BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= BVCTN19
(672 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|53711424|ref|YP_097416.1| putative mobilization protein ... 1377 0.0
gi|29347716|ref|NP_811219.1| putative mobilization protein ... 1122 0.0
gi|156862360|gb|EDO55791.1| hypothetical protein BACUNI_006... 1103 0.0
gi|60680770|ref|YP_210914.1| putative transmembrane mobilis... 1101 0.0
gi|53712661|ref|YP_098653.1| putative mobilization protein ... 1095 0.0
gi|60681250|ref|YP_211394.1| putative transmembrane TraG/Tr... 1069 0.0
gi|29345512|ref|NP_809015.1| hypothetical protein BT_0102 [... 1065 0.0
gi|34541157|ref|NP_905636.1| TraG family protein [Porphyrom... 1057 0.0
gi|29348024|ref|NP_811527.1| putative mobilization protein ... 1050 0.0
gi|156112113|gb|EDO13858.1| hypothetical protein BACOVA_004... 1041 0.0
gi|146300768|ref|YP_001195359.1| hypothetical protein Fjoh_... 1025 0.0
gi|150003263|ref|YP_001298007.1| putative mobilization prot... 1024 0.0
gi|29350166|ref|NP_813669.1| putative mobilization protein ... 813 0.0
gi|150004655|ref|YP_001299399.1| putative mobilization prot... 808 0.0
gi|156861370|gb|EDO54801.1| hypothetical protein BACUNI_017... 713 0.0
gi|146301499|ref|YP_001196090.1| Type IV secretory pathway ... 681 0.0
gi|146302116|ref|YP_001196707.1| Type IV secretory pathway ... 656 0.0
gi|146301306|ref|YP_001195897.1| Type IV secretory pathway ... 643 0.0
gi|156861367|gb|EDO54798.1| hypothetical protein BACUNI_017... 607 e-172
gi|156859764|gb|EDO53195.1| hypothetical protein BACUNI_032... 594 e-168
gi|10444283|gb|AAG17844.1|AF289050_19 unknown [Bacteroides ... 475 e-132
gi|156859760|gb|EDO53191.1| hypothetical protein BACUNI_032... 473 e-131
gi|52421250|ref|YP_087162.1| putative mobilization protein ... 461 e-128
gi|60650159|ref|YP_209712.1| putative plasmid transfer prot... 440 e-121
gi|156107162|gb|EDO08907.1| hypothetical protein BACOVA_047... 339 3e-91
gi|145308114|gb|ABP57300.1| hypothetical protein bst027 [Ba... 333 2e-89
gi|53714107|ref|YP_100099.1| putative mobilization protein ... 332 8e-89
gi|156110068|gb|EDO11813.1| hypothetical protein BACOVA_023... 227 2e-57
gi|150005887|ref|YP_001300631.1| putative mobilization prot... 224 1e-56
gi|150024585|ref|YP_001295411.1| Putative mobilization prot... 199 5e-49
gi|120435711|ref|YP_861397.1| TraG/TraD family protein [Gra... 125 9e-27
gi|86141444|ref|ZP_01059990.1| mobilisation protein C [Flav... 123 4e-26
gi|60681021|ref|YP_211165.1| mobilisation protein C [Bacter... 110 2e-22
gi|156859276|gb|EDO52707.1| hypothetical protein BACUNI_035... 110 4e-22
gi|4164093|gb|AAD05339.1| BfmC [Bacteroides fragilis] 109 6e-22
gi|150003538|ref|YP_001298282.1| mobilisation protein C [Ba... 107 4e-21
gi|17233229|ref|NP_490319.1| hypothetical protein alr7213 [... 99 9e-19
gi|150006205|ref|YP_001300949.1| mobilisation protein C [Ba... 98 2e-18
gi|75812307|ref|YP_319926.1| transfer complex protein TrsK-... 98 2e-18
gi|23130203|ref|ZP_00112022.1| COG3505: Type IV secretory p... 96 6e-18
gi|29611508|ref|NP_818961.1| mobilization protein C [Bacter... 96 9e-18
gi|150005980|ref|YP_001300724.1| mobilisation protein C [Ba... 95 1e-17
gi|23127668|ref|ZP_00109533.1| COG3505: Type IV secretory p... 92 9e-17
gi|17158675|ref|NP_478186.1| hypothetical protein alr7539 [... 89 7e-16
gi|75812705|ref|YP_320322.1| hypothetical protein Ava_C0044... 88 2e-15
gi|126660598|ref|ZP_01731701.1| hypothetical protein CY0110... 88 2e-15
gi|23128610|ref|ZP_00110453.1| COG3505: Type IV secretory p... 72 2e-10
gi|126660594|ref|ZP_01731698.1| transfer complex protein Tr... 69 8e-10
gi|17227411|ref|NP_478462.1| hypothetical protein all8037 [... 69 1e-09
gi|150004656|ref|YP_001299400.1| putative transmembrane mob... 67 5e-09
gi|53687850|ref|ZP_00345455.1| COG3505: Type IV secretory p... 65 2e-08
gi|89893601|ref|YP_517088.1| hypothetical protein DSY0855 [... 57 6e-06
>gi|53711424|ref|YP_097416.1| putative mobilization protein [Bacteroides fragilis YCH46]
gi|154490877|ref|ZP_02030818.1| hypothetical protein PARMER_00794 [Parabacteroides merdae ATCC
43184]
gi|46242795|gb|AAS83500.1| MobC [Bacteroides fragilis]
gi|52214289|dbj|BAD46882.1| putative mobilization protein [Bacteroides fragilis YCH46]
gi|154088625|gb|EDN87669.1| hypothetical protein PARMER_00794 [Parabacteroides merdae ATCC
43184]
Length = 672
Score = 1377 bits (3563), Expect = 0.0, Method: Composition-based stats.
Identities = 672/672 (100%), Positives = 672/672 (100%)
Query: 1 MSQQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAG 60
MSQQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAG
Sbjct: 1 MSQQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAG 60
Query: 61 LFHSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPL 120
LFHSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPL
Sbjct: 61 LFHSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPL 120
Query: 121 EAVTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNL 180
EAVTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNL
Sbjct: 121 EAVTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNL 180
Query: 181 PTRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKY 240
PTRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKY
Sbjct: 181 PTRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKY 240
Query: 241 PDLSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIM 300
PDLSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIM
Sbjct: 241 PDLSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIM 300
Query: 301 LNLNKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILT 360
LNLNKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILT
Sbjct: 301 LNLNKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILT 360
Query: 361 SYPELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPE 420
SYPELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPE
Sbjct: 361 SYPELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPE 420
Query: 421 EPKILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIA 480
EPKILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIA
Sbjct: 421 EPKILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIA 480
Query: 481 TARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQ 540
TARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQ
Sbjct: 481 TARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQ 540
Query: 541 KRQSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVV 600
KRQSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVV
Sbjct: 541 KRQSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVV 600
Query: 601 DAEKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDP 660
DAEKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDP
Sbjct: 601 DAEKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDP 660
Query: 661 VLCKLLPDNETV 672
VLCKLLPDNETV
Sbjct: 661 VLCKLLPDNETV 672
>gi|29347716|ref|NP_811219.1| putative mobilization protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|29339617|gb|AAO77413.1| putative mobilization protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 669
Score = 1122 bits (2901), Expect = 0.0, Method: Composition-based stats.
Identities = 521/667 (78%), Positives = 595/667 (89%)
Query: 4 QEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLFH 63
QEDDLR LAK+MDF+RA+S++ VV+N+YWFCY +IR W VNIGVVD+ILLNF RT GLF
Sbjct: 3 QEDDLRGLAKVMDFMRALSVLFVVVNIYWFCYPSIREWNVNIGVVDRILLNFQRTTGLFG 62
Query: 64 SILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPLEAV 123
SIL+TKLFSV LALSCLGTKGVK EKI W IWTA + G VLFF NWWLL LP+PL A
Sbjct: 63 SILWTKLFSVTFLALSCLGTKGVKEEKIKWVHIWTALSAGVVLFFFNWWLLCLPVPLLAR 122
Query: 124 TGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNLPTR 183
T Y+ T+ GY+CLL G+W+SRLLK NLM+DVFNNENESFMQETRLIE+EYSVNLPTR
Sbjct: 123 TAFYIFTLAVGYLCLLAAGVWISRLLKQNLMDDVFNNENESFMQETRLIENEYSVNLPTR 182
Query: 184 FYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDL 243
FYY K+WN+GWINVVNPFRASIVLGTPGSGKS+AVVN++IKQQIEKG++ YIYDFK+PDL
Sbjct: 183 FYYGKKWNDGWINVVNPFRASIVLGTPGSGKSFAVVNSYIKQQIEKGYAAYIYDFKFPDL 242
Query: 244 STIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLNL 303
STIAYNHL+ H +GYKV PKFYVINFDDP RSHRCNP++P FM DI+DAYES+Y+IMLNL
Sbjct: 243 STIAYNHLIGHLEGYKVPPKFYVINFDDPSRSHRCNPLNPKFMTDISDAYESSYSIMLNL 302
Query: 304 NKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSYP 363
N++W KQGDFFVESP ILFA+IIW+L++Y++G++CTFPHA+EFLN+ YE IFPI++SYP
Sbjct: 303 NRSWAAKQGDFFVESPTILFAAIIWFLRVYKDGRYCTFPHAVEFLNKPYEQIFPIMSSYP 362
Query: 364 ELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEPK 423
ELENYLSPF+DAWL GAA+QLMGQIASAKIPLSRMISP LYWVMS EF+LDINNP+EPK
Sbjct: 363 ELENYLSPFLDAWLAGAADQLMGQIASAKIPLSRMISPALYWVMSADEFSLDINNPDEPK 422
Query: 424 ILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATAR 483
ILC+GNNPDRQ IYGAALGLYNSRIVK++NKKG LKSS+IIDELPTI+ KGLDNLIATAR
Sbjct: 423 ILCIGNNPDRQAIYGAALGLYNSRIVKIVNKKGRLKSSIIIDELPTIFIKGLDNLIATAR 482
Query: 484 SNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQKRQ 543
SNKVAV LGFQDFSQL+RDY DKEAKV++NTVGNIFSGQVVGETAKTLSERFGK+LQKR
Sbjct: 483 SNKVAVLLGFQDFSQLIRDYTDKEAKVIINTVGNIFSGQVVGETAKTLSERFGKILQKRH 542
Query: 544 SISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDAE 603
SISINRQDVSTSI+TQMD+LIPPSKISGLTQGMFVGSV+DNF ERIEQKIFHCEIVVDA+
Sbjct: 543 SISINRQDVSTSISTQMDSLIPPSKISGLTQGMFVGSVADNFGERIEQKIFHCEIVVDAK 602
Query: 604 KVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDPVLC 663
K+ EE AY+KIPVIT F D +G + MKE VQ NY RIKE+V++IV +ELERI DP L
Sbjct: 603 KIAEEEKAYQKIPVITGFVDGEGVNHMKEMVQENYNRIKEDVRRIVADELERIAADPNLR 662
Query: 664 KLLPDNE 670
LL N+
Sbjct: 663 HLLELNK 669
>gi|156862360|gb|EDO55791.1| hypothetical protein BACUNI_00633 [Bacteroides uniformis ATCC 8492]
Length = 671
Score = 1103 bits (2852), Expect = 0.0, Method: Composition-based stats.
Identities = 506/663 (76%), Positives = 594/663 (89%)
Query: 4 QEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLFH 63
QEDDLR LA++MDF+RA+SI+ V++N+YW+CY AI+ WG+NIGVVDKILLNF RTAGLF
Sbjct: 3 QEDDLRGLARVMDFMRALSILFVIINIYWYCYPAIKEWGINIGVVDKILLNFHRTAGLFT 62
Query: 64 SILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPLEAV 123
LYTKLF V+ LALSC+GTKGVK EKI W I +VGFVLFF NWWLL +P+
Sbjct: 63 WSLYTKLFCVVFLALSCIGTKGVKEEKIKWVHIGAVLSVGFVLFFFNWWLLDMPVSFVVR 122
Query: 124 TGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNLPTR 183
T Y+LT+ GY+CLL G+W+SRLLK+NL++DVFNNENESFMQETRL+E+EYSVNL TR
Sbjct: 123 TAFYILTLTVGYLCLLAAGIWISRLLKNNLLDDVFNNENESFMQETRLMENEYSVNLRTR 182
Query: 184 FYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDL 243
F+Y+K+WN+GWINVVN FRASIVLGTPGSGKS+AVVN++IKQQIEKGF+ +IYDFK+PDL
Sbjct: 183 FFYKKKWNDGWINVVNVFRASIVLGTPGSGKSFAVVNSYIKQQIEKGFAMFIYDFKFPDL 242
Query: 244 STIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLNL 303
+TIAYNHLL H DGYKVKP+FY+INFDDP RSHRCNP++ FM DI+DAYES+Y IMLNL
Sbjct: 243 TTIAYNHLLTHQDGYKVKPQFYIINFDDPSRSHRCNPLNARFMTDISDAYESSYNIMLNL 302
Query: 304 NKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSYP 363
N++W KQGDFFVESP ILFA+IIW+L+IY++G++CTFPHA+EFLN+ YE IFPI++SYP
Sbjct: 303 NRSWAAKQGDFFVESPTILFAAIIWFLRIYKDGRYCTFPHAVEFLNKPYEQIFPIMSSYP 362
Query: 364 ELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEPK 423
ELENYLSPF+DAWL GAA+QLMGQIASAKIPLSRMISP LYWVMS EFTLDINNP+ PK
Sbjct: 363 ELENYLSPFLDAWLAGAADQLMGQIASAKIPLSRMISPALYWVMSADEFTLDINNPDAPK 422
Query: 424 ILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATAR 483
+LC+GNNP+RQ IYGAALGLYNSRI+KL+NKKGMLKSS+IIDELPTI+ KGLDNLIATAR
Sbjct: 423 VLCIGNNPNRQAIYGAALGLYNSRIIKLVNKKGMLKSSIIIDELPTIFIKGLDNLIATAR 482
Query: 484 SNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQKRQ 543
SNKVAV LGFQDFSQL+RDY DKEAKV++NTVGN+FSGQVVGETAKTLSERFGK+LQKRQ
Sbjct: 483 SNKVAVLLGFQDFSQLIRDYTDKEAKVIINTVGNLFSGQVVGETAKTLSERFGKILQKRQ 542
Query: 544 SISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDAE 603
S++INR D STSI+TQMD++IPPSKISGLTQGMFVGSV+DNF+ERIEQKIFHCEIVVDA
Sbjct: 543 SMTINRNDKSTSISTQMDSMIPPSKISGLTQGMFVGSVADNFSERIEQKIFHCEIVVDAA 602
Query: 604 KVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDPVLC 663
K+ EE +Y+KIPVITNF D++G D M+E VQANY +IKE+V+QIV +ELERIKNDP LC
Sbjct: 603 KIAEEEKSYQKIPVITNFVDDNGVDHMQEMVQANYNQIKEDVRQIVADELERIKNDPALC 662
Query: 664 KLL 666
LL
Sbjct: 663 HLL 665
>gi|60680770|ref|YP_210914.1| putative transmembrane mobilisation protein [Bacteroides fragilis
NCTC 9343]
gi|60492204|emb|CAH06969.1| putative transmembrane mobilisation protein [Bacteroides fragilis
NCTC 9343]
Length = 666
Score = 1101 bits (2848), Expect = 0.0, Method: Composition-based stats.
Identities = 519/664 (78%), Positives = 595/664 (89%), Gaps = 2/664 (0%)
Query: 3 QQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLF 62
Q EDDLR LAK+MDF+RA+SI+ VV+N+YWFCY++ R WG+NIGVVDKILLNF RTAGLF
Sbjct: 2 QNEDDLRGLAKVMDFMRAISILFVVINIYWFCYQSFREWGINIGVVDKILLNFQRTAGLF 61
Query: 63 HSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPLEA 122
+ILYTKLFSV+ LALSCLGTKGVK EKITW RI+ +GF+LFFLNWWLL LPLP A
Sbjct: 62 SNILYTKLFSVVFLALSCLGTKGVKEEKITWNRIYVFLTIGFILFFLNWWLLFLPLP--A 119
Query: 123 VTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNLPT 182
T LY+ T+ GY+ LL G+W+SRLLK+NLM+DVFN ENESF QETRLIE+EYS+NLPT
Sbjct: 120 NTALYIFTMTAGYLSLLAAGVWISRLLKNNLMDDVFNTENESFAQETRLIENEYSINLPT 179
Query: 183 RFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPD 242
RFYY+K+WN+GWINVVNPFRAS+VLGTPGSGKSYA+VNN+IKQQIEKGF+ YIYD+K+PD
Sbjct: 180 RFYYKKKWNDGWINVVNPFRASMVLGTPGSGKSYAIVNNYIKQQIEKGFAVYIYDYKFPD 239
Query: 243 LSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLN 302
LS IAYNHL+++ DGYKVKPKFY+INFDDPR+SHRCNPI+P FM DI+DAYE++YTIMLN
Sbjct: 240 LSEIAYNHLISYLDGYKVKPKFYMINFDDPRKSHRCNPINPAFMTDISDAYEASYTIMLN 299
Query: 303 LNKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSY 362
LN++W+ KQGDFFVESPIIL ASIIW+LKIYQ GK+CTFPHAIEFLN++Y D F ILTSY
Sbjct: 300 LNRSWITKQGDFFVESPIILLASIIWFLKIYQGGKYCTFPHAIEFLNKKYADTFTILTSY 359
Query: 363 PELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEP 422
PELENYLSPFMDAW A +QL GQ+ASAKIPLSRMISP LYWVM+ +F+LDINNPEEP
Sbjct: 360 PELENYLSPFMDAWESNAQDQLQGQLASAKIPLSRMISPALYWVMTGDDFSLDINNPEEP 419
Query: 423 KILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATA 482
KIL VGNNPDRQNIY ALGLYNSRIVKLINKK LKSSVIIDELPTIYF+GLDNLIATA
Sbjct: 420 KILVVGNNPDRQNIYSCALGLYNSRIVKLINKKHQLKSSVIIDELPTIYFRGLDNLIATA 479
Query: 483 RSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQKR 542
RSNKVAVCLGFQDFSQL RDYGDKE+KV+ NTVGNIFSGQVV ETAKTLS+RFGKVLQKR
Sbjct: 480 RSNKVAVCLGFQDFSQLRRDYGDKESKVIENTVGNIFSGQVVSETAKTLSDRFGKVLQKR 539
Query: 543 QSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDA 602
QS++INR D STSI+TQMD+LIPPSKIS LTQGMFVG+VSDNF+ERIEQKIFH EI+VD
Sbjct: 540 QSMTINRNDKSTSISTQMDSLIPPSKISNLTQGMFVGAVSDNFDERIEQKIFHAEIMVDN 599
Query: 603 EKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDPVL 662
EKVKRE ++YKK+P I +F DEDGNDRM+E +QANY R+K+EV+QI+ +E+ERIKNDP L
Sbjct: 600 EKVKRETASYKKLPQIIDFRDEDGNDRMQEEIQANYNRVKQEVQQIITDEIERIKNDPNL 659
Query: 663 CKLL 666
LL
Sbjct: 660 QNLL 663
>gi|53712661|ref|YP_098653.1| putative mobilization protein [Bacteroides fragilis YCH46]
gi|52215526|dbj|BAD48119.1| putative mobilization protein [Bacteroides fragilis YCH46]
Length = 669
Score = 1095 bits (2831), Expect = 0.0, Method: Composition-based stats.
