S
Sbjct: 189 NVCTHIINGLPGENYDMMMETAKE-VAQMDVQGIKIHLLHLLKGTPMVKQYEKGMLEFMS 247
Query: 243 QEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSYQ 302
Q+DY +++CDQLE++P +++HRITGD P +++GPMWS+NKWEVLN ID E+ +R SYQ
Sbjct: 248 QQDYTNLVCDQLEVLPPEMIVHRITGDGPIDLMVGPMWSVNKWEVLNEIDNELARRNSYQ 307
Query: 303 G 303
G
Sbjct: 308 G 308
>gi|16080100|ref|NP_390926.1| similar to hypothetical proteins
[Bacillus subtilis]
gi|7429930|pir||D69999 conserved hypothetical protein ytqA -
Bacillus subtilis
gi|2293302|gb|AAC00380.1| YtqA [Bacillus subtilis]
gi|2635532|emb|CAB15026.1| ytqA [Bacillus subtilis subsp. subtilis
str. 168]
Length = 322
Score = 346 bits (888), Expect = 3e-94
Identities = 161/302 (53%), Positives = 220/302 (72%), Gaps = 4/302 (1%)
Query: 2 KKRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAP 61
+KRY +N + RE FG K+FK+ +D GFDCPNRDGTVA GGCTFC+ +GSGD
Sbjct: 13 EKRYHTLNYHLREHFGHKVFKVALDGGFDCPNRDGTVAHGGCTFCSAAGSGDFAGNRTDD 72
Query: 62 IREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTR 121
+ QF+ + MH KW + KY+ YFQ FTNTHA +E+++E++E + V+GI+I TR
Sbjct: 73 LITQFHDIKNRMHEKWKD-GKYIAYFQAFTNTHAPVEVLREKFESVLALDDVVGISIATR 131
Query: 122 PDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPK 181
PDCLPD+ + YLAEL+ER ++ +ELGLQT +E T+ LINRAH ++ Y + V ++R+
Sbjct: 132 PDCLPDDVVDYLAELNERTYLWVELGLQTVHERTALLINRAHDFNCYVEGVNKLRKHG-- 189
Query: 182 VEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLL 241
+ + SH+INGLP E DMM+E + V D D+QGIK+HLLHL+ T M + Y +G+L L
Sbjct: 190 IRVCSHIINGLPLEDRDMMMETA-KAVADLDVQGIKIHLLHLLKGTPMVKQYEKGKLEFL 248
Query: 242 SQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSY 301
SQ+DY+ ++CDQLEIIP +++HRITGD P ++IGPMWS+NKWEVL AI+KE+E R SY
Sbjct: 249 SQDDYVQLVCDQLEIIPPEMIVHRITGDGPIELMIGPMWSVNKWEVLGAINKELENRGSY 308
Query: 302 QG 303
QG
Sbjct: 309 QG 310
>gi|15924752|ref|NP_372286.1| conserved hypothetical protein
[Staphylococcus aureus subsp. aureus Mu50]
gi|15927337|ref|NP_374870.1| conserved hypothetical protein
[Staphylococcus aureus subsp. aureus N315]
gi|21283432|ref|NP_646520.1| conserved hypothetical protein
[Staphylococcus aureus subsp. aureus MW2]
gi|25305774|pir||D89961 conserved hypothetical protein SA1581
[imported] - Staphylococcus aureus (strain N315)
gi|13701556|dbj|BAB42849.1| conserved hypothetical protein
[Staphylococcus aureus subsp. aureus N315]
gi|14247534|dbj|BAB57924.1| conserved hypothetical protein
[Staphylococcus aureus subsp. aureus Mu50]
gi|21204873|dbj|BAB95568.1| conserved hypothetical protein
[Staphylococcus aureus subsp. aureus MW2]
Length = 317
Score = 341 bits (875), Expect = 9e-93
Identities = 157/307 (51%), Positives = 220/307 (71%), Gaps = 4/307 (1%)
Query: 3 KRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPI 62
KRY N + + FG+KIFK+ +D GFDCPNRDGTVA GGCTFC+ +GSGD I
Sbjct: 12 KRYHTWNYHLKNKFGQKIFKVALDGGFDCPNRDGTVAHGGCTFCSAAGSGDFAGNRADSI 71
Query: 63 REQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRP 122
QF + + MH KW E KY+ YFQ FTNTHA +E++KE++E + EPGV+G++IGTRP
Sbjct: 72 AVQFKEIKEKMHEKWHE-GKYIAYFQAFTNTHAPVEVLKEKFEPVLKEPGVVGLSIGTRP 130
Query: 123 DCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKV 182
DCLPD+ + YLA+L++R ++ +ELGLQT +++TS LINRAH Y V ++R+ +
Sbjct: 131 DCLPDDVVEYLADLNQRTYLWVELGLQTIHQSTSDLINRAHDMKTYYDGVAKLRK--HNI 188
Query: 183 EIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLS 242
+ +H+INGLPGE +DMM+ + V D+QGIK+HLLHL+ T M + Y +G L ++
Sbjct: 189 NVCTHIINGLPGEDYDMMMATAKE-VAQMDVQGIKIHLLHLLKGTPMVKQYDKGLLTFMT 247
Query: 243 QEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSYQ 302
QE+Y +++ DQLE+IP +++HRITGD P +++GPMWS+NKWEVLN ID E+ +R SYQ
Sbjct: 248 QEEYTNLVVDQLEVIPPEMIVHRITGDGPIDIMVGPMWSVNKWEVLNGIDAELARRNSYQ 307
Query: 303 GCKAEVK 309
G + + K
Sbjct: 308 GLRYKSK 314
>gi|30264818|ref|NP_847195.1| conserved hypothetical protein
TIGR01212 [Bacillus anthracis str. Ames]
gi|30259493|gb|AAP28681.1| conserved hypothetical protein TIGR01212
[Bacillus anthracis str. Ames]
Length = 319
Score = 333 bits (853), Expect = 3e-90
Identities = 160/301 (53%), Positives = 217/301 (71%), Gaps = 4/301 (1%)
Query: 3 KRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPI 62
KRY N + R FGEKIFK+ +DAGFDCPNRDGTVA GGCTFC+ +GSGD +
Sbjct: 14 KRYHTWNYHLRNEFGEKIFKVSLDAGFDCPNRDGTVAYGGCTFCSAAGSGDFAGDRRDDV 73
Query: 63 REQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRP 122
Q+++ + M KW + K + YFQ +TNTHA LE++KE++E + E V+G++I TRP
Sbjct: 74 ITQYHEMKEKMRSKWKD-GKCIAYFQAYTNTHAPLEVLKEKFEPLLAEKDVVGLSIATRP 132
Query: 123 DCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKV 182
DCLPD+ + YLA+L++R ++ +ELGLQT +E T+ LINRAH Y Y + V ++R+ +
Sbjct: 133 DCLPDDVVAYLADLNKRTYLWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHG--I 190
Query: 183 EIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLS 242
+ SH+INGLP E +DMM+E R V DIQGIK+HLLHL+ T M + Y +G+L LS
Sbjct: 191 RVCSHIINGLPLENYDMMMETARE-VAKLDIQGIKIHLLHLLKGTPMVKQYEKGQLEFLS 249
Query: 243 QEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSYQ 302
EDY+S++ DQLEIIP+ +++HRITGD P ++IGPMWSLNKWEVLN+ID E +R S+Q
Sbjct: 250 LEDYVSLVVDQLEIIPEDVIVHRITGDGPPDLMIGPMWSLNKWEVLNSIDAEFVRRGSWQ 309
Query: 303 G 303
G
Sbjct: 310 G 310
>gi|30022819|ref|NP_834450.1| Fe-S oxidoreductase [Bacillus cereus
ATCC 14579]
gi|29898378|gb|AAP11651.1| Fe-S oxidoreductase [Bacillus cereus
ATCC 14579]
Length = 319
Score = 331 bits (848), Expect = 1e-89
Identities = 158/301 (52%), Positives = 218/301 (71%), Gaps = 4/301 (1%)
Query: 3 KRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPI 62
KRY N + R FGEKIFK+ +DAGFDCPNRDGTVA GGCTFC+ +GSGD +
Sbjct: 14 KRYHTWNYHLRNEFGEKIFKVSLDAGFDCPNRDGTVAYGGCTFCSAAGSGDFAGDRRDDV 73
Query: 63 REQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRP 122
Q+++ + M KW + K + YFQ +TNTHA LE++KE++E + E V+G++I TRP
Sbjct: 74 ITQYHEMKEKMRSKWKD-GKCIAYFQAYTNTHAPLEVLKEKFEPLLAEKDVVGLSIATRP 132
Query: 123 DCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKV 182
DCLPD+ + YLA+L++R ++ +ELGLQT +E T+ LINRAH Y Y + V ++R+ +
Sbjct: 133 DCLPDDVVEYLADLNKRTYLWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHG--I 190
Query: 183 EIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLS 242
++ SH+INGLP E +DMM+E R V D+QGIK+HLLHL+ T M + Y +G+L LS
Sbjct: 191 KVCSHIINGLPLEDYDMMMETARE-VAKLDVQGIKIHLLHLLKGTPMVKQYEKGQLEFLS 249
Query: 243 QEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSYQ 302
EDY+S++ DQLE+IP+ +++HRITGD P ++IGPMWSLNKWEVLN+ID E +R S+Q
Sbjct: 250 LEDYVSLVVDQLEMIPEDVIVHRITGDGPPDLMIGPMWSLNKWEVLNSIDAEFVRRGSWQ 309
Query: 303 G 303
G
Sbjct: 310 G 310
>gi|15615846|ref|NP_244150.1| BH3284~unknown conserved protein
[Bacillus halodurans]
gi|25305768|pir||D84060 hypothetical protein BH3284 [imported] -
Bacillus halodurans (strain C-125)
gi|10175907|dbj|BAB07003.1| BH3284~unknown conserved protein
[Bacillus halodurans]
Length = 325
Score = 324 bits (830), Expect = 1e-87
Identities = 152/301 (50%), Positives = 214/301 (70%), Gaps = 4/301 (1%)
Query: 3 KRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPI 62
KRY + N + RE FGEK+FK+P+DAGFDCPNRDG VA GGCTFC+ GSGD + +
Sbjct: 19 KRYYSWNQHLREQFGEKVFKVPLDAGFDCPNRDGNVASGGCTFCSERGSGDFAGDRKDDL 78
Query: 63 REQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRP 122
QF+ + MH+KW KY+ YFQ +TNT+A +E ++E YE + + GV+G+ I TRP
Sbjct: 79 VTQFHTIKERMHKKWTS-GKYIGYFQAYTNTYAPVETLREYYEVILEQEGVVGLAIATRP 137
Query: 123 DCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKV 182
DCLPD+ + YLAEL++R ++ +ELGLQT +E T+ LINRAH Y Y V ++R+ +
Sbjct: 138 DCLPDDVVEYLAELNKRTYLWVELGLQTVHERTALLINRAHDYQCYVDGVNKLRKHG--I 195
Query: 183 EIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLS 242
+ SH+INGLP E H MM+E + V D+QGIK+H LHL+ T M + Y +G + +S
Sbjct: 196 RVCSHIINGLPLENHQMMMETAKE-VAKLDVQGIKIHSLHLLKRTPMVKQYEKGLVEFMS 254
Query: 243 QEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSYQ 302
E+Y++++ DQLE++P H++IHR+ GD P ++IGPMWS+ KWEVLNAI+ E+E+R S+Q
Sbjct: 255 LEEYVNLVVDQLEVLPPHMIIHRLMGDGPGDLMIGPMWSMKKWEVLNAIEAELERRDSWQ 314
Query: 303 G 303
G
Sbjct: 315 G 315
>gi|16803701|ref|NP_465186.1| similar to conserved hypothetical
proteins [Listeria monocytogenes EGD-e]
gi|25305778|pir||AE1282 conserved hypothetical proteins homolog
lmo1661 [imported] - Listeria monocytogenes (strain
EGD-e)
gi|16411097|emb|CAC99739.1| lmo1661 [Listeria monocytogenes]
Length = 321
Score = 323 bits (829), Expect = 2e-87
Identities = 155/301 (51%), Positives = 215/301 (70%), Gaps = 4/301 (1%)
Query: 3 KRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPI 62
