BLAST Search Results

BLASTP 2.2.4 [Aug-26-2002]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KSHV017
         (175 letters)

Database: nr 
           1,508,275 sequences; 485,782,529 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|18845982|ref|NP_572068.1| ORF 16; functional anti-apoptotic f...   350   6e-96
gi|20663999|pdb|1K3K|A Chain A, Solution Structure Of A Bcl-2 Ho...   296   1e-79
gi|18653822|ref|NP_570756.1| Bcl-2 homolog [Macaca mulatta rhadi...   170   8e-42
gi|4959471|gb|AAD34361.1|AF129421_1 Bcl-2 [Bovine herpesvirus 4]       70   2e-11
gi|13095593|ref|NP_076508.1| v-Bcl-2 protein [Bovine herpesvirus...    70   2e-11
gi|4883769|gb|AAD31644.1| myeloid cell leukemia protein MCL-1 [G...    50   1e-05
gi|476995|pir||A47476 BCL2 homolog MCL1 - human                        50   2e-05
gi|19862730|sp|Q07820|MCL1_HUMAN Induced myeloid leukemia cell d...    49   3e-05
gi|30583919|gb|AAP36208.1| Homo sapiens myeloid cell leukemia se...    49   3e-05
gi|11386165|ref|NP_068779.1| myeloid cell leukemia sequence 1 is...    49   3e-05
gi|32127949|dbj|BAC77771.1| Mcl-1 [Felis catus]                        49   3e-05
gi|6525061|gb|AAF15310.1|AF118277_1 Bcl-2-related protein EAT/mc...    48   6e-05
gi|23978940|dbj|BAC21258.1| Mcl-1 [Canis familiaris]                   47   1e-04
gi|9625972|ref|NP_040218.1| ORF 16 [Saimiriine herpesvirus 2] >g...    47   2e-04
gi|6678824|ref|NP_032588.1| myeloid cell leukemia sequence 1 [Mu...    47   2e-04
gi|9631206|ref|NP_047987.1| orf 16; bcl-2 family member [Ateline...    47   2e-04
gi|6525063|gb|AAF15311.1|AF118278_1 Bcl-2-related protein EAT/mc...    47   2e-04
gi|2370240|emb|CAA73630.1| Bcl2 like protein [Saimiriine herpesv...    46   2e-04
gi|11177878|ref|NP_068618.1| myeloid cell leukemia sequence 1 [R...    46   3e-04
>gi|18845982|ref|NP_572068.1| ORF 16; functional anti-apoptotic
           factor vBCL-2 homolog; EBV BHRF1 homolog [Human
           herpesvirus 8]
 gi|1718268|gb|AAC57097.1| ORF 16; functional anti-apoptotic factor
           vBCL-2 homolog; EBV BHRF1 homolog [Human herpesvirus 8]
 gi|1732568|gb|AAB39217.1| Bcl-2 [Human herpesvirus 8]
 gi|2246471|gb|AAB62596.1| ORF 16, v-bcl2, functional anti-apoptotic
           factor bcl-2 homolog [Human herpesvirus 8]
 gi|3551764|gb|AAC34944.1| unknown [Human herpesvirus 8]
          Length = 175

 Score =  350 bits (898), Expect = 6e-96
 Identities = 175/175 (100%), Positives = 175/175 (100%)

Query: 1   MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRF 60
           MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRF
Sbjct: 1   MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRF 60

Query: 61  HSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPVYAY 120
           HSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPVYAY
Sbjct: 61  HSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPVYAY 120

Query: 121 EAIGPQWFRARGGWRGLKAYCTQVLTRRRGRRMTALLGSIALLATILAAVAMSRR 175
           EAIGPQWFRARGGWRGLKAYCTQVLTRRRGRRMTALLGSIALLATILAAVAMSRR
Sbjct: 121 EAIGPQWFRARGGWRGLKAYCTQVLTRRRGRRMTALLGSIALLATILAAVAMSRR 175
>gi|20663999|pdb|1K3K|A Chain A, Solution Structure Of A Bcl-2
           Homolog From Kaposi's Sarcoma Virus
          Length = 158

 Score =  296 bits (758), Expect = 1e-79
 Identities = 144/146 (98%), Positives = 145/146 (98%)