Identities = 509/668 (76%), Positives = 586/668 (87%)
Query: 3 QQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLF 62
QQEDDLR LA++MDF+RAVSI+ V +NVYWFCY ++ WGV V+DKIL NF RT GLF
Sbjct: 2 QQEDDLRGLARVMDFMRAVSILFVGINVYWFCYSTLKEWGVTFEVIDKILWNFQRTTGLF 61
Query: 63 HSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPLEA 122
S+L+TKLFSV+ LALSC+GTKGVK EKITW +I + A G VLFFLNWWLL LPLP A
Sbjct: 62 SSVLWTKLFSVVFLALSCIGTKGVKEEKITWAKIHCSLAAGVVLFFLNWWLLELPLPHTA 121
Query: 123 VTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNLPT 182
Y+ T+ GY+C+LM G WMSRLLK+NLM DVFN ENESF QETRLIE+EYSVNLPT
Sbjct: 122 DAVFYIATLSAGYICMLMAGTWMSRLLKNNLMYDVFNTENESFQQETRLIENEYSVNLPT 181
Query: 183 RFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPD 242
RFYY+K+WNNGWINVVNPFRAS+VLGTPGSGKSYAVVN++IKQQIEKGF+ Y YD+K+PD
Sbjct: 182 RFYYKKKWNNGWINVVNPFRASLVLGTPGSGKSYAVVNSYIKQQIEKGFALYCYDYKFPD 241
Query: 243 LSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLN 302
LS IAYNHLLNH DGYKVKPKFY+INFDDPR+SHRCNPI+ FM DI DAYE++YTIMLN
Sbjct: 242 LSEIAYNHLLNHLDGYKVKPKFYIINFDDPRKSHRCNPINASFMSDIADAYEASYTIMLN 301
Query: 303 LNKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSY 362
LN++W+ KQGDFFVESPIIL A+IIWYL+IYQ GK+CTFPHAIE LN++Y D+F IL SY
Sbjct: 302 LNRSWISKQGDFFVESPIILLAAIIWYLRIYQGGKYCTFPHAIELLNKKYADVFTILRSY 361
Query: 363 PELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEP 422
PELENYLSPF+DAW A EQL GQIASAKIPLSRMISP LYWVM+ +F+LDINNP+EP
Sbjct: 362 PELENYLSPFVDAWESDAQEQLQGQIASAKIPLSRMISPALYWVMTGDDFSLDINNPKEP 421
Query: 423 KILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATA 482
KIL VGNNPDRQNIY AALGLYNSRIVKLINKKG LKSSVIIDELPTIYF+GLDNLIATA
Sbjct: 422 KILVVGNNPDRQNIYSAALGLYNSRIVKLINKKGQLKSSVIIDELPTIYFRGLDNLIATA 481
Query: 483 RSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQKR 542
RSNKVAV LGFQD+SQL RDYGDKE++V+ NTVGN+FSGQVVGETAK LSERFGKVLQKR
Sbjct: 482 RSNKVAVLLGFQDYSQLTRDYGDKESRVIQNTVGNVFSGQVVGETAKILSERFGKVLQKR 541
Query: 543 QSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDA 602
QS++IN+++ STSI+TQMD+LIP SKIS LTQGMFVG+V+DNF+ERIEQKIFHCEIVVD
Sbjct: 542 QSMTINQREKSTSISTQMDSLIPASKISNLTQGMFVGAVADNFDERIEQKIFHCEIVVDN 601
Query: 603 EKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDPVL 662
EKVKRE + Y K+P I +FTD+DGNDRM+E +QANY RI++EV+QIV++E+ RIKNDP L
Sbjct: 602 EKVKRETARYVKLPQIIDFTDKDGNDRMQEEIQANYDRIRQEVRQIVEDEITRIKNDPEL 661
Query: 663 CKLLPDNE 670
C L+ + E
Sbjct: 662 CHLIKEEE 669
>gi|60681250|ref|YP_211394.1| putative transmembrane TraG/TraD family mobilization protein
[Bacteroides fragilis NCTC 9343]
gi|60492684|emb|CAH07457.1| putative transmembrane TraG/TraD family mobilization protein
[Bacteroides fragilis NCTC 9343]
Length = 668
Score = 1069 bits (2765), Expect = 0.0, Method: Composition-based stats.
Identities = 505/666 (75%), Positives = 577/666 (86%)
Query: 3 QQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLF 62
Q EDDLR LAK+M+F+RA+SI+ VV+N+YWFCY+++R WG++IGVVD+ILL F RTAGLF
Sbjct: 2 QNEDDLRGLAKVMEFMRAISILFVVINIYWFCYQSVREWGIDIGVVDRILLGFQRTAGLF 61
Query: 63 HSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPLEA 122
+IL+TKLF+VL LALSCLGTKGVK +KITW RI G +LFF N WLL LPLP A
Sbjct: 62 SNILWTKLFAVLFLALSCLGTKGVKEQKITWRRIILCGVSGLLLFFGNGWLLTLPLPFPA 121
Query: 123 VTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNLPT 182
T LY+ T+ GY+CLLM GLWMSRLLK +L+EDVFN ENESFMQET L E+EYSVNL T
Sbjct: 122 DTVLYIATLTAGYICLLMAGLWMSRLLKTDLLEDVFNVENESFMQETELKENEYSVNLRT 181
Query: 183 RFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPD 242
RF++R R +GWIN+VNPFRA++VLGTPGSGKSYA++N +IKQ IEKG+S ++YDFKYPD
Sbjct: 182 RFWFRGRAYDGWINLVNPFRATMVLGTPGSGKSYAIINQYIKQTIEKGYSLFLYDFKYPD 241
Query: 243 LSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLN 302
LS IAYNHLL H DGYKVKPKFYVINFD+PR SHRCNPIHPDFM DI+DAYESAYTIMLN
Sbjct: 242 LSEIAYNHLLAHLDGYKVKPKFYVINFDNPRESHRCNPIHPDFMTDISDAYESAYTIMLN 301
Query: 303 LNKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSY 362
LN+TW+ KQGDFFVESPIIL ASIIWYLKIY+NGK+CTFPHAIEFLNR+Y DIFPILTSY
Sbjct: 302 LNRTWISKQGDFFVESPIILLASIIWYLKIYKNGKYCTFPHAIEFLNRKYADIFPILTSY 361
Query: 363 PELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEP 422
PELENYLSPFMDAW A EQL GQIASAKIPLSRMISP LYWVM+ +FTLDINNPEEP
Sbjct: 362 PELENYLSPFMDAWESSAVEQLQGQIASAKIPLSRMISPALYWVMTADDFTLDINNPEEP 421
Query: 423 KILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATA 482
K+L VGNNPDRQ IYGAALGLYNSRIVKLINKK LKS+VIIDELPTIY +GLDNLIATA
Sbjct: 422 KVLVVGNNPDRQGIYGAALGLYNSRIVKLINKKKRLKSAVIIDELPTIYMRGLDNLIATA 481
Query: 483 RSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQKR 542
RSNKVAV LGFQDFSQL RDYGDKE+ V+ NTVGN+F+GQVV ETAKTLSERFGKVLQKR
Sbjct: 482 RSNKVAVMLGFQDFSQLKRDYGDKESAVICNTVGNVFAGQVVAETAKTLSERFGKVLQKR 541
Query: 543 QSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDA 602
Q+++INR + S SINTQMD+LIP SKIS LTQGMFVG+V+DNF+ERIEQKIFH EIVVD
Sbjct: 542 QNMTINRNETSVSINTQMDSLIPASKISNLTQGMFVGAVADNFDERIEQKIFHAEIVVDN 601
Query: 603 EKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDPVL 662
E+V+RE + Y KIP I +FTD+DGND M++ + ANY RIK EV+QIV +E+ RIK DP L
Sbjct: 602 EQVRRETARYVKIPQIIDFTDKDGNDTMQQQIDANYYRIKSEVRQIVADEIGRIKADPEL 661
Query: 663 CKLLPD 668
L+ D
Sbjct: 662 SHLIKD 667
>gi|29345512|ref|NP_809015.1| hypothetical protein BT_0102 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29337404|gb|AAO75209.1| putative transmembrane mobilisation protein [Bacteroides
thetaiotaomicron VPI-5482]
Length = 669
Score = 1065 bits (2753), Expect = 0.0, Method: Composition-based stats.
Identities = 514/668 (76%), Positives = 588/668 (88%)
Query: 3 QQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLF 62
Q EDDLR LAK+MDF+RA+SI+ VV+N+YWFCY++ R WG+NIGVVDKILLNF RTAGLF
Sbjct: 2 QNEDDLRGLAKVMDFMRAISILFVVINIYWFCYQSFRQWGINIGVVDKILLNFQRTAGLF 61
Query: 63 HSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPLEA 122
+ILYTKLFSV+ LALSCLGTKGVK EKITW +I+ +GF+LFFLNWWLL LPLPL A
Sbjct: 62 SNILYTKLFSVVFLALSCLGTKGVKEEKITWNKIYVFLTIGFILFFLNWWLLVLPLPLAA 121
Query: 123 VTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNLPT 182
T LY+ T+ GY+ LL G+W+SRLLK+NL++DVFN ENESF QETRLIE+EYSVNL +
Sbjct: 122 NTALYIFTMTAGYLSLLAAGVWISRLLKNNLLDDVFNLENESFAQETRLIENEYSVNLRS 181
Query: 183 RFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPD 242
RFYY+K+WN+GWINVV FRA IV+G PGSGKS+ VVN FIKQQIEKGF+ Y+YD+K+PD
Sbjct: 182 RFYYKKKWNDGWINVVAIFRACIVVGNPGSGKSFCVVNQFIKQQIEKGFAMYLYDYKFPD 241
Query: 243 LSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLN 302
LS IAYNHLLNH DGYKVKPKFY+INFDDPR+SHRCNPI+P FM DI+DAYE++YTIMLN
Sbjct: 242 LSEIAYNHLLNHSDGYKVKPKFYIINFDDPRKSHRCNPINPAFMTDISDAYEASYTIMLN 301
Query: 303 LNKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSY 362
LN++W+ KQGDFFVESPIIL ASIIW+LKIYQ GK+CTFPHAIEFLN++Y D F ILTSY
Sbjct: 302 LNRSWITKQGDFFVESPIILLASIIWFLKIYQGGKYCTFPHAIEFLNKKYADTFTILTSY 361
Query: 363 PELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEP 422
PELENYLSPFMDAW A +QL GQ+ASAKIPLSRMISP LYWVM+ +F+LDINNPEEP
Sbjct: 362 PELENYLSPFMDAWESNAQDQLQGQLASAKIPLSRMISPALYWVMTGDDFSLDINNPEEP 421
Query: 423 KILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATA 482
KIL VGNNPDRQNIY ALGLYNSRIVKLINKK LK SVIIDELPTIYF+GLDNLIATA
Sbjct: 422 KILVVGNNPDRQNIYSCALGLYNSRIVKLINKKHQLKCSVIIDELPTIYFRGLDNLIATA 481
Query: 483 RSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQKR 542
RSNKVAVCLGFQDFSQL RDYGDKE+KV+ NTVGNIFSGQVV ETAKTLS+RFGKVLQKR
Sbjct: 482 RSNKVAVCLGFQDFSQLRRDYGDKESKVIENTVGNIFSGQVVSETAKTLSDRFGKVLQKR 541
Query: 543 QSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDA 602
QS++INR D STSI+TQMD+LIPPSKIS LTQGMFVG+VSDNF+ERIEQKIFH EIVVD
Sbjct: 542 QSMTINRNDKSTSISTQMDSLIPPSKISNLTQGMFVGAVSDNFDERIEQKIFHAEIVVDN 601
Query: 603 EKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDPVL 662
E+VKRE + YKK+P I +F DEDGNDRM+E +QANY R+K+EV+QIV +E+ERIKNDP L
Sbjct: 602 EQVKRETANYKKLPQIIDFRDEDGNDRMQEEIQANYNRVKQEVQQIVTDEMERIKNDPNL 661
Query: 663 CKLLPDNE 670
L+ E
Sbjct: 662 QHLIKTEE 669
>gi|34541157|ref|NP_905636.1| TraG family protein [Porphyromonas gingivalis W83]
gi|34397473|gb|AAQ66535.1| TraG family protein [Porphyromonas gingivalis W83]
Length = 669
Score = 1057 bits (2734), Expect = 0.0, Method: Composition-based stats.
Identities = 495/667 (74%), Positives = 569/667 (85%)
Query: 3 QQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLF 62
Q EDDLR LAK MDF+RA++I+ V+N YWFCYEA+ W + I V D IL+NF RT GLF
Sbjct: 2 QNEDDLRGLAKTMDFMRAIAILFTVINGYWFCYEALHEWKITISVADTILMNFHRTTGLF 61
Query: 63 HSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPLEA 122
SIL+TKLF+V+ L LSCLGTKGVK E+IT RI + G L+ LN W+L LP+ ++
Sbjct: 62 SSILWTKLFAVVFLGLSCLGTKGVKEERITRRRIGVVLSAGAALYLLNGWILSLPVGIDL 121
Query: 123 VTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNLPT 182
Y+LT+ G++CLLM G W+SRLLKHNLM+DVFN ENESFMQETRL+ +EYSVNLPT
Sbjct: 122 RAVCYLLTLSAGFICLLMAGSWISRLLKHNLMDDVFNVENESFMQETRLMTNEYSVNLPT 181
Query: 183 RFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPD 242
RFYYRK+W +GWINVVNPFRAS+VLGTPGSGKSYA+VNN+IKQQIEKGF+ YIYD+K+PD
Sbjct: 182 RFYYRKKWRDGWINVVNPFRASMVLGTPGSGKSYAIVNNYIKQQIEKGFAMYIYDYKFPD 241
Query: 243 LSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLN 302
LS IAYNHLL H Y+V+PKFYVINFDDPRRSHRCNPI+PDFM DI+DAYESAYTIMLN
Sbjct: 242 LSEIAYNHLLRHRKAYEVQPKFYVINFDDPRRSHRCNPINPDFMSDISDAYESAYTIMLN 301
Query: 303 LNKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSY 362
LN+TW+QKQGDFFVESPIIL A+IIW+LKIY+NG++CTFPHAIEFLNR Y IFPILTSY
Sbjct: 302 LNRTWIQKQGDFFVESPIILLAAIIWFLKIYENGRYCTFPHAIEFLNRPYAQIFPILTSY 361
Query: 363 PELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEP 422
EL NYLSPFMDAW GGA +QL GQIASAKIPLSRMISP LYWVM+ +F+LDINNP+EP
Sbjct: 362 DELANYLSPFMDAWEGGAQDQLQGQIASAKIPLSRMISPALYWVMTGDDFSLDINNPKEP 421
Query: 423 KILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATA 482
KIL VGNNPDRQNIY AALGLYNSRIVKLINKK LKSSVIIDELPTIYF+GLDNLIATA
Sbjct: 422 KILVVGNNPDRQNIYSAALGLYNSRIVKLINKKKQLKSSVIIDELPTIYFRGLDNLIATA 481
Query: 483 RSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQKR 542
RSNKVAVCLGFQDFSQL RDYGDKE+KV+ NTVGN+FSGQVVGETAKTLSERFGKVLQ+R
Sbjct: 482 RSNKVAVCLGFQDFSQLTRDYGDKESKVIQNTVGNVFSGQVVGETAKTLSERFGKVLQQR 541
Query: 543 QSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDA 602
QS++INR D STSI+TQMD+LIP SKIS LTQGMFVG+VSDNF+ERIEQKIFH EIVVD+
Sbjct: 542 QSMTINRNDKSTSISTQMDSLIPASKISNLTQGMFVGAVSDNFDERIEQKIFHAEIVVDS 601
Query: 603 EKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDPVL 662
K+ E +YK IPVI FTDE G D +K ++ ANY++IK+E+ +V E+ERI+ DP
Sbjct: 602 AKISAETKSYKPIPVIAAFTDESGQDSLKASIDANYKQIKQEILALVDVEIERIEKDPEQ 661
Query: 663 CKLLPDN 669
LL N
Sbjct: 662 SGLLRKN 668
>gi|29348024|ref|NP_811527.1| putative mobilization protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|29339926|gb|AAO77721.1| putative mobilization protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 681
Score = 1050 bits (2716), Expect = 0.0, Method: Composition-based stats.
Identities = 496/664 (74%), Positives = 576/664 (86%)
Query: 3 QQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLF 62
QQEDDLRALAKIM+F RAVSI L+V++VY +CY +I W +N+ V+DKI++NF+ T G+F
Sbjct: 2 QQEDDLRALAKIMEFGRAVSIFLLVVHVYVYCYPSIASWNLNLEVIDKIIMNFNNTTGIF 61
Query: 63 HSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPLEA 122
+ +L++KL ++LLLA+SCLGTKGVKGEKIT +I A G +LFF NWW+L LP+P A
Sbjct: 62 NCVLWSKLAAILLLAVSCLGTKGVKGEKITRHKIHAALFAGCILFFPNWWILDLPMPHAA 121
Query: 123 VTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNLPT 182
VT LYV T+ GY+CLLM GLWMSRL +HNLMEDVFN ENESF QETRL+E+EYSVNLPT
Sbjct: 122 VTALYVFTLVPGYLCLLMAGLWMSRLYRHNLMEDVFNLENESFQQETRLMENEYSVNLPT 181
Query: 183 RFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPD 242
+F Y+ R N+GWINVVNPFRA+IVLGTPGSGKSYAVVNN+I+Q I KG+S YIYD+K+ D
Sbjct: 182 KFQYQGRLNDGWINVVNPFRATIVLGTPGSGKSYAVVNNYIRQMISKGYSCYIYDYKFDD 241
Query: 243 LSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLN 302
LS IAYN LLN+ D YKVKPKFYVINFDDPRRSHRCNPI+P+FM DI+DAYE++YTIMLN
Sbjct: 242 LSIIAYNTLLNNMDKYKVKPKFYVINFDDPRRSHRCNPINPEFMTDISDAYEASYTIMLN 301
Query: 303 LNKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSY 362
LNKTW++KQGDFFVESPIIL A+IIWYLKIY+NG +CTFPHA+E LN+ Y D+F ILTSY
Sbjct: 302 LNKTWIEKQGDFFVESPIILLAAIIWYLKIYKNGIYCTFPHAVELLNKPYSDLFTILTSY 361
Query: 363 PELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEP 422
PELENYLSPFMDAW GA +QL GQIASAKIPL+RMISPQLYWVM+ ++F+LDINNP EP
Sbjct: 362 PELENYLSPFMDAWKSGAQDQLQGQIASAKIPLTRMISPQLYWVMTGNDFSLDINNPNEP 421
Query: 423 KILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATA 482
K+LCVGNNPDRQNIY AALGLYNSRIVKLINKKG LKS+VIIDELPTIYF+GLDNLIATA
Sbjct: 422 KLLCVGNNPDRQNIYSAALGLYNSRIVKLINKKGQLKSTVIIDELPTIYFRGLDNLIATA 481
Query: 483 RSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQKR 542
RSNKVAVCLG QDFSQL RDYG+KE+KVV NTVGNIFSGQVVGETA+TLSERFGKVLQKR
Sbjct: 482 RSNKVAVCLGLQDFSQLNRDYGEKESKVVQNTVGNIFSGQVVGETARTLSERFGKVLQKR 541
Query: 543 QSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDA 602
QS+SINRQDVSTSINTQ+D+LIP SKI+ L+QG FVG+VSDNF E+IEQKIFH EI+VD
Sbjct: 542 QSVSINRQDVSTSINTQLDSLIPASKIANLSQGTFVGAVSDNFGEKIEQKIFHAEIIVDH 601
Query: 603 EKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDPVL 662
EKV EE YKKIPVI F D +GND M + + NY RIK + + I+ E+ERIKNDP L
Sbjct: 602 EKVSGEEKNYKKIPVINEFRDREGNDIMTQQIGRNYDRIKADAQAIINMEMERIKNDPEL 661
Query: 663 CKLL 666
C+ L
Sbjct: 662 CRRL 665
>gi|156112113|gb|EDO13858.1| hypothetical protein BACOVA_00483 [Bacteroides ovatus ATCC 8483]
Length = 681
Score = 1041 bits (2693), Expect = 0.0, Method: Composition-based stats.
