R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|10177064|dbj|BAB10506.1| (AB005238) gb|AAF26109.1~gene_id:MKP11.4~similar
to unknown protein [Arabidopsis thaliana]
Length = 130
Frame 2 hits (HSPs): _________________________________________________
__________________________________________________
Database sequence: | | | | 130
0 50 100
Plus Strand HSPs:
Score = 599 (210.9 bits), Expect = 2.5e-57, P = 2.5e-57
Identities = 112/127 (88%), Positives = 123/127 (96%), Frame = +2
Query: 11 MALEWVVLGYVAAAEAIMVILLTIPGLEALRKGLIAVTRNLLKPFLSVVPFCLFLFMDIY 190
MALEWVVLGY AAAEAIMVILLT+PGL+ALRKGL+AVTRNLLKPFLS++PFCLFL MDIY
Sbjct: 1 MALEWVVLGYAAAAEAIMVILLTMPGLDALRKGLVAVTRNLLKPFLSIIPFCLFLLMDIY 60
Query: 191 WKYETRPSCEGXSCTPSEHLRHQKSIMKSQRNALLIAAALLFYWLLYSVTNLVVRIDHLN 370
WKYETRPSC+G SCTPSEHLRHQKSIMKSQRNALLIA+AL+FYW+LYSVTNLVVRI+ LN
Sbjct: 61 WKYETRPSCDGDSCTPSEHLRHQKSIMKSQRNALLIASALVFYWILYSVTNLVVRIEQLN 120
Query: 371 QRLERLK 391
QR+ERLK
Sbjct: 121 QRVERLK 127
>gi|6714421|gb|AAF26109.1|AC012328_12 (AC012328) unknown protein [Arabidopsis
thaliana]
Length = 130
Frame 2 hits (HSPs): _________________________________________________
__________________________________________________
Database sequence: | | | | 130
0 50 100
Plus Strand HSPs:
Score = 592 (208.4 bits), Expect = 1.4e-56, P = 1.4e-56
Identities = 109/127 (85%), Positives = 122/127 (96%), Frame = +2
Query: 11 MALEWVVLGYVAAAEAIMVILLTIPGLEALRKGLIAVTRNLLKPFLSVVPFCLFLFMDIY 190
MALEWVVLGY AAAEAIMV+LLT+PGL+ LRKGL+AVTRNLLKPFLS+VPFCLFL MDIY
Sbjct: 1 MALEWVVLGYAAAAEAIMVVLLTMPGLDGLRKGLVAVTRNLLKPFLSIVPFCLFLLMDIY 60
Query: 191 WKYETRPSCEGXSCTPSEHLRHQKSIMKSQRNALLIAAALLFYWLLYSVTNLVVRIDHLN 370
WKYET PSC+G SCTPSEHLRHQKS+MKSQRNALLIAAAL+FYW+LYSVTNLVV+I+HLN
Sbjct: 61 WKYETMPSCDGDSCTPSEHLRHQKSMMKSQRNALLIAAALVFYWILYSVTNLVVKIEHLN 120
Query: 371 QRLERLK 391
QR+ERL+
Sbjct: 121 QRIERLR 127
>gi|9294591|dbj|BAB02872.1| (AB026646) gb|AAF26109.1~gene_id:MIG5.8~similar to
unknown protein [Arabidopsis thaliana]
Length = 129
Frame 2 hits (HSPs): _________________________________________________
__________________________________________________
Database sequence: | | | | 129
0 50 100
Plus Strand HSPs:
Score = 265 (93.3 bits), Expect = 6.2e-22, P = 6.2e-22
Identities = 50/127 (39%), Positives = 77/127 (60%), Frame = +2
Query: 11 MALEWVVLGYVAAAEAIMVILLTIPGLEALRKGLIAVTRNLLKPFLSVVPFCLFLFMDIY 190
MAL+W++L YV AAE + ++LT+P L+K ++++ +L P S+V F F +DIY
Sbjct: 1 MALQWLILSYVVAAEVAIAVILTLPYPMLLKKRIVSLISLILNPAASIVAFAGFQLLDIY 60
Query: 191 WKYETRPSCEGXSCTPSEHLRHQKSIMKSQRNALLIAAALLFYWLLYSVTNLVVRIDHLN 370
WK E R C CT +E RH+KS+ K+QRN +L AA +L YW ++ + ++ L
Sbjct: 61 WKNEHRLLCSSEVCTTTERDRHEKSVYKAQRNGVLCAAGILLYWCIFRICKYHKDLERLE 120
Query: 371 QRLERLK 391
Q +R K
Sbjct: 121 QLEKRYK 127
>gi|8778685|gb|AAF79693.1|AC020889_1 (AC020889) T1N15.5 [Arabidopsis thaliana]
Length = 90
Frame 2 hits (HSPs): ________________________________________________
__________________________________________________
Database sequence: | | | | | | 90
0 20 40 60 80
Plus Strand HSPs:
Score = 190 (66.9 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 35/86 (40%), Positives = 55/86 (63%), Frame = +2