KRY N RE FG+K +K+ +D GFDCPNRDGTVA GGCTFC+ +GSGD +
Sbjct: 14 KRYHTWNYCLREEFGQKTYKVALDGGFDCPNRDGTVAHGGCTFCSAAGSGDFAGNRALDL 73
Query: 63 REQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRP 122
+ QF + D M KW + K + YFQ FTNTHA + ++E++E +NEPGV+G++I TRP
Sbjct: 74 KIQFQQVRDKMQTKWKD-GKCIAYFQAFTNTHAPVAELREKFETVLNEPGVVGLSIATRP 132
Query: 123 DCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKV 182
DCLPD+ + YLAEL+ER ++ LELGLQ+ ++ T LINRAH YD Y + V+++++ +
Sbjct: 133 DCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRAHDYDCYVEGVRKLQK--HNI 190
Query: 183 EIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLS 242
I +H+INGLP ET +MM+E R+ V ++ + GIK+HLLHL+ T M DY +G L L+
Sbjct: 191 RICTHIINGLPKETPEMMMETTRK-VVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLT 249
Query: 243 QEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSYQ 302
++ Y++++ DQLEI+P +VIHRITGD LIGP+WSLNK+EVLNAID E+ +R S+Q
Sbjct: 250 RDGYVNLVADQLEILPPEMVIHRITGDGGVDDLIGPVWSLNKFEVLNAIDAELVRRDSWQ 309
Query: 303 G 303
G
Sbjct: 310 G 310
>gi|16800838|ref|NP_471106.1| similar to conserved hypothetical
proteins [Listeria innocua]
gi|25305780|pir||AI1653 conserved hypothetical protein homolog
lin1770 [imported] - Listeria innocua (strain Clip11262)
gi|16414257|emb|CAC97001.1| lin1770 [Listeria innocua]
Length = 321
Score = 322 bits (826), Expect = 4e-87
Identities = 154/301 (51%), Positives = 215/301 (71%), Gaps = 4/301 (1%)
Query: 3 KRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPI 62
KRY N RE FG+K +K+ +D GFDCPNRDGTVA GGCTFC+ +GSGD +
Sbjct: 14 KRYHTWNYCLREEFGQKTYKVALDGGFDCPNRDGTVAHGGCTFCSAAGSGDFAGNRALDL 73
Query: 63 REQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRP 122
+ QF + D M KW + K + YFQ FTNTHA + ++E++E +NEPGV+G++I TRP
Sbjct: 74 KVQFQQVRDKMQTKWKD-GKCIAYFQAFTNTHAPVAELREKFETVLNEPGVVGLSIATRP 132
Query: 123 DCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKV 182
DCLPD+ + YLAEL+ER ++ LELGLQ+ ++ T LINRAH YD Y + V+++++ +
Sbjct: 133 DCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRAHDYDCYLEGVRKLQK--HNI 190
Query: 183 EIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLS 242
I +H+INGLP ET +MM+E ++ V ++ + GIK+HLLHL+ T M DY +G L L+
Sbjct: 191 RICTHIINGLPKETPEMMMETAQK-VVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLT 249
Query: 243 QEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSYQ 302
++ Y++++ DQLEI+P +VIHRITGD LIGP+WSLNK+EVLNAID E+ +R S+Q
Sbjct: 250 RDGYVNLVADQLEILPPEMVIHRITGDGGVDDLIGPVWSLNKFEVLNAIDAELVRRDSWQ 309
Query: 303 G 303
G
Sbjct: 310 G 310
>gi|18311539|ref|NP_563473.1| conserved hypothetical protein
[Clostridium perfringens]
gi|18146223|dbj|BAB82263.1| conserved hypothetical protein
[Clostridium perfringens str. 13]
Length = 311
Score = 311 bits (796), Expect = 1e-83
Identities = 148/301 (49%), Positives = 209/301 (69%), Gaps = 4/301 (1%)
Query: 3 KRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPI 62
KRY +N + RE FGEK+FK+ +D GF CPNRDG VA+GGCTFC+ GSGD I
Sbjct: 10 KRYNTLNRFLREKFGEKVFKISLDGGFTCPNRDGKVAKGGCTFCSSKGSGDYAGQRTLSI 69
Query: 63 REQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRP 122
QF + M++KW E KY+ YFQ +TNT+A +E ++ +YE+AIN+ GV+ + IGTRP
Sbjct: 70 GTQFDNVKEMMNKKWKE-GKYIAYFQAYTNTYAPVEELRRKYEEAINKEGVVALAIGTRP 128
Query: 123 DCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKV 182
DC+ +E + L E++++++ +ELGLQT ++ T+ NR + +++ K ++ ++ +
Sbjct: 129 DCINEEVLDLLEEMNKKVYTWVELGLQTIHDDTARSFNRGYDLEVFDKAMEGLKSRG--I 186
Query: 183 EIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLS 242
+ V H I GLPGE+ + M+E V V+ QGIKLHLLHLM TRM +DY EGRL+ L+
Sbjct: 187 DTVVHCIFGLPGESKEQMLETVDY-VSRCGAQGIKLHLLHLMEGTRMVKDYEEGRLKFLT 245
Query: 243 QEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSYQ 302
QE+Y+ +IC + IP+++VIHR+TGDAPR +LIGPMWSL KWEVLNAID +E YQ
Sbjct: 246 QEEYVDLICTAISRIPQNMVIHRLTGDAPRQLLIGPMWSLKKWEVLNAIDNALEDNDIYQ 305
Query: 303 G 303
G
Sbjct: 306 G 306
>gi|28209949|ref|NP_780893.1| Fe-S oxidoreductase [Clostridium
tetani E88]
gi|28202384|gb|AAO34830.1| Fe-S oxidoreductase [Clostridium tetani
E88]
Length = 314
Score = 308 bits (789), Expect = 8e-83
Identities = 145/307 (47%), Positives = 217/307 (70%), Gaps = 4/307 (1%)
Query: 3 KRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPI 62
KRY +N + RE FGEK+FK+ +DAGF CPNRDGT++ GGC FC+ GSGD I
Sbjct: 8 KRYHTLNYFLREKFGEKVFKISLDAGFSCPNRDGTISSGGCLFCSERGSGDFAGNRHFSI 67
Query: 63 REQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRP 122
+ QF + M +KW + +KY+ YFQ +TNT+A +EI+KE+YE+A+ + GV+G+ I TRP
Sbjct: 68 KAQFEEIKSVMRKKW-KGDKYIAYFQAYTNTYAPVEILKEKYEEALMQEGVVGLAIATRP 126
Query: 123 DCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKV 182
DCL +E + L+E++++ ++ +ELGLQTT + + +INR + +++K +K +R + +
Sbjct: 127 DCLDEEVLNLLSEINKKTYLWIELGLQTTNDRVAKIINRGYELTVFEKALKELR--SRDI 184
Query: 183 EIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLS 242
++V H I GLPGET + M+ V+ +++ DIQG+K+HLLHLM T + Y G L+ L+
Sbjct: 185 DVVVHTIFGLPGETKEDMINTVKY-LSNKDIQGLKIHLLHLMEGTPLVNTYENGDLKFLT 243
Query: 243 QEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSYQ 302
+E+YI I+C+ + II IVIHR+TGD+PR +LIGP WSL KWE+LN+ID+E++ R YQ
Sbjct: 244 EEEYIDIVCESIAIIRDDIVIHRLTGDSPRDLLIGPKWSLKKWEILNSIDRELQDRNIYQ 303
Query: 303 GCKAEVK 309
G K + K
Sbjct: 304 GMKYKDK 310
>gi|15896484|ref|NP_349833.1| Ucharacterized Fe-S oxidoreductase
[Clostridium acetobutylicum]
gi|25305772|pir||B97298 ucharacterized Fe-S oxidoreductase CAC3238
[imported] - Clostridium acetobutylicum
gi|15026311|gb|AAK81173.1|AE007819_9 Ucharacterized Fe-S
oxidoreductase [Clostridium acetobutylicum]
Length = 324
Score = 289 bits (739), Expect = 5e-77
Identities = 138/301 (45%), Positives = 202/301 (66%), Gaps = 4/301 (1%)
Query: 3 KRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPI 62
K Y ++N + RE F +K+FK+ +DAGF CPNRDGT++RGGC FC+ GSGD + I
Sbjct: 19 KPYYSLNYFLREKFQDKVFKISLDAGFSCPNRDGTISRGGCMFCSERGSGDFAGNRKFSI 78
Query: 63 REQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRP 122
QF D M KW KY+ YFQ +TNT+A +++++E+Y +AI++ GV+G+ I TRP
Sbjct: 79 STQFEDIKDMMKNKWKN-GKYIAYFQAYTNTYAPIKVLREKYSEAISKDGVVGLAIATRP 137
Query: 123 DCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKV 182
DCL +E + + E S+R++V +ELGLQT + + +INR + ++ VK++RE K+
Sbjct: 138 DCLSEEVLDLIQEFSKRIYVWVELGLQTANDKVAKVINRGYDTIVFDDAVKKLRE--RKI 195
Query: 183 EIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLS 242
++V H I GLPGE M+ + V ++QGIK+HLLHLM T + Y+ G+L +S
Sbjct: 196 DVVVHTIFGLPGEKPKDMLSTIDY-VAHKEVQGIKIHLLHLMRGTPLVELYNNGQLTFMS 254
Query: 243 QEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSYQ 302
+E+Y+ +C + ++P++IVIHR+TGDAPR +LI P WSL KWEVLN+ID M K YQ
Sbjct: 255 EEEYVETVCRAITMLPQNIVIHRLTGDAPRDLLIEPKWSLKKWEVLNSIDNSMRKNNLYQ 314
Query: 303 G 303
G
Sbjct: 315 G 315
>gi|23111943|ref|ZP_00097500.1| hypothetical protein
[Desulfitobacterium hafniense]
Length = 297
Score = 285 bits (728), Expect = 1e-75
Identities = 135/291 (46%), Positives = 200/291 (68%), Gaps = 4/291 (1%)
Query: 19 KIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHRKWP 78
K ++ +DAGF CPNRDG V +GGC +C+ GSGD E I EQF + + M+RKW
Sbjct: 3 KCSRVSLDAGFTCPNRDGRVGQGGCIYCSARGSGDFAGQAEKSIHEQFCEIKEVMNRKWS 62
Query: 79 EVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAELSE 138
+YL YFQ +TNT+A L+ ++E YEQA+ E GV+G++I TRPDCLP E + YL EL++
Sbjct: 63 SA-RYLAYFQAYTNTYAPLKRLQEVYEQALAEEGVVGLSIATRPDCLPAEVLDYLEELNQ 121
Query: 139 RMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPGETHD 198
R ++ +ELGLQ+ ++ T + R H+++ + + + ++R + + +H+I GLPGET +
Sbjct: 122 RTYLWVELGLQSIHDRTMEWVGRGHTFEDFLQGLDKLRR--RNIRVCTHMIYGLPGETLE 179
Query: 199 MMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLSQEDYISIICDQLEIIP 258
M + + + D+QG+KLHLLH++ T + Y + LLSQ++YI +ICD LEI+P
Sbjct: 180 DMFGSA-QTLAKLDVQGVKLHLLHVLKGTPLADIYEQSPFPLLSQDEYIHLICDTLEILP 238
Query: 259 KHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSYQGCKAEVK 309
VIHR+TGDAPR L+ P+WSL KWE+LNAID+E+E+R ++QG KA+ K
Sbjct: 239 AQTVIHRLTGDAPRKDLLAPLWSLKKWEILNAIDRELERRGTWQGKKAQNK 289
>gi|15902613|ref|NP_358163.1| Hypothetical protein [Streptococcus
pneumoniae R6]
gi|25508375|pir||A97943 hypothetical protein spr0569 [imported] -
Streptococcus pneumoniae (strain R6)
gi|15458148|gb|AAK99373.1| Hypothetical protein [Streptococcus
pneumoniae R6]
Length = 206
Score = 271 bits (694), Expect = 8e-72
Identities = 124/146 (84%), Positives = 134/146 (90%)
Query: 3 KRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPI 62
K Y +NDYYR+LFGEK FK+PIDA FDCPNRDGTVA GGCTFCTVSGSGD IVAP+API