Identities = 493/664 (74%), Positives = 574/664 (86%)
Query: 3 QQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLF 62
QQEDDLRALAKIM+F RAVSI L+V++VY +CY +I W +N+ V+DKI++NF+ T G+F
Sbjct: 2 QQEDDLRALAKIMEFGRAVSIFLLVVHVYVYCYPSITSWNLNLEVIDKIIMNFNNTTGIF 61
Query: 63 HSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPLEA 122
+ +L++KL LLLA+SCLGTKGVKGEKIT +I+ A G +LFFLNWW+L L LP A
Sbjct: 62 NCVLWSKLAVTLLLAVSCLGTKGVKGEKITRHKIYAALFAGCILFFLNWWILDLSLPHTA 121
Query: 123 VTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNLPT 182
VT LYV T+ +GY+CLLM GLWMSRL +HNLMEDVFN ENESF QETRL+E+EYSVNLPT
Sbjct: 122 VTTLYVFTLVSGYLCLLMAGLWMSRLYRHNLMEDVFNLENESFQQETRLMENEYSVNLPT 181
Query: 183 RFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPD 242
+F Y+ R N+GWINVVNPFRA+IVLGTPGSGKSYAVVNN+I+Q I KG+S YIYD+K+ D
Sbjct: 182 KFQYQGRLNDGWINVVNPFRATIVLGTPGSGKSYAVVNNYIRQMISKGYSCYIYDYKFDD 241
Query: 243 LSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLN 302
LS IAYN LLN+ D YKVKPKFYVINFD+PR+SHRCNPI+P+FM DI+DAYE++YTIMLN
Sbjct: 242 LSVIAYNTLLNNMDKYKVKPKFYVINFDNPRKSHRCNPINPEFMTDISDAYEASYTIMLN 301
Query: 303 LNKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSY 362
LNKTW++KQGDFFVESPIIL A+IIWYLKIY+NG +CTFPHA+E LN+ Y D+F ILTSY
Sbjct: 302 LNKTWIEKQGDFFVESPIILLAAIIWYLKIYKNGIYCTFPHAVELLNKPYSDLFTILTSY 361
Query: 363 PELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEP 422
PELENYLSPFMDAW GA +QL GQIASAKIPL+RMISPQLYW M+ ++F+LDINNP EP
Sbjct: 362 PELENYLSPFMDAWKSGAQDQLQGQIASAKIPLTRMISPQLYWAMTGNDFSLDINNPNEP 421
Query: 423 KILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATA 482
K+LCVGNNPDRQNIY AALGLYNSRIVKLINKKG LKS+VIIDELPTIYF+GLDNLIATA
Sbjct: 422 KLLCVGNNPDRQNIYSAALGLYNSRIVKLINKKGQLKSTVIIDELPTIYFRGLDNLIATA 481
Query: 483 RSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQKR 542
RSNKVAVCLGFQDFSQL RDYG+KE+KVV NTVGNIFSGQVVGETA+TLSERFGKVLQKR
Sbjct: 482 RSNKVAVCLGFQDFSQLNRDYGEKESKVVQNTVGNIFSGQVVGETARTLSERFGKVLQKR 541
Query: 543 QSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDA 602
QS+SINRQDVSTSINTQ+D+LIP SKI+ L+QG FVG+VSDNF E+I+QKIFH EI+VD
Sbjct: 542 QSVSINRQDVSTSINTQLDSLIPASKIANLSQGTFVGAVSDNFGEKIDQKIFHAEIIVDH 601
Query: 603 EKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDPVL 662
KV EE AYK IPVI F D +GND M + + NY RIK + + I+ E+ERIK DP L
Sbjct: 602 AKVSAEEKAYKPIPVINEFRDREGNDIMMQQIGRNYDRIKADAQAIINMEMERIKKDPEL 661
Query: 663 CKLL 666
CK L
Sbjct: 662 CKRL 665
>gi|146300768|ref|YP_001195359.1| hypothetical protein Fjoh_3019 [Flavobacterium johnsoniae UW101]
gi|146155186|gb|ABQ06040.1| hypothetical protein Fjoh_3019 [Flavobacterium johnsoniae UW101]
Length = 694
Score = 1025 bits (2651), Expect = 0.0, Method: Composition-based stats.
Identities = 484/664 (72%), Positives = 568/664 (85%), Gaps = 6/664 (0%)
Query: 3 QQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLF 62
Q EDDLR LAKIM F+RAVSI++++M+ YW+CY G + +D IL FDRTAGLF
Sbjct: 28 QGEDDLRGLAKIMAFMRAVSILVLLMHFYWYCYGFFNARGWTLETIDTILRGFDRTAGLF 87
Query: 63 HSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPLEA 122
++LY+KLF+ LLL LSCLGTKGVK EKITW +I+ A+GF+ FFLN +L E
Sbjct: 88 SNVLYSKLFAQLLLILSCLGTKGVKNEKITWTKIYPVLALGFIFFFLNGFLR------EV 141
Query: 123 VTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNLPT 182
LY+ + G GY L++ G+W+SR+L+ +LMEDVFNNENESF QETRL+E+EYSVNLPT
Sbjct: 142 SYLLYMFSSGIGYTALMVAGIWISRILRTSLMEDVFNNENESFQQETRLLENEYSVNLPT 201
Query: 183 RFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPD 242
FYY+ +WN+GWIN+VNPFRA+IVLGTPGSGKSYA++NN+IKQQIEKGF+ YIYDFK+ D
Sbjct: 202 SFYYKNKWNSGWINIVNPFRATIVLGTPGSGKSYAIINNYIKQQIEKGFAMYIYDFKFDD 261
Query: 243 LSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLN 302
LSTIAYNHLL H Y V PKFY+INFDDPR+SHRCNP++P FM DI+DAYE+AYTIMLN
Sbjct: 262 LSTIAYNHLLQHHHKYPVSPKFYIINFDDPRKSHRCNPLNPAFMTDISDAYEAAYTIMLN 321
Query: 303 LNKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSY 362
LN++W+QKQGDFFVESPIIL A+IIW+LKIYQNG++CTFPHAIE LN++Y D+F ILTSY
Sbjct: 322 LNRSWIQKQGDFFVESPIILLAAIIWFLKIYQNGRYCTFPHAIELLNKKYADVFTILTSY 381
Query: 363 PELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEP 422
PELENYLSPFMDAW GGA +QL GQIASAKIPLSRMISP LYWVM+ +F+LDINNPEEP
Sbjct: 382 PELENYLSPFMDAWKGGAQDQLQGQIASAKIPLSRMISPSLYWVMTGDDFSLDINNPEEP 441
Query: 423 KILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATA 482
KILCVGNNPDRQNIY AALGLYNSRIVKLINKKG LKSSVIIDELPTIYF+GLDNLIATA
Sbjct: 442 KILCVGNNPDRQNIYSAALGLYNSRIVKLINKKGQLKSSVIIDELPTIYFRGLDNLIATA 501
Query: 483 RSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQKR 542
RSNKVAVCLGFQDFSQL RDYGDKE+KV+ NTVGNIFSGQVVGETAK+LSERFGKVLQKR
Sbjct: 502 RSNKVAVCLGFQDFSQLNRDYGDKESKVIQNTVGNIFSGQVVGETAKSLSERFGKVLQKR 561
Query: 543 QSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDA 602
QSISINR D STSI+TQ+D+LIP SKIS LTQG+FVG+VSDNF++RIEQKIFH EIVVD
Sbjct: 562 QSISINRTDTSTSISTQLDSLIPASKISTLTQGIFVGAVSDNFDQRIEQKIFHAEIVVDT 621
Query: 603 EKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDPVL 662
++V REE Y+ IP I FTD +G D MK +QANYR+IK+ V +I+++EL+RI +DP L
Sbjct: 622 QQVAREEKDYQPIPEIMPFTDAEGRDNMKLEIQANYRQIKKNVVRIIEDELDRIAHDPDL 681
Query: 663 CKLL 666
L+
Sbjct: 682 QHLV 685
>gi|150003263|ref|YP_001298007.1| putative mobilization protein [Bacteroides vulgatus ATCC 8482]
gi|150004120|ref|YP_001298864.1| putative mobilization protein [Bacteroides vulgatus ATCC 8482]
gi|154491620|ref|ZP_02031246.1| hypothetical protein PARMER_01231 [Parabacteroides merdae ATCC
43184]
gi|149931687|gb|ABR38385.1| putative mobilization protein [Bacteroides vulgatus ATCC 8482]
gi|149932544|gb|ABR39242.1| putative mobilization protein [Bacteroides vulgatus ATCC 8482]
gi|154088421|gb|EDN87466.1| hypothetical protein PARMER_01231 [Parabacteroides merdae ATCC
43184]
gi|156860495|gb|EDO53926.1| hypothetical protein BACUNI_02547 [Bacteroides uniformis ATCC 8492]
Length = 678
Score = 1024 bits (2648), Expect = 0.0, Method: Composition-based stats.
Identities = 486/664 (73%), Positives = 575/664 (86%)
Query: 3 QQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLF 62
QQEDDLRALAKIM+F RAVSI L+V++VY +CY +I W +N+ V+D+IL+NF+ T G+F
Sbjct: 2 QQEDDLRALAKIMEFGRAVSIFLLVVHVYVYCYPSITAWHLNLEVIDRILVNFNNTTGIF 61
Query: 63 HSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPLEA 122
+ IL++KL +VLLLA+SCLGT GVKGEKITW +I+ G LFFLNWWLL LPLP A
Sbjct: 62 NCILWSKLLAVLLLAVSCLGTHGVKGEKITWPKIYAVLVAGCALFFLNWWLLKLPLPHMA 121
Query: 123 VTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNLPT 182
T Y+ T+ GY+ LLM GLWMSRL +HNLMEDVFN ENESFMQETRL+E+EYSVNLPT
Sbjct: 122 NTAFYIFTLTAGYLALLMSGLWMSRLYRHNLMEDVFNMENESFMQETRLMENEYSVNLPT 181
Query: 183 RFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPD 242
RFYY+KRWNNG++N+VN FRA +V+GTPGSGKSYA+VN++I+Q I KGF+ YIYD+K+ D
Sbjct: 182 RFYYKKRWNNGFVNIVNIFRACMVIGTPGSGKSYAIVNSYIRQLIAKGFAIYIYDYKFDD 241
Query: 243 LSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLN 302
LSTIAYN LL + D Y+VKP+FYVINFDDPRRSHRCNPI+P+FM DI+DAYE++YTIMLN
Sbjct: 242 LSTIAYNSLLKNMDKYEVKPRFYVINFDDPRRSHRCNPINPEFMTDISDAYEASYTIMLN 301
Query: 303 LNKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSY 362
LN+TW++KQGDFFVESPIIL A+IIWYLKIY+NG +CTFPHA+E LN+ Y D+F ILTSY
Sbjct: 302 LNRTWIEKQGDFFVESPIILLAAIIWYLKIYKNGIYCTFPHAVELLNKPYSDLFTILTSY 361
Query: 363 PELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEP 422
PELENYLSPFMDAW G A +QL GQIASAKIPL+RMISPQLYWVM+ ++F+LDINNP+EP
Sbjct: 362 PELENYLSPFMDAWKGNAQDQLQGQIASAKIPLTRMISPQLYWVMTGNDFSLDINNPKEP 421
Query: 423 KILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATA 482
K+LCVGNNPDRQNIY AALGLYNSRIVKLINKK LK +VIIDELPTIYF+GLDNLIATA
Sbjct: 422 KLLCVGNNPDRQNIYSAALGLYNSRIVKLINKKKQLKCAVIIDELPTIYFRGLDNLIATA 481
Query: 483 RSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQKR 542
RSNKV V LGFQDFSQL RDYG+KE+KV+ NTVGNIFSGQVVGETAKTLSERFGKVLQ+R
Sbjct: 482 RSNKVGVLLGFQDFSQLTRDYGEKESKVIQNTVGNIFSGQVVGETAKTLSERFGKVLQQR 541
Query: 543 QSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDA 602
QS+SINRQDVSTSINTQ+D+LIP SKI+ L+QG FVG+V+DNF+ERIEQKIFH EIVVD
Sbjct: 542 QSVSINRQDVSTSINTQLDSLIPASKIANLSQGTFVGAVADNFDERIEQKIFHAEIVVDH 601
Query: 603 EKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDPVL 662
K+ EE AY+KIPVI +F D +GND M + +Q NY +IK + + I+ EE+ RIKNDP L
Sbjct: 602 TKISAEEKAYQKIPVINDFKDRNGNDIMMQQIQRNYDQIKADAQAIINEEMRRIKNDPEL 661
Query: 663 CKLL 666
K L
Sbjct: 662 RKRL 665
>gi|29350166|ref|NP_813669.1| putative mobilization protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|29342078|gb|AAO79863.1| putative mobilization protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 511
Score = 813 bits (2100), Expect = 0.0, Method: Composition-based stats.
Identities = 378/505 (74%), Positives = 452/505 (89%)
Query: 166 MQETRLIESEYSVNLPTRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQ 225
MQETRL+E+EYS+NLPTRF+YRK+ GWINVVNPFRAS++LGTPGSGKSYAVVNN+IKQ
Sbjct: 1 MQETRLMENEYSINLPTRFWYRKKEWKGWINVVNPFRASMILGTPGSGKSYAVVNNYIKQ 60
Query: 226 QIEKGFSQYIYDFKYPDLSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDF 285
IEK ++ YIYDFK+ DLS IAYNHL+ + YK+ PKFYVINFD+PR+SHRCNP+ P+
Sbjct: 61 AIEKSYALYIYDFKFDDLSVIAYNHLIKYRHRYKIPPKFYVINFDNPRKSHRCNPLAPEL 120
Query: 286 MEDITDAYESAYTIMLNLNKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAI 345
M DI+DAYES+YTIMLNLNK+WVQKQGDFFVESPI+LF +IIW+LKIY+ GK+CTFPHAI
Sbjct: 121 MTDISDAYESSYTIMLNLNKSWVQKQGDFFVESPIVLFTAIIWFLKIYEGGKYCTFPHAI 180
Query: 346 EFLNRRYEDIFPILTSYPELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYW 405
E LN+RYED+F ILTSYP+LENYLSPF+DAW GGA+EQL GQIASAKIPLSR+ISPQLYW
Sbjct: 181 ELLNKRYEDVFTILTSYPDLENYLSPFIDAWKGGASEQLQGQIASAKIPLSRLISPQLYW 240
Query: 406 VMSDSEFTLDINNPEEPKILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIID 465
VMS S+FTLDINNP+EPK+LCVGNNPDR +IYGAALGLYNSRIVKLINKK LKS VIID
Sbjct: 241 VMSGSDFTLDINNPKEPKVLCVGNNPDRISIYGAALGLYNSRIVKLINKKKQLKSCVIID 300
Query: 466 ELPTIYFKGLDNLIATARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVG 525
ELPTI+FKGLDNLIATARSNKVAV LGFQDFSQL RDYGDKEA V+M+TVGN+FSGQVVG
Sbjct: 301 ELPTIFFKGLDNLIATARSNKVAVVLGFQDFSQLKRDYGDKEAAVIMSTVGNVFSGQVVG 360
Query: 526 ETAKTLSERFGKVLQKRQSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNF 585
ETAKTLSERFGK+LQKR+S+SINR D STSI+TQ+D+LIP SKIS L+QGMFVG+V+DNF
Sbjct: 361 ETAKTLSERFGKILQKRESMSINRNDTSTSISTQLDSLIPASKISTLSQGMFVGAVTDNF 420
Query: 586 NERIEQKIFHCEIVVDAEKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEV 645
E I+QK+FH +IVVD + V++E ++Y+ IP I++F DE+GND M++ +QANY++IK+++
Sbjct: 421 GETIDQKVFHAQIVVDNDAVQKETTSYQPIPEISSFLDENGNDTMEQQIQANYQQIKQDI 480
Query: 646 KQIVQEELERIKNDPVLCKLLPDNE 670
++V+ EL RI+NDP L LL +E
Sbjct: 481 VELVENELIRIENDPELKHLLGGDE 505
>gi|150004655|ref|YP_001299399.1| putative mobilization protein [Bacteroides vulgatus ATCC 8482]
gi|149933079|gb|ABR39777.1| putative mobilization protein [Bacteroides vulgatus ATCC 8482]
Length = 505
Score = 808 bits (2086), Expect = 0.0, Method: Composition-based stats.
Identities = 383/505 (75%), Positives = 451/505 (89%), Gaps = 1/505 (0%)
Query: 166 MQETRLIESEYSVNLPTRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQ 225
MQETRL+E+EYSVNLPT+F+YR + NG+IN+VN FRA+++LGTPGSGKSYA+VN FIKQ
Sbjct: 1 MQETRLMENEYSVNLPTKFWYRGKTYNGFINLVNIFRATMILGTPGSGKSYAIVNQFIKQ 60
Query: 226 QIEKGFSQYIYDFKYPDLSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDF 285
IEK ++ YIYDFK+ DLS IAYNHLL + YKV PKFYVINFD+PR+SHRCNP+ P+
Sbjct: 61 TIEKSYALYIYDFKFDDLSVIAYNHLLKYRYRYKVPPKFYVINFDNPRKSHRCNPLAPEL 120
Query: 286 MEDITDAYESAYTIMLNLNKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAI 345
M DI+DAYES+YTIMLNLNK+WVQKQGDFFVESPI+LF +IIW+LKIY+ GKFCTFPHAI
Sbjct: 121 MTDISDAYESSYTIMLNLNKSWVQKQGDFFVESPIVLFTAIIWFLKIYEGGKFCTFPHAI 180
Query: 346 EFLNRRYEDIFPILTSYPELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYW 405
E LN+RYED+F ILTSYP+LENYLSPF+DAW GGA+EQL GQIASAKIPLSR+ISPQLYW
Sbjct: 181 ELLNKRYEDVFTILTSYPDLENYLSPFIDAWKGGASEQLQGQIASAKIPLSRLISPQLYW 240
Query: 406 VMSDSEFTLDINNPEEPKILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIID 465
VMS S+FTLDINNP+EPK+LCVGNNPDR +IYGAALGLYNSRIVKLINKK LKS VIID
Sbjct: 241 VMSGSDFTLDINNPKEPKVLCVGNNPDRISIYGAALGLYNSRIVKLINKKKQLKSCVIID 300
Query: 466 ELPTIYFKGLDNLIATARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVG 525
ELPTI+FKGLDNLIATARSNKVAV LGFQDFSQL RDYGDKEA V+M+TVGN+FSGQVVG
Sbjct: 301 ELPTIFFKGLDNLIATARSNKVAVVLGFQDFSQLKRDYGDKEAAVIMSTVGNVFSGQVVG 360
Query: 526 ETAKTLSERFGKVLQKRQSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNF 585
ETAKTLSERFGK+LQKR+S+SINR D STSINTQ+D+LIP SKIS L+QGMFVG+V+DNF
Sbjct: 361 ETAKTLSERFGKILQKRESMSINRNDTSTSINTQLDSLIPASKISTLSQGMFVGAVADNF 420
Query: 586 NERIEQKIFHCEIVVDAEKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEV 645
E IEQKIFH +IVVD E V++E +AY+ IP I++F DE+GND M++ +QANYR+IK+++
Sbjct: 421 GETIEQKIFHAQIVVDNEAVQKETAAYQPIPEISSFLDENGNDTMEQQIQANYRQIKQDI 480
Query: 646 KQIVQEELERIKNDPVLCKLLPDNE 670
++V+ EL RI+NDP L K L +NE
Sbjct: 481 VELVENELIRIENDPEL-KYLLNNE 504
>gi|156861370|gb|EDO54801.1| hypothetical protein BACUNI_01786 [Bacteroides uniformis ATCC 8492]
Length = 401
Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats.
Identities = 347/359 (96%), Positives = 351/359 (97%)
Query: 308 VQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSYPELEN 367
VQKQGDFFVESPIILFASIIWYLKIYQ GK+CTFPHAIEFLNRRYEDIFPILTSYPELEN
Sbjct: 40 VQKQGDFFVESPIILFASIIWYLKIYQGGKYCTFPHAIEFLNRRYEDIFPILTSYPELEN 99
Query: 368 YLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEPKILCV 427
YLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEPKILCV
Sbjct: 100 YLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEPKILCV 159
Query: 428 GNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATARSNKV 487
GNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATARSNKV
Sbjct: 160 GNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATARSNKV 219
Query: 488 AVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQKRQSISI 547
AVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQKRQSISI
Sbjct: 220 AVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQKRQSISI 279
Query: 548 NRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDAEKVKR 607
NRQDVSTSINTQMD+LIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDAEKV+R
Sbjct: 280 NRQDVSTSINTQMDSLIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDAEKVRR 339
Query: 608 EESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDPVLCKLL 666
EE AYKKIPVIT+FTD DGNDRMKETVQANYRRIKEEVKQIVQEELERI ND L LL
Sbjct: 340 EEKAYKKIPVITDFTDGDGNDRMKETVQANYRRIKEEVKQIVQEELERIANDENLKHLL 398
>gi|146301499|ref|YP_001196090.1| Type IV secretory pathway VirD4 components-like protein
[Flavobacterium johnsoniae UW101]
gi|146155917|gb|ABQ06771.1| Type IV secretory pathway VirD4 components-like protein
[Flavobacterium johnsoniae UW101]
Length = 658
Score = 681 bits (1756), Expect = 0.0, Method: Composition-based stats.
