BLAST Search Results
BLASTP 2.2.4 [Aug-26-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KSHV017
(175 letters)
Database: nr
1,508,275 sequences; 485,782,529 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18845982|ref|NP_572068.1| ORF 16; functional anti-apoptotic f... 350 6e-96
gi|20663999|pdb|1K3K|A Chain A, Solution Structure Of A Bcl-2 Ho... 296 1e-79
gi|18653822|ref|NP_570756.1| Bcl-2 homolog [Macaca mulatta rhadi... 170 8e-42
gi|4959471|gb|AAD34361.1|AF129421_1 Bcl-2 [Bovine herpesvirus 4] 70 2e-11
gi|13095593|ref|NP_076508.1| v-Bcl-2 protein [Bovine herpesvirus... 70 2e-11
gi|4883769|gb|AAD31644.1| myeloid cell leukemia protein MCL-1 [G... 50 1e-05
gi|476995|pir||A47476 BCL2 homolog MCL1 - human 50 2e-05
gi|19862730|sp|Q07820|MCL1_HUMAN Induced myeloid leukemia cell d... 49 3e-05
gi|30583919|gb|AAP36208.1| Homo sapiens myeloid cell leukemia se... 49 3e-05
gi|11386165|ref|NP_068779.1| myeloid cell leukemia sequence 1 is... 49 3e-05
gi|32127949|dbj|BAC77771.1| Mcl-1 [Felis catus] 49 3e-05
gi|6525061|gb|AAF15310.1|AF118277_1 Bcl-2-related protein EAT/mc... 48 6e-05
gi|23978940|dbj|BAC21258.1| Mcl-1 [Canis familiaris] 47 1e-04
gi|9625972|ref|NP_040218.1| ORF 16 [Saimiriine herpesvirus 2] >g... 47 2e-04
gi|6678824|ref|NP_032588.1| myeloid cell leukemia sequence 1 [Mu... 47 2e-04
gi|9631206|ref|NP_047987.1| orf 16; bcl-2 family member [Ateline... 47 2e-04
gi|6525063|gb|AAF15311.1|AF118278_1 Bcl-2-related protein EAT/mc... 47 2e-04
gi|2370240|emb|CAA73630.1| Bcl2 like protein [Saimiriine herpesv... 46 2e-04
gi|11177878|ref|NP_068618.1| myeloid cell leukemia sequence 1 [R... 46 3e-04
>gi|18845982|ref|NP_572068.1| ORF 16; functional anti-apoptotic
factor vBCL-2 homolog; EBV BHRF1 homolog [Human
herpesvirus 8]
gi|1718268|gb|AAC57097.1| ORF 16; functional anti-apoptotic factor
vBCL-2 homolog; EBV BHRF1 homolog [Human herpesvirus 8]
gi|1732568|gb|AAB39217.1| Bcl-2 [Human herpesvirus 8]
gi|2246471|gb|AAB62596.1| ORF 16, v-bcl2, functional anti-apoptotic
factor bcl-2 homolog [Human herpesvirus 8]
gi|3551764|gb|AAC34944.1| unknown [Human herpesvirus 8]
Length = 175
Score = 350 bits (898), Expect = 6e-96
Identities = 175/175 (100%), Positives = 175/175 (100%)
Query: 1 MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRF 60
MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRF
Sbjct: 1 MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRF 60
Query: 61 HSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPVYAY 120
HSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPVYAY
Sbjct: 61 HSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPVYAY 120
Query: 121 EAIGPQWFRARGGWRGLKAYCTQVLTRRRGRRMTALLGSIALLATILAAVAMSRR 175
EAIGPQWFRARGGWRGLKAYCTQVLTRRRGRRMTALLGSIALLATILAAVAMSRR
Sbjct: 121 EAIGPQWFRARGGWRGLKAYCTQVLTRRRGRRMTALLGSIALLATILAAVAMSRR 175
>gi|20663999|pdb|1K3K|A Chain A, Solution Structure Of A Bcl-2
Homolog From Kaposi's Sarcoma Virus
Length = 158
Score = 296 bits (758), Expect = 1e-79
Identities = 144/146 (98%), Positives = 145/146 (98%)
