R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|12585492|sp|Q9SWE7|VATE_CITLI VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E
SUBUNIT) (VACUOLAR PROTON PUMP E SUBUNIT) (CLVE-1)
>gi|5733660|gb|AAD49706.1| (AF165939) vacuolar V-H+ATPase subunit E
[Citrus limon]
Length = 230
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | | 230
0 50 100 150 200
Plus Strand HSPs:
Score = 282 (99.3 bits), Expect = 9.8e-24, P = 9.8e-24
Identities = 53/67 (79%), Positives = 58/67 (86%), Frame = +2
Query: 5 IIVDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQ 184
IIVD+ +YLPPGP HN+H CSGGVV+ASRDGKIVCENTLDARLDVVFRKKLPEIRKQ
Sbjct: 164 IIVDHHIYLPPGPGHHNAHGPSCSGGVVVASRDGKIVCENTLDARLDVVFRKKLPEIRKQ 223
Query: 185 LFGQIVA 205
L Q+ A
Sbjct: 224 LVSQVAA 230
>gi|12585474|sp|Q9MB46|VATE_CITUN VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E
SUBUNIT) (VACUOLAR PROTON PUMP E SUBUNIT)
>gi|6729085|dbj|BAA89661.1| (AB037106) vacuolar H+-ATPase E
subunit-1 [Citrus unshiu]
Length = 230
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | | 230
0 50 100 150 200
Plus Strand HSPs:
Score = 282 (99.3 bits), Expect = 9.8e-24, P = 9.8e-24
Identities = 53/67 (79%), Positives = 58/67 (86%), Frame = +2
Query: 5 IIVDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQ 184
IIVD+ +YLPPGP HN+H CSGGVV+ASRDGKIVCENTLDARLDVVFRKKLPEIRKQ
Sbjct: 164 IIVDHHIYLPPGPGHHNAHGPSCSGGVVVASRDGKIVCENTLDARLDVVFRKKLPEIRKQ 223
Query: 185 LFGQIVA 205
L Q+ A
Sbjct: 224 LVSQVAA 230
>gi|9652289|gb|AAF91469.1| (AF282970) putative vacuolar proton ATPase subunit E
[Lycopersicon esculentum]
Length = 237
Frame 2 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | | 237
0 50 100 150 200
Plus Strand HSPs:
Score = 269 (94.7 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 53/67 (79%), Positives = 58/67 (86%), Frame = +2
Query: 5 IIVDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQ 184
IIVD +++LPP PS HN H CSGGVVLASRDGKIVCENTLDARL+VVFRKKLPEIRK
Sbjct: 172 IIVD-EIHLPPAPSHHNMHGPSCSGGVVLASRDGKIVCENTLDARLEVVFRKKLPEIRKC 230
Query: 185 LFGQIVA 205
LFGQ+ A
Sbjct: 231 LFGQVAA 237
>gi|8096465|dbj|BAA94532.2| (AP001800) ESTs
D40069(S1808),D40089(S1834),AU083572(S1834) correspond to a region
of the predicted gene.~Similar to Citrus limon vacuolar V-H+ATPase
subunit E (AF165939) [Oryza sativa]
Length = 230
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | | 230
0 50 100 150 200
Plus Strand HSPs:
Score = 263 (92.6 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 50/67 (74%), Positives = 56/67 (83%), Frame = +2
Query: 5 IIVDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQ 184
I+VD VYLPP PS + +H CSGGVVLASRDGKIVCENTLDARL+VVFRKKLPEIR+
Sbjct: 164 IMVDRNVYLPPAPSHYEAHGPSCSGGVVLASRDGKIVCENTLDARLEVVFRKKLPEIRRS 223
Query: 185 LFGQIVA 205
L GQ+ A
Sbjct: 224 LLGQVAA 230
>gi|2129765|pir||S71261 V-type proton-ATPase - Arabidopsis thaliana
>gi|1143394|emb|CAA63086.1| (X92117) V-type proton-ATPase
[Arabidopsis thaliana]
Length = 230
Frame 2 hits (HSPs): _______________
Annotated Domains: ______
__________________________________________________
Database sequence: | | | | | | 230
0 50 100 150 200
__________________
Annotated Domains:
PROSITE LEUCINE_ZIPPER: Leucine zipper pattern. 125..146