Identities = 335/659 (50%), Positives = 458/659 (69%), Gaps = 12/659 (1%)
Query: 3 QQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLF 62
Q ++ +AL KI+D R +SI++++++ Y++CY A R W + + D+IL + +T GLF
Sbjct: 2 QTGENEQALRKILDMTRLMSIMVLLLHFYYYCYGAFRFWDLTGTLADQILTSVYKT-GLF 60
Query: 63 HSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPLEA 122
S ++K S+ LL +S LG KG K EK + + A G L+FL+ L
Sbjct: 61 GSFHFSKCISLGLLVISLLGAKGRKDEKRQFKTAFYYTAFGLALYFLSGTALLFYGSEPL 120
Query: 123 VTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLME-DVFNNENESFMQETRLIESEYSVNLP 181
+ LY+ T G++ +L GG +SR++K+ L + D+FN+ENE+F QE RL+E+EYS+NLP
Sbjct: 121 LAALYIGTTVLGFLLVLSGGTMLSRIIKNRLPDADIFNSENETFPQEERLLENEYSINLP 180
Query: 182 TRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYP 241
R+Y R + N WIN++NPFR +VLGTPGSGKSY V+ + I Q I KGFS ++YDFKY
Sbjct: 181 ARYYRRDKIRNSWINIINPFRGLLVLGTPGSGKSYFVIRHLITQHIAKGFSMFVYDFKYD 240
Query: 242 DLSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIML 301
DLS I YN + Y V PK Y INFD HRCNP+ P MEDITDA ESA TI+L
Sbjct: 241 DLSKIVYNTFEKYKHAYTVVPKCYFINFDAIM--HRCNPLDPQSMEDITDASESARTILL 298
Query: 302 NLNKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTS 361
LN+ W+++QGDFFVESPI +++IWYL+ Y+NG+FCT PH IE + Y+ +F +L +
Sbjct: 299 GLNREWIKRQGDFFVESPINFLSAVIWYLRRYKNGEFCTLPHVIELMQADYDSLFTLLRT 358
Query: 362 YPELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEE 421
E+E ++PF++A+L A EQL GQIASAKI ++R+ SPQLY+V+S ++FTLDINNP E
Sbjct: 359 DKEIEVLINPFVNAYLNDAMEQLEGQIASAKIAMARLSSPQLYYVLSGNDFTLDINNPLE 418
Query: 422 PKILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIAT 481
PKI+C+GNNP + IYGA L LY +R++KL+NKKG LKSS+I DE PTIY +D+LIAT
Sbjct: 419 PKIVCMGNNPQKIQIYGAVLSLYVNRLIKLVNKKGKLKSSLIFDEFPTIYLNNMDSLIAT 478
Query: 482 ARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQK 541
ARSNKV+ CLG QDFSQL +DYG ++A V+MN GNI SGQV G+TAK LSERFGK++Q
Sbjct: 479 ARSNKVSTCLGIQDFSQLRKDYGREQADVIMNLTGNIISGQVAGDTAKQLSERFGKIMQD 538
Query: 542 RQSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVD 601
R+SISIN D S S + Q++A +PPSKIS L+ G FVG +D+ RI+ K FHCEIV D
Sbjct: 539 RESISINSSDASISRSRQLEAAVPPSKISSLSSGEFVGMTADDPQCRIKLKTFHCEIVND 598
Query: 602 AEKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDP 660
E ++REE Y +IP + + +Q N+++IK +V+ I+ E+ER+ NDP
Sbjct: 599 HEALRREEENYTEIPPVRHLD--------SGMIQRNFQQIKCDVQDIIYTEMERLLNDP 649
>gi|146302116|ref|YP_001196707.1| Type IV secretory pathway VirD4 components-like protein
[Flavobacterium johnsoniae UW101]
gi|146156534|gb|ABQ07388.1| Type IV secretory pathway VirD4 components-like protein
[Flavobacterium johnsoniae UW101]
Length = 662
Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats.
Identities = 328/669 (49%), Positives = 459/669 (68%), Gaps = 10/669 (1%)
Query: 3 QQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLF 62
Q ++ +AL KI+D R + I +++++ Y++C+++ W + +IL N RT GL
Sbjct: 2 QTGENEQALRKILDMTRLMGIAVLLIHFYYYCFDSFMHWNLAPDFACRILENIYRT-GLL 60
Query: 63 HSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPLEA 122
S +KLF++ LL +S +G +G K EK+ + + ++G +L+F ++ + + L E
Sbjct: 61 DSFHKSKLFALGLLVISLMGARGRKDEKLHFRTAFNYISLGLLLYFGSYPAILIFLDPEV 120
Query: 123 VTGLYVLTIGTGYVCLLMGGLWMSRLLKHNL-MEDVFNNENESFMQETRLIESEYSVNLP 181
+ LY+ GY+ L GG +SR+++ L D+FN ENE+F QE RLIE+EYSVNLP
Sbjct: 121 CSVLYISLCSLGYLMTLSGGTLLSRIIRRKLGSADIFNKENETFPQEERLIENEYSVNLP 180
Query: 182 TRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYP 241
R++ + + + WIN++NPFR +V GTPGSGKSY V+ + I Q I KGFS +IYDFK+
Sbjct: 181 ARYHLKDKVRSSWINIINPFRGILVPGTPGSGKSYFVIRHIITQHIAKGFSMFIYDFKFD 240
Query: 242 DLSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIML 301
DL+ IAYN L Y V+PKFY+INFDD R+HRCNP+ P M DITDA ESA TI++
Sbjct: 241 DLTVIAYNAWLKFRHLYAVEPKFYIINFDDLSRTHRCNPLDPAAMTDITDAAESARTILM 300
Query: 302 NLNKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTS 361
LN+ W++KQGDFFVESPI ++IWYL+ Y +G+FCT PH IE + YE +F IL +
Sbjct: 301 GLNREWIKKQGDFFVESPINFLTAVIWYLRKYNDGEFCTLPHVIEMIQTDYESLFTILRT 360
Query: 362 YPELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEE 421
E+E ++PF+ A+L A +QL GQIASAKI L+++ SPQLY+V+S S+FTLDINNP +
Sbjct: 361 EKEIEVLINPFVSAFLNEAVDQLEGQIASAKISLAKLSSPQLYYVLSGSDFTLDINNPSD 420
Query: 422 PKILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIAT 481
PKI+ +GNNP + YGA L L+ SR++K +N+KG LKSS+I DE PTIY +D+LIAT
Sbjct: 421 PKIVSMGNNPQKIQTYGAVLSLFVSRLIKQVNQKGKLKSSLIFDEFPTIYLNNIDSLIAT 480
Query: 482 ARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQK 541
ARSNKV+ CLG QDFSQL +DYG ++A V++N VGNI GQV G+TAK LSERFGK++Q
Sbjct: 481 ARSNKVSTCLGIQDFSQLRKDYGREQADVIINIVGNIVCGQVSGDTAKQLSERFGKIMQD 540
Query: 542 RQSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVD 601
R+S+SIN D S S + Q+++ +PPSKIS L+ G FVG +DN + RIE K FHCEI+ D
Sbjct: 541 RESLSINSSDTSISRSRQLESAVPPSKISSLSSGEFVGMTADNPDCRIELKTFHCEIIND 600
Query: 602 AEKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDPV 661
EK+K+E YK+IP+I + +Q NY +IK E+++I+ E+ERI P
Sbjct: 601 HEKIKKETDNYKEIPIIRTIDN--------VIIQKNYLQIKIEIQEIIHSEMERIIKSPQ 652
Query: 662 LCKLLPDNE 670
L L+ E
Sbjct: 653 LSSLVLKKE 661
>gi|146301306|ref|YP_001195897.1| Type IV secretory pathway VirD4 components-like protein
[Flavobacterium johnsoniae UW101]
gi|146155724|gb|ABQ06578.1| Type IV secretory pathway VirD4 components-like protein
[Flavobacterium johnsoniae UW101]
Length = 662
Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats.
Identities = 314/649 (48%), Positives = 440/649 (67%), Gaps = 10/649 (1%)
Query: 9 RALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLFHSILYT 68
+AL KI+D R +SI+L+ ++ Y++ Y + G+ D+IL N R AGLF +
Sbjct: 8 QALRKILDMTRLISIVLLAIHFYYYGYFVFKQLGLVSQFSDRILENISR-AGLFSYFHKS 66
Query: 69 KLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPLEAVTGLYV 128
KL ++L + +S LG KG K EK+ + G +F W++L LE V +YV
Sbjct: 67 KLLALLFVLISLLGAKGRKNEKLKLKKAVLFLLAGLFFYFAGWFILQTGCSLEIVFLIYV 126
Query: 129 LTIGTGYVCLLMGGLWMSRLLKHNL-MEDVFNNENESFMQETRLIESEYSVNLPTRFYYR 187
LT +G + ++ G ++R++ +L D+FN ENE+F QE RL+E+EYS+NLP ++Y R
Sbjct: 127 LTTSSGLLLIITAGTLLTRIVSRSLNSRDIFNKENETFPQEERLLENEYSINLPAQYYLR 186
Query: 188 KRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIA 247
+ WIN++NPFR +V G+PGSGKSY V+ + I Q I KGFS ++YDFK+ DL+ I
Sbjct: 187 DKIRKSWINIINPFRGVLVCGSPGSGKSYFVILHIITQHIAKGFSMFVYDFKFDDLTRIV 246
Query: 248 YNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTW 307
YN L H YKV P+FYVINFDD R+HRCNP+ P M DITDA ESA TI+L LN+ W
Sbjct: 247 YNAYLKHRHLYKVVPEFYVINFDDLSRTHRCNPLDPSSMTDITDAAESARTILLGLNREW 306
Query: 308 VQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSYPELEN 367
++KQGDFFVESPI ++IWYL+ + +G+FCT PH IE + Y+ +F +L S E+E
Sbjct: 307 IRKQGDFFVESPINFLTAVIWYLRKFNDGEFCTLPHVIELMQLDYKILFTLLRSEKEIEV 366
Query: 368 YLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEPKILCV 427
++PF+ A+L A+EQL GQIASAKI ++R+ SPQLY+V+S ++FTLDINNP+ PKI+C+
Sbjct: 367 LINPFVSAFLNNASEQLEGQIASAKISMARLSSPQLYYVLSGNDFTLDINNPDAPKIVCM 426
Query: 428 GNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATARSNKV 487
GNNP + YGA L LY SR+VKL N+K LKSS+I DE PT+Y +D+LIATARSNKV
Sbjct: 427 GNNPQKIQTYGAVLSLYISRLVKLANRKDKLKSSLIFDEFPTVYLNNIDSLIATARSNKV 486
Query: 488 AVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQKRQSISI 547
+ LG QD SQL +DYG ++A V+MN GNI SGQV G+TAK LSERFGK++Q+R+S+SI
Sbjct: 487 STTLGIQDLSQLKKDYGREQADVIMNITGNIISGQVTGDTAKQLSERFGKIMQERESLSI 546
Query: 548 NRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDAEKVKR 607
N + S S + Q+++ +P SKI+ L+ G FVG +DN + +IE K FHCE++ D +++
Sbjct: 547 NSSETSISRSRQLESAVPASKIASLSSGEFVGMTADNPDCKIELKTFHCEVLNDHNALRQ 606
Query: 608 EESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERI 656
E YK+I I N + V NY I+EE+ ++ + E++RI
Sbjct: 607 EMDNYKEIEPIRNLDNAQ--------VNRNYTMIREEIHELSESEMDRI 647
>gi|156861367|gb|EDO54798.1| hypothetical protein BACUNI_01783 [Bacteroides uniformis ATCC 8492]
Length = 308
Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats.
Identities = 282/308 (91%), Positives = 299/308 (97%)
Query: 1 MSQQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAG 60
MSQQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGV+IGVVD+IL+NF+RTAG
Sbjct: 1 MSQQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVDIGVVDRILMNFNRTAG 60
Query: 61 LFHSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPL 120
LF SILYTKLF+VLLLALSCLGTKGVKGEKITWG+IW AVGFVLFFLNWW+L LPLP+
Sbjct: 61 LFRSILYTKLFAVLLLALSCLGTKGVKGEKITWGKIWAVLAVGFVLFFLNWWILALPLPV 120
Query: 121 EAVTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNL 180
EAVTGLY+LT+G GYV LLMGGLW+SRLLKHNLM+DVFNNENESFMQETRLIESEYSVNL
Sbjct: 121 EAVTGLYILTVGAGYVFLLMGGLWLSRLLKHNLMDDVFNNENESFMQETRLIESEYSVNL 180
Query: 181 PTRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKY 240
PTRFYY+KRWNNGWINVVNPFRASIVLGTPGSGKSYAVVN+FIKQQIEKGFS Y+YDFK+
Sbjct: 181 PTRFYYKKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNSFIKQQIEKGFSMYVYDFKF 240
Query: 241 PDLSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIM 300
DLSTIAYNHLLNHP+GYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIM
Sbjct: 241 SDLSTIAYNHLLNHPEGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIM 300
Query: 301 LNLNKTWV 308
LNLNKTWV
Sbjct: 301 LNLNKTWV 308
>gi|156859764|gb|EDO53195.1| hypothetical protein BACUNI_03210 [Bacteroides uniformis ATCC 8492]
Length = 401
Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats.
Identities = 285/361 (78%), Positives = 317/361 (87%)
Query: 308 VQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSYPELEN 367
+ KQGDFFVESPIIL ASIIWYLKIY+NGK+CTFPHAIEFLNR+Y DIFPILTSYPELEN
Sbjct: 40 ISKQGDFFVESPIILLASIIWYLKIYKNGKYCTFPHAIEFLNRKYADIFPILTSYPELEN 99
Query: 368 YLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEPKILCV 427
YLSPFMDAW A EQL GQIASAKIPLSRMISP LYWVM+ +FTLDINNPEEPK+L V
Sbjct: 100 YLSPFMDAWESSAVEQLQGQIASAKIPLSRMISPALYWVMTADDFTLDINNPEEPKVLVV 159
Query: 428 GNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATARSNKV 487
GNNPDRQ IYGAALGLYNSRIVKLINKK LKS+VIIDELPTIY +GLDNLIATARSNKV
Sbjct: 160 GNNPDRQGIYGAALGLYNSRIVKLINKKKRLKSAVIIDELPTIYMRGLDNLIATARSNKV 219
Query: 488 AVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVLQKRQSISI 547
AV LGFQDFSQL RDYGDKE+ V+ NTVGN+F+GQVV ETAKTLSERFGKVLQKRQ+++I
Sbjct: 220 AVMLGFQDFSQLKRDYGDKESAVICNTVGNVFAGQVVAETAKTLSERFGKVLQKRQNMTI 279
Query: 548 NRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDAEKVKR 607
NR + S SINTQMD+LIP SKIS LTQGMFVG+V+DNF+ERIEQKIFH EIVVD E+VKR
Sbjct: 280 NRNETSVSINTQMDSLIPASKISTLTQGMFVGAVADNFDERIEQKIFHAEIVVDNEQVKR 339
Query: 608 EESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEELERIKNDPVLCKLLP 667
E + Y KIP I +FTD+DGND M++ + ANY RIK EV+QIV +E+ERIK DP L L+
Sbjct: 340 ETARYVKIPQIIDFTDKDGNDTMQQQIDANYYRIKNEVRQIVADEIERIKADPELSHLIK 399
Query: 668 D 668
D
Sbjct: 400 D 400
>gi|10444283|gb|AAG17844.1|AF289050_19 unknown [Bacteroides thetaiotaomicron]
Length = 234
Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats.
Identities = 225/234 (96%), Positives = 230/234 (98%)
Query: 1 MSQQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAG 60
MSQQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAG
Sbjct: 1 MSQQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAG 60
Query: 61 LFHSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPL 120
LFHSILYTKLF+VLLLALSCLGTKGVKGEKITWGRIWTA A GFVLFFLNWW+L LPLP+
Sbjct: 61 LFHSILYTKLFAVLLLALSCLGTKGVKGEKITWGRIWTALAAGFVLFFLNWWILALPLPV 120
Query: 121 EAVTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNL 180
EAVTGLY+LTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNL
Sbjct: 121 EAVTGLYILTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNL 180
Query: 181 PTRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQY 234
PTRFYY+KRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFS Y
Sbjct: 181 PTRFYYKKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSMY 234
>gi|156859760|gb|EDO53191.1| hypothetical protein BACUNI_03206 [Bacteroides uniformis ATCC 8492]
Length = 392
Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats.
Identities = 224/306 (73%), Positives = 262/306 (85%)
Query: 3 QQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLF 62
Q EDDLR LAK+M+F+RA+SI+ VV+N+YWFCY+++R WG++IGVVD+ILL F RTAGLF
Sbjct: 87 QNEDDLRGLAKVMEFMRAISILFVVINIYWFCYQSVREWGIDIGVVDRILLGFQRTAGLF 146
Query: 63 HSILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAFAVGFVLFFLNWWLLPLPLPLEA 122
SIL+TKLF+VL LALSCLGTKGVK +KITW RI G +LFF N WLL LPL L A
Sbjct: 147 SSILWTKLFAVLFLALSCLGTKGVKEQKITWRRIILCGVSGLLLFFGNGWLLALPLSLPA 206
Query: 123 VTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESEYSVNLPT 182
T LY+ T+ GY+CLLM GLWMSRLLK +L+EDVFN ENESFMQET L E+EYSVNL T
Sbjct: 207 GTVLYIATLTAGYICLLMAGLWMSRLLKTDLLEDVFNVENESFMQETELKENEYSVNLRT 266
Query: 183 RFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPD 242
RF++R R +GWIN+VNPFRA++VLGTPGSGKSYA++N +IKQ IEKG+S ++YDFKYPD
Sbjct: 267 RFWFRGRAYDGWINLVNPFRATMVLGTPGSGKSYAIINQYIKQTIEKGYSLFLYDFKYPD 326
Query: 243 LSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLN 302
LS IAYNHLL H DGYKVKPKFYVINFD+PR SHRCNPIHPDFM DI+DAYESAYTIMLN
Sbjct: 327 LSEIAYNHLLAHLDGYKVKPKFYVINFDNPRESHRCNPIHPDFMTDISDAYESAYTIMLN 386
Query: 303 LNKTWV 308
LN+TWV
Sbjct: 387 LNRTWV 392
>gi|52421250|ref|YP_087162.1| putative mobilization protein [Bacteroides fragilis YCH46]
gi|52218771|dbj|BAD51363.1| putative mobilization protein [Bacteroides fragilis YCH46]
Length = 650
Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats.