Query: 11 MALEWVVLGYVAAAEAIMVILLTIPGLEALRKGLIAVTRNLLKPFLSVVPFCLFLFMDIY 190
MAL+W++L YV A E ++ ++LT+P L+K ++ + +L+P S+V F F +DIY
Sbjct: 1 MALQWLILSYVVAVEVVITLVLTLPYPMLLKKRVVQLVSLILQPAASIVAFAGFQLLDIY 60
Query: 191 WKYETRPSCEGXSCTPSEHLRHQKSI 268
WK E R SC CT +E R++KS+
Sbjct: 61 WKAEHRLSCSSEVCTATERDRYEKSV 86
>gi|3983573|gb|AAC83971.1| (AC004839) similar to IgD B-cell receptor-associated
protein (BAP); similar to S46997 (PID:g1085495) [Homo sapiens]
Length = 241
Frame 2 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | | | 241
0 50 100 150 200
Plus Strand HSPs:
Score = 98 (34.5 bits), Expect = 0.044, P = 0.043
Identities = 39/131 (29%), Positives = 63/131 (48%), Frame = +2
Query: 11 MALEWVVLGYVAAAEAIMVILLTIPGLEALR--K-------GLIAVTRNLLKPFLSVVPF 163
M L+W + AE ++++ +P + R K G IA N K FL+++
Sbjct: 1 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWN--KAFLTIIIL 58
Query: 164 CLFLFMDIYW---KYETRPSCEGXSCTPSEHLRH-QKSIMKSQRNALLIAAALLFYWLLY 331
+ LF+D KY + + E S + + H Q + +SQRN L I+ LF+WL+
Sbjct: 59 LIVLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRN-LYISGFSLFFWLV- 116
Query: 332 SVTNLVVRIDHLNQRL 379
+ LV I L + L
Sbjct: 117 -LRRLVTLITQLAKEL 131
>gi|8247310|emb|CAB92936.1| (AJ290927) hypothetical protein [Plasmodium
falciparum]
Length = 98
Frame 3 hits (HSPs): ____________________________________
__________________________________________________
Database sequence: | | | | | | 98
0 20 40 60 80
Plus Strand HSPs:
Score = 76 (26.8 bits), Expect = 0.14, P = 0.13
Identities = 19/42 (45%), Positives = 29/42 (69%), Frame = +3
Query: 261 NLS*RANATPSSSPPHSSSTGSSTPSPTSSSGSTT*TSVSNA 386
N S + ++ SSSP SSS+ SS+PS +SSS S++ S S++
Sbjct: 9 NSSSHSPSSSSSSPSSSSSSSSSSPSASSSSSSSSPASSSSS 50
Score = 76 (26.8 bits), Expect = 0.14, P = 0.13
Identities = 22/56 (39%), Positives = 34/56 (60%), Frame = +3
Query: 276 ANATPSSSPPHSSSTGSSTPSPTSSSGSTT*TSVSNA*KNRD*DFTLADKSVNQSL 443
++++ SSSP SSS+ SS+P+ +SSS S+T NA ++ D L K N+ L
Sbjct: 25 SSSSSSSSPSASSSSSSSSPASSSSSPSSTSDDSKNASLDKI-DEELQKKKKNEKL 79
>gi|6671620 ref|NP_031556.1| B-cell receptor-associated protein 29 [Mus
musculus] >gi|1085495|pir||S46997 B-cell receptor associated
protein BAP 29 - mouse >gi|541730|emb|CAA55351.1| (X78684) IgD
B-cell receptor-associated protein (BAP) 29 [Mus musculus]
Length = 240
Frame 2 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | | 240
0 50 100 150 200
Plus Strand HSPs:
Score = 92 (32.4 bits), Expect = 0.24, P = 0.21
Identities = 39/131 (29%), Positives = 61/131 (46%), Frame = +2
Query: 11 MALEWVVLGYVAAAEAIMVILLTIPGLEALR--K-------GLIAVTRNLLKPFLSVVPF 163
M ++W + AE +++L +P + R K G IA N K FL+++
Sbjct: 1 MTIQWAAVASFLYAEIGLILLFCLPFIPPQRWQKIFSFSVWGKIASFWN--KAFLTIIIL 58
Query: 164 CLFLFMDIYW---KYETRPSCEGXSCT-PSEHLRHQKSIMKSQRNALLIAAALLFYWLLY 331
+ LF+D KY + E S PS Q + +SQRN L I+ LF+WL+
Sbjct: 59 LIILFLDAVREVRKYSSTNVVEKNSAIRPSAFEHTQMKLFRSQRN-LYISGFSLFFWLV- 116
Query: 332 SVTNLVVRIDHLNQRL 379
+ LV I L + +
Sbjct: 117 -LRRLVTLITQLAKEI 131
>gi|9994199 ref|NP_061332.1| B-cell receptor-associated protein BAP29 [Homo
sapiens] >gi|6563272|gb|AAF17230.1|AF126020_1 (AF126020) B-cell
