R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|5103825|gb|AAD39655.1|AC007591_20 (AC007591) ESTs gb|AA650895, gb|AA720043
and gb|R29777 come from this gene. [Arabidopsis thaliana]
>gi|12484215|gb|AAG54006.1|AF336925_1 (AF336925) unknown protein
[Arabidopsis thaliana]
Length = 64
Frame 1 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | | | | 64
0 20 40 60
Plus Strand HSPs:
Score = 290 (102.1 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 55/64 (85%), Positives = 62/64 (96%), Frame = +1
Query: 133 MSTKQGGKAKPLKKPKSDKKDYDEVDMANIQKKKEEEKALKELKAKAQQKGSFGGSGLKK 312
MS+KQGGKAKPLK+PK+DKK+YDE D+ANIQKKK+EEKALKEL+AKA QKGSFGGSGLKK
Sbjct: 1 MSSKQGGKAKPLKQPKADKKEYDETDLANIQKKKDEEKALKELRAKASQKGSFGGSGLKK 60
Query: 313 SGKK 324
SGKK
Sbjct: 61 SGKK 64
>gi|9294450|dbj|BAB02669.1| (AB012247) gene_id:MSL1.7~unknown protein
[Arabidopsis thaliana]
Length = 62
Frame 1 hits (HSPs): ________________________________________________
__________________________________________________
Database sequence: | | | | | 62
0 20 40 60
Plus Strand HSPs:
Score = 244 (85.9 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 48/59 (81%), Positives = 53/59 (89%), Frame = +1
Query: 148 GGKAKPLKKPKSDKKDYDEVDMANIQKKKEEEKALKELKAKAQQKGSFGGSGLKKSGKK 324
GGK KPLK+PKS KK+YDE DM +QKKK+EEKALKEL+AKA QKGSFGGSGLKKSGKK
Sbjct: 4 GGKLKPLKQPKSGKKEYDEHDMELMQKKKDEEKALKELRAKASQKGSFGGSGLKKSGKK 62
>gi|7511888|pir||T13381 hypothetical protein 115C2.12 - fruit fly (Drosophila
melanogaster) >gi|4688661|emb|CAB41345.1| (AL031581)
/prediction=(method:""genefinder"", version:""084"",
score:""18.93"")~/prediction=(method:""genscan"", version:""1.0"",
score:""25.85"")~/match=(desc:""F49C12.11 PROTEIN"",
species:""CAENORHABDITIS ELEGANS"", ranges:(query:3059..3250,
target> >gi|7290062|gb|AAF45528.1| (AE003418) CG13364 gene product
[Drosophila melanogaster]
Length = 64
Frame 1 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | | | | 64
0 20 40 60
Plus Strand HSPs:
Score = 194 (68.3 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 39/64 (60%), Positives = 47/64 (73%), Frame = +1
Query: 133 MSTKQGGKAKPLKKPKSDKKDYDEVDMANIQKKKEEEKALKELKAKAQQKGSFGGSGLKK 312
MS ++GGK KPLK PK D KD DE DMA QK+KE++KAL+ KA A +KG G G+KK
Sbjct: 1 MSGREGGKKKPLKAPKKDSKDLDEDDMAFKQKQKEQQKALEAAKANASKKGPLVGGGIKK 60
Query: 313 SGKK 324
SGKK
Sbjct: 61 SGKK 64
>gi|7705431 ref|NP_057017.1| hypothetical protein [Homo sapiens]
>gi|4679018|gb|AAD26997.1| (AF077202) HSPC016 [Homo sapiens]
>gi|12654537|gb|AAH01102.1|AAH01102 (BC001102) hypothetical protein
[Homo sapiens]
Length = 64
Frame 1 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | | | | 64
0 20 40 60
Plus Strand HSPs:
Score = 185 (65.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 38/64 (59%), Positives = 46/64 (71%), Frame = +1