Identities = 252/656 (38%), Positives = 394/656 (60%), Gaps = 21/656 (3%)
Query: 6 DDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLFHSI 65
++ + L K+ +++ I +++ ++ F W + +L R ++ +I
Sbjct: 2 EESKELQKLYTLMQSFVYITIIVEIFLFIEFPFSNW------IMPMLSKLSRIP-IYSNI 54
Query: 66 LYTKLFSVLLLALSCLGTKGVKGEKITWGR-IWTAFAVGFVLFFLNWWLLPLPLPLEAVT 124
Y+KLF++LL+ ++C+GT+ K G+ I VG + FF L +
Sbjct: 55 FYSKLFTLLLIMITCVGTRSKKDLNFDAGKQIALPLIVGLITFFGCAGFLLIREGHNNYM 114
Query: 125 GLYVLT-IGTGYVCLLMGGLWM---SRLLKHNLMEDVFNNENESFMQETRLIESEYSVNL 180
+ LT IG ++ ++ + + S+++K N M+D FN ENESF Q L+ +EYSVN+
Sbjct: 115 DWFNLTYIGLSFLGAMLINVGLDNISKIIKTNFMKDRFNVENESFEQSRELVNTEYSVNI 174
Query: 181 PTRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKY 240
P +FYY+K+ N GWIN+VNPFR + V+GTPGSGKS++V+N+FI+Q EKGF+ +YDFK+
Sbjct: 175 PMKFYYKKKQNKGWINIVNPFRGTFVIGTPGSGKSFSVINSFIRQHSEKGFAMVVYDFKF 234
Query: 241 PDLSTIAYNHLLNHPDGYKV--KPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYT 298
PDL+ IAY + +++ KV K KF V+NF D S R NP+ +++E + DA E+A
Sbjct: 235 PDLAKIAYYNYIDNKRKGKVSNKFKFNVVNFSDVEYSRRVNPLKREYIETLADATETAEA 294
Query: 299 IMLNLNK-TWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFP 357
+ +L K DFF S + L A+ I++ Y+ GK+ PH + FLNR+Y+ +F
Sbjct: 295 LYESLQKGDKGNSNSDFFKTSAVNLLAASIYFWSRYEGGKYSDLPHVLSFLNRKYDILFK 354
Query: 358 ILTSYPELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDIN 417
+L S PELE+ +SPF A+ GA +QL GQ+AS K+ LSR+ + + +WV S + L ++
Sbjct: 355 VLFSEPELESLVSPFQAAYESGAVDQLEGQMASLKVQLSRLATKESFWVFSGDDINLKVS 414
Query: 418 NPEEPKILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDN 477
+ E P L + NNP Q++ A L +RI +L+N KG L +S+++DE PT+YF L
Sbjct: 415 DKENPSYLIIANNPKNQSMNSALNALIINRITRLVNTKGNLPTSIVVDESPTLYFYQLAT 474
Query: 478 LIATARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQV-VGETAKTLSERFG 536
L++TARSNKV+VCLG Q+ QL YG AK V + +GN SG ET L + FG
Sbjct: 475 LLSTARSNKVSVCLGLQEIPQLEEQYGKATAKTVCSVIGNTLSGSARAPETLDWLQKMFG 534
Query: 537 KVLQKRQSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNF--NERIEQKIF 594
K+ Q ++ ISI R+ + S+N QMD +IP SKI+ L G VG V+ +F E ++
Sbjct: 535 KIKQVKEGISITREKTTVSVNEQMDFIIPASKIASLQAGSLVGQVALDFGQEENFPTTLY 594
Query: 595 HCEIVVDAEKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQ 650
+C+ +D K+K+EE+ YK++P NF + +R +Q+NY+RIKEEV ++++
Sbjct: 595 NCKTNLDLNKIKKEETNYKELPKFYNFGTTEERER---KLQSNYKRIKEEVTEVIE 647
>gi|60650159|ref|YP_209712.1| putative plasmid transfer protein [Bacteroides fragilis NCTC 9343]
gi|60495239|emb|CAH05732.1| putative plasmid transfer protein [Bacteroides fragilis NCTC 9343]
Length = 651
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 231/603 (38%), Positives = 371/603 (61%), Gaps = 15/603 (2%)
Query: 61 LFHSILYTKLFSVLLLALSCLGTKGVKGEKIT-WGRIWTAFAVGFVLFFLNWWLLPLPLP 119
++ +ILY+KLF+ ++ ++C+GT+ K ++ +I GF++FF + L
Sbjct: 50 IYSNILYSKLFTFFIIMVTCIGTRSKKDLELDPTKQIIFPLIFGFIMFFGSVCFLFFKEK 109
Query: 120 ----LEAVTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESE 175
LE Y++ G + + +S+ +K N M+D FN ENESF Q +E+E
Sbjct: 110 GENGLEWYNIAYIILSIIGAILINSALDNISKRIKSNFMKDRFNIENESFEQSKNKVETE 169
Query: 176 YSVNLPTRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYI 235
YSVN+P +F+Y ++W+NGW+N+ N FR + V+GTPGSGKS++V+N+FI+Q KGF++ +
Sbjct: 170 YSVNIPMKFFYNRKWHNGWLNICNCFRGTFVIGTPGSGKSFSVINSFIRQHSAKGFAEVV 229
Query: 236 YDFKYPDLSTIAYNHLLNHPDGYKVKP--KFYVINFDDPRRSHRCNPIHPDFMEDITDAY 293
YDFK+P+L+ IAY + + K+ KF VINF D S R NP+ +++E + DA
Sbjct: 230 YDFKFPELAKIAYYNYQKNKQLGKIPNNFKFNVINFSDIEYSRRINPLKREYIEILADAT 289
Query: 294 ESAYTIMLNLNKTWVQKQG--DFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRR 351
E+A + +L K G DFF S + L A+ I++ Y+NGK+ PH + FLN+
Sbjct: 290 ETAEALYESLQKGDKGSGGNSDFFKTSAVNLLAASIYFWSRYENGKYSDLPHVLAFLNQE 349
Query: 352 YEDIFPILTSYPELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSE 411
Y+ +F +L S PEL++ +SPF A+ GA +QL GQ+AS K+ LSR+ + + +WV S ++
Sbjct: 350 YDVLFKVLFSEPELKSLVSPFEAAYKSGAVDQLEGQMASLKVQLSRLATKESFWVFSGND 409
Query: 412 FTLDINNPEEPKILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIY 471
F L +++ +P L + NNP Q++ A L +R+ +L+N KG +S+I+DE PT+Y
Sbjct: 410 FNLKVSDKTDPSYLIIANNPKTQSMNSALNALIINRLTRLVNTKGNYPTSIIVDECPTLY 469
Query: 472 FKGLDNLIATARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVG-ETAKT 530
F L L++TARSNKV++CLG Q+ QL YG AK + + +GN SGQ ET
Sbjct: 470 FYQLATLLSTARSNKVSICLGLQELPQLEEQYGKATAKTITSIIGNTLSGQAKAPETLDW 529
Query: 531 LSERFGKVLQKRQSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNER-- 588
L + FGKV Q ++ ++I R + + ++N QMD +IP SKIS L G VG V+ +F +
Sbjct: 530 LQKLFGKVKQVKEGVTIRRNETTINMNEQMDFVIPASKISSLQAGTLVGQVALDFGQEDN 589
Query: 589 IEQKIFHCEIVVDAEKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQI 648
+HC+ +D +K+K+EE AYK++P + NF D +++ +Q N++RI +EV+ +
Sbjct: 590 FPTATYHCKTNLDLKKIKKEEEAYKELPKVYNFGTADNREKL---LQKNFKRIYDEVETV 646
Query: 649 VQE 651
+++
Sbjct: 647 IEQ 649
>gi|156107162|gb|EDO08907.1| hypothetical protein BACOVA_04764 [Bacteroides ovatus ATCC 8483]
Length = 728
Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats.
Identities = 222/737 (30%), Positives = 375/737 (50%), Gaps = 98/737 (13%)
Query: 3 QQEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRL--WG---VNI-GVVDKILLNFD 56
++ +L+ KI RAV I V+M + + + L WG ++I G + + ++ D
Sbjct: 2 EESKELQGFYKI---FRAVIYISVLMEFFEYAIDPAMLDHWGGILIDIHGRIKQWMIYND 58
Query: 57 RTAGLFHSILYTKLFSVLLLALSCLGTKGVKGEKITWGR-IWTAFAVGFVLFFLNWWLLP 115
+++Y+K+ + LL+ ++C+GT+ K + R + G L + WL
Sbjct: 59 ------GNLVYSKIATFLLICITCIGTRNKKHLEFDARRQVLYPLISGLFLIVFSVWLYH 112
Query: 116 LP-------LPLEAVTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQE 168
P LPL + Y+ T G + + + +S+ +K L +D FN ENESF Q
Sbjct: 113 HPMETRLYTLPLNII--FYMATTLVGVILVHIALDNISKFIKEGLGKDRFNFENESFEQS 170
Query: 169 TRLIESEYSVNLPTRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIE 228
+E++YSVN+P R+YY+ ++ GW+++ N FR + V+GTPGSGK+++++ FI+Q
Sbjct: 171 EEKVENQYSVNIPMRYYYKGKFRKGWVSISNCFRGTWVVGTPGSGKTFSIIEPFIRQHSA 230
Query: 229 KGFSQYIYDFKYPDLSTIAYNHLLNHPDGYKVKP--KFYVINFDDPRRSHRCNPIHPDFM 286
KGF+ +YD+K+P L+T Y H + K+ KF +INF D S R NPI ++
Sbjct: 231 KGFAMVVYDYKFPTLATKLYYHYKKNQKLGKLPKGCKFNIINFVDVEYSKRVNPIQAKYI 290
Query: 287 EDITDAYESAYTIMLNLNKTWVQK---QGDFFVESPIILFASIIWYLKIYQN-------- 335
++ A E+A T++ +L K + FF S + A+ I++ Y+
Sbjct: 291 NNLAAASETAETLLESLQKGKKEGGGGSDQFFQTSAVNFLAACIYFFVNYEREPYDANGK 350
Query: 336 ------------------------------------GKFCTFPHAIEFLNRRYEDIFPIL 359
GK+ PH + FLN Y+ IF +L
Sbjct: 351 KLYAEKRQDPQTKFWKPTGVVRDREGGSIVEPAYWLGKYSDMPHILSFLNESYQTIFEVL 410
Query: 360 TSYPELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDS--EFTLDIN 417
+ E+ L PF A+ A EQL G I + ++ SR+ + + YW+ +F L ++
Sbjct: 411 ETDNEVAPLLGPFQTAFKNKAMEQLEGMIGTLRVYTSRLATKESYWIFHKDGDDFDLKVS 470
Query: 418 NPEEPKILCVGNNPDRQNIYGAALGLYNSRIVKLIN--KKGMLKSSVIIDELPTIYFKGL 475
+P+ P L + N+P+ ++I GA L +R+V +N + + S+I+DELPT+YF +
Sbjct: 471 DPKSPSYLLIANDPEMESIIGALNALILNRLVTRVNTGQGKNIPVSIIVDELPTLYFHKI 530
Query: 476 DNLIATARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQV-VGETAKTLS-E 533
D LI TARSNKV+V LGFQ+ QL DYG + ++ TVGN+ SG ET + LS +
Sbjct: 531 DRLIGTARSNKVSVTLGFQELPQLEADYGKVGMQKIITTVGNVVSGSARAKETLEWLSND 590
Query: 534 RFGKVLQKRQSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNF-------- 585
FGKV+Q ++ ++I+R S ++N MD+L+P SKIS + G G + +F
Sbjct: 591 IFGKVVQVKKGVTIDRDKTSINLNENMDSLVPASKISDMATGWICGQTARDFVKTKTGTG 650
Query: 586 -------NERIEQKIFHCEIVVDAEKVKREESAYKKIPVITNFTDEDGNDRMKETVQANY 638
+E + F C+ D +++K EE+AY +P F + +R+ + N+
Sbjct: 651 GSMNIQESEEFKTTKFFCKTDFDMKEIKAEEAAYVPLPKFYTFKSREERERI---LYKNF 707
Query: 639 RRIKEEVKQIVQEELER 655
++ ++VK ++ + L +
Sbjct: 708 IQVGQDVKDMITDVLNK 724
>gi|145308114|gb|ABP57300.1| hypothetical protein bst027 [Bacteroides uniformis]
Length = 728
Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats.
Identities = 210/668 (31%), Positives = 348/668 (52%), Gaps = 85/668 (12%)
Query: 65 ILYTKLFSVLLLALSCLGTKGVKGEKITWGRIWTAF---------AVGFVLFFLNWWLLP 115
++Y+K+ ++LL+ ++C+GT+ K + R F + LF +
Sbjct: 61 LVYSKIATILLICITCIGTRNKKHLEFN-ARKQVIFPLTGGLLLLVLSVWLFGHPMEMRL 119
Query: 116 LPLPLEAVTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESE 175
LPL + LY+ G + + + +S+ +K LM+D FN ENESF Q + E++
Sbjct: 120 YTLPLNRI--LYMAASLVGVILVHIALDNISKFIKEGLMKDRFNFENESFEQSEEIQENK 177
Query: 176 YSVNLPTRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYI 235
YSVN+P R+YY+ ++ GW+++ NPFR + V+GTPGSGK+++++ FI+Q KGF+ +
Sbjct: 178 YSVNIPMRYYYKGKFRKGWVSISNPFRGTWVVGTPGSGKTFSIIEPFIRQHSAKGFAMVV 237
Query: 236 YDFKYPDLSTIAYNHL-LNHPDGYKVKP-KFYVINFDDPRRSHRCNPIHPDFMEDITDAY 293
YD+K+P L+T Y H LN G K KF +INF D S R NPI ++ ++ A
Sbjct: 238 YDYKFPTLATKLYYHYKLNEKLGRVPKGCKFNMINFVDVEYSRRVNPIQAKYINNLAAAS 297
Query: 294 ESAYTIMLNLNKTWVQK---QGDFFVESPIILFASIIWYLKIYQN--------------- 335
E+A T++ +L K + FF S + A+ I++ Y+
Sbjct: 298 ETAETLLESLQKGKKEGGGGSDQFFQTSAVNFLAACIYFFVNYEREPYDKDGNMLYAEKR 357
Query: 336 -----------------------------GKFCTFPHAIEFLNRRYEDIFPILTSYPELE 366
GK+ PH + FLN Y+ IF +L + E+
Sbjct: 358 QDPETKFWKPTGVVRDKEGGNIVEPAYWLGKYSDMPHILSFLNESYQTIFEVLETDNEVA 417
Query: 367 NYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVM--SDSEFTLDINNPEEPKI 424
L PF A+ A EQL G I + ++ SR+ + + YW+ +F L +++P+ P
Sbjct: 418 PLLGPFQTAFRNKAMEQLEGMIGTLRVYTSRLATKESYWIFHRDGDDFDLKVSDPKNPSY 477
Query: 425 LCVGNNPDRQNIYGAALGLYNSRIVKLIN--KKGMLKSSVIIDELPTIYFKGLDNLIATA 482
L + N+P+ ++I GA L +R+V +N + + S+I+DELPT+YF +D LI TA
Sbjct: 478 LLIANDPEMESIIGALNALILNRLVTRVNTGQGKNIPVSIIVDELPTLYFHKIDRLIGTA 537
Query: 483 RSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVG-ETAKTLS-ERFGKVLQ 540
RSNKV+V LGFQ+ QL DYG + ++ TVGN+ SG ET + LS + FGKV+Q
Sbjct: 538 RSNKVSVTLGFQELPQLEADYGKVGMQKIITTVGNVVSGSARSKETLEWLSNDIFGKVVQ 597
Query: 541 KRQSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNF--------------- 585
++ ++I+R S ++N MD+L+P SKIS + G G + +F
Sbjct: 598 VKKGVTIDRDKTSINLNENMDSLVPASKISDMATGWICGQTARDFVKTKTGVGGSMNIQE 657
Query: 586 NERIEQKIFHCEIVVDAEKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEV 645
+E + F C+ D ++K+EE+AY +P F + +R+ + N+ ++ ++V
Sbjct: 658 SEEFKTTKFFCKTDFDMGEIKKEEAAYVPLPRFYTFKSREERERI---LYKNFVQVGQDV 714
Query: 646 KQIVQEEL 653
K+++++ L
Sbjct: 715 KEMIKDVL 722
>gi|53714107|ref|YP_100099.1| putative mobilization protein [Bacteroides fragilis YCH46]
gi|52216972|dbj|BAD49565.1| putative mobilization protein [Bacteroides fragilis YCH46]
Length = 728
Score = 332 bits (850), Expect = 8e-89, Method: Composition-based stats.
Identities = 209/666 (31%), Positives = 344/666 (51%), Gaps = 83/666 (12%)
Query: 64 SILYTKLFSVLLLALSCLGTKGVKGEKITWGR--------IWTAFAVGFVLFFLNWWLLP 115
+++Y+K+ +VLL+ ++C+GT+ K + R + LF
Sbjct: 60 NLVYSKIATVLLICITCVGTRNKKHLEFNARRQVVYPLTSGLLLLVLSVWLFGHTMETRL 119
Query: 116 LPLPLEAVTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLMEDVFNNENESFMQETRLIESE 175
LPL + LY++ G V + + +S+ +K LM+D FN ENESF Q +E+E
Sbjct: 120 YTLPLNII--LYMIASIAGVVLVHIALDNISKFIKEGLMKDRFNFENESFEQCEEKVENE 177
Query: 176 YSVNLPTRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYI 235
YSVN+P R+YY+ ++ GWI+V N FR + V+GTPGSGK+++++ FI+Q KGF+ +
Sbjct: 178 YSVNIPMRYYYKGKFRKGWISVSNCFRGTWVVGTPGSGKTFSIIEPFIRQHSAKGFAMVV 237
Query: 236 YDFKYPDLSTIAYNHLLNHPDGYKVKP--KFYVINFDDPRRSHRCNPIHPDFMEDITDAY 293
YD+K+P L+T Y H + +V KF +INF D S R NPI ++ ++ A
Sbjct: 238 YDYKFPTLATKLYYHYKKNEKLGRVPQGCKFNMINFVDVEYSRRVNPIQAKYINNLAAAS 297
Query: 294 ESAYTIMLNLNKTWVQK---QGDFFVESPIILFASIIWYLKIYQN--------------- 335
E+A T++ +L K + FF S + A+ I++ Y+
Sbjct: 298 ETAETLLESLQKGKKEGGGGSDQFFQTSAVNFLAACIYFFVNYEREPYDANGKPLYAERQ 357
Query: 336 -----------------------------GKFCTFPHAIEFLNRRYEDIFPILTSYPELE 366
GK+ PH + FLN Y+ IF +L + E+
Sbjct: 358 QDPQTKFWKPTGIVRDREGGNIVEPAYWLGKYSDMPHILSFLNESYQTIFEVLETDNEVA 417
Query: 367 NYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVM--SDSEFTLDINNPEEPKI 424
L PF A+ A EQL G I + ++ SR+ + + YW+ +F L +++P+ P
Sbjct: 418 PLLGPFQTAFKNKAMEQLEGMIGTLRVYTSRLATKESYWIFHRDGDDFDLKVSDPKNPSY 477
Query: 425 LCVGNNPDRQNIYGAALGLYNSRIVKLIN--KKGMLKSSVIIDELPTIYFKGLDNLIATA 482
L + N+P+ ++I GA L +R+V +N + + S+I+DELPT+YF +D LI TA
Sbjct: 478 LLIANDPEMESIIGALNALILNRLVTRVNTGQGKNIPVSIIVDELPTLYFHKIDRLIGTA 537
Query: 483 RSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQV-VGETAKTLS-ERFGKVLQ 540
RSNKV+V LGFQ+ QL DYG + ++ TVGN+ SG ET + LS + FGKV+Q
Sbjct: 538 RSNKVSVTLGFQELPQLEADYGKVGMQKIITTVGNVVSGSARAKETLEWLSNDIFGKVVQ 597
Query: 541 KRQSISINRQDVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNF--------------- 585
++ ++I+R S ++N MD L+P SKIS + G G + +F
Sbjct: 598 VKKGVTIDRDKTSINLNENMDNLVPASKISDMATGWICGQTARDFVKTKTGMGGSMNIQE 657
Query: 586 NERIEQKIFHCEIVVDAEKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEV 645
+E + F C+ D ++K+EE+AY +P F + +R+ + N+ ++ ++V
Sbjct: 658 SEEFKTTKFFCKTDFDMAEIKKEEAAYVPLPKFYTFKSREERERI---LYKNFVQVGQDV 714
Query: 646 KQIVQE 651
K+++++
Sbjct: 715 KEMIKD 720
>gi|156110068|gb|EDO11813.1| hypothetical protein BACOVA_02307 [Bacteroides ovatus ATCC 8483]
Length = 769
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 125/338 (36%), Positives = 196/338 (57%), Gaps = 26/338 (7%)
Query: 336 GKFCTFPHAIEFLNRRYEDIFPILTSYPELENYLSPFMDAWLGGAAEQLMGQIASAKIPL 395
G++ PH + FL R Y+ +F IL ++ + ++PF A+ A +QL G + + ++
Sbjct: 435 GEYSDMPHVLSFLGRPYDQVFNILMQDDKIASLMAPFKSAYENKANDQLEGMVGTLRVNA 494
Query: 396 SRMISPQLYWVMSDSEFTLDINNPEEPKILCVGNNPDRQNIYGAALGLYNSRIVKLINKK 455
+R++SP+ YWV + +F L I++ E P L + N+P+++ + G+ L +R++ +N K
Sbjct: 495 ARLVSPEAYWVFTGDDFDLKISDREHPSYLVIANDPEKEQVIGSLNALVLNRLITRVNSK 554
Query: 456 GMLKSSVIIDELPTIYFKGLDNLIATARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTV 515
G + S+I+DELPT+YF +D LI TARSNKVAV LGFQ+ QL DYG + ++ T
Sbjct: 555 GNIPVSIIVDELPTLYFHKIDRLIGTARSNKVAVTLGFQELPQLEADYGKVGMQKIITTC 614
Query: 516 GNIFSGQVVGETAKTL----SERFGKVLQKRQSISINRQDVSTSINTQMDALIPPSKISG 571
GNIF G +TL ++ FGK Q +SISIN Q VST+I+ +MD L+P +KI+
Sbjct: 615 GNIFMG--AARNKETLEWAQNDVFGKAKQTSRSISINDQKVSTTISEKMDYLVPAAKIAD 672
Query: 572 LTQGMFVGSVSDNF---NER------IEQK------IFHCEIVVDAEKVKREESAYKKIP 616
+ G G + +F +ER IEQ + C+ D +K+K EE Y +P
Sbjct: 673 MATGWLAGQAARDFTATDERMLNRFDIEQSEEFKTTKYFCKTHFDMKKIKEEEDHYVPLP 732
Query: 617 VITNFTDEDGNDRMKE-TVQANYRRIKEEVKQIVQEEL 653
I F NDR KE + N++R+ +EV+ +V+E L
Sbjct: 733 KIYEFK----NDREKEIMLNRNFKRVNQEVEDMVRELL 766
Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats.