Sbjct: 61 KSYNTLNDYYRKLFGEKTFKVPIDAEFDCPNRDGTVAHGGCTFCTVSGSGDTIVAPDAPI 120
Query: 63 REQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRP 122
REQFYKEIDFMHRKWP+V KYLVYFQNFTNTH K+E+I+ERYEQAINEPGV+GINIG RP
Sbjct: 121 REQFYKEIDFMHRKWPDVQKYLVYFQNFTNTHEKVEVIRERYEQAINEPGVVGINIGMRP 180
Query: 123 DCLPDETIYYLAELSERMHVTLELGL 148
DCLPDETI YLAELSE MHVT+ELGL
Sbjct: 181 DCLPDETIEYLAELSECMHVTVELGL 206
>gi|23054734|ref|ZP_00080881.1| hypothetical protein [Geobacter
metallireducens]
Length = 310
Score = 246 bits (629), Expect = 3e-64
Identities = 123/302 (40%), Positives = 183/302 (59%), Gaps = 4/302 (1%)
Query: 2 KKRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAP 61
++RY A +D R +FG ++ ++ +DAGF CPNRDG V GGC FC GSG + PE
Sbjct: 3 ERRYTAFSDELRHIFGCRVQRISVDAGFTCPNRDGAVGTGGCIFCGGKGSGSFGIRPELS 62
Query: 62 IREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTR 121
+ Q +F+ R++ K+L YFQ ++NT+A +E ++ YE+A+ V G+ +GTR
Sbjct: 63 VTRQLLHGKEFLARRYGAA-KFLAYFQAYSNTYAPVERLRLLYEEALAVSDVAGLIVGTR 121
Query: 122 PDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPK 181
PDCLP E + LA + R + LELGLQ+ + T ALINR H + + V RE
Sbjct: 122 PDCLPSEVLDLLAGYARRTYFWLELGLQSPLDRTLALINRGHDFAAFADAVVWSRERG-- 179
Query: 182 VEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLL 241
+ + +H+I GLPGE+ + M+ + ++G+KLH LH+M T ++ Y G +R L
Sbjct: 180 IRVCAHVILGLPGESREEMLATA-EILNGLGVEGVKLHQLHVMKGTVLEEMYRRGEVRCL 238
Query: 242 SQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSY 301
++ Y+ I+CD LE + IVIHR+ GDAP L+ P WSL K EVL+A+D E+ +R +
Sbjct: 239 ERDAYVDIVCDFLERLDPRIVIHRLVGDAPADHLVAPDWSLRKGEVLDAVDAELTRRVTR 298
Query: 302 QG 303
QG
Sbjct: 299 QG 300
>gi|19704477|ref|NP_604039.1| Oxygen-independent coproporphyrinogen
III oxidase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19714747|gb|AAL95338.1| Oxygen-independent coproporphyrinogen
III oxidase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 304
Score = 241 bits (616), Expect = 9e-63
Identities = 118/306 (38%), Positives = 200/306 (64%), Gaps = 10/306 (3%)
Query: 1 MKKRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEA 60
M ++ +ND+ +E F EKI+K+ +D GF CPNRDG ++GGC FC+ +GSGD
Sbjct: 1 MIRKIYTLNDFLKEKFNEKIYKVSLDGGFTCPNRDGKFSKGGCIFCSENGSGDFTSGKLK 60
Query: 61 PIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGT 120
I +Q ++++ + +K+ + +KY+ YFQNFTNT+A + +++ YE+A++ ++G+ I T
Sbjct: 61 SIHQQIDEQVELVSKKY-KGDKYIAYFQNFTNTYADINYLRKIYEEALSHKNIVGLAIAT 119
Query: 121 RPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAP 180
RPDCL D+ + L EL+++ + +ELGLQT + + NRA+ +Y++ +++ +L
Sbjct: 120 RPDCLEDDILKLLDELNKKTFLWIELGLQTINDKVAKYFNRAYETKIYEEASQKLNKL-- 177
Query: 181 KVEIVSHLINGLPGETHDMMVENV---RRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGR 237
++ V+H+I GLP E D ++ + C T G+KLHL++++ NT +++ Y G
Sbjct: 178 NIKFVTHIIIGLPKEKKDDYLKTAIFSQNCGT----WGLKLHLMYVVKNTPLEKLYQSGN 233
Query: 238 LRLLSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEK 297
L++ ++E+YI I + LE I IVIHR+TGD R L+ P+WS+ K +VLN+I KE++K
Sbjct: 234 LKVHTKEEYIEKIVNILENISPEIVIHRMTGDGNRETLVAPLWSIKKIDVLNSIHKELKK 293
Query: 298 RQSYQG 303
+ +YQG
Sbjct: 294 QNTYQG 299
>gi|21402795|ref|NP_658780.1| Biotin_synth, Biotin synthase
[Bacillus anthracis A2012]
Length = 257
Score = 236 bits (601), Expect = 5e-61
Identities = 117/228 (51%), Positives = 159/228 (69%), Gaps = 4/228 (1%)
Query: 3 KRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPI 62
KRY N + R FGEKIFK+ +DAGFDCPNRDGTVA GGCTFC+ +GSGD +
Sbjct: 14 KRYHTWNYHLRNEFGEKIFKVSLDAGFDCPNRDGTVAYGGCTFCSAAGSGDFAGDRRDDV 73
Query: 63 REQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRP 122
Q+++ + M KW + K + YFQ +TNTHA LE++KE++E + E V+G++I TRP
Sbjct: 74 ITQYHEMKEKMRSKWKD-GKCIAYFQAYTNTHAPLEVLKEKFEPLLAEKDVVGLSIATRP 132
Query: 123 DCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKV 182
DCLPD+ + YLA+L++R ++ +ELGLQT +E T+ LINRAH Y Y + V ++R+ +
Sbjct: 133 DCLPDDVVAYLADLNKRTYLWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHG--I 190
Query: 183 EIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQ 230
+ SH+INGLP E +DMM+E R V DIQGIK+HLLHL+ T MQ
Sbjct: 191 RVCSHIINGLPLENYDMMMETARE-VAKLDIQGIKIHLLHLLKGTPMQ 237
>gi|15902614|ref|NP_358164.1| Hypothetical protein [Streptococcus
pneumoniae R6]
gi|25508377|pir||B97943 hypothetical protein spr0570 [imported] -
Streptococcus pneumoniae (strain R6)
gi|15458149|gb|AAK99374.1| Hypothetical protein [Streptococcus
pneumoniae R6]
Length = 148
Score = 232 bits (591), Expect = 7e-60
Identities = 112/137 (81%), Positives = 127/137 (91%), Gaps = 1/137 (0%)
Query: 170 KTVKRIRELAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRM 229
+TVKR+R+ PK+EIVSHLINGLPGETH+MMVENVRRCVT+NDIQGIKLHLLHLMTNTRM
Sbjct: 2 ETVKRLRKY-PKIEIVSHLINGLPGETHEMMVENVRRCVTNNDIQGIKLHLLHLMTNTRM 60
Query: 230 QRDYHEGRLRLLSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLN 289
QRDYHEGRL+L+SQ++Y+ +ICDQLEIIPKHIVIHRITGDAPR MLIG MWSLNKWE LN
Sbjct: 61 QRDYHEGRLQLMSQDEYVRVICDQLEIIPKHIVIHRITGDAPRDMLIGLMWSLNKWEALN 120
Query: 290 AIDKEMEKRQSYQGCKA 306
+I+ EM +R S QGCKA
Sbjct: 121 SIEMEMRRRGSVQGCKA 137
>gi|23054553|ref|ZP_00080700.1| hypothetical protein [Geobacter
metallireducens]
Length = 319
Score = 219 bits (557), Expect = 6e-56
Identities = 110/302 (36%), Positives = 174/302 (57%), Gaps = 4/302 (1%)
Query: 4 RYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIR 63
R+ + Y R FG ++ K+ +D GF CPNRDGT GGC +C + E PI
Sbjct: 11 RFNSYGTYLRRRFGCRVSKVNVDGGFTCPNRDGTRGTGGCIYCDNASFSPGGTVAEIPIE 70
Query: 64 EQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPD 123
Q + + + HR+ K++VYFQ FTNT+A +E +++ Y +A+ P VIGI++GTRPD
Sbjct: 71 IQMAEGMAY-HRRRLGSEKFIVYFQKFTNTYAPVERLRDLYARALAHPDVIGISVGTRPD 129
Query: 124 CLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVE 183
L DE + LA+L++R +V +ELGLQ+ + I R H+ Y + V RI +E
Sbjct: 130 SLSDEALDLLADLAKRHYVCIELGLQSMDDKILQQIGRGHTLTEYLEAVARIE--GRGIE 187
Query: 184 IVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLSQ 243
+ +HLI G PGET D + + + +K+H LH + TR+ YH+G ++
Sbjct: 188 LCTHLIYGFPGETRDGFLRTADM-MAGLPVNSVKIHQLHAVKGTRLAELYHQGDFVPITH 246
Query: 244 EDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSYQG 303
++Y++ CD LEI+P I I R+ G AP + + P W+L ++ +I E+++R ++QG
Sbjct: 247 QEYVATACDFLEILPPRIAIQRLYGSAPLTIRVAPTWNLKNNQMWFSIVNELKRRGTWQG 306
Query: 304 CK 305
C+
Sbjct: 307 CR 308
>gi|15642368|ref|NP_232001.1| conserved hypothetical protein [Vibrio
cholerae]
gi|11278817|pir||C82085 conserved hypothetical protein VC2371
[imported] - Vibrio cholerae (strain N16961 serogroup
O1)
gi|9656941|gb|AAF95514.1| conserved hypothetical protein [Vibrio
cholerae]
Length = 316
Score = 218 bits (556), Expect = 8e-56
Identities = 112/286 (39%), Positives = 172/286 (59%), Gaps = 15/286 (5%)
Query: 16 FGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHR 75
+GEK+ KL + GF CPNRDGT+ RGGCTFC V+ D ++ I+ Q + R
Sbjct: 22 YGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADENTQQQS-IQAQLKDRAGEIKR 80
Query: 76 KWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAE 135
KYL YFQ +T+T+A+++++K YEQA+ E ++G+ +GTRPDC+PD + LA+
Sbjct: 81 ----AKKYLAYFQAYTSTYAEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLKLLAD 136
Query: 136 -LSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPG 194
+ + + LELGLQT ++ T INR H + Y + + R L +++ +HLI GLPG
Sbjct: 137 YVQQGYEIWLELGLQTAHDQTLKRINRGHDFACYAEITAKARALG--IKVCTHLIVGLPG 194
Query: 195 E--THDM-MVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLSQEDYISIIC 251
E T ++ ++ V + TD GIKLH LH++ + M + + GRL +L Q+ Y+SI C
Sbjct: 195 EERTENLTTLQQVLKVGTD----GIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSIAC 250
Query: 252 DQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEK 297
+ + P IV HR++ A R L+ P+W N+W + AI + +EK
Sbjct: 251 EMIRSTPPEIVYHRVSSAARRPTLLAPLWCENRWWAMTAIGQRLEK 296
>gi|28897259|ref|NP_796864.1| conserved hypothetical protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|28805468|dbj|BAC58748.1| conserved hypothetical protein [Vibrio
parahaemolyticus]
Length = 319
Score = 212 bits (539), Expect = 7e-54
Identities = 106/283 (37%), Positives = 168/283 (58%), Gaps = 9/283 (3%)
Query: 16 FGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHR 75
+GEK+ KL + GF CPNRDGT+ RGGCTFC V+ D V ++ I EQ +HR
Sbjct: 18 YGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEEVQIKS-IHEQLKDRAGEIHR 76
Query: 76 KWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAE 135
KYL YFQ +T+T+A+++++K YE+A+ ++G+ +GTRPDC+PD + L++