Query: 1 MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRF 60
MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRF
Sbjct: 1 MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRF 60
Query: 61 HSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPVYAY 120
HSTTGI+QLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLP YAY
Sbjct: 61 HSTTGIDQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPAYAY 120
Query: 121 EAIGPQWFRARGGWRGLKAYCTQVLT 146
EAIGPQWFRARGGWRGLKAYCTQVLT
Sbjct: 121 EAIGPQWFRARGGWRGLKAYCTQVLT 146
>gi|18653822|ref|NP_570756.1| Bcl-2 homolog [Macaca mulatta
rhadinovirus]
gi|4494920|gb|AAD21342.1| Bcl-2 homolog [Macaca mulatta
rhadinovirus 17577]
gi|7330005|gb|AAF59994.1|AF210726_15 Bcl-2 homolog [Macaca mulatta
rhadinovirus 26-95]
Length = 187
Score = 170 bits (431), Expect = 8e-42
Identities = 80/173 (46%), Positives = 114/173 (65%)
Query: 2 DEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRFH 61
+E+ LP +V AIEGIF+ CGL + EYL+HP+ SPIK +I+ ++D L+E +L + +
Sbjct: 15 NENSLPVDVYAIEGIFLYCGLGQAEYLHHPVFSPIKEFISAFLKDSARLYERLLRHTDYR 74
Query: 62 STTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPVYAYE 121
S G+N +G MLQ++ DG NWGRALA+L G++V K+ ++ L FA+AVLPVYAYE
Sbjct: 75 SLRGLNAIGQGMLQINTDGRHNWGRALAVLGLGAYVVDKVKDDERLLTFAIAVLPVYAYE 134
Query: 122 AIGPQWFRARGGWRGLKAYCTQVLTRRRGRRMTALLGSIALLATILAAVAMSR 174
A+ QWFR+ G W GL+ YC ++L RR R G A L ++A A+ R
Sbjct: 135 ALESQWFRSHGEWEGLRNYCERILRHRRNARRHMCYGVAAGLLALVALFAIRR 187
>gi|4959471|gb|AAD34361.1|AF129421_1 Bcl-2 [Bovine herpesvirus 4]
Length = 226
Score = 69.7 bits (169), Expect = 2e-11
Identities = 40/145 (27%), Positives = 70/145 (47%), Gaps = 3/145 (2%)
Query: 1 MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRF 60
M E + V I + + CG+ EYL HP+ +PIK+ + ++R K+ +F L N+
Sbjct: 51 MAEQDMDEVVSTIRRLLVECGMGLEEYLEHPVTAPIKVAVQDVIRTKQDIFSNFLTNI-- 108
Query: 61 HSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL-SNEPHLRDFALAVLPVYA 119
+S + LG ++ ++ + N GR + + F +V Q + +P L L +
Sbjct: 109 NSVEDLETLGHAITTLNDYPSPNMGRVVCGIAFSVYVVQTVCKRKPLLVRCCLDIFTRAT 168
Query: 120 YEAIGPQWFRARGGWRGLKAYCTQV 144
+A+ WF GGW L ++C V
Sbjct: 169 VQALNVNWFLQEGGWPALASFCKVV 193
>gi|13095593|ref|NP_076508.1| v-Bcl-2 protein [Bovine herpesvirus 4]
gi|12802543|gb|AAK07935.1|AF318573_15 v-Bcl-2 protein [Bovine
herpesvirus 4]
Length = 226
Score = 69.7 bits (169), Expect = 2e-11
Identities = 40/145 (27%), Positives = 70/145 (47%), Gaps = 3/145 (2%)
Query: 1 MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRF 60
M E + V I + + CG+ EYL HP+ +PIK+ + ++R K+ +F L N+
Sbjct: 51 MAEQDMDEVVSTIRRLLVECGMGLEEYLEHPVTAPIKVAVQDVIRTKQDIFSNFLTNI-- 108
Query: 61 HSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL-SNEPHLRDFALAVLPVYA 119
+S + LG ++ ++ + N GR + + F +V Q + +P L L +
Sbjct: 109 NSVEDLETLGHAITTLNDYPSPNMGRVVCGIAFSVYVVQTVCKRKPLLVRCCLDIFTRAT 168
Query: 120 YEAIGPQWFRARGGWRGLKAYCTQV 144
+A+ WF GGW L ++C V
Sbjct: 169 VQALNVNWFLQEGGWPALASFCKVV 193
>gi|4883769|gb|AAD31644.1| myeloid cell leukemia protein MCL-1
[Gallus gallus]
Length = 211
Score = 50.4 bits (119), Expect = 1e-05
