R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|31291|emb|CAA36016.1| (X51728) fumarylacetoacetase (AA 1-349) [Homo
sapiens]
Length = 349
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 349
0 150 300
Plus Strand HSPs:
Score = 113 (39.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 17/26 (65%), Positives = 24/26 (92%), Frame = +1
Query: 1 VILTGYCKGNGYSVGFGTCSGKIVPA 78
VI+TGYC+G+GY +GFG C+GK++PA
Sbjct: 320 VIITGYCQGDGYRIGFGQCAGKVLPA 345
>gi|3157928|gb|AAC17611.1| (AC002131) Similar to fumarylacetoacetate hydrolase,
gb|L41670 from Emericella nidulans. [Arabidopsis thaliana]
Length = 408
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | 408
0 150 300
Plus Strand HSPs:
Score = 114 (40.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 19/28 (67%), Positives = 24/28 (85%), Frame = +1
Query: 1 VILTGYCKGNGYSVGFGTCSGKIVPAAP 84
V +G CKG+GY+VGFGTC+GKIVP+ P
Sbjct: 381 VTFSGVCKGDGYNVGFGTCTGKIVPSPP 408
>gi|4557587 ref|NP_000128.1| fumarylacetoacetase [Homo sapiens]
>gi|119778|sp|P16930|FAAA_HUMAN FUMARYLACETOACETASE
(FUMARYLACETOACETATE HYDROLASE) (BETA-DIKETONASE) (FAA)
>gi|106043|pir||A37926 fumarylacetoacetase (EC 3.7.1.2) - human
>gi|182393|gb|AAA52422.1| (M55150) fumarylacetoacetate hydrolase
[Homo sapiens]
Length = 419
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | 419
0 150 300
Plus Strand HSPs:
Score = 113 (39.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 17/26 (65%), Positives = 24/26 (92%), Frame = +1
Query: 1 VILTGYCKGNGYSVGFGTCSGKIVPA 78
VI+TGYC+G+GY +GFG C+GK++PA
Sbjct: 390 VIITGYCQGDGYRIGFGQCAGKVLPA 415
>gi|12739036 ref|XP_007704.2| fumarylacetoacetase [Homo sapiens]
Length = 437
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | 437
0 150 300
Plus Strand HSPs:
Score = 113 (39.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 17/26 (65%), Positives = 24/26 (92%), Frame = +1
Query: 1 VILTGYCKGNGYSVGFGTCSGKIVPA 78
VI+TGYC+G+GY +GFG C+GK++PA
Sbjct: 408 VIITGYCQGDGYRIGFGQCAGKVLPA 433
>gi|8569274|pdb|1QCO|A Chain A, Crystal Structure Of Fumarylacetoacetate
Hydrolase Complexed With Fumarate And Acetoacetate
>gi|8569275|pdb|1QCO|B Chain B, Crystal Structure Of
Fumarylacetoacetate Hydrolase Complexed With Fumarate And
Acetoacetate
Length = 423
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | 423
0 150 300
Plus Strand HSPs:
Score = 110 (38.7 bits), Expect = 0.00014, P = 0.00014
Identities = 19/31 (61%), Positives = 27/31 (87%), Frame = +1
Query: 1 VILTGYCKGNGYSVGFGTCSGKIVPA-AP*G 90
VI+TG+C+G+GY VGFG C+GK++PA +P G
Sbjct: 392 VIITGHCQGDGYRVGFGQCAGKVLPALSPAG 422
>gi|6753814 ref|NP_034306.1| fumarylacetoacetate hydrolase [Mus musculus]
>gi|1083328|pir||A56825 fumarylacetoacetase (EC 3.7.1.2) - mouse
>gi|50973|emb|CAA77819.1| (Z11774) fumarylacetoacetase [Mus
musculus]
Length = 419
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | 419
0 150 300
Plus Strand HSPs:
Score = 109 (38.4 bits), Expect = 0.00017, P = 0.00017
Identities = 17/26 (65%), Positives = 24/26 (92%), Frame = +1
Query: 1 VILTGYCKGNGYSVGFGTCSGKIVPA 78
VI+TG+C+G+GY VGFG C+GK++PA
Sbjct: 390 VIITGHCQGDGYRVGFGQCAGKVLPA 415
>gi|8393349 ref|NP_058877.1| fumarylacetoacetate hydrolase [Rattus norvegicus]
>gi|119779|sp|P25093|FAAA_RAT FUMARYLACETOACETASE
(FUMARYLACETOACETATE HYDROLASE) (BETA-DIKETONASE) (FAA)
>gi|92242|pir||JH0467 fumarylacetoacetase (EC 3.7.1.2) - rat