__________________
Plus Strand HSPs:
Score = 254 (89.4 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 47/67 (70%), Positives = 55/67 (82%), Frame = +2
Query: 5 IIVDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQ 184
+ VD +++LPP P ++ H L+CSGGVVLASRDGKIVCENTLDARLDV FR KLP IRK
Sbjct: 164 VAVDTKIFLPPPPKSNDPHGLHCSGGVVLASRDGKIVCENTLDARLDVAFRMKLPVIRKS 223
Query: 185 LFGQIVA 205
LFGQ+ A
Sbjct: 224 LFGQVTA 230
>gi|12643432|sp|Q39258|VATE_ARATH VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E
SUBUNIT) (VACUOLAR PROTON PUMP E SUBUNIT) >gi|7447322|pir||T01918
H+-transporting ATPase (EC 3.6.1.35) chain E, vacuolar -
Arabidopsis thaliana >gi|3600058|gb|AAC35545.1| (AF080120) similar
to vacuolar ATPases [Arabidopsis thaliana]
>gi|4850294|emb|CAB43050.1| (AL049876) H+-transporting ATPase chain
E, vacuolar [Arabidopsis thaliana] >gi|7267814|emb|CAB81216.1|
(AL161531) H+-transporting ATPase chain E, vacuolar [Arabidopsis
thaliana]
Length = 230
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | | 230
0 50 100 150 200
Plus Strand HSPs:
Score = 254 (89.4 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 47/67 (70%), Positives = 55/67 (82%), Frame = +2
Query: 5 IIVDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQ 184
+ VD +++LPP P ++ H L+CSGGVVLASRDGKIVCENTLDARLDV FR KLP IRK
Sbjct: 164 VAVDTKIFLPPPPKSNDPHGLHCSGGVVLASRDGKIVCENTLDARLDVAFRMKLPVIRKS 223
Query: 185 LFGQIVA 205
LFGQ+ A
Sbjct: 224 LFGQVTA 230
>gi|3334411|sp|Q41396|VATE_SPIOL VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E
SUBUNIT) (VACUOLAR PROTON PUMP E SUBUNIT) >gi|7447323|pir||T09215
H+-transporting ATPase (EC 3.6.1.35) chain E, vacuolar - spinach
>gi|1263911|emb|CAA65581.1| (X96785) vacuolar H(+)-ATPase [Spinacia
oleracea]
Length = 229
Frame 2 hits (HSPs): _______________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | 229
0 50 100 150 200
__________________
Annotated Domains:
PFAM vATP-synt_E: ATP synthase (E/31 kDa) sub 16..224
PRODOM PD186788: VATE(4) O82502(1) Q9ZR97(1) 1..28
PRODOM PD005215: VATE(12) 30..223
__________________
Plus Strand HSPs:
Score = 245 (86.2 bits), Expect = 8.2e-20, P = 8.2e-20
Identities = 49/67 (73%), Positives = 55/67 (82%), Frame = +2
Query: 5 IIVDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQ 184
IIVD+ ++LP GPS H H L+CSGGVVLASRDGKIV ENTLDARL+V FRKKLP+IRKQ
Sbjct: 164 IIVDS-IHLPAGPSHHKEHGLHCSGGVVLASRDGKIVFENTLDARLEVAFRKKLPQIRKQ 222
Query: 185 LFGQIVA 205
LF A
Sbjct: 223 LFAVAAA 229
>gi|3334410|sp|Q40272|VATE_MESCR VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E
SUBUNIT) (VACUOLAR PROTON PUMP E SUBUNIT) >gi|7447321|pir||T12581
H+-transporting ATPase (EC 3.6.1.35) - common ice plant
>gi|1143509|emb|CAA63087.1| (X92118) V-type proton-ATPase
[Mesembryanthemum crystallinum]
Length = 226
Frame 2 hits (HSPs): ______________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 226
0 50 100 150 200
__________________
Annotated Domains:
PFAM vATP-synt_E: ATP synthase (E/31 kDa) sub 16..224
PRODOM PD186788: VATE(4) O82502(1) Q9ZR97(1) 1..28
PRODOM PD005215: VATE(12) 30..223
__________________
Plus Strand HSPs:
Score = 237 (83.4 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 45/62 (72%), Positives = 56/62 (90%), Frame = +2
Query: 5 IIVDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQ 184
+IVD+ ++LPP P+ ++SH+L CSGGVV+ASRDGKIV ENTLDARL+V FRKKLP+IRKQ
Sbjct: 164 VIVDD-IHLPPAPTSYDSHELSCSGGVVMASRDGKIVFENTLDARLEVAFRKKLPQIRKQ 222
Query: 185 LF 190
LF
Sbjct: 223 LF 224
>gi|3334405|sp|O23948|VATE_GOSHI VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E
SUBUNIT) (VACUOLAR PROTON PUMP E SUBUNIT) >gi|7447324|pir||T09848
H+-transporting ATPase (EC 3.6.1.35) chain E, vacuolar - upland
cotton >gi|2267583|gb|AAB72177.1| (AF009338) vacuolar H+-ATPase
subunit E [Gossypium hirsutum]
Length = 237
Frame 2 hits (HSPs): ________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 237
0 50 100 150 200
__________________
Annotated Domains:
PFAM vATP-synt_E: ATP synthase (E/31 kDa) sub 16..232
PRODOM PD186788: VATE(4) O82502(1) Q9ZR97(1) 1..28
PRODOM PD005215: VATE(12) 30..235
PROSITE LEUCINE_ZIPPER: Leucine zipper pattern. 125..146
__________________
Plus Strand HSPs:
Score = 237 (83.4 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 51/74 (68%), Positives = 58/74 (78%), Frame = +2
Query: 5 IIVDNQVYLPPGPSRHN--------SHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRK 160
IIVD+ V+LPPGPS H+ +H +CSGGVV+ASRDGKIV ENTLDARLDV F K
Sbjct: 164 IIVDD-VHLPPGPSHHHGFFHHHAEAHGPFCSGGVVIASRDGKIVFENTLDARLDVAFNK 222
Query: 161 KLPEIRKQLFGQIVA 205
KLPEIRK LFGQ+ A
Sbjct: 223 KLPEIRKWLFGQVAA 237
>gi|4099148|gb|AAD10335.1| (U84268) YLP [Hordeum vulgare]
Length = 227
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | | 227
0 50 100 150 200
Plus Strand HSPs:
Score = 228 (80.3 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 45/61 (73%), Positives = 50/61 (81%), Frame = +2
Query: 5 IIVDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQ 184
I+VD+ VYLPP PS + H C GGVVLASRDGKIV ENT+DARL+VVFRKKLPEIRK
Sbjct: 164 ILVDHSVYLPPSPSHDDKHGQICHGGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKL 223
Query: 185 L 187
L
Sbjct: 224 L 224
>gi|4099150|gb|AAD10336.1| (U84269) YLP [Hordeum vulgare]
Length = 227
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | | 227
0 50 100 150 200
Plus Strand HSPs:
Score = 228 (80.3 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 45/61 (73%), Positives = 50/61 (81%), Frame = +2
Query: 5 IIVDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQ 184
I+VD+ VYLPP PS + H C GGVVLASRDGKIV ENT+DARL+VVFRKKLPEIRK
Sbjct: 164 ILVDHSVYLPPSPSHDDKHGQICHGGVVLASRDGKIVFENTVDARLEVVFRKKLPEIRKL 223
Query: 185 L 187
L
Sbjct: 224 L 224
>gi|12322728|gb|AAG51352.1|AC012562_13 (AC012562) putative vacuolar ATP
synthase subunit E; 11053-12830 [Arabidopsis thaliana]
Length = 235
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | | 235
0 50 100 150 200
Plus Strand HSPs:
Score = 225 (79.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 44/65 (67%), Positives = 54/65 (83%), Frame = +2
Query: 5 IIVDNQVYLPPGPSRH--NSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIR 178
I +D +V+LPP P+ +SHD +CSGGVVLAS+DGKIVCENTLDARLDV FR+KLP+IR
Sbjct: 164 ITIDEKVFLPPPPNPKLPDSHDPHCSGGVVLASQDGKIVCENTLDARLDVAFRQKLPQIR 223
Query: 179 KQLFG 193
+L G
Sbjct: 224 TRLVG 228