receptor-associated protein BAP29 [Homo sapiens]
Length = 242
Frame 2 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | | | 242
0 50 100 150 200
Plus Strand HSPs:
Score = 92 (32.4 bits), Expect = 0.24, P = 0.22
Identities = 36/128 (28%), Positives = 62/128 (48%), Frame = +2
Query: 11 MALEWVVLGYVAAAEAIMVI---LLTIPGLEALRK-------GLIAVTRNLLKPFLSVVP 160
M L+W + AE +++ LL IP + +K G IA N K FL+++
Sbjct: 1 MTLQWAAVATFLYAEIGLILIFCLLFIPP-QRWQKIFSFNVWGKIATFWN--KAFLTIII 57
Query: 161 FCLFLFMDIYW---KYETRPSCEGXSCTPSEHLRH-QKSIMKSQRNALLIAAALLFYWL- 325
+ LF+D KY + + E S + + H Q + +SQRN +++ LF+WL
Sbjct: 58 LLIVLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLSILSGFSLFFWLV 117
Query: 326 LYSVTNLVVRI 358
L + L+ ++
Sbjct: 118 LRRLVTLITQL 128
>gi|10727639|gb|AAG22283.1| (AE003826) CG18807 gene product [Drosophila
melanogaster]
Length = 94
Frame 1 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | | | 94
0 20 40 60 80
Plus Strand HSPs:
Score = 70 (24.6 bits), Expect = 0.70, P = 0.50
Identities = 20/48 (41%), Positives = 20/48 (41%), Frame = +1
Query: 235 PFRAPSPPEIYHEEP-TQRPPHRRRTPLLLAPLLRHQPRRQDRPLEPAS 378
P R P PP H P RPPH R P P H PR P P S
Sbjct: 34 PPRPPQPPRPPHPPPHPPRPPHPPRPPH--PPRPPHPPRPPHPPPHPPS 80
Score = 57 (20.1 bits), Expect = 0.74, Sum P(2) = 0.52
Identities = 14/27 (51%), Positives = 14/27 (51%), Frame = +1
Query: 232 HPFRAPSPPEIYHEEPTQRPPHRRRTP 312
HP R P PP H P RPPH R P
Sbjct: 49 HPPRPPHPPRPPHP-P--RPPHPPRPP 72
Score = 50 (17.6 bits), Expect = 0.74, Sum P(2) = 0.52
Identities = 16/42 (38%), Positives = 18/42 (42%), Frame = +1
Query: 7 SDGARVGCARVRRGRRGHNGYSPHHPGPGS-SPKGSDRGDPEP 132
SD A G R RRG+R Y P+ P P P P P
Sbjct: 9 SDLASGGIGR-RRGQRRQPFYRPYQPPPRPPQPPRPPHPPPHP 50
>gi|11526428 ref|XP_004454.1| H2B histone family, member D [Homo sapiens]
Length = 88
Frame 3 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | | | 88
0 20 40 60 80
Plus Strand HSPs:
Score = 69 (24.3 bits), Expect = 0.91, P = 0.60
Identities = 26/73 (35%), Positives = 36/73 (49%), Frame = +3
Query: 72 SSPSR--AWKLSERV*SR*PGTF*SRSSRWCLSACSFSWTYIGSTKPGLAVRXIPA-PLP 242
+SP+R AW+++ PG RS R C C SW ST+ A R P+ P+P
Sbjct: 6 ASPARLPAWRITTSARPSPPG----RSRRPCACCCQGSWP---STRCRRAPRPSPSTPVP 58
Query: 243 STFATRNLS*RANATP 290
S A R ++ TP
Sbjct: 59 SEPAHRGTFGQSRPTP 74
>gi|940753|emb|CAA59887.1| (X85875) invasive associated protein [Listeria
monocytogenes]
Length = 88
Frame 3 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | | | 88
0 20 40 60 80
Plus Strand HSPs:
Score = 68 (23.9 bits), Expect = 1.2, P = 0.69
Identities = 20/57 (35%), Positives = 35/57 (61%), Frame = +3
Query: 228 PAPLPSTFATRNLS*RANATPSSSPPHSSSTGSSTPSPTSSSGSTT*TSV-SNA*KNR 398
PAP PST N + AN T +++ ++++T ++TPS +++ S T T+ SN N+
Sbjct: 14 PAPAPST----NTN--ANKTNTNTNTNTNNTNTNTPSKNTNTNSNTNTNTNSNTNANQ 65
>gi|3319680|emb|CAA76809.1| (Y17614) N8 protein [Medicago truncatula]
Length = 103
Frame 1 hits (HSPs): _____________________
__________________________________________________
Database sequence: | | | | | | | 103
0 20 40 60 80 100
Plus Strand HSPs:
Score = 73 (25.7 bits), Expect = 1.3, P = 0.72