>gi|204090|gb|AAA41142.1| (M77694) fumarylacetoacetate hydrolase
[Rattus norvegicus]
Length = 419
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | 419
0 150 300
Plus Strand HSPs:
Score = 109 (38.4 bits), Expect = 0.00017, P = 0.00017
Identities = 17/26 (65%), Positives = 24/26 (92%), Frame = +1
Query: 1 VILTGYCKGNGYSVGFGTCSGKIVPA 78
VI+TG+C+G+GY VGFG C+GK++PA
Sbjct: 390 VIITGHCQGDGYRVGFGQCAGKVLPA 415
>gi|544273|sp|P35505|FAAA_MOUSE FUMARYLACETOACETASE (FUMARYLACETOACETATE
HYDROLASE) (BETA-DIKETONASE) (FAA) >gi|284750|pir||A40219
fumarylacetoacetate hydrolase - mouse >gi|8569283|pdb|1QQJ|A Chain
A, Crystal Structure Of Mouse Fumarylacetoacetate Hydrolase Refined
At 1.55 Angstrom Resolution >gi|8569284|pdb|1QQJ|B Chain B, Crystal
Structure Of Mouse Fumarylacetoacetate Hydrolase Refined At 1.55
Angstrom Resolution >gi|193222|gb|AAA37591.1| (M84145)
fumarylacetoacetate hydrolase [Mus musculus]
Length = 419
Frame 1 hits (HSPs): ____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 419
0 150 300
__________________
Annotated Domains:
PFAM FAA_hydrolase: Fumarylacetoacetate (FAA) 145..359
PRODOM PD009659: FAAA(3) Q94272(1) O65374(1) 1..162
PRODOM PD002459: FAAA(3) HPCE(2) Q46978(2) 164..263
PRODOM PD009658: FAAA(3) Q94272(1) O65374(1) 266..414
PROSITE BZIP_BASIC: bZIP transcription factors b 82..97
__________________
Plus Strand HSPs:
Score = 109 (38.4 bits), Expect = 0.00017, P = 0.00017
Identities = 17/26 (65%), Positives = 24/26 (92%), Frame = +1
Query: 1 VILTGYCKGNGYSVGFGTCSGKIVPA 78
VI+TG+C+G+GY VGFG C+GK++PA
Sbjct: 390 VIITGHCQGDGYRVGFGQCAGKVLPA 415
>gi|253320|gb|AAB22822.1| fumarylacetoacetate hydrolase, FAH [mice, Peptide,
419 aa]
Length = 419
Frame 1 hits (HSPs): ____
Annotated Domains: ___
__________________________________________________
Database sequence: | | | | 419
0 150 300
__________________
Annotated Domains:
PROSITE BZIP_BASIC: bZIP transcription factors b 82..97
__________________
Plus Strand HSPs:
Score = 109 (38.4 bits), Expect = 0.00017, P = 0.00017
Identities = 17/26 (65%), Positives = 24/26 (92%), Frame = +1
Query: 1 VILTGYCKGNGYSVGFGTCSGKIVPA 78
VI+TG+C+G+GY VGFG C+GK++PA
Sbjct: 390 VIITGHCQGDGYRVGFGQCAGKVLPA 415
>gi|8569272|pdb|1QCN|A Chain A, Crystal Structure Of Fumarylacetoacetate
Hydrolase >gi|8569273|pdb|1QCN|B Chain B, Crystal Structure Of
Fumarylacetoacetate Hydrolase
Length = 421
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | 421
0 150 300
Plus Strand HSPs:
Score = 109 (38.4 bits), Expect = 0.00017, P = 0.00017
Identities = 17/26 (65%), Positives = 24/26 (92%), Frame = +1
Query: 1 VILTGYCKGNGYSVGFGTCSGKIVPA 78
VI+TG+C+G+GY VGFG C+GK++PA
Sbjct: 392 VIITGHCQGDGYRVGFGQCAGKVLPA 417
>gi|7292429|gb|AAF47833.1| (AE003480) CG14993 gene product [Drosophila
melanogaster]
Length = 349
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | 349
0 150 300
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 0.019, P = 0.019
Identities = 14/28 (50%), Positives = 21/28 (75%), Frame = +1
Query: 1 VILTGYCKGNGYSVGFGTCSGKIVPAAP 84
VI+ G+C+ NG +GFG C G+++PA P
Sbjct: 319 VIIRGHCEKNGLRIGFGECVGQVLPAHP 346
>gi|7505698|pir||T25813 hypothetical protein K10C2.4 - Caenorhabditis elegans
>gi|1515342|gb|AAB06900.1| (U39852) coded for by C. elegans cDNA
yk83g11.5; coded for by C. elegans cDNA yk59b11.5; coded for by C.