>gi|6692094|gb|AAF24559.1|AC007764_1 (AC007764) F22C12.4 [Arabidopsis thaliana]
Length = 315
Frame 2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | | | 315
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 216 (76.0 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 41/56 (73%), Positives = 46/56 (82%), Frame = +2
Query: 5 IIVDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPE 172
IIVD ++LPP PS + H L C+GGVVLASRDGKIVCENTLDARL+V FR KLPE
Sbjct: 170 IIVDKDIFLPPAPSDDDPHALSCAGGVVLASRDGKIVCENTLDARLEVAFRNKLPE 225
>gi|12585387|sp|O00780|VATE_DICDI VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E
SUBUNIT) (VACUOLAR PROTON PUMP E SUBUNIT)
>gi|1912397|gb|AAB50982.1| (U49170) vacuolar H+-ATPase E subunit
[Dictyostelium discoideum]
Length = 233
Frame 2 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | | 233
0 50 100 150 200
Plus Strand HSPs:
Score = 151 (53.2 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 30/70 (42%), Positives = 48/70 (68%), Frame = +2
Query: 5 IIVDNQVYLPPGP-SRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRK 181
+ VD + +LP GP S +N C GGV+L++ +G+I+C+NTLD+RL++ F + P IR
Sbjct: 163 VSVDKERFLPQGPKSDYNGPT--CCGGVILSALEGRIICKNTLDSRLEICFDQLTPVIRT 220
Query: 182 QLFGQIVA*RF 214
QL+G + +F
Sbjct: 221 QLYGASTSRKF 231
>gi|12057152|emb|CAC19885.1| (AJ245933) V-type H(+)-ATPase subunit E [Beta
vulgaris]
Length = 186
Frame 2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | 186
0 50 100 150
Plus Strand HSPs:
Score = 110 (38.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 20/31 (64%), Positives = 27/31 (87%), Frame = +2
Query: 5 IIVDNQVYLPPGPSRHNSHDLYCSGGVVLAS 97
I+VD+ ++LPPGPS H++H L C+GGVVLAS
Sbjct: 157 IVVDD-IHLPPGPSHHHTHGLSCAGGVVLAS 186
>gi|3183196|sp|O13687|VATE_SCHPO VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E
SUBUNIT) (VACUOLAR PROTON PUMP E SUBUNIT) (V-ATPASE 26 KDA SUBUNIT)
>gi|7493598|pir||T37535 vacuolar atp synthase subunit - fission
yeast (Schizosaccharomyces pombe) >gi|2330665|emb|CAB11186.1|
(Z98595) vacuolar atp synthase subunit [Schizosaccharomyces pombe]
Length = 227
Frame 2 hits (HSPs): __________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 227
0 50 100 150 200
__________________
Annotated Domains:
PFAM vATP-synt_E: ATP synthase (E/31 kDa) sub 18..217
PRODOM PD208617: VATE_SCHPO 1..32
PRODOM PD005215: VATE(12) 34..224
__________________
Plus Strand HSPs:
Score = 109 (38.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 23/40 (57%), Positives = 29/40 (72%), Frame = +2
Query: 77 GGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQ 196
GGVVL GKI +NTL ARL++V + LPEIR+ LFG+
Sbjct: 180 GGVVLVGLGGKIRVDNTLRARLEIVKEEALPEIRRLLFGE 219
>gi|102981|pir||S25014 H+-transporting ATPase (EC 3.6.1.35) 28K chain - tobacco
hornworm
Length = 222
Frame 2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | 222
0 50 100 150 200
Plus Strand HSPs:
Score = 104 (36.6 bits), Expect = 0.00017, P = 0.00017
Identities = 24/62 (38%), Positives = 38/62 (61%), Frame = +2
Query: 11 VDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLF 190
+DN+ +LPP C GG+ L + G+I NTL++RL+++ ++ LPEIR LF
Sbjct: 163 IDNENFLPPDT---------C-GGIELIAAKGRIKISNTLESRLELIAQQLLPEIRNALF 212
Query: 191 GQ 196