Query: 1   MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRF 60
           MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRF
Sbjct: 1   MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRF 60

Query: 61  HSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPVYAY 120
           HSTTGI+QLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLP YAY
Sbjct: 61  HSTTGIDQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPAYAY 120

Query: 121 EAIGPQWFRARGGWRGLKAYCTQVLT 146
           EAIGPQWFRARGGWRGLKAYCTQVLT
Sbjct: 121 EAIGPQWFRARGGWRGLKAYCTQVLT 146
>gi|18653822|ref|NP_570756.1| Bcl-2 homolog [Macaca mulatta
           rhadinovirus]
 gi|4494920|gb|AAD21342.1| Bcl-2 homolog [Macaca mulatta
           rhadinovirus 17577]
 gi|7330005|gb|AAF59994.1|AF210726_15 Bcl-2 homolog [Macaca mulatta
           rhadinovirus 26-95]
          Length = 187

 Score =  170 bits (431), Expect = 8e-42
 Identities = 80/173 (46%), Positives = 114/173 (65%)

Query: 2   DEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRFH 61
           +E+ LP +V AIEGIF+ CGL + EYL+HP+ SPIK +I+  ++D   L+E +L +  + 
Sbjct: 15  NENSLPVDVYAIEGIFLYCGLGQAEYLHHPVFSPIKEFISAFLKDSARLYERLLRHTDYR 74

Query: 62  STTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPVYAYE 121
           S  G+N +G  MLQ++ DG  NWGRALA+L  G++V  K+ ++  L  FA+AVLPVYAYE
Sbjct: 75  SLRGLNAIGQGMLQINTDGRHNWGRALAVLGLGAYVVDKVKDDERLLTFAIAVLPVYAYE 134

Query: 122 AIGPQWFRARGGWRGLKAYCTQVLTRRRGRRMTALLGSIALLATILAAVAMSR 174
           A+  QWFR+ G W GL+ YC ++L  RR  R     G  A L  ++A  A+ R
Sbjct: 135 ALESQWFRSHGEWEGLRNYCERILRHRRNARRHMCYGVAAGLLALVALFAIRR 187
>gi|4959471|gb|AAD34361.1|AF129421_1 Bcl-2 [Bovine herpesvirus 4]
          Length = 226

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 40/145 (27%), Positives = 70/145 (47%), Gaps = 3/145 (2%)

Query: 1   MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRF 60
           M E  +   V  I  + + CG+   EYL HP+ +PIK+ +  ++R K+ +F   L N+  
Sbjct: 51  MAEQDMDEVVSTIRRLLVECGMGLEEYLEHPVTAPIKVAVQDVIRTKQDIFSNFLTNI-- 108

Query: 61  HSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL-SNEPHLRDFALAVLPVYA 119
           +S   +  LG ++  ++   + N GR +  + F  +V Q +   +P L    L +     
Sbjct: 109 NSVEDLETLGHAITTLNDYPSPNMGRVVCGIAFSVYVVQTVCKRKPLLVRCCLDIFTRAT 168

Query: 120 YEAIGPQWFRARGGWRGLKAYCTQV 144
            +A+   WF   GGW  L ++C  V
Sbjct: 169 VQALNVNWFLQEGGWPALASFCKVV 193
>gi|13095593|ref|NP_076508.1| v-Bcl-2 protein [Bovine herpesvirus 4]
 gi|12802543|gb|AAK07935.1|AF318573_15 v-Bcl-2 protein [Bovine
           herpesvirus 4]
          Length = 226

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 40/145 (27%), Positives = 70/145 (47%), Gaps = 3/145 (2%)

Query: 1   MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRF 60
           M E  +   V  I  + + CG+   EYL HP+ +PIK+ +  ++R K+ +F   L N+  
Sbjct: 51  MAEQDMDEVVSTIRRLLVECGMGLEEYLEHPVTAPIKVAVQDVIRTKQDIFSNFLTNI-- 108

Query: 61  HSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL-SNEPHLRDFALAVLPVYA 119
           +S   +  LG ++  ++   + N GR +  + F  +V Q +   +P L    L +     
Sbjct: 109 NSVEDLETLGHAITTLNDYPSPNMGRVVCGIAFSVYVVQTVCKRKPLLVRCCLDIFTRAT 168