Identities = 28/96 (29%), Positives = 48/96 (49%), Gaps = 1/96 (1%)
Query: 42 GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
G+M+ E F+ ML + + + QV DG NWGR + +++FG+FVA+ L
Sbjct: 76 GVMQKHELAFQGMLRKLEIKKEDDLQAVCEVAAQVFNDGVTNWGRVVTLISFGAFVAKHL 135
Query: 102 SNEPHLRDF-ALAVLPVYAYEAIGPQWFRARGGWRG 136
+ + +LA + A + +W ++GGW G
Sbjct: 136 KSINQEKCITSLAGIITDALVSSKREWLMSQGGWEG 171
>gi|476995|pir||A47476 BCL2 homolog MCL1 - human
Length = 350
Score = 50.1 bits (118), Expect = 2e-05
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 42 GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
G+ R+ E++F+ ML + + + L M+ V DG NWGR + +++FG+FVA+ L
Sbjct: 219 GVQRNHETVFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHL 278
Query: 102 ---SNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRG 136
+ E + A ++ V W + GW G
Sbjct: 279 KTINQESCIEPLAESITDVLV--RTKRDWLVKQRGWDG 314
>gi|19862730|sp|Q07820|MCL1_HUMAN Induced myeloid leukemia cell
differentiation protein Mcl-1
gi|7582271|gb|AAF64255.1|AF198614_1 Mcl-1 [Homo sapiens]
Length = 350
Score = 49.3 bits (116), Expect = 3e-05
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 42 GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
G+ R+ E+ F+ ML + + + L M+ V DG NWGR + +++FG+FVA+ L
Sbjct: 219 GVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHL 278
Query: 102 ---SNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRG 136
+ E + A ++ V W + GW G
Sbjct: 279 KTINQESCIEPLAESITDVLV--RTKRDWLVKQRGWDG 314
>gi|30583919|gb|AAP36208.1| Homo sapiens myeloid cell leukemia
sequence 1 (BCL2-related) [synthetic construct]
Length = 351
Score = 49.3 bits (116), Expect = 3e-05
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 42 GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
G+ R+ E+ F+ ML + + + L M+ V DG NWGR + +++FG+FVA+ L
Sbjct: 219 GVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHL 278
Query: 102 ---SNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRG 136
+ E + A ++ V W + GW G
Sbjct: 279 KTINQESCIEPLAESITDVLV--RTKRDWLVKQRGWDG 314
>gi|11386165|ref|NP_068779.1| myeloid cell leukemia sequence 1
isoform 1; induced myeloid leukemia cell differentiation
protein Mcl-1 [Homo sapiens]
gi|4235637|gb|AAD13299.1| myeloid cell leukemia sequence 1;
EAT/mcl1 [Homo sapiens]
gi|8388943|gb|AAF74821.1|AF147742_1 myeloid cell differentiation
protein [Homo sapiens]
gi|9857700|gb|AAG00896.1| myeloid cell leukemia protein 1 [Homo
sapiens]
gi|16877949|gb|AAH17197.1| Myeloid cell leukemia sequence 1,
isoform 1 [Homo sapiens]
gi|30582119|gb|AAP35286.1| myeloid cell leukemia sequence 1
(BCL2-related) [Homo sapiens]
Length = 350
Score = 49.3 bits (116), Expect = 3e-05
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 42 GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
G+ R+ E+ F+ ML + + + L M+ V DG NWGR + +++FG+FVA+ L
Sbjct: 219 GVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHL 278
Query: 102 ---SNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRG 136
+ E + A ++ V W + GW G
Sbjct: 279 KTINQESCIEPLAESITDVLV--RTKRDWLVKQRGWDG 314