G+
Sbjct: 213 GR 214
>gi|401332|sp|P31402|VATE_MANSE VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E
SUBUNIT) (VACUOLAR PROTON PUMP E SUBUNIT) (V-ATPASE 28 KDA SUBUNIT)
>gi|9733|emb|CAA47610.1| (X67131) H(+)-transporting ATPase
[Manduca sexta]
Length = 226
Frame 2 hits (HSPs): _____________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 226
0 50 100 150 200
__________________
Annotated Domains:
PFAM vATP-synt_E: ATP synthase (E/31 kDa) sub 18..216
PRODOM PD187021: VATE(5) 1..31
PRODOM PD005215: VATE(12) 33..225
__________________
Plus Strand HSPs:
Score = 104 (36.6 bits), Expect = 0.00018, P = 0.00018
Identities = 24/62 (38%), Positives = 38/62 (61%), Frame = +2
Query: 11 VDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLF 190
+DN+ +LPP C GG+ L + G+I NTL++RL+++ ++ LPEIR LF
Sbjct: 167 IDNENFLPPDT---------C-GGIELIAAKGRIKISNTLESRLELIAQQLLPEIRNALF 216
Query: 191 GQ 196
G+
Sbjct: 217 GR 218
>gi|12585495|sp|Q9U1G5|VATE_HETSC VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E
SUBUNIT) (VACUOLAR PROTON PUMP E SUBUNIT)
>gi|6562544|emb|CAB62552.1| (AJ249961) vacuolar ATPase subunit E
[Heterodera schachtii]
Length = 226
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | 226
0 50 100 150 200
Plus Strand HSPs:
Score = 102 (35.9 bits), Expect = 0.00030, P = 0.00030
Identities = 23/49 (46%), Positives = 32/49 (65%), Frame = +2
Query: 53 NSHDLY--CSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFG 193
N H L +GGV L ++DGKI +TL+ARLD++ K P++R LFG
Sbjct: 169 NEHFLSPESAGGVELLAKDGKIRVSSTLEARLDLIADKITPQVRTALFG 217
>gi|1718090|sp|P54611|VATE_DROME VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E
SUBUNIT) (VACUOLAR PROTON PUMP E SUBUNIT) (V-ATPASE 28 KDA SUBUNIT)
>gi|1033188|gb|AAB09738.1| (U38198) V-ATPase subunit E [Drosophila
melanogaster] >gi|1055352|gb|AAB09739.1| (U38951) vacuolar ATPase
subunit E [Drosophila melanogaster]
>gi|5052526|gb|AAD38593.1|AF145618_1 (AF145618) BcDNA.GH03683
[Drosophila melanogaster] >gi|7296718|gb|AAF51997.1| (AE003602)
Vha26 gene product [alt 1] [Drosophila melanogaster]
>gi|7296719|gb|AAF51998.1| (AE003602) Vha26 gene product [alt 2]
[Drosophila melanogaster]
Length = 226
Frame 2 hits (HSPs): ___________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 226
0 50 100 150 200
__________________
Annotated Domains:
PFAM vATP-synt_E: ATP synthase (E/31 kDa) sub 18..216
PRODOM PD187021: VATE(5) 1..31
PRODOM PD005215: VATE(12) 33..225
__________________
Plus Strand HSPs:
Score = 101 (35.6 bits), Expect = 0.00040, P = 0.00040
Identities = 21/46 (45%), Positives = 33/46 (71%), Frame = +2
Query: 77 GGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQIVA*RF 214
GGV L + +G+I NTL++RLD++ ++ +PEIR LFG+ V +F
Sbjct: 179 GGVELLALNGRIKVPNTLESRLDLISQQLVPEIRNALFGRNVNRKF 224
>gi|313014|emb|CAA50592.1| (X71491) vacuolar proton ATPase [Homo sapiens]
Length = 226
Frame 2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | 226
0 50 100 150 200
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.0014, P = 0.0014
Identities = 23/61 (37%), Positives = 37/61 (60%), Frame = +2
Query: 11 VDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLF 190
+D + YLP D+ +GGV + + D KI NTL++RLD++ ++ +PE+R LF