Query: 120 YEAIGPQWFRARGGWRGLKAYCTQV 144
            +A+   WF   GGW  L ++C  V
Sbjct: 169 VQALNVNWFLQEGGWPALASFCKVV 193
>gi|4883769|gb|AAD31644.1| myeloid cell leukemia protein MCL-1
           [Gallus gallus]
          Length = 211

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 28/96 (29%), Positives = 48/96 (49%), Gaps = 1/96 (1%)

Query: 42  GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
           G+M+  E  F+ ML  +       +  +     QV  DG  NWGR + +++FG+FVA+ L
Sbjct: 76  GVMQKHELAFQGMLRKLEIKKEDDLQAVCEVAAQVFNDGVTNWGRVVTLISFGAFVAKHL 135

Query: 102 SNEPHLRDF-ALAVLPVYAYEAIGPQWFRARGGWRG 136
            +    +   +LA +   A  +   +W  ++GGW G
Sbjct: 136 KSINQEKCITSLAGIITDALVSSKREWLMSQGGWEG 171
>gi|476995|pir||A47476 BCL2 homolog MCL1 - human
          Length = 350

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 42  GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
           G+ R+ E++F+ ML  +   +   +  L   M+ V  DG  NWGR + +++FG+FVA+ L
Sbjct: 219 GVQRNHETVFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHL 278

Query: 102 ---SNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRG 136
              + E  +   A ++  V         W   + GW G
Sbjct: 279 KTINQESCIEPLAESITDVLV--RTKRDWLVKQRGWDG 314
>gi|19862730|sp|Q07820|MCL1_HUMAN Induced myeloid leukemia cell
           differentiation protein Mcl-1
 gi|7582271|gb|AAF64255.1|AF198614_1 Mcl-1 [Homo sapiens]
          Length = 350

 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 42  GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
           G+ R+ E+ F+ ML  +   +   +  L   M+ V  DG  NWGR + +++FG+FVA+ L
Sbjct: 219 GVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHL 278

Query: 102 ---SNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRG 136
              + E  +   A ++  V         W   + GW G
Sbjct: 279 KTINQESCIEPLAESITDVLV--RTKRDWLVKQRGWDG 314
>gi|30583919|gb|AAP36208.1| Homo sapiens myeloid cell leukemia
           sequence 1 (BCL2-related) [synthetic construct]
          Length = 351

 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 42  GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
           G+ R+ E+ F+ ML  +   +   +  L   M+ V  DG  NWGR + +++FG+FVA+ L
Sbjct: 219 GVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHL 278

Query: 102 ---SNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRG 136
              + E  +   A ++  V         W   + GW G
Sbjct: 279 KTINQESCIEPLAESITDVLV--RTKRDWLVKQRGWDG 314
>gi|11386165|ref|NP_068779.1| myeloid cell leukemia sequence 1
           isoform 1; induced myeloid leukemia cell differentiation
           protein Mcl-1 [Homo sapiens]
 gi|4235637|gb|AAD13299.1| myeloid cell leukemia sequence 1;
           EAT/mcl1 [Homo sapiens]
 gi|8388943|gb|AAF74821.1|AF147742_1 myeloid cell differentiation
           protein [Homo sapiens]
 gi|9857700|gb|AAG00896.1| myeloid cell leukemia protein 1 [Homo
           sapiens]
 gi|16877949|gb|AAH17197.1| Myeloid cell leukemia sequence 1,
           isoform 1 [Homo sapiens]
 gi|30582119|gb|AAP35286.1| myeloid cell leukemia sequence 1
           (BCL2-related) [Homo sapiens]
          Length = 350

 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 42  GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
           G+ R+ E+ F+ ML  +   +   +  L   M+ V  DG  NWGR + +++FG+FVA+ L
Sbjct: 219 GVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHL 278

Query: 102 ---SNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRG 136
              + E  +   A ++  V         W   + GW G
Sbjct: 279 KTINQESCIEPLAESITDVLV--RTKRDWLVKQRGWDG 314
>gi|32127949|dbj|BAC77771.1| Mcl-1 [Felis catus]
          Length = 350