Identities = 97/300 (32%), Positives = 161/300 (53%), Gaps = 23/300 (7%)
Query: 48 VDKILLNFDRTAGLFHSILYTKLFSVLLLALSCLGTKGVKGEK------ITWGRIWTAFA 101
+ + LL+ +F+S+ K+ ++ + + C+GTK K K + + +
Sbjct: 40 ITQFLLDLLGRFKIFNSVSGCKVTELVCICVVCIGTKAKKALKFNVRTMVVYPVLAGLTF 99
Query: 102 VGFVLFF------LNWWLLPLPLPLEAVTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLME 155
VG F ++W P L AV + +GT V + G+ ++ + + E
Sbjct: 100 VGLCFVFHGMDFGISWMGFPANRILYAVCSV----VGTMLVHQGLDGI--AKYYNYKVGE 153
Query: 156 DVFNNENESFMQETRLIESEYSVNLPTRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKS 215
D FN ENESF Q L+ ++YSVN+P +Y++++ + GWIN++NPFR +IVLGTPGSGKS
Sbjct: 154 DRFNFENESFQQSEALVSNDYSVNIPMIYYWKRKMHRGWINIINPFRGTIVLGTPGSGKS 213
Query: 216 YAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLLNHPDGYKVKPK--FYVINFDDPR 273
+ +++ FI+Q KGF+ YDFK+P L+ + + K+ F ++NF D
Sbjct: 214 FGIIDPFIRQHAAKGFAMMCYDFKFPTLAKTLFYQFCKNRKAGKLPDNCGFRIVNFTDVE 273
Query: 274 RSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTWVQKQGD---FFVESPIILFASIIWYL 330
S+R NPI ++ D+ A E+A T++ +LNK +K+G FF S A+II++
Sbjct: 274 YSNRINPIQRKYIPDLAAASETAATLLASLNKGGGEKKGGSEAFFTNSAENFLAAIIYFF 333
>gi|150005887|ref|YP_001300631.1| putative mobilization protein [Bacteroides vulgatus ATCC 8482]
gi|149934311|gb|ABR41009.1| putative mobilization protein [Bacteroides vulgatus ATCC 8482]
Length = 778
Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 120/338 (35%), Positives = 192/338 (56%), Gaps = 26/338 (7%)
Query: 336 GKFCTFPHAIEFLNRRYEDIFPILTSYPELENYLSPFMDAWLGGAAEQLMGQIASAKIPL 395
G++ PH + FL R Y+ +F IL ++ + ++PF A+ A +QL G + + ++
Sbjct: 444 GEYSDMPHVLSFLGRSYDQVFNILMQDDKIASLMAPFKSAYENKANDQLEGMVGTLRVNA 503
Query: 396 SRMISPQLYWVMSDSEFTLDINNPEEPKILCVGNNPDRQNIYGAALGLYNSRIVKLINKK 455
+R++SP+ YWV + +F L I++ P L + N+P+++ + G+ L +R++ +N K
Sbjct: 504 ARLVSPEAYWVFTGDDFDLKISDKANPSYLVIANDPEKEQVIGSLNALVLNRLITRVNSK 563
Query: 456 GMLKSSVIIDELPTIYFKGLDNLIATARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTV 515
G + S+I+DELPT+YF +D LI TARSNKVAV LGFQ+ QL DYG + ++ T
Sbjct: 564 GNIPVSIIVDELPTLYFHKIDRLIGTARSNKVAVTLGFQELPQLEADYGKVGMQKIITTC 623
Query: 516 GNIFSGQVVGETAKTL----SERFGKVLQKRQSISINRQDVSTSINTQMDALIPPSKISG 571
GNIF G +TL ++ FGK Q +SISIN VST+I+ +MD L+P +KI+
Sbjct: 624 GNIFMG--AARNKETLEWAQNDVFGKAKQTSRSISINDNKVSTTISEKMDYLVPAAKIAD 681
Query: 572 LTQGMFVGSVSDNF---------------NERIEQKIFHCEIVVDAEKVKREESAYKKIP 616
+ G G + +F +E + + C+ D +K+K EE+ Y +P
Sbjct: 682 MATGWLAGQAARDFTATDDSMLNHFDIEQSEEFKTTKYFCKTHFDMKKIKDEENHYVPLP 741
Query: 617 VITNFTDEDGNDRMKE-TVQANYRRIKEEVKQIVQEEL 653
I F NDR KE + N++R+ EEV ++V+E L
Sbjct: 742 KIYEFK----NDREKEIMLNRNFKRVNEEVDKMVKELL 775
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 110/331 (33%), Positives = 172/331 (51%), Gaps = 36/331 (10%)
Query: 48 VDKILLNFDRTAGLFHSILYTKLFSVLLLALSCLGTKGVKGEKITWGR--IWTAFA---- 101
V + +L+ +F+S+ K+ ++ + + C+GTK K K I+ A
Sbjct: 40 VTQFILDLLARFKVFNSVSGCKVAELICICVVCIGTKAKKALKFNVKTMVIYPVLAGLTL 99
Query: 102 VGFVLFF------LNWWLLPLPLPLEAVTGLYVLTIGTGYVCLLMGGLWMSRLLKHNLME 155
VG F ++W+ P A LY L G + + G +++ + + E
Sbjct: 100 VGMCFIFHGMNIGISWFGFP------ANRILYTLCSVVGTMLVHQGLDGIAKYYNYKVGE 153
Query: 156 DVFNNENESFMQETRLIESEYSVNLPTRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKS 215
D FN ENESF Q L+ ++YSVN+P +Y++++ + GWIN++NPFR +IVLGTPGSGKS
Sbjct: 154 DRFNFENESFQQSETLVANDYSVNIPMIYYWKQKMHKGWINIINPFRGTIVLGTPGSGKS 213
Query: 216 YAVVNNFIKQQIEKGFSQYIYDFKYPDLS-TIAYNHLLNHPDG-YKVKPKFYVINFDDPR 273
+ +++ FI+Q KGF+ YDFK+P L+ T+ Y + N G F +INF D
Sbjct: 214 FGIIDPFIRQHAAKGFAIMCYDFKFPTLAKTLFYQYCKNRKAGKLPQNCGFRIINFTDVE 273
Query: 274 RSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTWVQKQGD---FFVESPIILFASIIWYL 330
S R NPI ++ D+ A E+A T++ +LNK +K+G FF S A+II++
Sbjct: 274 YSDRINPIQRKYIPDLAAASETAATLLASLNKGGGEKKGGSEAFFTNSAENFLAAIIYF- 332
Query: 331 KIYQNGKFCTFPHAIEFLN----RRYEDIFP 357
F F H + F N +RY + P
Sbjct: 333 -------FVNF-HPVGFKNGKKLKRYVSLAP 355
>gi|150024585|ref|YP_001295411.1| Putative mobilization protein, TraG family [Flavobacterium
psychrophilum JIP02/86]
gi|149771126|emb|CAL42593.1| Putative mobilization protein, TraG family [Flavobacterium
psychrophilum JIP02/86]
Length = 645
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 141/478 (29%), Positives = 240/478 (50%), Gaps = 51/478 (10%)
Query: 192 NGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHL 251
+G + + NP+R + G GSGKS ++ I Q EK F+ +YDFK P+L+ + Y
Sbjct: 200 SGKVFLENPYRGIYIQGGAGSGKSASIFEPIITQCGEKQFTGMLYDFKSPELTNLVYLSY 259
Query: 252 LNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTWVQKQ 311
N KVK ++F P S R NPI P+++ A E A I+ NL ++K
Sbjct: 260 QN--TNVKVKN----VDFKQPLLSDRVNPIDPNYLGKSAIAMEYAQVILNNLLPESIKKP 313
Query: 312 GDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEF-LNRRYEDIFPILTSYPELENYLS 370
DF++ + ++ A +IWYL+ ++ K+CT PHAI L+ + + + ++ E ++
Sbjct: 314 -DFWISNAKMILAGVIWYLR-KEHPKYCTLPHAISLILHSQIDVLIEKISQDYEAGGMVA 371
Query: 371 PFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWVMSDSEFTLDINNPEEPKILCVGNN 430
++ GA + G +++ + LS + S ++W++S ++ L +NN E P LC+GN+
Sbjct: 372 SLRESIERGAERTVAGMLSTLQNALSGLNSHDIFWILSANDVDLHLNNKENPTFLCLGND 431
Query: 431 PDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATARSNKVAVC 490
Y A+ L S ++ +N+ KS V++DE PTI+ ++ + ATARSNK+A
Sbjct: 432 STLPTTYTPAISLIISVALRQMNQPHQQKSVVLLDEAPTIFIPNIEQIPATARSNKIATI 491
Query: 491 LGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVV-GETAKTLSERFGKVLQKRQSISINR 549
G QDF+QL YG+++A+V+++ +GN F G++ G+TA+ + F K+ I I++
Sbjct: 492 FGVQDFAQLADKYGNEKAQVIISNLGNQFFGRITNGKTAEMVQNLF----SKKDEIFISK 547
Query: 550 QD----------------VSTSINTQMDALIPPSKISGLTQGMFVGSVSDNF-NERIEQK 592
D TS Q + S + L QG F G +++ E ++ +
Sbjct: 548 NDGTGTSGQFVHLGSNTNAGTSEAVQERDRVKISDLVNLCQGEFYGIIAEGTPREFLKTQ 607
Query: 593 IFHCEIVVDAEKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQ 650
+I + E KIPV + ++ NY RI EE K I++
Sbjct: 608 FLQAKI--------KGEYINTKIPV------------NAQIMEDNYMRIIEECKTIIE 645
>gi|120435711|ref|YP_861397.1| TraG/TraD family protein [Gramella forsetii KT0803]
gi|117577861|emb|CAL66330.1| TraG/TraD family protein [Gramella forsetii KT0803]
Length = 527
Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats.
Identities = 130/492 (26%), Positives = 226/492 (45%), Gaps = 60/492 (12%)
Query: 172 IESEYSVNLPTRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGF 231
I Y VN TR K + G I R + ++G+ GSGK+ +VV F+K + F
Sbjct: 82 IAKMYQVNFKTR---GKDFKIGNIK-----RGASIIGSAGSGKTESVVYGFLKHFQQYNF 133
Query: 232 SQYIYDFKYPDLSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITD 291
I+D+K +L+ +AY N +K+ I+FD + HR NPI P +ME+
Sbjct: 134 CGVIHDYKDFELTEMAYPLFRNSDIPFKI------ISFD--KIIHRVNPIAPRYMENEES 185
Query: 292 AYESAYTIMLNL---NKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAI--- 345
E + ++ NL +T FF ++ L +IW LK ++CT PH I
Sbjct: 186 VNEISRVLIENLLEQKETGTSGTTKFFNDAAEGLIGGMIWKLKT-SYPQYCTLPHLIAIY 244
Query: 346 EFLNRRYEDIFPILTSYPELENYLSPFM-DAWLGG--AAEQLMGQIASAKIPLSRMISPQ 402
+FL+ E + L S N S M DA++ G + Q G ++ L R+ +
Sbjct: 245 QFLDT--ESLIAFLDS-----NRTSRAMADAFISGKDSERQTAGVKSTLANALKRISTQS 297
Query: 403 LYWVMSDSEFTLDINNPEEPKILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSV 462
++ +S + L+INNPE P ++ + NNP ++ Y + I K ++ + S +
Sbjct: 298 IFMALSADDVPLNINNPENPAVISIVNNPKFESSYSPVIAAIIHTITKQMSVRNSNPSFL 357
Query: 463 IIDELPTIYFKGLDNLIATARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQ 522
+++E PTI + + AT RS +A QD Q YGDK +K +++ + F G+
Sbjct: 358 LMEEAPTIRLLNMHRIPATLRSYDIATIYVMQDKIQNDMMYGDKASKAILSNLSYQFFGK 417
Query: 523 VVGETAKTLSERFGKVLQK-RQSISINRQ-DVSTSINTQMDAL--IPPSKISGLTQGMFV 578
V ERF ++++ +S+S + T + T + + I L QG F+
Sbjct: 418 VNDPDTAKYYERFFEIIKDPTKSVSSGHNLNFDTRVITGENEIPKIRADVFFRLKQGEFI 477
Query: 579 GSVSDNFNERIEQKIFHCEIVVDAEKVKREESAYKKIPVITNFTDEDGNDRMKETVQANY 638
+ +D +++I+ K+ +++ RE +P E+ + ++AN+
Sbjct: 478 -TYADGKDKKIQFKL---------QRILRE------LP-------EEIQEFSHAALEANF 514
Query: 639 RRIKEEVKQIVQ 650
+I EE + I +
Sbjct: 515 NKIYEEARSIFE 526
>gi|86141444|ref|ZP_01059990.1| mobilisation protein C [Flavobacterium sp. MED217]
gi|85832003|gb|EAQ50458.1| mobilisation protein C [Leeuwenhoekiella blandensis MED217]
Length = 529
Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 125/488 (25%), Positives = 213/488 (43%), Gaps = 54/488 (11%)
Query: 173 ESEYSVNLPTRFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFS 232
+S+Y V+ T G + N R + ++G+ GSGK+ +VV F+K + F
Sbjct: 85 DSKYQVSFTT--------TKGNFKLDNIKRGASIIGSAGSGKTESVVYGFLKHFRKDSFC 136
Query: 233 QYIYDFKYPDLSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDA 292
I+D+K +L+ +AY P F VI+FD + HR NPI P ++E+
Sbjct: 137 GIIHDYKDFELTEMAY------PLFKDSDIPFKVISFD--KIIHRVNPIAPRYLENEESV 188
Query: 293 YESAYTIMLNL---NKTWVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLN 349
E + ++ NL ++ FF ++ L +IW LK + CT PH I
Sbjct: 189 NEVSRVLIENLLEQRESGTTGTTKFFNDAAEGLIGGLIWKLKT-TYPQLCTLPHLIAIYQ 247
Query: 350 RRYEDIFPILTSYPELENYLSPFMDAWLGG--AAEQLMGQIASAKIPLSRMISPQLYWVM 407
D L + E DA++ G + Q G ++ L R+ + +++ +
Sbjct: 248 YLDTDS---LIQFLETNTTSRAMADAFISGKDSDRQTAGVKSTLANALKRISTQRIFMAL 304
Query: 408 SDSEFTLDINNPEEPKILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDEL 467
S E L+INN + P ++ + NNP + Y + I K ++ + S ++++E
Sbjct: 305 SADEVPLNINNEQNPAVISIVNNPKFETSYSPVIATIIHTITKQMSVRNSKPSFLLMEEA 364
Query: 468 PTIYFKGLDNLIATARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGET 527
PTI + + AT RS +A QD Q YGDK +K +++ + F G+V
Sbjct: 365 PTIRLLNMHRIPATLRSYDIATIYVMQDKIQNDMMYGDKASKAILSNLSYQFFGKVNDPD 424
Query: 528 AKTLSERFGKVLQKRQSISINRQ---DVSTSINT--QMDALIPPSKISGLTQGMFVGSVS 582
ERF +++ K + SI+R D T I T + I L QG F+ + +
Sbjct: 425 TAKYYERFFEII-KNPTKSISRGHNLDFDTRITTGEKETPKIRADIFFRLKQGEFI-TYA 482
Query: 583 DNFNERIEQKIFHCEIVVDAEKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIK 642
D +++++ K+ K+ R+ K ++ D N AN+ R+
Sbjct: 483 DGKDKKVQFKL---------SKINRQLPEGTK-----QYSSADMN--------ANFERVY 520
Query: 643 EEVKQIVQ 650
EV+ I Q
Sbjct: 521 AEVRSIFQ 528
>gi|60681021|ref|YP_211165.1| mobilisation protein C [Bacteroides fragilis NCTC 9343]
gi|60492455|emb|CAH07225.1| mobilisation protein C [Bacteroides fragilis NCTC 9343]
Length = 534
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 112/458 (24%), Positives = 204/458 (44%), Gaps = 51/458 (11%)
Query: 205 IVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLLNHPDGYKVKPKF 264
+V G GSGK+ ++ +++ I GF+ +IYDFK D + AYN L GY KF
Sbjct: 110 LVYGGAGSGKTKSIGKWLLEEYIRLGFAGFIYDFKDVDYTQTAYN--LTKKYGYP--HKF 165
Query: 265 YVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTWVQKQGDFFVESPIILFA 324
Y ++FD P RS+R NP+ ++D T+ + ++L L +KQ ++ IL
Sbjct: 166 YYVSFDKPERSYRFNPL--KVVKDRTELMQLMEDVLLALLPKG-EKQNEWVAGGLGILRG 222
Query: 325 SIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSYPELENYLSPFMDA-WLGGAAEQ 383
+ + ++CT PH + F+ + S +L +L + A + GA +
Sbjct: 223 VAFRFWDEFP--EYCTLPHIMAFI---------MTASTRQLSIFLQQNLVAEMMAGAYLK 271
Query: 384 LMGQIASAKIPLSRMIS--------PQLYWVMSDSEFTLDINNPEEPKILCVGNNPDRQN 435
G + LS + + ++ +++S +F ++ +PE+PK+ + NN + +
Sbjct: 272 AEGSEKTQASYLSTLCNNLSTISQNEEIAYILSGDDFDFNLIDPEDPKLFAISNNFSKNS 331
Query: 436 IYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATARSNKVAVCLGFQD 495
+Y +G+ S + + + +DE+ T+ K + L + R KV L Q
Sbjct: 332 VYAPVIGMLMSISTRQFTMQNKVPFVYFLDEMTTVNIKNFETLPSVLREYKVGFVLLTQS 391
Query: 496 FSQLVRDYGDKEAKVVMNTVGNIFSGQVVG-ETAKTLSERFGKVLQKRQSISINR----Q 550
++L YG + V G F G+ E K + FGK ++R+S S +
Sbjct: 392 GAKLEALYGKLDRSSVEANFGIQFFGRTKDVEALKYYPQMFGKEEKERKSRSTGKSGSSS 451
Query: 551 DVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIFHCEIVVDAEKVKREES 610
+ S +I++Q + + + L G F+GS + R + F V+ E +++E
Sbjct: 452 NRSVTISSQKEDIYQGRDFADLEPGEFIGSAT-----RANVRYFK---VMLGEFKEKDEK 503
Query: 611 AYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQI 648
+ V+ E G + N+ RI EEV+ +
Sbjct: 504 PLPDVRVL-----EPGE------ISGNFARILEEVRSL 530
>gi|156859276|gb|EDO52707.1| hypothetical protein BACUNI_03502 [Bacteroides uniformis ATCC
8492]
Length = 94
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 47/59 (79%), Positives = 55/59 (93%)
Query: 4 QEDDLRALAKIMDFLRAVSIILVVMNVYWFCYEAIRLWGVNIGVVDKILLNFDRTAGLF 62
QEDDLRAL KIMDFLRAVSIIL +MNVYW+CYEA+R+WGV IGVVD+IL+NF+RT G+F
Sbjct: 3 QEDDLRALGKIMDFLRAVSIILAIMNVYWYCYEAMRMWGVTIGVVDRILINFNRTGGVF 61
>gi|4164093|gb|AAD05339.1| BfmC [Bacteroides fragilis]
Length = 534
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 98/392 (25%), Positives = 179/392 (45%), Gaps = 32/392 (8%)
Query: 205 IVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLLNHPDGYKVKPKF 264
+V G GSGK+ ++ +++ I GF+ +IYDFK D + AYN L GY KF
Sbjct: 110 LVYGGAGSGKTKSIGKWLLEEYIRLGFAGFIYDFKDVDYTQTAYN--LTKKYGYP--HKF 165
Query: 265 YVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTWVQKQGDFFVESPIILFA 324
Y ++FD P RS+R NP+ ++D T+ + ++L L +KQ ++ IL
Sbjct: 166 YYVSFDKPERSYRFNPL--KVVKDRTELMQLMEDVLLALLPKG-EKQNEWVAGGLGILRG 222
Query: 325 SIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSYPELENYLSPFMDA-WLGGAAEQ 383
+ + ++CT PH + F+ + S +L +L + A + GA +
Sbjct: 223 VAFRFWDEFP--EYCTLPHIMAFI---------MTASTRQLSIFLQQNLVAEMMAGAYLK 271
Query: 384 LMGQIASAKIPLSRMIS--------PQLYWVMSDSEFTLDINNPEEPKILCVGNNPDRQN 435
G + LS + + ++ +++S +F ++ +PE+PK+ + NN + +
Sbjct: 272 AEGSEKTQASYLSTLCNNLSTISQNEEIAYILSGDDFDFNLIDPEDPKLFAISNNFSKNS 331
Query: 436 IYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATARSNKVAVCLGFQD 495
+Y +G+ S + + + +DE+ T+ K + L + R KV L Q
Sbjct: 332 VYAPVIGMLMSISTRQFTMQNKVPFVYFLDEMTTVNIKNFETLPSVLREYKVGFVLLTQS 391
Query: 496 FSQLVRDYGDKEAKVVMNTVGNIFSGQVVG-ETAKTLSERFGKVLQKRQSISINR----Q 550
++L YG + V G F G+ E K + FGK ++R+S S +
Sbjct: 392 GAKLEALYGKLDRASVEANFGIQFFGRTKDVEALKYYPQMFGKEEKERKSRSTGKSGSSS 451
Query: 551 DVSTSINTQMDALIPPSKISGLTQGMFVGSVS 582
+ S +I++Q + + + L G F+GS +