Sbjct: 167 IDQESYLP--------EDI--AGGVEIYNGDRKIKVSNTLESRLDLIAQQMMPEVRGALF 216
Query: 191 G 193
G
Sbjct: 217 G 217
>gi|4502317 ref|NP_001687.1| ATPase, H+ transporting, lysosomal (vacuolar
proton pump) 31kD; ATPase, H+ transporting, lysosomal (vacuolar
proton pump) 31kD; Vacuolar proton-ATPase, subunit E; V-ATPase,
subunit E; vacuolar proton-ATPase, subunit E; V-ATPase, subunit E
[Homo sapiens] >gi|549207|sp|P36543|VATE_HUMAN VACUOLAR ATP
SYNTHASE SUBUNIT E (V-ATPASE E SUBUNIT) (VACUOLAR PROTON PUMP E
SUBUNIT) (V-ATPASE 31 KDA SUBUNIT) (P31) >gi|2135325|pir||S60562
H+-transporting ATP synthase (EC 3.6.1.34) chain E, vacuolar -
human >gi|452658|emb|CAA53814.1| (X76228) vacuolar H+ ATPase E
subunit [Homo sapiens]
Length = 226
Frame 2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | 226
0 50 100 150 200
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.0014, P = 0.0014
Identities = 23/61 (37%), Positives = 37/61 (60%), Frame = +2
Query: 11 VDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLF 190
+D + YLP D+ +GGV + + D KI NTL++RLD++ ++ +PE+R LF
Sbjct: 167 IDQESYLP--------EDI--AGGVEIYNGDRKIKVSNTLESRLDLIAQQMMPEVRGALF 216
Query: 191 G 193
G
Sbjct: 217 G 217
>gi|539608|pir||A42666 H+-transporting ATPase (EC 3.6.1.35) 31K chain, vacuolar
- human
Length = 226
Frame 2 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | 226
0 50 100 150 200
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.0014, P = 0.0014
Identities = 23/61 (37%), Positives = 37/61 (60%), Frame = +2
Query: 11 VDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLF 190
+D + YLP D+ +GGV + + D KI NTL++RLD++ ++ +PE+R LF
Sbjct: 167 IDQESYLP--------EDI--AGGVEIYNGDRKIKVSNTLESRLDLIAQQMMPEVRGALF 216
Query: 191 G 193
G
Sbjct: 217 G 217
>gi|10720346|sp|O94072|VATE_CANAL VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E
SUBUNIT) (VACUOLAR PROTON PUMP E SUBUNIT) >gi|7493781|pir||T18254
H+-transporting ATPase (EC 3.6.1.35) E chain, vacuolar - yeast
(Candida albicans) >gi|3859688|emb|CAA22028.1| (AL033503) vacuolar
ATP synthase subunit E [Candida albicans]
Length = 226
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | 226
0 50 100 150 200
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.0014, P = 0.0014
Identities = 19/47 (40%), Positives = 30/47 (63%), Frame = +2
Query: 74 SGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQIVA*RF 214
+GG+V+ + GKI +NTL+ RL ++ + LP IR +LFG +F
Sbjct: 178 AGGIVVVNGSGKIEVDNTLEERLKILSEEALPAIRLELFGPSTTRKF 224
>gi|11526296 ref|XP_009823.1| ATPase, H+ transporting, lysosomal (vacuolar
proton pump) 31kD [Homo sapiens]
Length = 251
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | || 251
0 50 100 150 200 250
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.0018, P = 0.0018
Identities = 23/61 (37%), Positives = 37/61 (60%), Frame = +2
Query: 11 VDNQVYLPPGPSRHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLF 190
+D + YLP D+ +GGV + + D KI NTL++RLD++ ++ +PE+R LF
Sbjct: 192 IDQESYLP--------EDI--AGGVEIYNGDRKIKVSNTLESRLDLIAQQMMPEVRGALF 241
Query: 191 G 193
G
Sbjct: 242 G 242
>gi|137473|sp|P11019|VATE_BOVIN VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E