 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 42  GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
           G+ R+ E+ F+ ML  +   +   +  L   M+ V  DG  NWGR + +++FG+FVA+ L
Sbjct: 219 GVQRNHETAFQGMLRKLDIKNENDVKSLSRVMVHVFSDGVTNWGRIVTLISFGAFVAKHL 278

Query: 102 ---SNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRG 136
              + E  +   A ++  V         W   + GW G
Sbjct: 279 KSINQESCIEPLAESITDVLV--RTKRDWLVKQRGWDG 314
>gi|6525061|gb|AAF15310.1|AF118277_1 Bcl-2-related protein EAT/mcl1
           [Homo sapiens]
          Length = 108

 Score = 48.1 bits (113), Expect = 6e-05
 Identities = 21/60 (35%), Positives = 35/60 (58%)

Query: 42  GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
           G+ R+ E+ F+ ML  +   +   +  L   M+ V  DG  NWGR + +++FG+FVA+ L
Sbjct: 38  GVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHL 97
>gi|23978940|dbj|BAC21258.1| Mcl-1 [Canis familiaris]
          Length = 350

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 42  GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
           G+ R+ E+ F+ ML  +   +   +  L   ++ V  DG  NWGR + +++FG+FVA+ L
Sbjct: 219 GVQRNHETAFQGMLRKLDIKNEDDVKSLSRVIVHVFSDGVTNWGRIVTLISFGAFVAKHL 278

Query: 102 ---SNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRG 136
              + E  +   A ++  V         W   + GW G
Sbjct: 279 KSINQESCIEPLAESITDVLV--RTKRDWLVKQRGWDG 314
>gi|9625972|ref|NP_040218.1| ORF 16 [Saimiriine herpesvirus 2]
 gi|267314|sp|Q01001|VG16_HSVSA Bcl-2-like gene 16 protein
 gi|76661|pir||G36807 hypothetical protein ORF16 - saimiriine
           herpesvirus 1  (strain 11)
 gi|60337|emb|CAA45639.1| unnamed protein product [Saimiriine
           herpesvirus 2]
          Length = 160

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 30/121 (24%), Positives = 59/121 (47%), Gaps = 7/121 (5%)

Query: 51  FEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDF 110
           FEA++ +        I   G ++L ++ +   NWG+ +A+L+F + V Q +  E   +  
Sbjct: 41  FEALMPDFSLCVHDRIKFTGEAIL-LTTEHTTNWGKVVAMLSFSAAVLQTIDEE--YKCV 97

Query: 111 ALAVLPVYAYEAIGPQWFRARGGWRGLKAYCTQVLTRRRGRRMT----ALLGSIALLATI 166
           A ++L  Y   ++G  WF   GG + L  +C  ++ +     +     A+L  + L+ T+
Sbjct: 98  ATSMLSSYISRSVGANWFIENGGEKSLVEFCNSIMPQNPFNVLNFLVPAVLAGLVLMQTL 157

Query: 167 L 167
           L
Sbjct: 158 L 158
>gi|6678824|ref|NP_032588.1| myeloid cell leukemia sequence 1 [Mus
           musculus]
 gi|3419871|gb|AAC31790.1| EAT/MCL-1 [Mus musculus]
 gi|13277945|gb|AAH03839.1| myeloid cell leukemia sequence 1 [Mus
           musculus]
 gi|13529365|gb|AAH05427.1| myeloid cell leukemia sequence 1 [Mus
           musculus]
 gi|18203791|gb|AAH21638.1| myeloid cell leukemia sequence 1 [Mus
           musculus]
          Length = 331

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 5/98 (5%)

Query: 42  GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
           G+ R+ E+ F+ ML  +   +   +      M+ V  DG  NWGR + +++FG+FVA+ L
Sbjct: 200 GVQRNHETAFQGMLRKLDIKNEGDVKSFSRVMVHVFKDGVTNWGRIVTLISFGAFVAKHL 259