Sbjct: 77 ----AKKYLAYFQAYTSTYAEVQVLKNMYEEALKAADIVGLCVGTRPDCVPDSVLDLLSD 132
Query: 136 -LSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPG 194
+++ + LELGLQT T INR H ++ Y + +R R L +++ +HLI GLP
Sbjct: 133 YVNQGYEIWLELGLQTANNDTLKRINRGHDFECYAEITQRARALG--IKVCTHLIVGLPK 190
Query: 195 ETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLSQEDYISIICDQL 254
ET D +E +++ V GIKLH LH++ + M + + GRL E+Y++I + +
Sbjct: 191 ETRDDNIETLQK-VLAVGTDGIKLHGLHIVEGSTMAKAWRAGRLEAPGLEEYVAIASEMI 249
Query: 255 EIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEK 297
+ P +V HR++ A R L+ P+W N+W + I + + K
Sbjct: 250 RMTPADVVFHRVSSAARRPTLLSPLWCENRWLAMTEIGRALNK 292
>gi|22124047|ref|NP_667470.1| hypothetical protein [Yersinia pestis
KIM]
gi|21956793|gb|AAM83721.1|AE013613_1 hypothetical protein [Yersinia
pestis KIM]
Length = 329
Score = 209 bits (532), Expect = 5e-53
Identities = 106/278 (38%), Positives = 163/278 (58%), Gaps = 9/278 (3%)
Query: 16 FGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHR 75
+GEKI KL + GF CPNRDGT+ RGGCTFC V+ D E ++ +++ +
Sbjct: 40 YGEKIHKLTLHGGFSCPNRDGTLGRGGCTFCQVASFAD-----EQMQQQSITQQLAIQAK 94
Query: 76 KWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAE 135
K N+YL YFQ +T+T+A++ + Y+QA+ E ++G+ +GTRPDC+PD + L+
Sbjct: 95 KANRANRYLAYFQAYTSTYAEVNALAAMYQQALCEADIVGLCVGTRPDCVPDAVLDLLSS 154
Query: 136 LSERMH-VTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPG 194
++ + V LELGLQT + T INR H + Y++T +R R A +++ HLI GLPG
Sbjct: 155 YQQQGYEVWLELGLQTANDKTLKRINRGHDFACYQQTARRAR--ARGLKVCCHLIVGLPG 212
Query: 195 ETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLSQEDYISIICDQL 254
E E + + VT + GIKLH LH++ + M + + GRL L+ EDY+ + +
Sbjct: 213 EDRAQGRETLEKVVT-TGVDGIKLHPLHIVEGSTMAKAWRAGRLTALALEDYVLTAGEMI 271
Query: 255 EIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAID 292
P +V HRI+ A R L+ P+W N+W +N ++
Sbjct: 272 RHTPAEVVYHRISASARRPTLLAPLWCENRWTGMNELN 309
>gi|27364014|ref|NP_759542.1| Predicted Fe-S oxidoreductase [Vibrio
vulnificus CMCP6]
gi|27360131|gb|AAO09069.1|AE016798_229 Predicted Fe-S
oxidoreductase [Vibrio vulnificus CMCP6]
Length = 318
Score = 208 bits (530), Expect = 8e-53
Identities = 104/277 (37%), Positives = 162/277 (57%), Gaps = 9/277 (3%)
Query: 16 FGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHR 75
+GEK+ KL + GF CPNRDGT+ RGGCTFC V+ D A IREQ + +HR
Sbjct: 18 YGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADE-QAQVKSIREQLTERAGEVHR 76
Query: 76 KWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAE 135
KYL YFQ +T+T+A+++++K YE+A+ ++G+ +GTRPDC+PD + L++
Sbjct: 77 ----AKKYLAYFQAYTSTYAEVQVLKNMYEEALKAADIVGLCVGTRPDCVPDAVLDLLSD 132
Query: 136 -LSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPG 194
+ + + LELGLQT +T INR H ++ Y + +R R L +++ +HLI GLP
Sbjct: 133 YVQQGYEIWLELGLQTASNSTLKRINRGHDFECYAEITQRARALG--IKVCTHLIVGLPK 190
Query: 195 ETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLSQEDYISIICDQL 254
E+ D + + V + GIKLH LH++ + M + + G+L E Y+ I C+ +
Sbjct: 191 ESRDDNFATLEK-VIEVGADGIKLHGLHIVEGSTMAKAWRAGKLDAPELEQYVEIACEMI 249
Query: 255 EIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAI 291
P ++ HR++ A R L+ P+W N+W + AI
Sbjct: 250 RRTPPEVIFHRVSSAARRPTLLSPLWCENRWLAMTAI 286
>gi|16123700|ref|NP_407013.1| conserved hypothetical protein
[Yersinia pestis]
gi|25305775|pir||AE0432 conserved hypothetical protein YPO3556
[imported] - Yersinia pestis (strain CO92)
gi|15981478|emb|CAC92785.1| conserved hypothetical protein
[Yersinia pestis CO92]
Length = 307
Score = 208 bits (529), Expect = 1e-52
Identities = 106/278 (38%), Positives = 163/278 (58%), Gaps = 9/278 (3%)
Query: 16 FGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHR 75
+GEKI KL + GF CPNRDGT+ RGGCTFC V+ D E ++ +++ +
Sbjct: 18 YGEKIHKLTLHGGFSCPNRDGTLGRGGCTFCQVASFAD-----EQMQQQSITQQLAIQAK 72
Query: 76 KWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAE 135
K N+YL YFQ +T+T+A++ + Y+QA+ E ++G+ +GTRPDC+PD + L+
Sbjct: 73 KANRANRYLAYFQAYTSTYAEVNALAAMYQQALCEADIVGLCVGTRPDCVPDAVLDLLSS 132
Query: 136 LSERMH-VTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPG 194
++ + V LELGLQT + T INR H + Y++T +R R A +++ HLI GLPG
Sbjct: 133 YQQQGYEVWLELGLQTANDKTLKRINRGHDFACYQQTARRAR--ARGLKVCCHLIVGLPG 190
Query: 195 ETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLSQEDYISIICDQL 254
E E + + VT + GIKLH LH++ + M + + GRL L+ EDY+ + +
Sbjct: 191 EDRAQGRETLEKVVT-TGVDGIKLHPLHIVEGSTMAKAWRAGRLTALALEDYVLTAGEMI 249
Query: 255 EIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAID 292
P +V HRI+ A R L+ P+W N+W +N ++
Sbjct: 250 RHTPAEVVYHRISASARRPTLLAPLWCENRWTGMNELN 287
>gi|24114499|ref|NP_709009.1| orf, conserved hypothetical protein
[Shigella flexneri 2a str. 301]
gi|24053685|gb|AAN44716.1|AE015336_2 orf, conserved hypothetical
protein [Shigella flexneri 2a str. 301]
Length = 320
Score = 207 bits (527), Expect = 2e-52
Identities = 103/283 (36%), Positives = 166/283 (58%), Gaps = 9/283 (3%)
Query: 16 FGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHR 75
+G+K+ KL + GF CPNRDGT+ RGGCTFC V+ D I EQ + + ++R
Sbjct: 29 YGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADE-AQQHRSIAEQLAHQANLVNR 87
Query: 76 KWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAE 135
+YL YFQ +T+T A++++++ Y+QA+++ ++G+ +GTRPDC+PD + L E
Sbjct: 88 ----AKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPDCVPDAVLDLLCE 143
Query: 136 LSERMH-VTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPG 194
++ + V LELGLQT ++ T INR H + Y++T + R+ KV SHLI GLPG
Sbjct: 144 YKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKV--CSHLIVGLPG 201
Query: 195 ETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLSQEDYISIICDQL 254
E ++ + R V + + GIKLH LH++ + M + + GRL + EDY + +
Sbjct: 202 EGQAECLQTLER-VVETSVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDYTLTAGEMI 260
Query: 255 EIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEK 297
P ++ HRI+ A R L+ P+W N+W + +D+ + +
Sbjct: 261 RHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNE 303
>gi|30064548|ref|NP_838719.1| hypothetical protein [Shigella
flexneri 2a str. 2457T]
gi|30042807|gb|AAP18530.1| hypothetical protein [Shigella flexneri
2a str. 2457T]
Length = 309
Score = 206 bits (525), Expect = 3e-52
Identities = 103/283 (36%), Positives = 166/283 (58%), Gaps = 9/283 (3%)
Query: 16 FGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHR 75
+G+K+ KL + GF CPNRDGT+ RGGCTFC V+ D I EQ + + ++R
Sbjct: 18 YGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADE-AQQHRSIAEQLAHQANLVNR 76
Query: 76 KWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAE 135
+YL YFQ +T+T A++++++ Y+QA+++ ++G+ +GTRPDC+PD + L E
Sbjct: 77 ----AKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPDCVPDAVLDLLCE 132
Query: 136 LSERMH-VTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPG 194
++ + V LELGLQT ++ T INR H + Y++T + R+ KV SHLI GLPG
Sbjct: 133 YKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKV--CSHLIVGLPG 190
Query: 195 ETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLSQEDYISIICDQL 254
E ++ + R V + + GIKLH LH++ + M + + GRL + EDY + +
Sbjct: 191 EGQAECLQTLER-VVETSVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDYTLTAGEMI 249
Query: 255 EIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEK 297
P ++ HRI+ A R L+ P+W N+W + +D+ + +
Sbjct: 250 RHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNE 292
>gi|15803751|ref|NP_289785.1| orf, hypothetical protein [Escherichia
coli O157:H7 EDL933]
gi|15833344|ref|NP_312117.1| hypothetical protein [Escherichia coli
O157:H7]
gi|16131101|ref|NP_417678.1| hypothetical protein [Escherichia coli
K12]
gi|2851640|sp|P45476|YHCC_ECOLI Hypothetical protein yhcC
gi|7429931|pir||E65112 hypothetical 34.6 kD protein in arcB-gltB
intergenic region - Escherichia coli (strain K-12)
gi|25305765|pir||B91140 hypothetical protein ECs4090 [imported] -
Escherichia coli (strain O157:H7, substrain RIMD
0509952)
gi|25305771|pir||E85985 hypothetical protein yhcC [imported] -
Escherichia coli (strain O157:H7, substrain EDL933)
gi|2367204|gb|AAC76243.1| orf, hypothetical protein [Escherichia
coli K12]
gi|12517832|gb|AAG58345.1|AE005549_2 orf, hypothetical protein
[Escherichia coli O157:H7 EDL933]
gi|13363563|dbj|BAB37513.1| hypothetical protein [Escherichia coli
O157:H7]
Length = 309
Score = 206 bits (525), Expect = 3e-52
Identities = 103/283 (36%), Positives = 166/283 (58%), Gaps = 9/283 (3%)
Query: 16 FGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHR 75
+G+K+ KL + GF CPNRDGT+ RGGCTFC V+ D I EQ + + ++R