>gi|32127949|dbj|BAC77771.1| Mcl-1 [Felis catus]
Length = 350
Score = 49.3 bits (116), Expect = 3e-05
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 42 GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
G+ R+ E+ F+ ML + + + L M+ V DG NWGR + +++FG+FVA+ L
Sbjct: 219 GVQRNHETAFQGMLRKLDIKNENDVKSLSRVMVHVFSDGVTNWGRIVTLISFGAFVAKHL 278
Query: 102 ---SNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRG 136
+ E + A ++ V W + GW G
Sbjct: 279 KSINQESCIEPLAESITDVLV--RTKRDWLVKQRGWDG 314
>gi|6525061|gb|AAF15310.1|AF118277_1 Bcl-2-related protein EAT/mcl1
[Homo sapiens]
Length = 108
Score = 48.1 bits (113), Expect = 6e-05
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 42 GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
G+ R+ E+ F+ ML + + + L M+ V DG NWGR + +++FG+FVA+ L
Sbjct: 38 GVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHL 97
>gi|23978940|dbj|BAC21258.1| Mcl-1 [Canis familiaris]
Length = 350
Score = 47.4 bits (111), Expect = 1e-04
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 42 GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
G+ R+ E+ F+ ML + + + L ++ V DG NWGR + +++FG+FVA+ L
Sbjct: 219 GVQRNHETAFQGMLRKLDIKNEDDVKSLSRVIVHVFSDGVTNWGRIVTLISFGAFVAKHL 278
Query: 102 ---SNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRG 136
+ E + A ++ V W + GW G
Sbjct: 279 KSINQESCIEPLAESITDVLV--RTKRDWLVKQRGWDG 314
>gi|9625972|ref|NP_040218.1| ORF 16 [Saimiriine herpesvirus 2]
gi|267314|sp|Q01001|VG16_HSVSA Bcl-2-like gene 16 protein
gi|76661|pir||G36807 hypothetical protein ORF16 - saimiriine
herpesvirus 1 (strain 11)
gi|60337|emb|CAA45639.1| unnamed protein product [Saimiriine
herpesvirus 2]
Length = 160
Score = 46.6 bits (109), Expect = 2e-04
Identities = 30/121 (24%), Positives = 59/121 (47%), Gaps = 7/121 (5%)
Query: 51 FEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDF 110
FEA++ + I G ++L ++ + NWG+ +A+L+F + V Q + E +
Sbjct: 41 FEALMPDFSLCVHDRIKFTGEAIL-LTTEHTTNWGKVVAMLSFSAAVLQTIDEE--YKCV 97
Query: 111 ALAVLPVYAYEAIGPQWFRARGGWRGLKAYCTQVLTRRRGRRMT----ALLGSIALLATI 166
A ++L Y ++G WF GG + L +C ++ + + A+L + L+ T+
Sbjct: 98 ATSMLSSYISRSVGANWFIENGGEKSLVEFCNSIMPQNPFNVLNFLVPAVLAGLVLMQTL 157
Query: 167 L 167
L
Sbjct: 158 L 158
>gi|6678824|ref|NP_032588.1| myeloid cell leukemia sequence 1 [Mus
musculus]
gi|3419871|gb|AAC31790.1| EAT/MCL-1 [Mus musculus]
gi|13277945|gb|AAH03839.1| myeloid cell leukemia sequence 1 [Mus
musculus]
gi|13529365|gb|AAH05427.1| myeloid cell leukemia sequence 1 [Mus
musculus]
gi|18203791|gb|AAH21638.1| myeloid cell leukemia sequence 1 [Mus
musculus]
Length = 331
Score = 46.6 bits (109), Expect = 2e-04
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 42 GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
G+ R+ E+ F+ ML + + + M+ V DG NWGR + +++FG+FVA+ L
Sbjct: 200 GVQRNHETAFQGMLRKLDIKNEGDVKSFSRVMVHVFKDGVTNWGRIVTLISFGAFVAKHL 259
Query: 102 ---SNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRG 136
+ E + A + V W + GW G
Sbjct: 260 KSVNQESFIEPLAETITDVLV--RTKRDWLVKQRGWDG 295
>gi|9631206|ref|NP_047987.1| orf 16; bcl-2 family member [Ateline
herpesvirus 3]