elegans cDNA yk101c4.5; coded for by C. elegans cDNA yk108e2.5;
coded for by C. elegans cDNA cm15b10; coded for by C. elegans cDNA
yk62c7.5; coded >
Length = 418
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | 418
0 150 300
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 0.11, P = 0.10
Identities = 14/26 (53%), Positives = 19/26 (73%), Frame = +1
Query: 1 VILTGYCKGNGYSVGFGTCSGKIVPA 78
V L+G C+ NG +GFG C GK++PA
Sbjct: 391 VNLSGVCEKNGVRIGFGECRGKVLPA 416
>gi|12313291|emb|CAC24418.1| (AL512978) Hypothetical [Sulfolobus solfataricus]
Length = 512
Frame 3 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | 512
0 150 300 450
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 0.18, P = 0.17
Identities = 22/69 (31%), Positives = 33/69 (47%), Frame = +3
Query: 18 LQGKWLLCWVWYLLRQDCTRSSMRLVSFHSLFQLWWEELYNQEPACLIYSAHNMTLIKLV 197
L G LC + Y + T S+ + S QLW + L N P + YS ++ +
Sbjct: 307 LSGYVPLCMIVYTY--NLTNSNSGFYTVGSYSQLWIKPLDNNSPVYITYSGYSYS----- 359
Query: 198 FYEYYTFSF 224
+YEYY F+F
Sbjct: 360 YYEYYNFTF 368
>gi|11348567|pir||E83394 fumarylacetoacetase PA2008 [imported] - Pseudomonas
aeruginosa (strain PAO1) >gi|9948011|gb|AAG05396.1|AE004627_4
(AE004627) fumarylacetoacetase [Pseudomonas aeruginosa]
Length = 432
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | 432
0 150 300
Plus Strand HSPs:
Score = 76 (26.8 bits), Expect = 0.65, P = 0.48
Identities = 15/29 (51%), Positives = 19/29 (65%), Frame = +1
Query: 1 VILTGYCKGNGY-SVGFGTCSGKIVPAAP 84
VIL CK G+ S+GFG C GK++ A P
Sbjct: 400 VILRARCKREGHVSIGFGECRGKVLAALP 428
>gi|110562|pir||S25462 Ig kappa chain V region - mouse
>gi|938263|emb|CAA47881.1| (X67623) IgG light chain V region [Mus
musculus]
Length = 91
Frame 3 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | | | 91
0 20 40 60 80
Plus Strand HSPs:
Score = 62 (21.8 bits), Expect = 4.0, P = 0.98
Identities = 16/44 (36%), Positives = 24/44 (54%), Frame = +3
Query: 57 LRQDCT---RSSMRLVSFHSLFQLWWEELYNQEPACLIYSAHNM 179
LRQ T R+S + S+ + F W+++ Q P LIY A N+
Sbjct: 15 LRQRATISCRASESVDSYGNSFMHWYQQKPGQPPKLLIYHASNL 58
>gi|197274|gb|AAA38993.1| (M31268) IgK chain [Mus musculus]
Length = 110
Frame 3 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | | 110
0 20 40 60 80 100
Plus Strand HSPs:
Score = 64 (22.5 bits), Expect = 7.7, P = 1.0
Identities = 16/44 (36%), Positives = 24/44 (54%), Frame = +3
Query: 57 LRQDCT---RSSMRLVSFHSLFQLWWEELYNQEPACLIYSAHNM 179
LRQ T R+S + S+ + F W+++ Q P LIY A N+
Sbjct: 15 LRQRATISCRASESVDSYGNSFMYWYQQKPGQPPKLLIYRASNL 58
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.98
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.341 0.148 0.561
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.353 0.159 0.536
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.366 0.169 0.638
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.362 0.158 0.610
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.334 0.142 0.474
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.357 0.164 0.538
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 96 96 10. 66 3 12 22 0.10 32
28 0.095 34
+2 0 97 97 10. 66 3 12 22 0.10 32
28 0.097 34
+1 0 97 97 10. 66 3 12 22 0.10 32
28 0.097 34
-1 0 97 97 10. 66 3 12 22 0.10 32
28 0.097 34
-2 0 97 97 10. 66 3 12 22 0.10 32
28 0.097 34
-3 0 96 96 10. 66 3 12 22 0.10 32
28 0.095 34
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 16
No. of states in DFA: 590 (58 KB)
Total size of DFA: 154 KB (192 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 103.43u 1.16s 104.59t Elapsed: 00:00:18
Total cpu time: 103.46u 1.18s 104.64t Elapsed: 00:00:18
Start: Thu Jan 17 11:03:15 2002 End: Thu Jan 17 11:03:33 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000