Sbjct: 452 NRSVTISSQKEDIYQGRDFADLEPGEFIGSAT 483
>gi|150003538|ref|YP_001298282.1| mobilisation protein C [Bacteroides vulgatus ATCC 8482]
gi|149931962|gb|ABR38660.1| mobilisation protein C [Bacteroides vulgatus ATCC 8482]
Length = 534
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 94/392 (23%), Positives = 174/392 (44%), Gaps = 32/392 (8%)
Query: 205 IVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLLNHPDGYKVKPKF 264
+V G GSGK+ ++ + + + GF+ +IYDFK D + AYN + H + KF
Sbjct: 110 LVYGGAGSGKTKSIGKWLLSEYMRLGFAGFIYDFKDTDYTRTAYNLIKRH----RYPHKF 165
Query: 265 YVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTWVQKQGDFFVESPIILFA 324
Y ++FD P RS+R NP+ + D T+ + ++L L ++Q ++ IL
Sbjct: 166 YYVSFDRPERSYRFNPL--KVVRDRTELIQLMEDVLLALLPK-KEQQNEWVAGGLGILRG 222
Query: 325 SIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSYPELENYLSP-FMDAWLGGAAEQ 383
+ + + CT PH + F+ + S +L +L + L GA +
Sbjct: 223 VAFRFWDEFP--EHCTLPHILAFI---------MTASARQLSLFLQQNLVSEMLAGAYLK 271
Query: 384 LMGQIASAKIPLSRMIS--------PQLYWVMSDSEFTLDINNPEEPKILCVGNNPDRQN 435
G + LS + + ++ +V+S +F ++ +PE PK+ + NN + +
Sbjct: 272 AEGSEKTQASYLSTLCNNLATVSQNEEIAYVLSGDDFDFNLIDPENPKLFAISNNFSKNS 331
Query: 436 IYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATARSNKVAVCLGFQD 495
+Y +G+ + + + + +DE+ T+ K + L + R A L Q
Sbjct: 332 VYAPVIGMLMTISSRQFTMRNKVPFVYFLDEMTTVNIKNFETLPSVLREYLCAFVLLTQS 391
Query: 496 FSQLVRDYGDKEAKVVMNTVGNIFSGQVVG-ETAKTLSERFGKVLQKRQSISINRQDVST 554
S++ YG + V GN F G+ E+ K FGK ++R+S S + ST
Sbjct: 392 GSKVENQYGRLDRSSVEANFGNQFFGRTKDVESLKYYPMMFGKEEKERRSRSAGKSGGST 451
Query: 555 ----SINTQMDALIPPSKISGLTQGMFVGSVS 582
++++Q + + + L G F+GS +
Sbjct: 452 NRSVTVSSQKEDIYQGKDFADLEPGEFIGSAT 483
>gi|17233229|ref|NP_490319.1| hypothetical protein alr7213 [Nostoc sp. PCC 7120]
gi|17135751|dbj|BAB78297.1| alr7213 [Nostoc sp. PCC 7120]
Length = 589
Score = 99.0 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 101/382 (26%), Positives = 175/382 (45%), Gaps = 56/382 (14%)
Query: 202 RASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLLNHPDGYKVK 261
R + V+G PGSGK+++ +N I I++GF +YDFKYP + +A D +
Sbjct: 117 RGTAVIGAPGSGKTFSAINPMIYSAIDQGFPCIVYDFKYPSQARVAAYAKYKGYDVHIFA 176
Query: 262 PKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTWV----QKQGDFFVE 317
P F S CNP+ DF++D +DA E+A I +NK + + FF
Sbjct: 177 PGF--------PESEVCNPL--DFLKDSSDA-ETARQISTVINKNFRLLGNSTEDGFFGP 225
Query: 318 SPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIF---PILTSYPELENYLSPFMD 374
S L +I+ K + G+F D+ IL+S ++ ++ ++
Sbjct: 226 SGDQLTQAILMLAKEF--GQFA--------------DVMTCAAILSSEHMVKRLMAASLN 269
Query: 375 AWLGGAAEQLM----------GQIASAKIPLSRMISPQ-LYWVMSDSEFTLDINNPEEPK 423
W+ A QL G +A+A I +R ++ L + + L+I +
Sbjct: 270 PWVKIAFGQLFSSAASEKTVAGIVATASIMFTRFMAKNTLGCFIGKTTLPLEIKGKQ--- 326
Query: 424 ILCVGNNPDRQNIYGAAL-GLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATA 482
++ G + +R++ G + + + I + I KK V +DELP+IY L + +
Sbjct: 327 MIIFGLDRERRDAVGPLMTSILHMTIARNIAKKRKDPLIVALDELPSIYLPDLYRWLNES 386
Query: 483 RSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIF---SGQVVGETAKTLSERFG--K 537
RS +GFQ+ QL ++YG + AK ++ + F G+ E+A+ S G +
Sbjct: 387 RSEGFCGIIGFQNMGQLEKNYGKEVAKAILGACSSKFIFNPGE--NESAQLFSSFLGDEE 444
Query: 538 VLQKRQSISINRQDVSTSINTQ 559
+ K++S S ++ STSI+ Q
Sbjct: 445 IKYKQKSRSSGSKNNSTSISDQ 466
>gi|150006205|ref|YP_001300949.1| mobilisation protein C [Bacteroides vulgatus ATCC 8482]
gi|149934629|gb|ABR41327.1| mobilisation protein C [Bacteroides vulgatus ATCC 8482]
Length = 534
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 85/349 (24%), Positives = 155/349 (44%), Gaps = 28/349 (8%)
Query: 205 IVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLLNHPDGYKVKPKF 264
+V G GSGK+ ++ + + + GF+ +IYDFK D + AYN + H + KF
Sbjct: 110 LVYGEAGSGKTKSIGKWLLSEYMRLGFAGFIYDFKDTDYTRTAYNLIKRH----RYPHKF 165
Query: 265 YVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTWVQKQGDFFVESPIILFA 324
Y ++FD P RS+R NP+ + D T+ + ++L L ++Q ++ IL
Sbjct: 166 YYVSFDRPERSYRFNPL--KVVRDRTELIQLMEDVLLALLPK-KEQQNEWVAGGLGILRG 222
Query: 325 SIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSYPELENYLSP-FMDAWLGGAAEQ 383
+ + + CT PH + F+ + S +L +L + L GA +
Sbjct: 223 VAFRFWDEFP--EHCTLPHILAFI---------MTASARQLSLFLQQNLVSEMLAGAYLK 271
Query: 384 LMGQIASAKIPLSRMIS--------PQLYWVMSDSEFTLDINNPEEPKILCVGNNPDRQN 435
G + LS + + ++ +V+S +F ++ +PE PK+ V NN + +
Sbjct: 272 AEGSEKTQASYLSTLCNNLATISQNEEIAYVLSGDDFDFNLIDPETPKLFAVSNNFSKNS 331
Query: 436 IYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATARSNKVAVCLGFQD 495
+Y + + + + + + + +DE+ T+ K + L + R K A L Q
Sbjct: 332 VYAPVISMLMTISARQFSMQNRVPFVYFLDEMTTVNIKNFETLPSVLREYKAAFILLTQS 391
Query: 496 FSQLVRDYGDKEAKVVMNTVGNIFSGQVVG-ETAKTLSERFGKVLQKRQ 543
++L YG + V GN+F G+ E K FGK ++R+
Sbjct: 392 GAKLENLYGKLDRSSVEANFGNMFLGRTKDVEALKYYPLFFGKEEKERR 440
>gi|75812307|ref|YP_319926.1| transfer complex protein TrsK-like [Anabaena variabilis ATCC 29413]
gi|75705063|gb|ABA24737.1| transfer complex protein TrsK-like [Anabaena variabilis ATCC 29413]
Length = 588
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 100/382 (26%), Positives = 171/382 (44%), Gaps = 56/382 (14%)
Query: 202 RASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLLNHPDGYKVK 261
R + V+G PGSGK+++ +N I I++GF YDFKYP + +A D +
Sbjct: 117 RGTAVIGAPGSGKTFSAINPMIYSAIDQGFPIIAYDFKYPSQAKVAAYAKYKGYDVHIFA 176
Query: 262 PKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTWV----QKQGDFFVE 317
P F S CNP+ DF+ D +DA E+A I +NK + + FF
Sbjct: 177 PGF--------PESEVCNPL--DFLRDSSDA-ETARQISTVINKNFRLLGNSSEDGFFGP 225
Query: 318 SPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIF---PILTSYPELENYLSPFMD 374
S L +II K + + Y D+ IL+S ++ ++ ++
Sbjct: 226 SGDQLTQAIIMLAKEFGD----------------YADVMTCAAILSSEHMVKRLMAASLN 269
Query: 375 AWLGGAAEQLM----------GQIASAKIPLSRMISPQ-LYWVMSDSEFTLDINNPEEPK 423
W+ A QL G +A+A I +R ++ L + + L+I +
Sbjct: 270 PWVKIAFGQLFSSAASEKTVAGIVATASIMFTRFMAKNTLGCFIGKTTLPLEIKGKQ--- 326
Query: 424 ILCVGNNPDRQNIYGAAL-GLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATA 482
++ G + +R++ G + + + I + I K V +DELP+IY L + +
Sbjct: 327 MIIFGLDRERRDAVGPLMTSILHMTIARNIASKRKDPLIVALDELPSIYLPDLYRWLNES 386
Query: 483 RSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIF---SGQVVGETAKTLSERFG--K 537
RS +GFQ+ QL ++YG + AK ++ + F G+ E+A+ S G +
Sbjct: 387 RSEGFCGIIGFQNMGQLEKNYGKEVAKAILGACSSKFIFNPGE--NESAQLFSSFLGDEE 444
Query: 538 VLQKRQSISINRQDVSTSINTQ 559
+ K++S S ++ STSI+ Q
Sbjct: 445 IKYKQKSRSSGSKNNSTSISEQ 466
>gi|23130203|ref|ZP_00112022.1| COG3505: Type IV secretory pathway, VirD4 components [Nostoc
punctiforme PCC 73102]
Length = 588
Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 122/474 (25%), Positives = 207/474 (43%), Gaps = 80/474 (16%)
Query: 202 RASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLLNHPDGYKVK 261
R + V+G PGSGKS++ +N I I++GF +YDFKY L+ IA D +
Sbjct: 124 RGTAVIGAPGSGKSFSAINPMIYSAIDQGFGIVLYDFKYASLAKIASYAKSKGYDVHIFA 183
Query: 262 PKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTWV----QKQGDFFVE 317
P F S CNPI DF+ D +DA E+A + +NK + + FF
Sbjct: 184 PGF--------PESEVCNPI--DFLRDSSDA-ETARQLATVINKNFRLLGNASEDAFFGP 232
Query: 318 SPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIF---PILTSYPELENYLSPFMD 374
+ L +I+ K EF +R DI IL+S +E ++ ++
Sbjct: 233 AGDQLTQAILMLTK--------------EFGDR--ADIMTAAAILSSEKMVERLMAAALN 276
Query: 375 AWL----------GGAAEQLMGQIASAKIPLSR-MISPQLYWVMSDSEFTLDINNPEEPK 423
W+ G+ + + G SA + +R M L + + L++ + +
Sbjct: 277 PWIKIAFGQLFSSAGSEKTVAGIAGSASLMFTRFMARGTLGCFVGKTTLPLEV---KRKQ 333
Query: 424 ILCVGNNPDRQNIYGAAL-GLYNSRIVKLINKKGMLKSSVII--DELPTIYFKGLDNLIA 480
++ G + +R++ + + + + + I KKG +++ DELP+I+ L +
Sbjct: 334 MIIFGLDRERRDAVSPLMTSILHMVVSRSIAKKGKEDGPLVVCLDELPSIFLPDLFKWLN 393
Query: 481 TARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIF---SGQVVGETAKTLSERFG- 536
+RS LG+Q+ QL + YG + +K ++ G F G+ E+A+ S G
Sbjct: 394 ESRSEGFCGILGWQNMGQLEKIYGKEISKAILGACGTKFVFNPGE--EESARLFSAYLGE 451
Query: 537 -KVLQKRQSISINRQDVSTSINTQ--MDALIPPSKISGLTQG--MFVGSVSDNFNE---- 587
++ K++S S STSI+ Q L+ P++ L G +F+ N NE
Sbjct: 452 EEIKYKQKSRSTGGGKASTSISEQERTRKLLEPAQFLKLPPGKCLFINPAYSNKNEGSVP 511
Query: 588 -----RIEQKIFHCEIVVDA--EKVKRE--ESAYKKIPVITNFTDEDGNDRMKE 632
+I + I E D +KV +E + +K P T ED + R+KE
Sbjct: 512 ILKNIKIPKYIIELEQENDTKWDKVIKELARKSTQKKP-----TQEDLDLRVKE 560
>gi|29611508|ref|NP_818961.1| mobilization protein C [Bacteroides thetaiotaomicron VPI-5482]
gi|29335922|gb|AAO45306.1| mobilization protein C [Bacteroides thetaiotaomicron VPI-5482]
Length = 479
Score = 95.9 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 104/415 (25%), Positives = 186/415 (44%), Gaps = 36/415 (8%)
Query: 195 INVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLL-- 252
I +PF +V G SGK+ ++ + Q I+ GF+ ++Y++K DL+ A HL+
Sbjct: 47 ITFADPFDNFLVYGGANSGKTKSIGKPLLSQYIQAGFAGFVYNYKDFDLARTAV-HLVKK 105
Query: 253 -NHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTWVQKQ 311
N+P G + I+F D R+HR NPI P +++ T + ML + K+
Sbjct: 106 HNYPYG------CFQISFTDMERTHRTNPIRPSVVKNET-LFLQLMDDMLTAYQGKDGKR 158
Query: 312 GDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFL-NRRYEDIFPILTSYPELENYLS 370
++F + IL I + Y +FCT PH + F+ + I L +
Sbjct: 159 DEWFNGALGILRGVSIRFYNDYP--QFCTIPHIVNFICSAGTVRITSFLEGKHQSRVLAG 216
Query: 371 PFMDAWLGGAAEQLMGQIASAKIPLSRMIS-PQLYWVMSDSEFTLDINNPEEPKILCVGN 429
F+DA + + ++S LS + + ++ +V+S ++F ++ +PE PK++ V N
Sbjct: 217 AFLDA--KDSPKTQSSYLSSLTNSLSTLANEKKVCYVLSGNDFDFNLIDPECPKLVVVSN 274
Query: 430 NPDRQNIYGAALGLY---NSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATARSNK 486
+N+ + L +SR L NK +DE T + L + R
Sbjct: 275 AYQIENLISPVISLMLSISSRRFTLANKVPFF---YFLDEATTFRIADFEKLPSVLREYL 331
Query: 487 VAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVG-ETAKTLSERFGKVLQKRQSI 545
+ Q +++ + YG + + + GN F G+ E K+ FGK ++RQ +
Sbjct: 332 CSFVFLTQSAAKIEKIYGKYDRSSIESNFGNQFFGRTKDIEALKSYPLVFGK--EERQRV 389
Query: 546 SINR------QDVSTSINTQMDALIPPSKISGLTQGMFVGSVSD----NFNERIE 590
S ++ S +++TQ + + + + L G FVGS + NF+ R E
Sbjct: 390 SKTTGSSRGGENRSRTVSTQKEEIYDTNFFTSLKSGEFVGSAAHSNMRNFHLRFE 444
>gi|150005980|ref|YP_001300724.1| mobilisation protein C [Bacteroides vulgatus ATCC 8482]
gi|149934404|gb|ABR41102.1| mobilisation protein C [Bacteroides vulgatus ATCC 8482]
Length = 542
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 110/471 (23%), Positives = 209/471 (44%), Gaps = 59/471 (12%)
Query: 201 FRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLLNHPDGYKV 260
F +V G GSGK+ ++ ++Q I GF+ +IYDFK D + AYN + H GY
Sbjct: 101 FSNFLVYGGAGSGKTKSIGKPLMEQYIRSGFAGFIYDFKDFDYTRTAYNLIRKH--GYP- 157
Query: 261 KPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTWVQKQGDFFVESPI 320
+FY +NF D R++R NP+ ++D T + ++ L KQ +++ +
Sbjct: 158 -HEFYYVNFTDMNRTYRFNPLDRRNIKDRTMLMQLMEDVLGALMPP-TSKQDEWYTGALG 215
Query: 321 ILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSYPELENYLS-PFMDAWLGG 379
IL + Y + + CT PH + F+ I +L+ +L + A + G
Sbjct: 216 ILNG--VAYRLWDEFPECCTLPHIVNFV---------IKADTGQLQEFLKLNDISAMMAG 264
Query: 380 A---AEQLMGQIASAKIPLSRMISP-----QLYWVMSDSEFTLDINNPEEPKILCVGNNP 431
A AE AS LS ++ + +V++ ++F ++ +PE PK+ + NN
Sbjct: 265 AYLKAEGSEKTQASYVSTLSNYVAKLATNENICYVLTGNDFDFNLIDPEHPKLFAISNNY 324
Query: 432 DRQNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATARSNKVAVCL 491
+++ + + S + + + + I+DE+ T + + L + R A L
Sbjct: 325 ATESVISPVIAMVMSIASRSFSMENRVPFVFILDEMTTFKVRDFEKLPSVLREYGAAFLL 384
Query: 492 GFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVG-ETAKTLSERFGKVLQKRQ----SIS 546
Q ++L + Y + + GNIF G+ E K FGK ++++ S
Sbjct: 385 LTQSGAKLEKLYSKLDRSSIEANFGNIFLGRTQDVEALKYYPLFFGKYEKEKKSTSSGSS 444
Query: 547 INRQDVSTSINTQMDALIPPSKISGLTQGMFVG-----SVSDNFNERIEQKIFHCEIVVD 601
++ S +I+TQ + + + L G F+G ++ +F ++ ++F E
Sbjct: 445 GGGRNSSVTISTQKEEIYESKDFASLEPGEFIGMGNRSNIKGHFRKKF--RLFELE---- 498
Query: 602 AEKVKREESAYKKIPVITNFTDEDGNDRMKETVQANYRRIKEEVKQIVQEE 652
EE +PV+ T+++ +D NY RI +++++++ E
Sbjct: 499 ------EEP----LPVVAFRTEKEISD--------NYTRILKDIERVLGME 531
>gi|23127668|ref|ZP_00109533.1| COG3505: Type IV secretory pathway, VirD4 components [Nostoc
punctiforme PCC 73102]
Length = 579
Score = 92.4 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 98/382 (25%), Positives = 170/382 (44%), Gaps = 56/382 (14%)
Query: 202 RASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLLNHPDGYKVK 261
R + V+G PGSGK+++ +N I I++ F +YDFKYP + +A D +
Sbjct: 117 RGTAVIGAPGSGKTFSAINPMIYSAIDQEFPCIVYDFKYPSQAKVAAYAKYKGYDVHIFA 176
Query: 262 PKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTWV----QKQGDFFVE 317
P F S CNP+ DF+ D +DA ES+ I +NK + + FF
Sbjct: 177 PGF--------PESEVCNPL--DFLRDSSDA-ESSRQISTVINKNFRLLGNSTEDGFFGP 225
Query: 318 SPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIF---PILTSYPELENYLSPFMD 374
S L +I+ K + G+F D+ IL+S ++ ++ ++
Sbjct: 226 SGDQLTQAILMLAKEF--GQFA--------------DVMTCAAILSSEQMVKRLMAASLN 269
Query: 375 AWLGGAAEQLM----------GQIASAKIPLSRMISPQ-LYWVMSDSEFTLDINNPEEPK 423
W+ A QL G +A+A I +R ++ L + + L+I +
Sbjct: 270 PWVKIAFGQLFSSAASEKTVAGIVATASIMFTRFMAKNTLGCFIGKTTLPLEIKGKQ--- 326
Query: 424 ILCVGNNPDRQNIYGAAL-GLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATA 482
++ G + +R++ G + + + I + I + V +DELP+IY L + +
Sbjct: 327 MIIFGLDRERRDAVGPLMTSILHMTIARNIASRRKDPLIVALDELPSIYLPDLYRWLNES 386
Query: 483 RSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIF---SGQVVGETAKTLSERFG--K 537
RS +GFQ+ QL ++YG AK ++ F G+ E+A+ S G +
Sbjct: 387 RSEGFCGIIGFQNMGQLEKNYGKDIAKAILGACSTKFIFNPGE--NESAQLFSSFLGDEE 444
Query: 538 VLQKRQSISINRQDVSTSINTQ 559
+ K++S S ++ STSI+ Q
Sbjct: 445 IKYKQKSRSTGSKNNSTSISDQ 466
>gi|17158675|ref|NP_478186.1| hypothetical protein alr7539 [Nostoc sp. PCC 7120]
gi|17134624|dbj|BAB77182.1| alr7539 [Nostoc sp. PCC 7120]
Length = 608