Sbjct: 18 YGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADE-AQQHRSIAEQLAHQANLVNR 76
Query: 76 KWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAE 135
+YL YFQ +T+T A++++++ Y+QA+++ ++G+ +GTRPDC+PD + L E
Sbjct: 77 ----AKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPDCVPDAVLDLLCE 132
Query: 136 LSERMH-VTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPG 194
++ + V LELGLQT ++ T INR H + Y++T + R+ KV SHLI GLPG
Sbjct: 133 YKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKV--CSHLIVGLPG 190
Query: 195 ETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLSQEDYISIICDQL 254
E ++ + R V + + GIKLH LH++ + M + + GRL + EDY + +
Sbjct: 191 EGQAECLQTLER-VVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDYTLTAGEMI 249
Query: 255 EIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEK 297
P ++ HRI+ A R L+ P+W N+W + +D+ + +
Sbjct: 250 RHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNE 292
>gi|606150|gb|AAA58013.1| ORF_f309 [Escherichia coli]
Length = 309
Score = 206 bits (524), Expect = 4e-52
Identities = 103/283 (36%), Positives = 166/283 (58%), Gaps = 9/283 (3%)
Query: 16 FGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHR 75
+G+K+ KL + GF CPNRDGT+ RGGCTFC V+ D I EQ + + ++R
Sbjct: 18 YGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADE-AHEHRSIAEQLAHQANLVNR 76
Query: 76 KWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAE 135
+YL YFQ +T+T A++++++ Y+QA+++ ++G+ +GTRPDC+PD + L E
Sbjct: 77 ----AKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPDCVPDAVLDLLCE 132
Query: 136 LSERMH-VTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPG 194
++ + V LELGLQT ++ T INR H + Y++T + R+ KV SHLI GLPG
Sbjct: 133 YKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKV--CSHLIVGLPG 190
Query: 195 ETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLSQEDYISIICDQL 254
E ++ + R V + + GIKLH LH++ + M + + GRL + EDY + +
Sbjct: 191 EGQAECLQTLER-VVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDYTLTAGEMI 249
Query: 255 EIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEK 297
P ++ HRI+ A R L+ P+W N+W + +D+ + +
Sbjct: 250 RHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNE 292
>gi|16762091|ref|NP_457708.1| conserved hypothetical protein
[Salmonella enterica subsp. enterica serovar Typhi]
gi|16766624|ref|NP_462239.1| putative FeS oxidoreductase
[Salmonella typhimurium LT2]
gi|29143580|ref|NP_806922.1| conserved hypothetical protein
[Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|25305777|pir||AH0906 conserved hypothetical protein STY3508
[imported] - Salmonella enterica subsp. enterica serovar
Typhi (strain CT18)
gi|16421887|gb|AAL22198.1| putative FeS oxidoreductase [Salmonella
typhimurium LT2]
gi|16504394|emb|CAD07846.1| conserved hypothetical protein
[Salmonella enterica subsp. enterica serovar Typhi]
gi|29139215|gb|AAO70782.1| conserved hypothetical protein
[Salmonella enterica subsp. enterica serovar Typhi Ty2]
Length = 309
Score = 204 bits (518), Expect = 2e-51
Identities = 102/283 (36%), Positives = 164/283 (57%), Gaps = 9/283 (3%)
Query: 16 FGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHR 75
+G+K+ KL + GF CPNRDGT+ RGGCTFC V+ D I EQ + ++R
Sbjct: 18 YGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADE-AQQHHSIAEQLAHQAHLVNR 76
Query: 76 KWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAE 135
+YL YFQ +T+T A++++++ Y+QA+++ ++G+ +GTRPDC+P + L E
Sbjct: 77 ----AKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQASIVGLCVGTRPDCVPQAVVDLLCE 132
Query: 136 LSERMH-VTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPG 194
++ + V LELGLQT ++ T INR H + Y++T + RE KV +HLI GLPG
Sbjct: 133 YKDQGYEVWLELGLQTAHDKTLRRINRGHDFACYQRTTRIARERGLKV--CAHLIVGLPG 190
Query: 195 ETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLSQEDYISIICDQL 254
E ++ + R V + + GIKLH LH++ + M + + GRL + +DY + +
Sbjct: 191 EGQAECLQTMER-VVETGVDGIKLHPLHIVKGSTMAKAWEAGRLNGIELDDYTLTAGEMI 249
Query: 255 EIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEK 297
P ++ HRI+ A R L+ P+W N+W + +DK + +
Sbjct: 250 RHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDKYLNE 292
>gi|15606062|ref|NP_213439.1| hypothetical protein [Aquifex
aeolicus]
gi|7429929|pir||C70356 conserved hypothetical protein aq_632 -
Aquifex aeolicus
gi|2983247|gb|AAC06843.1| hypothetical protein [Aquifex aeolicus
VF5]
Length = 317
Score = 203 bits (516), Expect = 4e-51
Identities = 105/307 (34%), Positives = 183/307 (59%), Gaps = 7/307 (2%)
Query: 2 KKRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAP 61
++ Y ++ DY++E +G+++ K+ + F CPNRDGT RGGCT+C GS ++++P P
Sbjct: 7 QRLYYSLKDYFKEKYGKRVQKITVALPFTCPNRDGTKGRGGCTYC-YDGSKPSMLSPVIP 65
Query: 62 IREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTR 121
+ Q + I+ +K+ E + +Y+Q++TNT+A +E +K+ Y+ A+ GV+GI++GTR
Sbjct: 66 LEVQIKEGIERAKKKYGEDIYFTIYYQSYTNTYADIETLKKVYDTALKFEGVVGIDVGTR 125
Query: 122 PDCLPDETIYYLAELSER-MHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAP 180
PDC P+E + L + + + V +E GLQ+ T INR H + V R ++
Sbjct: 126 PDCAPEEVLDLLEYYANKGLEVWVEYGLQSANFETLKKINRQHGVSDFVDAVLRTKK--R 183
Query: 181 KVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRL 240
+++ +H+I GLPGET + +E + + I GIK+H LH++ T M++ Y +
Sbjct: 184 NLKVCAHMIIGLPGETREDFIETA-KLIASLPIDGIKIHPLHVIKGTVMEKQYLNEEFKT 242
Query: 241 LSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWE--VLNAIDKEMEKR 298
L+ E+Y D +E++P +V+HRITG+ LI P W K++ V+ + + +E+R
Sbjct: 243 LTLEEYAEYCADVIELLPPDMVVHRITGETDEERLIAPEWCTFKYKNAVIQKVRETLERR 302
Query: 299 QSYQGCK 305
+YQG +
Sbjct: 303 GTYQGAR 309
>gi|26249797|ref|NP_755837.1| Hypothetical protein yhcC [Escherichia
coli CFT073]
gi|26110225|gb|AAN82411.1|AE016767_171 Hypothetical protein yhcC
[Escherichia coli CFT073]
Length = 288
Score = 202 bits (513), Expect = 7e-51
Identities = 102/277 (36%), Positives = 161/277 (57%), Gaps = 9/277 (3%)
Query: 22 KLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHRKWPEVN 81
KL + GF CPNRDGT+ RGGCTFC V+ D I EQ + + ++R
Sbjct: 3 KLTLHGGFSCPNRDGTIGRGGCTFCNVASFADE-AQQHRSIAEQLAHQANLVNR----AK 57
Query: 82 KYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAELSERMH 141
+YL YFQ +T+T A++++++ Y+QA+++ ++G+ +GTRPDC+PD + L E ++ +
Sbjct: 58 RYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGY 117
Query: 142 -VTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPGETHDMM 200
V LELGLQT ++ T INR H + Y++T + RE KV SHLI GLPGE
Sbjct: 118 EVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARERGLKV--CSHLIVGLPGEGQAEC 175
Query: 201 VENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLSQEDYISIICDQLEIIPKH 260
++ + R V + + GIKLH LH++ + M + + GRL + EDY + + P
Sbjct: 176 LQTLER-VVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPE 234
Query: 261 IVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEK 297
++ HRI+ A R L+ P+W N+W + +D+ + +
Sbjct: 235 VIYHRISASARRPTLLAPLWCENRWTGMVGLDRYLNE 271
>gi|15643281|ref|NP_228325.1| conserved hypothetical protein
[Thermotoga maritima]
gi|7445382|pir||A72365 conserved hypothetical protein - Thermotoga
maritima (strain MSB8)
gi|4981028|gb|AAD35600.1|AE001728_1 conserved hypothetical protein
[Thermotoga maritima]
Length = 303
Score = 197 bits (501), Expect = 2e-49
Identities = 109/304 (35%), Positives = 188/304 (60%), Gaps = 10/304 (3%)
Query: 4 RYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIR 63
RYR ++DY +E +GE++ ++ I GF CPNRDGT +GGC +C +GSG + PIR
Sbjct: 2 RYRKLSDYLKERYGERVQRIVIHGGFSCPNRDGTKGKGGCIYCDATGSGFTTLM-RLPIR 60
Query: 64 EQFYKEIDFMHRKWPE--VNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTR 121
EQ + M +K+ + + K++ YFQ+F+NT+A +E+++ERYE+A+ + ++ +++ TR
Sbjct: 61 EQVME----MKKKYEKRGIKKFIAYFQSFSNTYAPVEMLRERYEEALVDDSIVQLSVSTR 116
Query: 122 PDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPK 181
PD +P+ + E +R+ V++ELGLQT T INR H+ + R+++
Sbjct: 117 PDLVPERVLDLFEEFKKRVDVSVELGLQTANYRTLKKINRGHTLAEFVDAAVRVKKRG-- 174
Query: 182 VEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLL 241
+E+V H+I LP + + +VE + ++ D+ G+KLH L+++ T++ Y +G +++
Sbjct: 175 IELVVHVILNLPWDDMEDVVETA-KILSALDVDGVKLHSLYVVEGTKLAEMYKKGEVKIC 233
Query: 242 SQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSY 301
S E+YI LE + ++VIHR+ D PR I W +K E++N I++E+E+R +Y
Sbjct: 234 SLEEYIDRAITFLEYLSPNVVIHRLVADPPRKGTIFGNWGKSKIEIINMIEEELERRDTY 293
Query: 302 QGCK 305
QG K
Sbjct: 294 QGKK 297
>gi|32473425|ref|NP_866419.1| conserved hypothetical protein
[Pirellula sp.]
gi|32398105|emb|CAD78200.1| conserved hypothetical protein
[Pirellula sp.]