SUBUNIT) (VACUOLAR PROTON PUMP E SUBUNIT) (V-ATPASE 31 KDA SUBUNIT)
(P31) >gi|89601|pir||A31335 H+-transporting ATPase (EC 3.6.1.35)
31K chain, vacuolar - bovine >gi|163132|gb|AAA30562.1| (J03244) H+
ATPase 31kDa subunit (EC 3.6.1.3) [Bos taurus]
Length = 226
Frame 2 hits (HSPs): _________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 226
0 50 100 150 200
__________________
Annotated Domains:
DOMO DM06872: 1..225
PFAM vATP-synt_E: ATP synthase (E/31 kDa) sub 18..216
PRODOM PD187021: VATE(5) 1..31
PRODOM PD005215: VATE(12) 33..225
__________________
Plus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.0019, P = 0.0019
Identities = 18/40 (45%), Positives = 29/40 (72%), Frame = +2
Query: 74 SGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFG 193
+GGV + + D KI NTL++RLD++ ++ +PE+R LFG
Sbjct: 178 AGGVEIYNGDRKIKVSNTLESRLDLIAQQMMPEVRGALFG 217
>gi|6680756 ref|NP_031536.1| ATPase, H+ transporting lysosomal (vacuolar proton
pump), 32 kDa [Mus musculus] >gi|1718091|sp|P50518|VATE_MOUSE
VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E SUBUNIT) (VACUOLAR
PROTON PUMP E SUBUNIT) (V-ATPASE 31 KDA SUBUNIT) (P31)
>gi|1184663|gb|AAC52412.1| (U13841) vacuolar adenosine
triphosphatase subunit E [Mus musculus]
Length = 228
Frame 2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 228
0 50 100 150 200
Plus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.0019, P = 0.0019
Identities = 18/40 (45%), Positives = 29/40 (72%), Frame = +2
Query: 74 SGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFG 193
+GGV + + D KI NTL++RLD++ ++ +PE+R LFG
Sbjct: 180 AGGVEIYNGDRKIKVSNTLESRLDLIAQQMMPEVRGALFG 219
>gi|2493134|sp|Q01278|VATE_NEUCR VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E
SUBUNIT) (VACUOLAR PROTON PUMP E SUBUNIT) (V-ATPASE 26 KDA SUBUNIT)
>gi|600167|gb|AAA87901.1| (U17641) vacuolar ATPase 26 kDa subunit
[Neurospora crassa]
Length = 230
Frame 2 hits (HSPs): __________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 230
0 50 100 150 200
__________________
Annotated Domains:
PFAM vATP-synt_E: ATP synthase (E/31 kDa) sub 22..220
PRODOM PD208618: VATE_NEUCR 1..34
PRODOM PD005215: VATE(12) 36..229
__________________
Plus Strand HSPs:
Score = 92 (32.4 bits), Expect = 0.0084, P = 0.0084
Identities = 17/41 (41%), Positives = 28/41 (68%), Frame = +2
Query: 74 SGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQ 196
+GG+++ +GKI +NT +ARL ++ LP +RK LFG+
Sbjct: 182 AGGIIIVGGNGKIDIDNTFEARLTLLKDSALPAMRKALFGE 222
>gi|173169|gb|AAA35209.1| (M60663) vacuolar membrane ATPase [Saccharomyces
cerevisiae]
Length = 233
Frame 2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 233
0 50 100 150 200
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.14, P = 0.13
Identities = 18/40 (45%), Positives = 27/40 (67%), Frame = +2
Query: 74 SGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFG 193
SGGVV+++ KI NTL+ RL ++ + LP IR +L+G
Sbjct: 185 SGGVVVSNASDKIEINNTLEERLKLLSEEALPAIRLELYG 224
>gi|6324907 ref|NP_014977.1| vacuolar ATPase V1 domain subunit E (27 kDa);
Vma4p [Saccharomyces cerevisiae] >gi|1718092|sp|P22203|VATE_YEAST
VACUOLAR ATP SYNTHASE SUBUNIT E (V-ATPASE E SUBUNIT) (VACUOLAR
PROTON PUMP E SUBUNIT) (V-ATPASE 27 KDA SUBUNIT)