Query: 133 MSTKQGGKAKPLKKPKSDKKDYDEVDMANIQKKKEEEKALKELKAKAQQKGSFGGSGLKK 312
MS ++GGK KPLK+PK K+ DE D A QK+KEE+K L+ELKAKA KG G+KK
Sbjct: 1 MSGREGGKKKPLKQPKKQAKEMDEEDKAFKQKQKEEQKKLEELKAKAAGKGPLATGGIKK 60
Query: 313 SGKK 324
SGKK
Sbjct: 61 SGKK 64
>gi|12730068 ref|XP_003302.2| hypothetical protein [Homo sapiens]
Length = 76
Frame 1 hits (HSPs): ___________________________________________
__________________________________________________
Database sequence: | | | | | 76
0 20 40 60
Plus Strand HSPs:
Score = 185 (65.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 38/64 (59%), Positives = 46/64 (71%), Frame = +1
Query: 133 MSTKQGGKAKPLKKPKSDKKDYDEVDMANIQKKKEEEKALKELKAKAQQKGSFGGSGLKK 312
MS ++GGK KPLK+PK K+ DE D A QK+KEE+K L+ELKAKA KG G+KK
Sbjct: 13 MSGREGGKKKPLKQPKKQAKEMDEEDKAFKQKQKEEQKKLEELKAKAAGKGPLATGGIKK 72
Query: 313 SGKK 324
SGKK
Sbjct: 73 SGKK 76
>gi|7298038|gb|AAF53279.1| (AE003639) CG16824 gene product [Drosophila
melanogaster]
Length = 64
Frame 1 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | | | | 64
0 20 40 60
Plus Strand HSPs:
Score = 182 (64.1 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 36/64 (56%), Positives = 47/64 (73%), Frame = +1
Query: 133 MSTKQGGKAKPLKKPKSDKKDYDEVDMANIQKKKEEEKALKELKAKAQQKGSFGGSGLKK 312
M+ ++GGK KPLK PK D K+ DE DMA QK+KE++KA++ KA A +KG G G+KK
Sbjct: 1 MAGREGGKKKPLKAPKKDSKNLDEEDMAFKQKQKEQQKAMEAAKAGASKKGPLLGGGIKK 60
Query: 313 SGKK 324
SGKK
Sbjct: 61 SGKK 64
>gi|6841310|gb|AAF29008.1|AF161448_1 (AF161448) HSPC330 [Homo sapiens]
Length = 59
Frame 1 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | | | 59
0 20 40
Plus Strand HSPs:
Score = 174 (61.3 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 36/59 (61%), Positives = 42/59 (71%), Frame = +1
Query: 148 GGKAKPLKKPKSDKKDYDEVDMANIQKKKEEEKALKELKAKAQQKGSFGGSGLKKSGKK 324
GGK KPLK+PK K+ DE D A QK+KEE+K L+ELKAKA KG G+KKSGKK
Sbjct: 1 GGKKKPLKQPKKQAKEMDEEDKAFKQKQKEEQKKLEELKAKAAGKGPLATGGIKKSGKK 59
>gi|7503800|pir||T22415 hypothetical protein F49C12.11 - Caenorhabditis elegans
>gi|3877368|emb|CAA92514.1| (Z68227) cDNA EST EMBL:T01259 comes
from this gene~cDNA EST yk67d3.3 comes from this gene~cDNA EST
yk67d3.5 comes from this gene~cDNA EST yk136h3.3 comes from this
gene~cDNA EST yk136h3.5 comes from this gene~cDNA EST yk482b3.3
comes from this gene~cDN>
Length = 64
Frame 1 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | | | | 64
0 20 40 60
Plus Strand HSPs:
Score = 169 (59.5 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 35/64 (54%), Positives = 45/64 (70%), Frame = +1
Query: 133 MSTKQGGKAKPLKKPKSDKKDYDEVDMANIQKKKEEEKALKELKAKAQQKGSFGGSGLKK 312
MS +QGGKAKPLK K +KD E D+ +K++EE K +KE+ AKA Q+G G G+KK
Sbjct: 1 MSGRQGGKAKPLKAAKKTEKDLSEEDVEFKKKQQEEAKKIKEMAAKAGQRGPLLGGGIKK 60
Query: 313 SGKK 324
SGKK
Sbjct: 61 SGKK 64
>gi|6323292 ref|NP_013364.1| Ylr262c-ap [Saccharomyces cerevisiae]