Length = 369
Score = 193 bits (490), Expect = 4e-48
Identities = 104/306 (33%), Positives = 173/306 (55%), Gaps = 14/306 (4%)
Query: 4 RYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIR 63
R+ A R G ++ ++ IDAGF CPN DG V GGC FC + +P IR
Sbjct: 32 RFNAFGKALRRRHGGRVQRVSIDAGFTCPNVDGAVTTGGCNFCD-----NRSFSPSRRIR 86
Query: 64 -----EQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAIN-EPGVIGIN 117
+Q ++I + +++ +V Y+ YFQ TNT+A ++ ++E ++ A+N + ++G+
Sbjct: 87 LQRVADQLTEQIGRVQKRYSDVRGYIAYFQPATNTYAPIDQLREIFDLALNSDDRIVGLA 146
Query: 118 IGTRPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRE 177
+GTRPDC+PD + L EL+ V+LE G+QT ++ + A +NRAH++ + R R+
Sbjct: 147 VGTRPDCVPDSVLDLLQELAVDHDVSLEFGMQTVHDESLAWMNRAHTHADMINAIDRARD 206
Query: 178 LAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGR 237
E SH+I G+P E H MM+E+ + IKLH L+ + T + + G+
Sbjct: 207 RG--FECCSHIILGVPREDHAMMMESAVE-IGRLGFDAIKLHNLYSVRGTPLGEEVLAGK 263
Query: 238 LRLLSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEK 297
+ ++ +EDY+ + D LE +P +++ R++GDAP + LI P W +K + I+ E E+
Sbjct: 264 VEMMRREDYVRTVVDFLERVPPEVIVERVSGDAPPNYLIEPKWCADKQNIRREIEAEFER 323
Query: 298 RQSYQG 303
R S QG
Sbjct: 324 RDSRQG 329
>gi|24372904|ref|NP_716946.1| conserved hypothetical protein
[Shewanella oneidensis MR-1]
gi|24347033|gb|AAN54391.1|AE015577_1 conserved hypothetical protein
[Shewanella oneidensis MR-1]
Length = 309
Score = 192 bits (487), Expect = 8e-48
Identities = 108/286 (37%), Positives = 164/286 (56%), Gaps = 9/286 (3%)
Query: 16 FGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHR 75
+GE++ KL IDA F CPNRDGT+ RGGCTFC V+ S I EQ +
Sbjct: 18 YGERLRKLTIDAKFTCPNRDGTLGRGGCTFCNVA-SFSYQQKETLSISEQLQQGKARYKE 76
Query: 76 KWPEVN--KYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLPDETIYYL 133
P++N K++ YFQ +T+T+ + +++ +Y++A+ + ++G+ +GTRPDC+PD + L
Sbjct: 77 AKPKLNADKFIAYFQAYTSTYDEYQVLMSKYDEAVKDSEIVGLCVGTRPDCVPDNVLDLL 136
Query: 134 AELSER-MHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVSHLINGL 192
A + + V LELGLQT + T INR H++ Y TV R R KV +HLI GL
Sbjct: 137 ASYQHKGVDVWLELGLQTANDKTLHHINRGHNFACYCDTVSRARSRGLKV--CTHLILGL 194
Query: 193 PGETH-DMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLSQEDYISIIC 251
PGET D M + V + G+KLH LH++ + M + + GRL LL+ E Y +
Sbjct: 195 PGETPLDYMA--TLQAVLAQGVDGLKLHPLHVVEGSTMAKVWRAGRLPLLTMEAYAASAG 252
Query: 252 DQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEK 297
+ + PK I+ HR+T A + +L+ P W +W L AI +++ +
Sbjct: 253 ELIRHTPKEIIFHRVTAYAKKPILLAPDWCGYRWNGLVAIVEDLAR 298
>gi|23475791|ref|ZP_00131067.1| hypothetical protein [Desulfovibrio
desulfuricans G20]
Length = 416
Score = 190 bits (482), Expect = 3e-47
Identities = 110/327 (33%), Positives = 166/327 (50%), Gaps = 24/327 (7%)
Query: 4 RYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIR 63
RY ++ Y+R +G +I K+P+DAGF CPNRDGT++ GC FC GSG + +
Sbjct: 60 RYYQLSSYWRHRYGARIQKIPLDAGFTCPNRDGTLSHSGCVFCNPGGSGSGLARKGLTLP 119
Query: 64 EQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPD 123
EQ + ++ + Y+ Y Q+F+NT+ +E ++ Q GV+G IGTRPD
Sbjct: 120 EQ-WAHWQGIYGPRHKSGLYIAYLQSFSNTYGPVEKLEGVLSQIEGFTGVVGAGIGTRPD 178
Query: 124 CLPDETIYYLAELSERM--------------------HVTLELGLQTTYEATSALINRAH 163
CL ++ + +A R+ V LELGLQ++ +AT INR H
Sbjct: 179 CLDEQRLDRIARSIGRIDAALAASGIQPQGICGKAGAEVWLELGLQSSSDATLRRINRGH 238
Query: 164 SYDLYKKTVKRIRELAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHL 223
+ + K V E KV +HLI GLPGET V V + G+K H L++
Sbjct: 239 DFACFVKAVHMAHERGLKV--CAHLIAGLPGETGADFARTVAD-VAALPVAGVKFHGLYV 295
Query: 224 MTNTRMQRDYHEGRLRLLSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLN 283
+T + + G R + E+Y + L ++P +VIHR+TGDA L+ P WS +
Sbjct: 296 AEHTAVAAMWRSGEYRPMEMEEYAQAVASGLAVLPAGVVIHRLTGDAAEGELLAPAWSAD 355
Query: 284 KWEVLNAIDKEMEKRQSYQGCKAEVKH 310
K V+ I+ M + +QGC+A+ H
Sbjct: 356 KRGVIARIEAVMRQNGLWQGCRADAPH 382
>gi|29349533|ref|NP_813036.1| conserved hypothetical protein
[Bacteroides thetaiotaomicron VPI-5482]
gi|29341442|gb|AAO79230.1| conserved hypothetical protein
[Bacteroides thetaiotaomicron VPI-5482]
Length = 324
Score = 190 bits (482), Expect = 3e-47
Identities = 114/305 (37%), Positives = 173/305 (56%), Gaps = 7/305 (2%)
Query: 4 RYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIR 63
+Y + R+ F K+ K+ ++AGF CPNRDGT GGCT+C E I
Sbjct: 6 QYNDFPTFLRKHFPYKVQKISLNAGFTCPNRDGTKGWGGCTYCNNQTFNPDYCRTEKSIA 65
Query: 64 EQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPD 123
Q + F K+PE+ KYL YFQ +TNT+A+LE +K +YE+A+ GV+G+ IGTRPD
Sbjct: 66 TQLEEGKCFFAHKYPEM-KYLAYFQAYTNTYAELEGLKRKYEEALQVDGVVGLVIGTRPD 124
Query: 124 CLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVE 183
C+P+E + YL EL+ + +E G+++ + T INR H+Y + V+R A +
Sbjct: 125 CMPEELLQYLEELNRHTFLMVEYGIESASDETLRRINRGHTYADTVEAVQRTA--ACGIL 182
Query: 184 IVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGR--LRLL 241
H+I GLPGETHD MVE ++ + +K+H L L+ TRM +Y E L
Sbjct: 183 TGGHVILGLPGETHDTMVEQA-GILSALPLSTLKIHQLQLIRGTRMAHEYEENPEGFHLF 241
Query: 242 SQED-YISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQS 300
++ D YI ++ D +E + +V+ R +P+ +LI P W L +E + + K M++R +
Sbjct: 242 TEVDEYIDLVIDYVEHLRPDLVLERFVSQSPKELLIAPDWGLKNYEFVTRLQKRMKERGA 301
Query: 301 YQGCK 305
YQG K
Sbjct: 302 YQGKK 306
>gi|20093484|ref|NP_613331.1| Uncharacterized Fe-S oxidoreductase
[Methanopyrus kandleri AV19]
gi|19886313|gb|AAM01261.1| Uncharacterized Fe-S oxidoreductase
[Methanopyrus kandleri AV19]
Length = 335
Score = 179 bits (455), Expect = 4e-44
Identities = 109/305 (35%), Positives = 174/305 (56%), Gaps = 8/305 (2%)
Query: 3 KRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSG--DAIVAPEA 60
+++ A YYR G K+ K +DAGF CPN+DG ++R GC FC G V P
Sbjct: 6 EKFAAFGAYYRREKGCKVMKAAVDAGFVCPNKDGRISREGCLFCPKMGRTIITPNVDPRK 65
Query: 61 PIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGT 120
+ EQ K+++ ++ K+LVYF TNT+A ++++E Y +A+ V+G++IGT
Sbjct: 66 KLEEQARKQMEVFRERY-GAEKFLVYFYPATNTYAPPDVLEELYNRALEMEDVVGLSIGT 124
Query: 121 RPDCLPDETIYYL-AELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELA 179
RPDCLPDE + L + E V LE+G+Q+ + T R H + R +E
Sbjct: 125 RPDCLPDEVLDILEGYVKEGYDVWLEIGVQSYHHRTLRRTRRGHGLAEVIDAITRAKERG 184
Query: 180 PKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLR 239
+ IV+H+I GLPGET D M+E V R ++ ++ +KL+ L ++ T ++R Y++ R +
Sbjct: 185 --IRIVNHIIFGLPGETRDEMLETV-RVLSVLGVEAVKLYPLVVLERTDLERMYYDRRYK 241
Query: 240 LLSQEDYISIICDQLEIIPKHIVIHRITGD-APRHMLIGPMWSLNKWEVLNAIDKEMEKR 298
LS +YI ++ D LE + ++I R++ D AP I P W L + V++ + KE+ +R
Sbjct: 242 PLSYREYIRLLADALERMAPTVLIQRLSKDRAPDEERIEPEWDLYRMRVISDVRKELARR 301
Query: 299 QSYQG 303
+S QG
Sbjct: 302 ESRQG 306
>gi|32265988|ref|NP_860020.1| conserved hypothetical protein
[Helicobacter hepaticus ATCC 51449]
gi|32262037|gb|AAP77086.1| conserved hypothetical protein
[Helicobacter hepaticus ATCC 51449]
Length = 320
Score = 179 bits (455), Expect = 4e-44
Identities = 101/301 (33%), Positives = 167/301 (54%), Gaps = 27/301 (8%)
Query: 7 AINDYYRELFGEKIFKLPID-AGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPE------ 59
+I Y++ FG ++ K+PI GF CPN DG++A+GGC +C +++ +
Sbjct: 6 SIGRYFKRRFGTRVRKIPISLQGFTCPNIDGSLAKGGCIYCDNESFSPSLIKLDKISEVK 65
Query: 60 ---------------APIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERY 104
+ EQFY +F RK+ V KY++YFQ++TNT+A +K Y
Sbjct: 66 MNFSLTHNPLLQKQLKQLEEQFYWHSEFHQRKF-GVCKYMIYFQSYTNTYAPYSTLKALY 124
Query: 105 EQAINEPGVIGINIGTRPDCLPDETIYYLAELSER-MHVTLELGLQTTYEATSALINRAH 163
++A++ P V+G++IGTR DC+ DE + L E ++ + LE G+Q+ Y+ T + NRAH
Sbjct: 125 DKALSFPNVVGLSIGTRIDCVKDEVLELLGEYVKKGKEIWLEYGIQSVYDNTLTITNRAH 184
Query: 164 SYDLYKKTVKRIRELAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHL 223
S K+ + RE V++ +HLI GLP ET MM+ ++ V + I GIK+H L++
Sbjct: 185 SIAGAKEMFAKTREKG--VKVCAHLIYGLPEETPQMMLYSLES-VLEWGIDGIKIHPLYV 241
Query: 224 MTNTRMQRDYHEGRLRLLSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLN 283
+ TR+ + Y +G+ ++ E + +I L+ IP +V+ RI+ A L+ P W +
Sbjct: 242 VNGTRLAKLYKDGKYEPITMESFSDLIVKSLQKIPPDVVVQRISAGAHDESLLAPKWCFD 301
Query: 284 K 284
K
Sbjct: 302 K 302
>gi|27885653|gb|EAA23081.1| Coproporphyrinogen oxidase, anaerobic
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 220
Score = 169 bits (427), Expect = 6e-41
Identities = 84/227 (37%), Positives = 145/227 (63%), Gaps = 10/227 (4%)
Query: 1 MKKRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEA 60
M ++ +ND+ +E F EKI+K+ +D GF CPNRDG +++GGC FC+ +GSGD
Sbjct: 1 MIRKIYILNDFLKEKFNEKIYKVSLDGGFTCPNRDGNLSKGGCIFCSENGSGDFTSGKLK 60