Identities = 16/41 (39%), Positives = 19/41 (46%), Frame = +1
Query: 253 PPEIYHEEPTQRPPHRR----RTPLLLAPLLRHQPRRQDRP 363
PP IYH P PPH + TPL P ++ R RP
Sbjct: 42 PPPIYHHPPFHPPPHVKPPVYETPLAKVPQMKKPTRYNTRP 82
>gi|940755|emb|CAA59922.1| (X85939) invasive associated protein [Listeria
monocytogenes]
Length = 90
Frame 3 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | | | 90
0 20 40 60 80
Plus Strand HSPs:
Score = 67 (23.6 bits), Expect = 1.5, P = 0.78
Identities = 19/57 (33%), Positives = 34/57 (59%), Frame = +3
Query: 228 PAPLPSTFATRNLS*RANATPSSSPPHSSSTGSSTPSPTSSSGSTT*TSV-SNA*KNR 398
PAP PST N + N T +++ ++++T ++TPS +++ S T T+ SN N+
Sbjct: 14 PAPAPSTNTNAN---KTN-TNTNTNTNTNNTNTNTPSKNTNTNSNTNTNTNSNTNANQ 67
>gi|483238|pir||E48338 hypothetical protein orf71 - equine herpesvirus 4
(strain 405/76) (fragment) >gi|330934|gb|AAA46104.1| (M89634)
glycoprotein J [Equine herpesvirus 4]
Length = 116
Frame 3 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | 116
0 50 100
Plus Strand HSPs:
Score = 75 (26.4 bits), Expect = 2.7, P = 0.93
Identities = 21/55 (38%), Positives = 33/55 (60%), Frame = +3
Query: 228 PAPLPSTFATRNLS*RANATPSSS--PPHSSSTGSSTPSPTSSSGSTT*TSVSNA 386
P P+T +++ S + TPS+S P SSST S+T + S++ S+T T+ S A
Sbjct: 57 PTTGPTTTSSQTSSSNSTQTPSTSQTPTTSSSTVSTTTTSNSTNESSTATATSTA 111
>gi|5902766|sp|Q28462|AMEL_MONDO AMELOGENIN >gi|1165223|gb|AAB41109.1| (U43407)
amelogenin [Monodelphis domestica]
Length = 202
Frame 1 hits (HSPs): ___________________________
Annotated Domains: _______________________________________ ______
__________________________________________________
Database sequence: | | | | || 202
0 50 100 150 200
__________________
Annotated Domains:
Entrez phosphorylation site: (BY SIMILARITY). 16
PRODOM PD001830: HSP1(29) VE2(21) GAG(12) 5..155
PRODOM PD192116: AMEL_MONDO 181..201
__________________
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 2.7, P = 0.93
Identities = 27/106 (25%), Positives = 45/106 (42%), Frame = +1
Query: 64 GYSPHHPGPGSSPKGSDRGDPEPSEAVPLGGAFLPVPFHGHILEVRNQA*L*GXFLHPFR 243
G+ H P S + S P +P+ A P P ++ V Q + H
Sbjct: 44 GWLHHQIIPVLSQQHSPSHSLPPQHHIPIMAAQQPAPPQQPVMPVPGQHPMAPTQHHQPN 103
Query: 244 APSP-PEIYHEEPTQRP-PHRRRTPLL-LAPLLRHQPRRQDRPLEP 372
P P + Y +P Q+P PH+ P+ + P+ QP + +P++P
Sbjct: 104 LPQPGQQPYQPQPAQQPQPHQPIQPIQPIQPIQPMQPMQPMQPMQP 149
>gi|7291632|gb|AAF47055.1| (AE003461) CG13560 gene product [Drosophila
melanogaster]
Length = 181
Frame 3 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | 181
0 50 100 150
Plus Strand HSPs:
Score = 81 (28.5 bits), Expect = 2.8, P = 0.94
Identities = 23/53 (43%), Positives = 37/53 (69%), Frame = +3
Query: 240 PSTFATRNLS*RANATPSSSPPHSSSTGSSTPSPTSSSGSTT*TSVSNA*KNR 398
PST +T + S N +PS++ P +S T S++PS +SSSGS++ S S++ +NR
Sbjct: 103 PST-STGSSS--TNPSPSTTSPSTSPTTSTSPSDSSSSGSSS--SSSSSKRNR 150
>gi|7498608|pir||T33852 hypothetical protein F08B6.5 - Caenorhabditis elegans
>gi|3886092|gb|AAC78233.1| (AF106590) contains similarity to
Drosophila melanogaster LATS (GB:U29608) [Caenorhabditis elegans]
Length = 265
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | | 265
0 50 100 150 200 250