>gi|2131271|pir||S62063 H+-transporting ATPase (EC 3.6.1.35) 26K
chain, vacuolar [validated] - yeast (Saccharomyces cerevisiae)
>gi|1163067|emb|CAA89978.1| (Z49821) VMA4 [Saccharomyces
cerevisiae] >gi|1420724|emb|CAA99654.1| (Z75239) ORF YOR332w
[Saccharomyces cerevisiae]
Length = 233
Frame 2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 233
0 50 100 150 200
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.14, P = 0.13
Identities = 18/40 (45%), Positives = 27/40 (67%), Frame = +2
Query: 74 SGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFG 193
SGGVV+++ KI NTL+ RL ++ + LP IR +L+G
Sbjct: 185 SGGVVVSNASDKIEINNTLEERLKLLSEEALPAIRLELYG 224
>gi|2493110|sp|Q48329|VATE_HALVO V-TYPE ATP SYNTHASE SUBUNIT E (V-TYPE ATPASE
SUBUNIT E) >gi|11267058|pir||T47200 H+-transporting ATP synthase
(EC 3.6.1.34) chain D [validated] - Haloferax volcanii
>gi|693939|emb|CAA56048.1| (X79516) membrane ATPase [Haloferax
volcanii] >gi|1098054|prf||2115218A ATPase [Haloferax volcanii]
Length = 194
Frame 2 hits (HSPs): ___________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | 194
0 50 100 150
__________________
Annotated Domains:
PFAM vATP-synt_E: ATP synthase (E/31 kDa) sub 9..191
PRODOM PD001830: HSP1(29) VE2(21) GAG(12) 8..102
PRODOM PD030691: ATPE(2) O29104(1) 124..190
__________________
Plus Strand HSPs:
Score = 77 (27.1 bits), Expect = 3.0, P = 0.95
Identities = 15/40 (37%), Positives = 23/40 (57%), Frame = +2
Query: 71 CSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLF 190
C GGVV+ + ++ NT D+ LD V+ L E+ +LF
Sbjct: 152 CLGGVVVEGSNSRVRVNNTFDSVLDTVWEDNLKEVSARLF 191
>gi|7542422|gb|AAF63442.1| (AF210310) p53 tumor suppressor protein [Homo
sapiens]
Length = 32
Frame -3 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | 32
0 20
Minus Strand HSPs:
Score = 58 (20.4 bits), Expect = 7.9, P = 1.0
Identities = 11/18 (61%), Positives = 13/18 (72%), Frame = -3
Query: 196 LSKELLSDLWKLFTENYI 143
LS+E SDLWKL EN +
Sbjct: 14 LSQETFSDLWKLLPENNV 31
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.99
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.347 0.151 0.503
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.346 0.155 0.505
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.354 0.157 0.630
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.344 0.151 0.503
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.357 0.160 0.571
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.343 0.147 0.471
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 128 128 10. 72 3 12 22 0.11 33
29 0.12 35
+2 0 128 127 10. 72 3 12 22 0.10 33
29 0.12 35
+1 0 129 128 10. 72 3 12 22 0.11 33
29 0.12 35
-1 0 129 128 10. 72 3 12 22 0.11 33
29 0.12 35
-2 0 128 128 10. 72 3 12 22 0.11 33
29 0.12 35
-3 0 128 128 10. 72 3 12 22 0.11 33
29 0.12 35
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 32
No. of states in DFA: 595 (59 KB)
Total size of DFA: 173 KB (192 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 132.55u 1.04s 133.59t Elapsed: 00:00:53
Total cpu time: 132.59u 1.06s 133.65t Elapsed: 00:00:53
Start: Mon Feb 4 15:23:03 2002 End: Mon Feb 4 15:23:56 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000