Query: 61 PIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGT 120
I +Q ++I+ + +K+ + +KY+ YFQNFTNT+A + +++ YE+A+ +IG+ I T
Sbjct: 61 SIHQQIDEQIELVSKKY-KGDKYIAYFQNFTNTYADVNYLRKIYEEALLHKKIIGLAIAT 119
Query: 121 RPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAP 180
RPDCL ++ + L EL+++ + +ELGLQT + + NRA+ +Y++ K++ L
Sbjct: 120 RPDCLRNDVLELLNELNKKTFLWIELGLQTINDEVAKYFNRAYETKIYEEATKKLNSL-- 177
Query: 181 KVEIVSHLINGLPGETHDMMVENV---RRCVTDNDIQGIKLHLLHLM 224
++ V+H+I GLP E +D ++ + C T G+KLHL++++
Sbjct: 178 NIKFVTHIILGLPKEKNDDYLKTAIFSQNCGT----WGLKLHLMYVV 220
>gi|23021883|ref|ZP_00061533.1| hypothetical protein [Clostridium
thermocellum ATCC 27405]
Length = 315
Score = 160 bits (405), Expect = 3e-38
Identities = 94/307 (30%), Positives = 163/307 (52%), Gaps = 7/307 (2%)
Query: 1 MKKRYRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEA 60
MK Y + Y ++ +G K++KLP++ CPNRDG ++ GC FC G+G +
Sbjct: 1 MKMLYNKFSTYLKQKYGTKVYKLPLNLPVTCPNRDGRISSKGCIFCGEEGAGFENLPNFL 60
Query: 61 PIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGT 120
I+EQ ++ + + K++ YFQN+TNT+ LE K A+ E ++ + I T
Sbjct: 61 GIKEQLKLNSRYIGKNYGS-EKFIAYFQNYTNTYLPLEDFKRHINDALEE-NIVAVYIST 118
Query: 121 RPDCLPDETIYYLAE--LSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIREL 178
RPDC+ D + +L E LS+ + + +ELGLQT T L+NR H + V I+
Sbjct: 119 RPDCVRDSYLSFLKEIKLSKGVDIVIELGLQTVNYHTLKLLNRGHLLAEFIDAVLAIKRY 178
Query: 179 APKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRL 238
+E +H I +P ++ D ++E R ++ + +K H L+++ +T + Y G +
Sbjct: 179 G--LESCAHYILDIPMDSMDDVIEGA-RILSALGVNQVKCHSLYILKDTVLGEMYKRGEI 235
Query: 239 RLLSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKR 298
+ ++ E+YI LE + IVI R+ G AP + W ++ W++ ++I+++M +
Sbjct: 236 KHVTLEEYIERAISFLEYLDPSIVIQRLIGRAPEERSLFCNWGMSWWKIHDSIERKMTEE 295
Query: 299 QSYQGCK 305
YQG K
Sbjct: 296 NRYQGKK 302
>gi|10956071|ref|NP_053055.1| unknown [Selenomonas ruminantium]
gi|5739175|gb|AAD50370.1| unknown [Selenomonas ruminantium]
Length = 324
Score = 155 bits (392), Expect = 9e-37
Identities = 96/303 (31%), Positives = 156/303 (50%), Gaps = 8/303 (2%)
Query: 5 YRAINDYYRELFGEKIFKLPIDAGFDCPNRDGTVARG--GCTFCTVSGSGDAIVAPEAPI 62
YR + Y +E +GEK++KLPI CPNRDG+ G GCTFC G+G + I
Sbjct: 8 YRPFSTYLKERYGEKVYKLPIALPVTCPNRDGSCGNGGAGCTFCGEIGTGYENLPASMTI 67
Query: 63 REQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRP 122
EQ + K+ + K++ Y QNF+NT+ + + +A V+ + I TRP
Sbjct: 68 TEQMEANKAHIIPKY-KAKKFIPYLQNFSNTYTTPKKLAAWVAEAGAPEDVVAVYIATRP 126
Query: 123 DCLPDETIYYLAELSER--MHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAP 180
DC+ DE + L E +++ + + +ELGLQ+T T INR H+ + RI+
Sbjct: 127 DCVSDEHLAVLKEQADKYGIDICVELGLQSTNVHTLTAINRGHTLAELIDAILRIKRYG- 185
Query: 181 KVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRL 240
++ HLI LP + ++E+ + ++ + +KLH L+++ T M RDY EG+L++
Sbjct: 186 -LQSCVHLILNLPWDDELDVIEDA-KILSALGVDQVKLHALYIVKGTAMARDYEEGKLKM 243
Query: 241 LSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQS 300
++ +Y + LE + IV+ RI G AP + W W++ + I M +
Sbjct: 244 ITLPEYEDRVIKFLEHLSPAIVLQRIIGRAPEENTLFSNWHTGWWKIRDHIINVMRQEGR 303
Query: 301 YQG 303
YQG
Sbjct: 304 YQG 306
>gi|15668663|ref|NP_247462.1| conserved hypothetical protein
[Methanococcus jannaschii]
gi|2496003|sp|Q57910|Y486_METJA Hypothetical protein MJ0486
gi|2128013|pir||F64360 conserved hypothetical protein homolog
MJ0486 - Methanococcus jannaschii
gi|1591189|gb|AAB98477.1| conserved hypothetical protein
[Methanococcus jannaschii]
Length = 322
Score = 151 bits (381), Expect = 2e-35
Identities = 93/299 (31%), Positives = 175/299 (58%), Gaps = 13/299 (4%)
Query: 11 YYRELFGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAI--VAPEAPIREQFYK 68
Y ++ F +KIFK+P+D G CP++ GGC FC G ++ + + P++EQ K
Sbjct: 30 YIKKKFKQKIFKIPVDIGLGCPHKKN----GGCIFCPEMGRPISVKYCSAKIPLKEQIKK 85
Query: 69 EIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLPDE 128
+++ +K K+ +YF TNT+A E +KE ++ +++ VIG++IGTRPDCL E
Sbjct: 86 QMENQKKK--GFKKFYIYFYPGTNTYAPAEKLKEIWDFSLSYKEVIGLSIGTRPDCLEKE 143
Query: 129 TIYYLAELSERMH-VTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVSH 187
+ LAE E + + ++LG+Q+ ++ T ++NR H K +K + +++ H
Sbjct: 144 KLDILAEYVENGYDIWIDLGVQSMHQKTLEILNRGHDVSDIIKAIKDCHKRG--IKVCGH 201
Query: 188 LINGLPGETHDMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLRLLSQEDYI 247
+I GLPGE+ M+E + ++ +I+ +K++ L ++ T+++ Y +G R L + YI
Sbjct: 202 VILGLPGESWKEMMETA-KILSLLEIEAVKIYPLVVVKGTKLEEMYWKGEYRTLDENQYI 260
Query: 248 SIICDQLEIIPKHIVIHRITGD-APRHMLIGPMWSLNKWEVLNAIDKEMEKRQSYQGCK 305
S++CD LE + +++I R++ D P + + P W L + +++N + + ++KR + QG +
Sbjct: 261 SLVCDFLEHLSPYVLIQRLSKDKVPESIKVSPEWYLGRLKIMNKVSEILKKRGTKQGAR 319
>gi|15375026|gb|AAK94786.1| hypothetical protein [Klebsiella
aerogenes]
Length = 198
Score = 150 bits (378), Expect = 3e-35
Identities = 75/182 (41%), Positives = 112/182 (61%), Gaps = 8/182 (4%)
Query: 16 FGEKIFKLPIDAGFDCPNRDGTVARGGCTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHR 75
+GEK+ KL + GF CPNRDGT+ RGGCTFC V+ D I EQ + ++R
Sbjct: 18 YGEKVHKLTLHGGFSCPNRDGTLGRGGCTFCNVASFADE-AQQHRSIAEQLAHQAQLVNR 76
Query: 76 KWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAE 135
+YL YFQ +T+T A++++++ Y QA++ ++G+ +GTRPDC+P + L+E
Sbjct: 77 ----AKRYLAYFQAYTSTFAEVQVLRSMYRQAVSAANIVGLCVGTRPDCVPQAVLDLLSE 132
Query: 136 LSERMH-VTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPG 194
++ + V LELGLQT ++ T INR H + Y++T + RE KV +HLI GLPG
Sbjct: 133 YHQQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTARLARERGLKV--CAHLIVGLPG 190
Query: 195 ET 196
E+
Sbjct: 191 ES 192
>gi|21402796|ref|NP_658781.1| hypothetical protein predicted by
GeneMark [Bacillus anthracis A2012]
Length = 50
Score = 68.6 bits (166), Expect = 1e-10
Identities = 28/41 (68%), Positives = 34/41 (82%)
Query: 263 IHRITGDAPRHMLIGPMWSLNKWEVLNAIDKEMEKRQSYQG 303
+HRITGD P ++IGPMWSLNKWEVLN+ID E +R S+QG
Sbjct: 1 MHRITGDGPPDLMIGPMWSLNKWEVLNSIDAEFVRRGSWQG 41
>gi|18312276|ref|NP_558943.1| conserved hypothetical protein
[Pyrobaculum aerophilum]
gi|18159720|gb|AAL63125.1| conserved hypothetical protein
[Pyrobaculum aerophilum str. IM2]
Length = 471
Score = 65.1 bits (157), Expect = 1e-09
Identities = 60/243 (24%), Positives = 113/243 (45%), Gaps = 15/243 (6%)
Query: 59 EAPIREQFYKEIDFMHRKWPEVNKY--LVYFQNFTNTH---AKLEIIKERYEQAINEPGV 113
EA I + + +R+W N Y L F ++T++ LE + R E A E +
Sbjct: 73 EAVIMGGTFSALPRGYREWFVANIYKALNDFPHWTSSADPTPNLEAEQIRNETA--ELRM 130
Query: 114 IGINIGTRPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVK 173
+ + + TRPD + + +L +L +ELG+Q+ Y+ + R H +
Sbjct: 131 VALTVETRPDFINKAEVDFLLKLGV---TRVELGVQSIYDDVLQKVKRGHGAAEVVEATA 187
Query: 174 RIRELAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQG--IKLHLLHLMTNTRMQR 231
+++ A KV H++ GLPG D +E VR ++ +K++ L+++ NT +
Sbjct: 188 ILKDSAYKV--CYHVMPGLPGSDPDRDLEMVREIFSNPSYMPDCVKIYPLYVVPNTELSE 245
Query: 232 DYHEGRLRLLSQEDYISIICDQLEIIPKHIVIHRITGDAP-RHMLIGPMWSLNKWEVLNA 290
D+ G + +E ++ ++ IP+ + + R D P H+L GP W + VL
Sbjct: 246 DWRRGLYKSYDEETWLELLAKIYASIPRWVRVMRFGRDIPLHHVLDGPRWGNMRQIVLKH 305
Query: 291 IDK 293
+++
Sbjct: 306 MER 308
>gi|15790500|ref|NP_280324.1| Vng1510c [Halobacterium sp. NRC-1]
gi|25314801|pir||H84304 hypothetical protein Vng1510c [imported] -
Halobacterium sp. NRC-1
gi|10581002|gb|AAG19804.1| Vng1510c [Halobacterium sp. NRC-1]
Length = 549
Score = 60.5 bits (145), Expect = 4e-08
Identities = 45/182 (24%), Positives = 86/182 (46%), Gaps = 10/182 (5%)
Query: 107 AINEPGV---IGINIGTRPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAH 163
A NE G IG T+PD E + + +L +E+G+QTT+E + ++R H
Sbjct: 214 ADNEHGALRNIGTTFETKPDWCDPEQVDRMLDLGA---TKVEVGVQTTFERVNREMHRGH 270
Query: 164 SYDLYKKTVKRIRELAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQG--IKLHLL 221
+R+R+ A KV H++ G PG + +M++E+ RR D + +K++
Sbjct: 271 GVQASVDANRRLRDAAFKVGF--HMMPGQPGMSKEMVLEDFRRLFDDERWKPDYLKIYPT 328
Query: 222 HLMTNTRMQRDYHEGRLRLLSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMWS 281
++ +T + G L E+ ++ + ++IP++ + R+ D P + +W
Sbjct: 329 LVVRDTITYDMWRNGDFEPLHNEEAADLVAEIKDMIPRYTRLQRVQRDIPADFIDAGVWK 388
Query: 282 LN 283
N
Sbjct: 389 SN 390
>gi|11279264|pir||T31310 hypothetical protein - Cenarchaeum
symbiosum
gi|3599396|gb|AAC62701.1| hypothetical protein [Cenarchaeum
symbiosum]
Length = 522
Score = 56.6 bits (135), Expect = 5e-07
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 12/188 (6%)
Query: 95 AKLEIIKERYEQAINEPGVIGINIGTRPD-CLPDETIYYLAELSERMHVTLELGLQTTYE 153
A +E K R E A++ +G+ I T+PD C + L + R +E+G+Q+ E