Score = 89.4 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 118/481 (24%), Positives = 204/481 (42%), Gaps = 88/481 (18%)
Query: 202 RASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLLNHPDGYKVK 261
R + V+G PGSGKS++ +N I I++GF +YDFKY + IA D +
Sbjct: 144 RGTAVIGAPGSGKSFSAINPMIYSAIDQGFGIVLYDFKYASQAKIASYAKSKGYDVHIFA 203
Query: 262 PKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTWV----QKQGDFFVE 317
P F S CNPI DF+ D +DA E+A + +NK + + FF
Sbjct: 204 PGF--------PESEVCNPI--DFLRDSSDA-ETARQLATVINKNFRLLGNASEDAFFGP 252
Query: 318 SPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIF---PILTSYPELENYLSPFMD 374
+ L +I+ K + + HA DI IL+S +E ++ ++
Sbjct: 253 AGDQLTQAILMLTKEFGD-------HA---------DIMTAAAILSSEKMVERLMAAELN 296
Query: 375 AWL----------GGAAEQLMGQIASAKIPLSR-MISPQLYWVMSDSEFTLDINNPEEPK 423
W+ G+ + + G SA + +R M L + + L++ + +
Sbjct: 297 PWIRIAFGQLFSSAGSEKTVAGIAGSASLMFTRFMARGTLGCFVGKTTLPLEV---KRKQ 353
Query: 424 ILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSS-------VIIDELPTIYFKGLD 476
++ G + +R++ A+ + I+ ++ + + K V +DELP+I+ L
Sbjct: 354 MIIFGLDRERRD----AVSPLMTSILHMVVSRSIAKKRKEDGPLVVCLDELPSIFLPDLF 409
Query: 477 NLIATARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIF---SGQVVGETAKTLSE 533
+ +RS LG+Q+ QL + YG + +K ++ G F G+ E+A+ S
Sbjct: 410 RWLNESRSEGFCGILGWQNMGQLEKIYGKEISKAILGACGTKFVFNPGE--EESARLFSA 467
Query: 534 RFG----KVLQKRQSISINRQDVSTSINTQMDALIPPSKISGLTQG--MFVGSVSDNFNE 587
G K QK +S + S S + L P++ L G +F+ N NE
Sbjct: 468 YLGEEEIKYKQKSRSTGGGKSSTSISEQERTRKLFEPAQFLKLPPGKCLFINPAYSNKNE 527
Query: 588 ---------RIEQKIFHCEIVVDA--EKVKRE--ESAYKKIPVITNFTDEDGNDRMKETV 634
+I ++I E DA +K+ +E + +K P T ED + R+KE
Sbjct: 528 GSVPLLKNIKIPKQIIGLEQENDANWDKLIKELARKSTQKKP-----TQEDLDLRVKEVA 582
Query: 635 Q 635
+
Sbjct: 583 R 583
>gi|75812705|ref|YP_320322.1| hypothetical protein Ava_C0044 [Anabaena variabilis ATCC 29413]
gi|75705461|gb|ABA25133.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
Length = 608
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 125/476 (26%), Positives = 206/476 (43%), Gaps = 84/476 (17%)
Query: 202 RASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLLNHPDGYKVK 261
R + V+G PGSGKS++ +N I I++ F +YDFKY + IA D +
Sbjct: 144 RGTAVIGAPGSGKSFSAINPMIYSAIDQDFGIVLYDFKYASQAKIASYAKSKGYDVHIFA 203
Query: 262 PKFYVINFDDPRRSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTWV----QKQGDFFVE 317
P F S CNPI DF+ D +DA E+A + +NK + + FF
Sbjct: 204 PGF--------PESEVCNPI--DFLRDSSDA-ETARQLATVINKNFRLLGNASEDAFFGP 252
Query: 318 SPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIF---PILTSYPELENYLSPFMD 374
+ L +I+ K EF +R DI IL+S +E ++ ++
Sbjct: 253 AGDQLTQAILMLTK--------------EFDDR--ADIMTAAAILSSEKMVERLMAAELN 296
Query: 375 AWL----------GGAAEQLMGQIASAKIPLSR-MISPQLYWVMSDSEFTLDINNPEEPK 423
W+ G+ + + G SA + +R M L + + L++ + +
Sbjct: 297 PWIRIAFGQLFSSAGSEKTVAGIAGSASLMFTRFMARGTLGCFVGKTTLPLEV---KRKQ 353
Query: 424 ILCVGNNPDRQN----IYGAALGLYNSR-IVKLINKKGMLKSSVIIDELPTIYFKGLDNL 478
++ G + +R++ + + L + SR I K + G L V +DELP+I+ L
Sbjct: 354 MIIFGLDRERRDAVSPLMTSILHMVVSRSIAKKRKEDGPL--VVCLDELPSIFLPDLFRW 411
Query: 479 IATARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIF---SGQVVGETAKTLSERF 535
+ +RS LG+Q+ QL + YG + +K ++ G F G+ E+A+ S
Sbjct: 412 LNESRSEGFCGILGWQNMGQLEKIYGKEISKAILGACGTKFVFNPGE--EESARLFSAYL 469
Query: 536 G--KVLQKRQSISINRQDVSTSINTQ--MDALIPPSKISGLTQG--MFVGSVSDNFNE-- 587
G ++ K++S S STSI+ Q L P++ L G +F+ N NE
Sbjct: 470 GEEEIKYKQKSRSTGGGKASTSISEQERTRKLFEPAQFLKLPPGKCLFINPAYSNKNEGS 529
Query: 588 -------RIEQKIFHCEIVVDA--EKVKRE--ESAYKKIPVITNFTDEDGNDRMKE 632
RI + I E DA +K+ +E + +K P T ED + R+KE
Sbjct: 530 VPLLKNIRIPKYIIGLEQENDANWDKLIKELARKSTQKKP-----TQEDLDLRVKE 580
>gi|126660598|ref|ZP_01731701.1| hypothetical protein CY0110_31225 [Cyanothece sp. CCY0110]
gi|126618091|gb|EAZ88857.1| hypothetical protein CY0110_31225 [Cyanothece sp. CCY0110]
Length = 617
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 110/444 (24%), Positives = 198/444 (44%), Gaps = 58/444 (13%)
Query: 183 RFYYRKRWNNGWINVVNPFRASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPD 242
RF +++ + I + + R +V G G+GK+++V++ I+ +++GF +YDFK+P
Sbjct: 115 RFNQQRKVASAPIYIPDIQRGVLVSGAAGTGKTFSVIDPCIRAALDQGFPTLLYDFKFPT 174
Query: 243 LSTIAYNHLLNHPDGYKVKPKFYVINFDDPRRSHRCNPIHPDFMEDITDAYES------- 295
S+ + L GYKV +F+ NF S CN + DF+E+ DA +
Sbjct: 175 QSSRVIAYALKR--GYKV--RFFTPNFP---FSDVCNLL--DFLENEEDAVAAGQLAEVI 225
Query: 296 AYTIMLNLNKT---WVQKQGDFFVESPIILFASII-----WYLKIYQNGKFCTFPHAIEF 347
A I LN N + + + G V+ +L ++ Y + + P +
Sbjct: 226 AKNIDLNANASSDKFFEDAGATLVQGIFLLAKAVAAKCGKQYADLMTCAAILSLPELGKR 285
Query: 348 LN-RRYEDIFPILTSYPELENYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQLYWV 406
L R + FP+ T P L +S + A E I +A+ + +
Sbjct: 286 LGYSREQQQFPVWTMRP-LAQLIS------VASAPETESSIIGTAQRTFEKFLKKDFIGA 338
Query: 407 MS-DSEFTLDINNPEEPKILCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSS---- 461
S DS LD++ +L G + + ++I G + + ++ +I + + +S+
Sbjct: 339 FSDDSTIPLDLDG---KTLLVCGLDRNNRDIVGPLM----AAVIHMIVSRNVSRSTPRPH 391
Query: 462 ---VIIDELPTIYFKGLDNLIATARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGN- 517
V +DELPT+Y L + R + +GFQ+ +QL + YG + AK+++
Sbjct: 392 PLCVFLDELPTLYLPQLYEWLTQNREDGFCGIVGFQNLAQLEKVYGKEVAKIIIGNCATK 451
Query: 518 -IFSGQVVGETAKTLSERFGK--VLQKRQSISINRQDVST-----SINTQMDALIPPSKI 569
IF+ Q V E+A+ S+ G+ +L +S S N S+ S N Q +L S+
Sbjct: 452 FIFNPQEV-ESAEYFSKAIGEFDILYSTKSRSHNSGKQSSGSRSRSENRQKRSLFEVSQF 510
Query: 570 SGLTQGMFVGSVSDNFNERIEQKI 593
L +G V ++ N+ E+ I
Sbjct: 511 MKLGKGQAV-IINPNYQRGDEEYI 533
>gi|23128610|ref|ZP_00110453.1| COG3505: Type IV secretory pathway, VirD4 components [Nostoc
punctiforme PCC 73102]
Length = 587
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 82/363 (22%), Positives = 149/363 (41%), Gaps = 45/363 (12%)
Query: 202 RASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLLNHP--DGYK 259
R +V G PGSGKS++++N I+ I++G +YDFKY + P GY
Sbjct: 120 RGILVCGGPGSGKSFSMINPLIRSVIDQGLPLALYDFKYASQESADSPSKGQAPILAGYA 179
Query: 260 VKPKFYVINFDDP--RRSHRCNPIHPDFMEDITDAYESAYTIMLNLNK-----------T 306
++ + Y + P S NPI DF+ D+ E A + + LN+ +
Sbjct: 180 IE-RGYQVTVLAPGFAESAVANPI--DFLRSNEDS-EMARQLAITLNRNFQLGDQDSGNS 235
Query: 307 WVQKQGDFFVESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSYPELE 366
+ GD V++ + + A Y I P ++ + + F + ++ +
Sbjct: 236 FFTNAGDQLVQA-VFMLAKGTDYPDIMMCQAILGLPKLVKRIEQAENLNFMVREAFAQFV 294
Query: 367 NYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQ-LYWVMSDSEFTLDINNPEEPKIL 425
+ + G+ E + +A SR + P L + LD+ +E +++
Sbjct: 295 S---------VAGSPETAASIVGTASGLFSRFMVPSALAAFCGKTNIPLDL---KERQMV 342
Query: 426 CVGNNPDRQNIYGAAL-GLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATARS 484
G N +++++ L + + + + + K + IDELPT+Y L + + R
Sbjct: 343 IFGMNKEKRDVIAPLLVSILHLLVSRNVANKRTCPLVLGIDELPTLYLPALVDWLNQNRE 402
Query: 485 NKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSG----QVVGETAKTLSERFGKVLQ 540
+ + LG Q+ S L+ YG+ NT IF G +ERF K L
Sbjct: 403 DGLISILGLQNLSMLIESYGE-------NTTNAIFGGCATKAFFNPQDDVAAERFSKFLG 455
Query: 541 KRQ 543
+ +
Sbjct: 456 EEE 458
>gi|126660594|ref|ZP_01731698.1| transfer complex protein TrsK-like [Cyanothece sp. CCY0110]
gi|126618139|gb|EAZ88904.1| transfer complex protein TrsK-like [Cyanothece sp. CCY0110]
Length = 580
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 95/400 (23%), Positives = 166/400 (41%), Gaps = 54/400 (13%)
Query: 202 RASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLLNHPDGYKVK 261
R++++LG SGK++ +N I++G+ ++YDFKYPD ++I + +
Sbjct: 116 RSALILGAASSGKTFTFINPIGMSCIDRGYPIFMYDFKYPDQTSILATY---------AR 166
Query: 262 PKFYVINFDDP--RRSHRCNPIHPDFMEDITDAY-ESAYTIMLNLNKTWVQKQGD----- 313
K Y ++ P S NPI +F++D T S + +LN N +KQG
Sbjct: 167 AKGYQVDILAPGYAESGVLNPI-TEFIQDATSGLAASQLSEVLNAN---FKKQGSSQSED 222
Query: 314 -FF------VESPIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSYPELE 366
FF + +L A + Y + K + I L RR IL E+
Sbjct: 223 GFFGPSGNQLTKATLLLARTMKYPDLITCAKILS----ISNLARR------ILKKKKEMN 272
Query: 367 NY-LSPFMDAWLGGAAEQLMGQIAS-AKIPLSRMISPQLYWVMSDSEFTLDINNPEEPKI 424
+ L F ++E+ I S A++ +R I P+L V+ T ++
Sbjct: 273 PWILDAFGQFTSSASSEKTEASIQSTAQLMFNRFIVPELLSVLCGK--TTIPTTLTGKRM 330
Query: 425 LCVGNNPDRQNIYGAALGLYNSRIVKLINKKGMLKSS----VIIDELPTIYFKGLDNLIA 480
L +G + ++++ L+ + I +++K + ++ DE+PTIY L
Sbjct: 331 LVLGLDQSKRDVLAP---LFAALINMIVDKNMAMDRKDPFVLLADEVPTIYIPMLKKWPN 387
Query: 481 TARSNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVG-----NIFSGQVVGETAKTLSERF 535
RS LG Q+ +QL YG A+ ++ N + AK L E+
Sbjct: 388 EHRSKGFCGILGVQNMTQLEEMYGKVGARNIIGACATRAYMNPQDIETAEWIAKALPEKE 447
Query: 536 GKVLQKRQSISINRQDVSTSINTQMDALIPPSKISGLTQG 575
+ K +S+S + S S + L+ +KI + G
Sbjct: 448 VVLKHKNKSVSSGKTTRSFSEEVKTKPLMSAAKIGQMQTG 487
>gi|17227411|ref|NP_478462.1| hypothetical protein all8037 [Nostoc sp. PCC 7120]
gi|17134810|dbj|BAB77367.1| all8037 [Nostoc sp. PCC 7120]
Length = 590
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 85/382 (22%), Positives = 159/382 (41%), Gaps = 44/382 (11%)
Query: 202 RASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLLNHPD--GYK 259
R +V G+ GSGK+++++N I+ I++G IYD+KY + P GY
Sbjct: 122 RGILVSGSGGSGKTFSLINPLIRSAIDQGLPIIIYDYKYCHQESEKAEAKGQAPKLAGYA 181
Query: 260 VKPKFYVINFDDP--RRSHRCNPIHPDFMEDITDAYESAYTIMLNLNKTWVQKQGD---- 313
+ + Y + P S NP+ DF+ TDA E A + + LN+ + GD
Sbjct: 182 AE-RGYEVTILSPGFPESGVANPL--DFLRSPTDA-EMARQLAIVLNRNFKLTSGDSSDS 237
Query: 314 -FFVES------PIILFASIIWYLKIYQNGKFCTFPHAIEFLNRRYEDIFPILTSYPELE 366
FF + I + A + I + + P I+ + + D+ P + +
Sbjct: 238 GFFANAGDQLAQAIFMLARGTSFPDIMMCHQLLSLPRLIDRIQQ--ADLNPWVKV--AFD 293
Query: 367 NYLSPFMDAWLGGAAEQLMGQIASAKIPLSRMISPQ-LYWVMSDSEFTLDINNPEEPKIL 425
+LS + G+ E + + +R ++P L + LD+ K++
Sbjct: 294 QFLS------VAGSPETASSIVGTTSGLFTRFMTPSTLSAFCGTTNIPLDLTG---RKMV 344
Query: 426 CVGNNPDRQNIYGAAL-GLYNSRIVKLINKKGMLKSSVIIDELPTIYFKGLDNLIATARS 484
G + +++++ L + + + + + KK + +DELPT+Y L + + R
Sbjct: 345 IFGMDKEKRDVIAPLLVSILHLLVSRNVAKKRTEPLVLALDELPTLYLPALVDWLNQNRE 404
Query: 485 NKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVL----- 539
+ + LGFQ+ SQL + Y ++ A + G + +RF L
Sbjct: 405 DGLVSILGFQNISQLEKAYSEEVANAIF---GGCATKAFFNPQDDVAGQRFSNFLGDEQI 461
Query: 540 --QKRQSISINRQDVSTSINTQ 559
++R S + STS++ Q
Sbjct: 462 KHKERSRTSGGKGGASTSLSEQ 483
>gi|150004656|ref|YP_001299400.1| putative transmembrane mobilization protein, putative TraG
[Bacteroides vulgatus ATCC 8482]
gi|149933080|gb|ABR39778.1| putative transmembrane mobilization protein, putative TraG
[Bacteroides vulgatus ATCC 8482]
Length = 45
Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/45 (68%), Positives = 35/45 (77%)
Query: 48 VDKILLNFDRTAGLFHSILYTKLFSVLLLALSCLGTKGVKGEKIT 92
+DKIL NF RT GLF S+LYTKLF VL L LSC+G KGVK +IT
Sbjct: 1 MDKILSNFQRTTGLFSSLLYTKLFCVLFLGLSCMGNKGVKKHEIT 45
>gi|53687850|ref|ZP_00345455.1| COG3505: Type IV secretory pathway, VirD4 components [Nostoc
punctiforme PCC 73102]
Length = 617
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 88/383 (22%), Positives = 155/383 (40%), Gaps = 46/383 (12%)
Query: 202 RASIVLGTPGSGKSYAVVNNFIKQQIEKGFSQYIYDFKYPDLSTIAYNHLLNHPD--GYK 259
R +V G GSGK+++++N ++ I++G +YDFKY + + P GY
Sbjct: 150 RGILVCGGAGSGKTFSMINPMVRSAIDQGLPIILYDFKYSHQESATADAKGQAPKLAGYA 209
Query: 260 VKPKFYVINFDDPRRSHRC--NPIHPDFMEDITDAYESAYTIMLNLNKTWVQKQGDFFVE 317
+ Y ++ P C NP+ DF+ +DA E A + + LN+ + GD ++
Sbjct: 210 AM-RGYEVSILSPGFPESCVANPL--DFLRSESDA-EMARQLAIVLNRNFKLTSGD-ALD 264
Query: 318 SPIILFASIIWYLKIYQNGKFCTFP-----HAIEFLNRRYEDIFPILTSYPELENYLSPF 372
S A I+ + FP HAI L + + I L ++
Sbjct: 265 SGFFANAGDQLAQAIFMLARGTCFPDIMMCHAILSLPKLIDRI-----QQASLNPWVKVA 319
Query: 373 MDAWL--GGAAEQLMGQIASAKIPLSRMISPQ-LYWVMSDSEFTLDINNPEEPKILCVGN 429
D +L G+ E + + +R ++P L + LD+ K++ G
Sbjct: 320 FDQFLSVAGSPETAASIVGTTSGLFTRFMTPSTLSGFCGQTNIPLDLKG---RKMVVFGM 376
Query: 430 NPDRQNIYG----AALGLYNSRIVKLINKKGMLKSSVI--IDELPTIYFKGLDNLIATAR 483
+ +++++ + L L SR N G ++ +DELPT+Y L + + R
Sbjct: 377 DKEKRDVIAPLLVSILHLLCSR-----NLAGKRTEPLVLALDELPTLYLPALVDWLNQNR 431
Query: 484 SNKVAVCLGFQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVVGETAKTLSERFGKVL---- 539
+ + LG Q+ SQL + Y + + G + +ERF L
Sbjct: 432 EDGLICLLGLQNLSQLEKAYSKETTNAIF---GGCATKAFFNPQDDVAAERFSNFLGDEQ 488
Query: 540 ---QKRQSISINRQDVSTSINTQ 559
++R S + STSI+ Q
Sbjct: 489 IKHRERSRSSGGKGGASTSISEQ 511
>gi|89893601|ref|YP_517088.1| hypothetical protein DSY0855 [Desulfitobacterium hafniense Y51]
gi|89333049|dbj|BAE82644.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 606
Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 8/164 (4%)
Query: 434 QNIYGAALGLYNSRIVKLINKKGMLKSSVIIDELPTI-YFKGLDNLIATARSNKVAVCLG 492
Q +Y L + + R KL N+ M +DE+ TI + + + + +RS +V++
Sbjct: 369 QQLYREVLVVADERGGKLPNRVMMF-----LDEIGTIPKIESAEMMFSASRSRRVSIVAI 423
Query: 493 FQDFSQLVRDYGDKEAKVVMNTVGNIFSGQVV--GETAKTLSERFGKVLQKRQSISINRQ 550
Q F+QL ++YG + A ++++ + G E+A+ LS+ G +IS +
Sbjct: 424 IQSFAQLEKNYGREGAAIIIDNCQDTLFGGFAPNSESAQILSKAMGNKTVLSGAISRGKN 483
Query: 551 DVSTSINTQMDALIPPSKISGLTQGMFVGSVSDNFNERIEQKIF 594
D S S+ +L+ P ++ + +G F+ + + + R + K+F
Sbjct: 484 DPSQSLQMIERSLMTPDELKSMPKGHFIVTKTGAYPMRTQLKLF 527
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.322 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,524,794,157
Number of Sequences: 5470121
Number of extensions: 110710730
Number of successful extensions: 301481
Number of sequences better than 1.0e-05: 56
Number of HSP's better than 0.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 301348
Number of HSP's gapped (non-prelim): 66
length of query: 672
length of database: 1,894,087,724
effective HSP length: 140
effective length of query: 532
effective length of database: 1,128,270,784
effective search space: 600240057088
effective search space used: 600240057088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 133 (55.8 bits)