>gi|2131800|pir||S72200 hypothetical protein YLR262c-a - yeast
(Saccharomyces cerevisiae)
Length = 64
Frame 1 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | | | | 64
0 20 40 60
Plus Strand HSPs:
Score = 135 (47.5 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 29/64 (45%), Positives = 40/64 (62%), Frame = +1
Query: 133 MSTKQGGKAKPLKKPKSDKKDYDEVDMANIQKKKEEEKALKELKAKAQQKGSFGGSGLKK 312
MS++QGGK KPLK+ K ++D D D+A +K+K + A K L A + G G+KK
Sbjct: 1 MSSRQGGKMKPLKQKKKQQQDLDPEDIAFKEKQKADAAAKKALMANMKSGKPLVGGGIKK 60
Query: 313 SGKK 324
SGKK
Sbjct: 61 SGKK 64
>gi|4494004|emb|CAB39063.1| (AL034559) F49C12.11-like protein [Plasmodium
falciparum]
Length = 54
Frame 1 hits (HSPs): ______________________________________________
__________________________________________________
Database sequence: | | | | 54
0 20 40
Plus Strand HSPs:
Score = 78 (27.5 bits), Expect = 0.11, P = 0.10
Identities = 22/49 (44%), Positives = 30/49 (61%), Frame = +1
Query: 145 QGGKAKPLKKPKSDKKDYDEVDMA----NIQKKKEEEKALKELKAKAQQK 282
QGGK KPLK K + E D+A +KKK EE+A ++L KA++K
Sbjct: 6 QGGKKKPLKAAKKGPVELTEEDIAFKKEMAEKKKAEEEAKQKL-LKAKKK 54
>gi|7486459|pir||T02461 hypothetical protein F4I18.16 - Arabidopsis thaliana
>gi|3386608|gb|AAC28538.1| (AC004665) hypothetical protein
[Arabidopsis thaliana]
Length = 79
Frame 1 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | 79
0 20 40 60
Plus Strand HSPs:
Score = 65 (22.9 bits), Expect = 3.0, P = 0.95
Identities = 16/34 (47%), Positives = 23/34 (67%), Frame = +1
Query: 217 NIQKKKE-EEKALKELKAKAQQKGSFGGSGLKKSG 318
N+QK+KE ++K +K+L A + K GSG KK G
Sbjct: 17 NLQKEKELQDKKIKKLHAN-KNKMKVDGSGKKKKG 50
>gi|2183055|gb|AAB64259.1| (U97509) cytochrome oxidase II [Muscidifurax
zaraptor]
Length = 99
Frame 3 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | 99
0 20 40 60 80
Plus Strand HSPs:
Score = 70 (24.6 bits), Expect = 3.3, P = 0.96
Identities = 12/40 (30%), Positives = 25/40 (62%), Frame = +3
Query: 315 WKEIRALYHDCIHPILSPVVYYHDNFCLIVAFFIALMLVL 434
WK+I ++ D PI+ ++ +HD+ L++ I+L+L +
Sbjct: 4 WKQI--MFQDSNSPIMESMIMFHDHGMLVIIIIISLILYI 41
>gi|1042189|gb|AAB34942.1| T2=testis-specific pro-protamine [Loligo
pealeii=squids, testis chromatin, Peptide, 79 aa]
Length = 79
Frame 2 hits (HSPs): ______________________________________
__________________________________________________
Database sequence: | | | | | 79
0 20 40 60
Plus Strand HSPs:
Score = 64 (22.5 bits), Expect = 3.9, P = 0.98
Identities = 26/64 (40%), Positives = 31/64 (48%), Frame = +2
Query: 149 VEKLSL*RNPSLIRRITTRLTWLTFRRKRKRRRR*RS*KP-RRNRREALEVLGSRKVERN 325
VEKL L + RR + R RR R+RRRR RS P RR RR R+ R
Sbjct: 12 VEKLDLLKGGRRRRRRSRR------RRSRRRRRRRRSRSPYRRRRRRRRRRSRRRRRYRR 65
Query: 326 KGSLS 340
+ S S
Sbjct: 66 RRSYS 70
>gi|10177250|dbj|BAB10718.1| (AB007644) gene_id:K19P17.4~unknown protein