Sbjct: 182 AGMEEAKHRNETAVHRN--VGLTIETKPDYCRTEHVDAMLGFGATR----VEIGVQSLRE 235
Query: 154 ATSALINRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDI 213
+NR H Y ++ R+ KV +H++ GLPG T + +E++R D +
Sbjct: 236 EVYLRVNRGHGYQDVTESFAAARDAGYKV--AAHMMPGLPGATPEGDIEDLRMLFEDPAL 293
Query: 214 QG--IKLHLLHLMTNTRMQRDYHEGRLRLLSQEDYISIICDQLEIIPKHIVIHRITGDA- 270
+ +K++ ++ T M +Y G ++E+ I ++ + +P+ I R+ +
Sbjct: 294 RPDMLKVYPALVVRGTPMYEEYSRGEYSPYTEEEVIRVLSEAKARVPRWARIMRVQREIH 353
Query: 271 PRHMLIGP 278
P ++ GP
Sbjct: 354 PDEIVAGP 361
>gi|20089710|ref|NP_615785.1| histone acetyltransferase
[Methanosarcina acetivorans str. C2A]
gi|19914640|gb|AAM04265.1| histone acetyltransferase
[Methanosarcina acetivorans str. C2A]
Length = 547
Score = 54.3 bits (129), Expect = 3e-06
Identities = 39/164 (23%), Positives = 75/164 (44%), Gaps = 7/164 (4%)
Query: 114 IGINIGTRPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVK 173
+GI TRPD +E ++ E +ELG+Q+ Y+ + R H + +
Sbjct: 216 VGITFETRPDWAAEE---HVDEFLRLGGTKVELGVQSVYDFILTRMQRGHGVAEIVRANR 272
Query: 174 RIRELAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQG--IKLHLLHLMTNTRMQR 231
+R+ A KV H++ LPG ++ + ++ D + +K++ + T + R
Sbjct: 273 VLRDSAFKVGF--HMMPHLPGANSELDLRGFKKLFEDPRFRPDYLKIYPTLVTEGTALYR 330
Query: 232 DYHEGRLRLLSQEDYISIICDQLEIIPKHIVIHRITGDAPRHML 275
+ G + LS E+ ++ D ++PK + + RI D P H +
Sbjct: 331 MWEAGEYQALSDEEAAELVADIKSVLPKWVRLQRIQRDIPAHQI 374
>gi|21228076|ref|NP_633998.1| histone acetyltransferase
[Methanosarcina mazei Goe1]
gi|20906512|gb|AAM31670.1| histone acetyltransferase
[Methanosarcina mazei Goe1]
Length = 555
Score = 53.1 bits (126), Expect = 5e-06
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 114 IGINIGTRPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVK 173
+GI TRPD +E ++ E +E+G+Q+ Y+ + + R H + +
Sbjct: 224 VGITFETRPDWAREE---HVDEFLRLGGTKVEIGVQSVYDFVLSRMQRGHGVAEIVRANR 280
Query: 174 RIRELAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQG--IKLHLLHLMTNTRMQR 231
+R+ A KV H++ LPG ++ + ++ D + +K++ + T + R
Sbjct: 281 VLRDSAFKVGF--HMMPHLPGADSELDLRGFKKLFDDQRFRPDYLKIYPTLVTEGTPLYR 338
Query: 232 DYHEGRLRLLSQEDYISIICDQLEIIPKHIVIHRITGDAPRHML 275
+ G + LS E+ ++ D ++PK + + RI D P H +
Sbjct: 339 MWKSGEYQALSDEEAAELVADIKAVLPKWVRLQRIQRDIPAHQI 382
>gi|11499978|ref|NP_071224.1| conserved hypothetical protein
[Archaeoglobus fulgidus DSM 4304]
gi|7447672|pir||C69550 conserved hypothetical protein AF2402 -
Archaeoglobus fulgidus
gi|2650692|gb|AAB91263.1| conserved hypothetical protein
[Archaeoglobus fulgidus DSM 4304]
Length = 517
Score = 52.8 bits (125), Expect = 8e-06
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 14/219 (6%)
Query: 61 PIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGT 120
P R+ YKE FM + +N F + T LE K + E+A + +GI T
Sbjct: 148 PARDADYKE-KFMLGIFNALNS----FNSNTKPENDLERAKRKNERA--KARCVGITFET 200
Query: 121 RPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAP 180
RPD +E ++ E+ +ELG+Q+ Y+ I R H + + +R+ A
Sbjct: 201 RPDYAREE---HIREMLRFGGTKVELGVQSLYDDVLERIKRGHGVKEVAEATRLLRDSAF 257
Query: 181 KVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQG--IKLHLLHLMTNTRMQRDYHEGRL 238
KV H++ GLPG + + + R ++ + +K++ ++ T + + G
Sbjct: 258 KVGY--HIMPGLPGSSFERDLRMFRELFENDSFKPDYLKIYPTLVVEGTELYEMWKRGEY 315
Query: 239 RLLSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIG 277
+ E+ + +I P+ + + RI D P IG
Sbjct: 316 EPYTTEEVVELIVMAKRRFPEWVRVQRIQRDIPVKAAIG 354
>gi|15669323|ref|NP_248128.1| conserved hypothetical protein
[Methanococcus jannaschii]
gi|2496153|sp|Q58536|YB36_METJA Hypothetical protein MJ1136
gi|2128071|pir||G64441 hypothetical protein Lpg22p homolog -
Methanococcus jannaschii
gi|1591770|gb|AAB99138.1| conserved hypothetical protein
[Methanococcus jannaschii]
Length = 541
Score = 51.2 bits (121), Expect = 2e-05
Identities = 49/197 (24%), Positives = 88/197 (43%), Gaps = 13/197 (6%)
Query: 106 QAINEPG---VIGINIGTRPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRA 162
Q INE + + I TRPD ++ I + +L +ELG+QT Y R
Sbjct: 197 QKINETAEHRCVALCIETRPDYCGEKEINQMLKLGA---TRVELGVQTIYNEILEFCKRG 253
Query: 163 HSYDLYKKTVKRIRELAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQG--IKLHL 220
H+ + K + +++ KV HL+ G+PG +M + + + D + +K++
Sbjct: 254 HTVEDTIKATQLLKDSGLKVSY--HLMPGMPGSDMEMDKKMFKEIFENPDFKPDMVKIYP 311
Query: 221 LHLMTNTRMQRDYHEGRLRLLSQEDYISIICDQLEIIPKHIVIHRITGDAPRHMLIGPMW 280
++ T + + G + +E+ I II I+PK + RI D P +++ +
Sbjct: 312 CLVIEGTELYEMWKRGEYKPYREEEAIEIISYAKSIMPKWVRTSRIQRDIPATVIVDGVK 371
Query: 281 SLNKWEVLNAIDKEMEK 297
N E+ + K MEK
Sbjct: 372 KSNLGEL---VYKYMEK 385
>gi|14591614|ref|NP_143696.1| hypothetical protein PH1867
[Pyrococcus horikoshii]
gi|7447673|pir||F71199 hypothetical protein PH1867 - Pyrococcus
horikoshii
gi|3258306|dbj|BAA30989.1| 617aa long hypothetical protein
[Pyrococcus horikoshii]
Length = 617
Score = 50.4 bits (119), Expect = 3e-05
Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 18/212 (8%)
Query: 67 YKEIDFMHRKWPEVNKYLVYFQNFTNTHAKLEIIKERYEQAINEPGVIGINIGTRPDCLP 126
+KE R W ++ Y+ LE + + E+A + ++G+ I TRPD
Sbjct: 229 FKEDPEFKRAWERTHRKPYYY---------LEDEQRKNEKA--KVRMVGLTIETRPDWAF 277
Query: 127 DETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVKRIRELAPKVEIVS 186
+ I + +ELG+QT + R H + K + +++ KV
Sbjct: 278 ERQIDRMLSFGT---TRVELGVQTIFNFIHERTKRGHGVEEIIKATQLLKDAGLKVNY-- 332
Query: 187 HLINGLPGETHDMMVENVRRCVTDNDIQG--IKLHLLHLMTNTRMQRDYHEGRLRLLSQE 244
H++ GLPG D + R D + +K++ + + + Y G R + E
Sbjct: 333 HIMPGLPGSNFDRDLYTFRTIFEDPRFRPDMLKIYPTLVTRDAPLYAWYKAGLYRPYTTE 392
Query: 245 DYISIICDQLEIIPKHIVIHRITGDAPRHMLI 276
+ + ++ + +I PK + + RI D P H+++
Sbjct: 393 EALELLVEAYKIFPKWVRVMRIQRDIPAHLIV 424
>gi|6325171|ref|NP_015239.1| elongator protein; histone and other
protein acetyltransferase; has sequence homology to
known HATs and NATs; Elp3p [Saccharomyces cerevisiae]
gi|2132182|pir||S61980 histone acetyltransferase (EC 2.3.1.48), RNA
polymerase II-associated [validated] - yeast
(Saccharomyces cerevisiae)
gi|1151240|gb|AAB68213.1| Lpg22p
Length = 557
Score = 49.7 bits (117), Expect = 6e-05
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 114 IGINIGTRPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLYKKTVK 173
+GI I TRPD T +L ++ + LE+G+Q+ YE + NR H+ +T
Sbjct: 225 VGITIETRPDYC---TQTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVRSVCETFA 281
Query: 174 RIRELAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQ--GIKLHLLHLMTNTRMQR 231
++ KV VSH++ LP + +E + + D + G+K++ ++ T +
Sbjct: 282 VSKDAGYKV--VSHMMPDLPNVGMERDIEQFKEYFENPDFRTDGLKIYPTLVIRGTGLYE 339
Query: 232 DYHEGRLRLLSQEDYISIICDQLEIIPKHIVIHRITGDAP 271
+ GR + S + ++ L ++P I+R+ D P
Sbjct: 340 LWKTGRYKSYSANALVDLVARILALVPPWTRIYRVQRDIP 379
>gi|19115774|ref|NP_594862.1| conserved hypothetical protein
[Schizosaccharomyces pombe]
gi|7490285|pir||T38469 conserved hypothetical protein SPAC29A4.20 -
fission yeast (Schizosaccharomyces pombe)
gi|2239229|emb|CAB10146.1| SPAC29A4.20 [Schizosaccharomyces pombe]
Length = 544
Score = 49.3 bits (116), Expect = 8e-05
Identities = 41/165 (24%), Positives = 76/165 (45%), Gaps = 7/165 (4%)
Query: 109 NEPGVIGINIGTRPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALINRAHSYDLY 168
+E +GI I TRPD D+ +L E+ LE+G+Q+ YE + NR H+
Sbjct: 208 SETKCVGITIETRPDYCLDQ---HLDEMLRYGCTRLEIGVQSVYEDVARDTNRGHTVKAV 264
Query: 169 KKTVKRIRELAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQ--GIKLHLLHLMTN 226
+T + ++ KV V+H++ LP + + + + + G+KL+ ++
Sbjct: 265 CETFQLAKDTGYKV--VTHMMPDLPNVGMERDIFQFQEYFENPAFRTDGLKLYPTLVIRG 322
Query: 227 TRMQRDYHEGRLRLLSQEDYISIICDQLEIIPKHIVIHRITGDAP 271
T + + GR + + + +I L ++P I+RI D P
Sbjct: 323 TGLYELWKTGRYKNYTPNALVDLIARILALVPPWTRIYRIQRDIP 367
Database: nr
Posted date: Aug 11, 2003 9:58 AM
Number of letters in database: 479,114,161
Number of sequences in database: 1,487,057
Lambda K H
0.322 0.139 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 302,143,841
Number of Sequences: 1487057
Number of extensions: 12476989
Number of successful extensions: 26785
Number of sequences better than 1.0e-04: 78
Number of HSP's better than 0.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 26558
Number of HSP's gapped (non-prelim): 83
length of query: 311
length of database: 479,114,161
effective HSP length: 123
effective length of query: 188
effective length of database: 296,206,150
effective search space: 55686756200
effective search space used: 55686756200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 116 (49.3 bits)