Query: 102 ---SNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRG 136
              + E  +   A  +  V         W   + GW G
Sbjct: 260 KSVNQESFIEPLAETITDVLV--RTKRDWLVKQRGWDG 295
>gi|9631206|ref|NP_047987.1| orf 16; bcl-2 family member [Ateline
           herpesvirus 3]
 gi|11282537|pir||T42929 hypothetical protein - ateline herpesvirus
           3 (strain 73)
 gi|4019242|gb|AAC95540.1| orf 16; bcl-2 family member [Ateline
           herpesvirus 3]
          Length = 174

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 26/91 (28%), Positives = 46/91 (49%), Gaps = 6/91 (6%)

Query: 81  NMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRGLKAY 140
           N NWG+ +A+++F     Q +  +   R  A + L  Y  +++G  WF   GG +GL  +
Sbjct: 84  NTNWGKVVAMISFSVAALQTIDED--YRRVATSTLSSYIAKSVGVNWFIDHGGKKGLVEF 141

Query: 141 CTQVLTRRRGR----RMTALLGSIALLATIL 167
           C  +L++         + A+L  I L+ T+L
Sbjct: 142 CDTILSKSNVTFSVFLLPAILTVIILIGTLL 172
>gi|6525063|gb|AAF15311.1|AF118278_1 Bcl-2-related protein
          EAT/mcl1 [Homo sapiens]
          Length = 94

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 20/57 (35%), Positives = 33/57 (57%)

Query: 42 GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVA 98
          G+ R+ E+ F+ ML  +   +   +  L   M+ V  DG  NWGR + +++FG+FVA
Sbjct: 38 GVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVA 94
>gi|2370240|emb|CAA73630.1| Bcl2 like protein [Saimiriine
           herpesvirus 2]
 gi|30348519|emb|CAC84311.1| viral Bcl-2 [Saimiriine herpesvirus 2]
          Length = 160

 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 29/121 (23%), Positives = 58/121 (46%), Gaps = 7/121 (5%)

Query: 51  FEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHLRDF 110
           FEA++ +        +   G ++L ++ +   NWG+ +A+L+F + V Q +  E   +  
Sbjct: 41  FEALMPDFSLCVHDRLKFTGEAIL-LTTEHTTNWGKVVAMLSFSAAVLQTIDEE--YKCV 97

Query: 111 ALAVLPVYAYEAIGPQWFRARGGWRGLKAYCTQVLTRRRGRRMT----ALLGSIALLATI 166
           A ++L  Y   ++G  WF   GG + L  +C  ++ +     +     A+L    L+ T+
Sbjct: 98  ATSMLSSYIARSVGANWFMENGGEKSLVKFCNSIMPKNPFNVLNFLVPAVLAGFVLIQTL 157

Query: 167 L 167
           L
Sbjct: 158 L 158
>gi|11177878|ref|NP_068618.1| myeloid cell leukemia sequence 1
           [Rattus norvegicus]
 gi|4235628|gb|AAD13295.1| Mcl-1 protein; Bcl-2-related protein
           [Rattus norvegicus]
          Length = 330

 Score = 45.8 bits (107), Expect = 3e-04
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 5/98 (5%)

Query: 42  GLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKL 101
           G+ R+ E+ F+ ML  +   +   +      M  V  DG  NWGR + +++FG+FVA+ L
Sbjct: 199 GVQRNHETAFQGMLRKLDIKNEDDVKSFSRVMTHVFKDGVTNWGRIVTLISFGAFVAKHL 258

Query: 102 ---SNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRG 136
              + E  +   A ++  V         W   + GW G
Sbjct: 259 KSINQESCIEPLAESITDVLV--RTKRDWLVKQRGWDG 294
  Database: nr
    Posted date:  Aug 27, 2003 10:37 AM
  Number of letters in database: 485,782,529
  Number of sequences in database:  1,508,275
  
Lambda     K      H
   0.325    0.140    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,997,909
Number of Sequences: 1508275
Number of extensions: 5617115
Number of successful extensions: 15573
Number of sequences better than 1.0e-03: 19
Number of HSP's better than  0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 15554
Number of HSP's gapped (non-prelim): 19
length of query: 175
length of database: 485,782,529
effective HSP length: 115
effective length of query: 60
effective length of database: 312,330,904
effective search space: 18739854240
effective search space used: 18739854240
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 103 (44.3 bits)