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 3.5, P = 0.97
Identities = 14/36 (38%), Positives = 20/36 (55%), Frame = +1
Query: 73 PHHPGPGSSPKGSDRGDPEPSEAVPLGGAFLPVPFH 180
PH+P ++P S P +A P+ G F+P PFH
Sbjct: 67 PHNPSLSTAPSSSSAQPPTMIQAHPMAGVFIPPPFH 102
>gi|7649953|dbj|BAA94196.1| (AB040776) ORF1 [TT virus]
Length = 57
Frame -2 hits (HSPs): ________
Frame -3 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | 57
0 20 40
Minus Strand HSPs:
Score = 42 (14.8 bits), Expect = 3.6, Sum P(2) = 0.97
Identities = 13/25 (52%), Positives = 14/25 (56%), Frame = -3
Query: 359 RS*RRGW*RSRGASRRGVRRR*GGR 285
R+ RR R RG R RRR GGR
Sbjct: 26 RTRRRRPARRRGRRRNVRRRRRGGR 50
Score = 37 (13.0 bits), Expect = 3.6, Sum P(2) = 0.97
Identities = 5/9 (55%), Positives = 7/9 (77%), Frame = -2
Query: 387 KRSRRWFKW 361
+R RRW +W
Sbjct: 8 RRRRRWRRW 16
>gi|102707|pir||S14085 protamine - common cuttlefish
Length = 57
Frame -2 hits (HSPs): ________________________
Frame -3 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | 57
0 20 40
Minus Strand HSPs:
Score = 41 (14.4 bits), Expect = 3.6, Sum P(2) = 0.97
Identities = 9/27 (33%), Positives = 16/27 (59%), Frame = -2
Query: 177 KRNRQKGTTERNGFRRFRVTAIRPFRR 97
+R R++ + R +RR R + R +RR
Sbjct: 29 RRRRRRRRSRRRRYRRRRSYSRRRYRR 55
Score = 38 (13.4 bits), Expect = 3.6, Sum P(2) = 0.97
Identities = 12/23 (52%), Positives = 12/23 (52%), Frame = -3
Query: 365 SGRS*RRGW*RSRGASRRGVRRR 297
S R RR RSR RR RRR
Sbjct: 7 SRRRRRRSRRRSRSPYRRRYRRR 29
>gi|9739251|gb|AAF93178.1| (AY005467) putative zinc finger protein Pac1
[Sclerotinia sclerotiorum]
Length = 625
Frame 3 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | 625
0 150 300 450 600
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 4.0, P = 0.98
Identities = 25/66 (37%), Positives = 40/66 (60%), Frame = +3
Query: 189 IGSTKPGLAVRXIPAPLPSTFATRNLS*RANATPSSSPPHSSSTGSSTPSPTSSSGSTT* 368
IGS P ++ AP+ +T ++ ++S + TP+ +PP SS + +S SP SSSG +
Sbjct: 377 IGSMAPHVSTSYASAPMTATHSSHSVS---SGTPALTPPSSSVSYTSGNSPMSSSGMSPI 433
Query: 369 T---SVSNA 386
+ S SNA
Sbjct: 434 SRHSSTSNA 442
>gi|7296099|gb|AAF51393.1| (AE003587) CG5011 gene product [Drosophila
melanogaster]
Length = 80
Frame 3 hits (HSPs): _________
Frame 1 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | | 80
0 20 40 60
Plus Strand HSPs:
Score = 51 (18.0 bits), Expect = 4.4, Sum P(2) = 0.99
Identities = 13/43 (30%), Positives = 19/43 (44%), Frame = +1
Query: 58 HNGYSPHHPGPGSSPK-GSDRGDPEPSEAVPLGGAFLPVPFHGH 186
H+ PH P P P G +P+P P+ + P HG+
Sbjct: 9 HHNPPPHGPPPHGPPHHGPPHHEPQPPFHTPVHPIYHEPP-HGN 51
Score = 45 (15.8 bits), Expect = 4.4, Sum P(2) = 0.99
Identities = 7/14 (50%), Positives = 10/14 (71%), Frame = +3
Query: 300 PPHSSSTGSSTPSP 341
PPH +S+G + P P
Sbjct: 47 PPHGNSSGYNPPPP 60
>gi|6320167 ref|NP_010247.1| Ydl037cp [Saccharomyces cerevisiae]
>gi|2131317|pir||S67570 hypothetical protein YDL037c - yeast
(Saccharomyces cerevisiae) >gi|1279679|emb|CAA96452.1| (Z71781)
unknown [Saccharomyces cerevisiae] >gi|1431020|emb|CAA98596.1|
(Z74085) ORF YDL037c [Saccharomyces cerevisiae]
Length = 328
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | 328