gi|11282537|pir||T42929 hypothetical protein - ateline herpesvirus
3 (strain 73)
gi|4019242|gb|AAC95540.1| orf 16; bcl-2 family member [Ateline
herpesvirus 3]
Length = 174
Score = 46.6 bits (109), Expect = 2e-04
Identities = 26/91 (28%), Positives = 46/91 (49%), Gaps = 6/91 (6%)
Query: 81 NMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRGLKAY 140
N NWG+ +A+++F Q + + R A + L Y +++G WF GG +GL +
Sbjct: 84 NTNWGKVVAMISFSVAALQTIDED--YRRVATSTLSSYIAKSVGVNWFIDHGGKKGLVEF 141
Query: 141 CTQVLTRRRGR----RMTALLGSIALLATIL 167
C +L++ + A+L I L+ T+L
Sbjct: 142 CDTILSKSNVTFSVFLLPAILTVIILIGTLL 172
>gi|6525063|gb|AAF15311.1|AF118278_1 Bcl-2-related protein
EAT/mcl1 [Homo sapiens]
Length = 94
Score = 46.6 bits (109), Expect = 2e-04
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 42 GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVA 98
G+ R+ E+ F+ ML + + + L M+ V DG NWGR + +++FG+FVA
Sbjct: 38 GVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVA 94
>gi|2370240|emb|CAA73630.1| Bcl2 like protein [Saimiriine
herpesvirus 2]
gi|30348519|emb|CAC84311.1| viral Bcl-2 [Saimiriine herpesvirus 2]
Length = 160
Score = 46.2 bits (108), Expect = 2e-04
Identities = 29/121 (23%), Positives = 58/121 (46%), Gaps = 7/121 (5%)
Query: 51 FEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDF 110
FEA++ + + G ++L ++ + NWG+ +A+L+F + V Q + E +
Sbjct: 41 FEALMPDFSLCVHDRLKFTGEAIL-LTTEHTTNWGKVVAMLSFSAAVLQTIDEE--YKCV 97
Query: 111 ALAVLPVYAYEAIGPQWFRARGGWRGLKAYCTQVLTRRRGRRMT----ALLGSIALLATI 166
A ++L Y ++G WF GG + L +C ++ + + A+L L+ T+
Sbjct: 98 ATSMLSSYIARSVGANWFMENGGEKSLVKFCNSIMPKNPFNVLNFLVPAVLAGFVLIQTL 157
Query: 167 L 167
L
Sbjct: 158 L 158
>gi|11177878|ref|NP_068618.1| myeloid cell leukemia sequence 1
[Rattus norvegicus]
gi|4235628|gb|AAD13295.1| Mcl-1 protein; Bcl-2-related protein
[Rattus norvegicus]
Length = 330
Score = 45.8 bits (107), Expect = 3e-04
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 42 GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
G+ R+ E+ F+ ML + + + M V DG NWGR + +++FG+FVA+ L
Sbjct: 199 GVQRNHETAFQGMLRKLDIKNEDDVKSFSRVMTHVFKDGVTNWGRIVTLISFGAFVAKHL 258
Query: 102 ---SNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRG 136
+ E + A ++ V W + GW G
Sbjct: 259 KSINQESCIEPLAESITDVLV--RTKRDWLVKQRGWDG 294
Database: nr
Posted date: Aug 27, 2003 10:37 AM
Number of letters in database: 485,782,529
Number of sequences in database: 1,508,275
Lambda K H
0.325 0.140 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,997,909
Number of Sequences: 1508275
Number of extensions: 5617115
Number of successful extensions: 15573
Number of sequences better than 1.0e-03: 19
Number of HSP's better than 0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 15554
Number of HSP's gapped (non-prelim): 19
length of query: 175
length of database: 485,782,529
effective HSP length: 115
effective length of query: 60
effective length of database: 312,330,904
effective search space: 18739854240
effective search space used: 18739854240
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 103 (44.3 bits)