[Arabidopsis thaliana]
Length = 66
Frame 1 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | | | | 66
0 20 40 60
Plus Strand HSPs:
Score = 61 (21.5 bits), Expect = 8.5, P = 1.0
Identities = 28/65 (43%), Positives = 33/65 (50%), Frame = +1
Query: 91 RFCFQTKP*LRIATMSTKQGG-KAKPLKKPKSDKKDYDEVDMANIQK--KKEEEKA-LKE 258
+F FQ M K G KA KPK +KK EV I+K KKEE+K KE
Sbjct: 2 KFLFQCPCCSCFCFMKPKPGKPKAVGDTKPKEEKKK--EVKKEEIKKEEKKEEKKEEKKE 59
Query: 259 LKA-KAQ 276
KA KA+
Sbjct: 60 TKAEKAE 66
>gi|3334471|sp|P46514|LE10_HELAN 10 KDA LATE EMBRYOGENESIS ABUNDANT PROTEIN
(DS10) >gi|2828229|emb|CAA42220.1| (X59699) 10 kDa Lea (Late
embryogenesis abundant) protein [Helianthus annuus]
>gi|3724199|emb|CAA11834.1| (AJ224116) lea group I [Helianthus
annuus]
Length = 92
Frame 1 hits (HSPs): ________________________________________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 92
0 20 40 60 80
__________________
Annotated Domains:
BLOCKS BL00431A: Small hydrophilic plant seed p 14..32
BLOCKS BL00431B: Small hydrophilic plant seed p 36..72
PFAM seed_protein: Small hydrophilic plant se 1..89
PRODOM PD002246: EM1(3) L194(2) 15..88
PROSITE SMALL_HYDR_PLANT_SEED: Small hydrophilic 27..35
__________________
Plus Strand HSPs:
Score = 65 (22.9 bits), Expect = 9.1, P = 1.0
Identities = 24/74 (32%), Positives = 37/74 (50%), Frame = +1
Query: 133 MSTKQGGKAKPLKKPKSDKKDYDE--------VDMANIQKKKEEEKALKELKAKAQQ--K 282
M+++QG + + K P+ +KKD D+ V K E ++ L E ++K Q K
Sbjct: 1 MASQQGQQTR--KIPEQEKKDLDQRAAKGETVVPGGTRGKSLEAQERLAEGRSKGGQTRK 58
Query: 283 GSFGGSGLKKSGKK*G 330
G G K+ GKK G
Sbjct: 59 DQLGTEGYKEMGKKGG 74
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.98
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.362 0.164 0.630
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.344 0.150 0.514
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.354 0.158 0.546
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.339 0.149 0.458
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.340 0.146 0.467
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.353 0.151 0.578
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 194 192 10. 76 3 12 22 0.12 34
31 0.098 38
+2 0 194 193 10. 76 3 12 22 0.12 34
31 0.099 38
+1 0 195 193 10. 76 3 12 22 0.12 34
31 0.099 38
-1 0 195 192 10. 76 3 12 22 0.12 34
31 0.098 38
-2 0 194 193 10. 76 3 12 22 0.12 34
31 0.099 38
-3 0 194 192 10. 76 3 12 22 0.12 34
31 0.098 38
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 15
No. of states in DFA: 589 (58 KB)
Total size of DFA: 212 KB (256 KB)
Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 194.56u 0.91s 195.47t Elapsed: 00:01:33
Total cpu time: 194.59u 0.93s 195.52t Elapsed: 00:01:33
Start: Fri Jan 18 15:40:53 2002 End: Fri Jan 18 15:42:26 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000