0 150 300
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 4.9, P = 0.99
Identities = 21/72 (29%), Positives = 39/72 (54%), Frame = +3
Query: 174 FSWTY-IGSTKPGLAVRXIPAPLPSTFATRNLS*RANATPSSSPPHSSSTGSSTPSPTSS 350
F WTY G + + + ++ T + + ++ T SS+ SS+T SST S +++
Sbjct: 143 FYWTYQCKGNNDGTCTKASSSSITTSSITTSSTTTSSTTTSSTTTSSSTTSSSTTSSSTT 202
Query: 351 SGSTT*TSVSNA 386
S STT +S +++
Sbjct: 203 SSSTTSSSTTSS 214
>gi|7504730|pir||T16509 hypothetical protein F59A6.3 - Caenorhabditis elegans
>gi|1123052|gb|AAA83456.1| (U41994) similar to glycoproteins
[Caenorhabditis elegans]
Length = 786
Frame 3 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | | | 786
0 150 300 450 600 750
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 5.3, P = 1.0
Identities = 35/98 (35%), Positives = 52/98 (53%), Frame = +3
Query: 72 SSPSRAWKLSERV*SR*PGTF*SRSSRWCLSACSFSWTYIGSTK-PGLAVRXIPAPLPST 248
S+ SRA S+ + P T S S+ S FS T +GS++ PG +V P P ST
Sbjct: 348 STTSRASSASDDPTTTGPSTT-SGSTASTTSGSLFS-TSLGSSQSPGSSVSTTPGP--ST 403
Query: 249 FATRNLS*RANATPSSSPPHSS-STGSSTPSPTSSSGSTT 365
+ + S + T +S P +S ST S T P+++SG +T
Sbjct: 404 ISGISQSTTSGPTTTSEPSTTSGSTVSDTSGPSTTSGPST 443
>gi|1244446|gb|AAA93249.1| (U28807) NFATc3 [Mus musculus]
Length = 1065
Frame 3 hits (HSPs): ___
Frame 1 hits (HSPs): __
__________________________________________________
Database sequence: | | | | | | | || 1065
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 73 (25.7 bits), Expect = 5.4, Sum P(2) = 1.0
Identities = 17/39 (43%), Positives = 19/39 (48%), Frame = +1
Query: 70 SPHH---PGPGSSPKGSDRGDPEPSEAVPLGGAFLPVPF 177
SPHH P PG SP+GS D + V G P PF
Sbjct: 278 SPHHSPVPSPGHSPRGSVTEDTWLTAPVHTGSGLSPAPF 316
Score = 57 (20.1 bits), Expect = 5.4, Sum P(2) = 1.0
Identities = 24/55 (43%), Positives = 28/55 (50%), Frame = +3
Query: 183 TYIGSTKPGLAVRXIPA---PLPSTFATRNLS*RANATPSSSPPHSSSTGSSTPSPTS 347
TY S PG A PA PL S+ + S + P SP SS T SS PSPT+
Sbjct: 903 TYCPS-HPGSATAASPAASHPLASSPISGPSSPQLQPMPYQSP--SSGTASS-PSPTT 956
>gi|2137823|pir||A57410 transcription factor NFATc3 - mouse (fragment)
Length = 1065
Frame 3 hits (HSPs): ___
Frame 1 hits (HSPs): __
Annotated Domains: _
__________________________________________________
Database sequence: | | | | | | | || 1065
0 150 300 450 600 750 900 1050
__________________
Annotated Domains:
PROSITE THIOL_PROTEASE_HIS: Eukaryotic thiol (cy 604..614
__________________
Plus Strand HSPs:
Score = 73 (25.7 bits), Expect = 5.4, Sum P(2) = 1.0
Identities = 17/39 (43%), Positives = 19/39 (48%), Frame = +1
Query: 70 SPHH---PGPGSSPKGSDRGDPEPSEAVPLGGAFLPVPF 177
SPHH P PG SP+GS D + V G P PF
Sbjct: 278 SPHHSPVPSPGHSPRGSVTEDTWLTAPVHTGSGLSPAPF 316
Score = 57 (20.1 bits), Expect = 5.4, Sum P(2) = 1.0
Identities = 24/55 (43%), Positives = 28/55 (50%), Frame = +3
Query: 183 TYIGSTKPGLAVRXIPA---PLPSTFATRNLS*RANATPSSSPPHSSSTGSSTPSPTS 347
TY S PG A PA PL S+ + S + P SP SS T SS PSPT+
Sbjct: 903 TYCPS-HPGSATAASPAASHPLASSPISGPSSPQLQPMPYQSP--SSGTASS-PSPTT 956
>gi|9087154|sp|P97305|NFC3_MOUSE NUCLEAR FACTOR OF ACTIVATED T-CELLS,
CYTOPLASMIC 3 (T CELL TRANSCRIPTION FACTOR NFAT4) (NF-ATC3)
(NF-AT4) (NFATX) >gi|1842165|dbj|BAA12833.1| (D85612) NFATx [Mus
musculus]
Length = 1075
Frame 3 hits (HSPs): ___
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | | | | 1075
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 73 (25.7 bits), Expect = 5.5, Sum P(2) = 1.0
Identities = 17/39 (43%), Positives = 19/39 (48%), Frame = +1
Query: 70 SPHH---PGPGSSPKGSDRGDPEPSEAVPLGGAFLPVPF 177
SPHH P PG SP+GS D + V G P PF
Sbjct: 288 SPHHSPVPSPGHSPRGSVTEDTWLTAPVHTGSGLSPAPF 326
Score = 57 (20.1 bits), Expect = 5.5, Sum P(2) = 1.0
Identities = 24/55 (43%), Positives = 28/55 (50%), Frame = +3
Query: 183 TYIGSTKPGLAVRXIPA---PLPSTFATRNLS*RANATPSSSPPHSSSTGSSTPSPTS 347
TY S PG A PA PL S+ + S + P SP SS T SS PSPT+
Sbjct: 913 TYCPS-HPGSATAASPAASHPLASSPISGPSSPQLQPMPYQSP--SSGTASS-PSPTT 966
>gi|3288485|emb|CAA75874.1| (Y15914) COL1A1 and PDGFB fusion transcript [Homo
sapiens]
Length = 66
Frame 1 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | 66
0 20 40 60
Plus Strand HSPs:
Score = 62 (21.8 bits), Expect = 5.5, P = 1.0
Identities = 19/44 (43%), Positives = 23/44 (52%), Frame = +1
Query: 43 RGRRGHNGYSPHHPGPGSSPKGSDRGDPEPSEAV-PLGGAFLPVP 174
RG +GH G+S PG P GS G+ PS A P G P+P
Sbjct: 10 RGIKGHRGFSGLQGPPG--PPGSP-GEQGPSGASGPAGPRGDPIP 51
Score = 61 (21.5 bits), Expect = 7.2, P = 1.0
Identities = 19/44 (43%), Positives = 22/44 (50%), Frame = +1
Query: 43 RGRRGHNGYS-----PHHPG-PGSS-PKGSD-----RGDPEPSE 138
RG +GH G+S P PG PG P G+ RGDP P E
Sbjct: 10 RGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGDPIPEE 53
>gi|1082607|pir||S53366 mucin 5AC (clone MAR10) - human (fragment)
>gi|563383|emb|CAA84035.1| (Z34281) mucin [Homo sapiens]
Length = 62
Frame 3 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | 62
0 20 40 60
Plus Strand HSPs:
Score = 62 (21.8 bits), Expect = 5.5, P = 1.0
Identities = 15/35 (42%), Positives = 26/35 (74%), Frame = +3
Query: 282 ATPSSSPPHSSSTGSSTPSPTSSSGSTT*TSVSNA 386
++P++S S+ T S+T +PT+S+ ST TS+S+A
Sbjct: 9 SSPTTSTT-SAPTTSTTSAPTTSTTSTPQTSISSA 42
>gi|940761|emb|CAA59889.1| (X85877) invasive associated protein [Listeria
monocytogenes]
Length = 86
Frame 3 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | | | 86
0 20 40 60 80
Plus Strand HSPs:
Score = 62 (21.8 bits), Expect = 5.5, P = 1.0
Identities = 18/57 (31%), Positives = 32/57 (56%), Frame = +3
Query: 228 PAPLPSTFATRNLS*RANATPSSSPPHSSSTGSSTPSPTSSSGSTT*TSV-SNA*KNR 398
PAP PST NA +++ ++++T ++TPS +++ S T T+ SN N+
Sbjct: 14 PAPAPST--------NTNANKTNTNTNTNNTNTNTPSKNTNTNSNTNTNTNSNTNANQ 63
>gi|8927178|gb|AAF81989.1|AF178695_1 (AF178695) gp15 antigen [Cryptosporidium
parvum]
Length = 104
Frame 3 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | | | 104
0 20 40 60 80 100
Plus Strand HSPs:
Score = 70 (24.6 bits), Expect = 6.3, P = 1.0
Identities = 25/57 (43%), Positives = 34/57 (59%), Frame = +3
Query: 213 AVRXIPA-PLPSTFATRNLS*RANATPSSSPPHSSSTGSSTPSPTSSSGSTT*TSVSN 383
AV PA PL T +++S +++ SSS SSS+ SS+ S +SSS STT SN
Sbjct: 9 AVFSAPAVPLRGTL--KDVSVEGSSSSSSS---SSSSSSSSSSSSSSSSSTTVAPASN 61
>gi|9628079 ref|NP_042673.1| ORF E9; serine/threonine rich protein with
hydrophobic N- and C-terminal domains [Equine herpesvirus 2]
>gi|1360818|pir||S55670 hypothetical protein E9 - equine
herpesvirus 2 >gi|695249|gb|AAC13864.1| (U20824) ORF E9;
serine/threonine rich protein with hydrophobic N- and C-terminal
domains [Equine herpesvirus 2]
Length = 205
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | | | 205
0 50 100 150 200
Plus Strand HSPs:
Score = 79 (27.8 bits), Expect = 6.4, P = 1.0
Identities = 33/111 (29%), Positives = 57/111 (51%), Frame = +3
Query: 183 TYIGSTKPGLAVRXIPAPLPSTFATRNLS*RANATPSSSPPH-SSSTGSSTPSPTSSSGS 359
T ++ + V P T +T +L+ ++T SS+ + SSST ++T S T S+ S
Sbjct: 62 TNSSASSTSVTVASTATTSPQTNSTTSLTSPLSSTFSSTSANVSSSTTTTTSSTTKSTSS 121
Query: 360 TT*TSVSNA*KNRD*DFTLADKSVNQSLGYKLGVFFLVLXRIYFYLLFLSFL 515
T + N K ++ A+ +V SLG L +F L+L I F ++ + F+
Sbjct: 122 TKPKTSKNNPKTQE---AGAEAAVMISLGI-LYLFILLL--IIFVIILICFI 167
>gi|11346533|pir||T44657 protein GP80 [imported] - bovine herpesvirus 4
>gi|1834361|emb|CAB06616.1| (Z84818) GP80 [Bovine herpesvirus 4]
Length = 273
Frame 3 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | | | 273
0 50 100 150 200 250
Plus Strand HSPs:
Score = 81 (28.5 bits), Expect = 6.4, P = 1.0
Identities = 24/82 (29%), Positives = 46/82 (56%), Frame = +3
Query: 195 STKPGLAVRXIPAPLPSTFATRNLS*RANATPSSSPPHSSSTG-SSTPSPTSSSGSTT*T 371
ST + + +P PS+ + + + ++++P+S+P +++T SST + T+SS STT +
Sbjct: 52 STSSNASTSSVSSPSPSSSSVPSTATSSSSSPTSTPTATTTTATSSTSTNTTSSVSTTVS 111
Query: 372 SVSNA*KNRD*DFTLADKSVNQS 440
S ++ TL S NQ+
Sbjct: 112 STASQ------STTLTSTSTNQT 128
>gi|5821151|dbj|BAA83717.1| (AB016091) RNA binding protein [Homo sapiens]
Length = 1275
Frame 3 hits (HSPs): _____
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | 1275
0 500 1000
Plus Strand HSPs:
Score = 77 (27.1 bits), Expect = 6.7, Sum P(2) = 1.0
Identities = 20/53 (37%), Positives = 34/53 (64%), Frame = +3
Query: 228 PAPLPSTFATRNLS*RANATPSSSPPHSSSTGSSTPSPTSSSGSTT*TSVSNA 386
P P P+ R+ S ++++ SSS SSS+ SS+ S +SSS S++ +S S++
Sbjct: 1119 PEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 1171
Score = 77 (27.1 bits), Expect = 6.7, Sum P(2) = 1.0
Identities = 27/86 (31%), Positives = 45/86 (52%), Frame = +3
Query: 138 SRSSRWCLSACSFSWTYIGST---KPGLAVRXIPAPLPSTFATRNLS*RANATPSSSPPH 308
S SS S+ S S GS+ +P +A++ +P+P P+ TP+
Sbjct: 1070 SSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRR 1129
Query: 309 SSSTGSSTPSPTSSSGSTT*TSVSNA 386
SSS+ SS+ S +SSS S++ +S S++
Sbjct: 1130 SSSSSSSSSSSSSSSSSSSSSSSSSS 1155
Score = 53 (18.7 bits), Expect = 6.7, Sum P(2) = 1.0
Identities = 15/39 (38%), Positives = 19/39 (48%), Frame = +1
Query: 1 RRSDGARVGCARVRRGRRGHNGYSPHHPGPGSSPKGSDR 117
RR +R +RV R RRG +GY P S + S R
Sbjct: 322 RRRQRSR-SRSRVTRRRRGGSGYHSRSPARQESSRTSSR 359
>gi|9631412 ref|NP_048320.1| ORF MSV249 hypotehtical protein [Melanoplus
sanguinipes entomopoxvirus] >gi|11361206|pir||T28410 hypothetical
protein MSV249 [imported] - Melanoplus sanguinipes entomopoxvirus
>gi|4049765|gb|AAC97725.1| (AF063866) ORF MSV249 hypotehtical
protein [Melanoplus sanguinipes entomopoxvirus]
Length = 63
Frame 3 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | | 63
0 20 40 60
Plus Strand HSPs:
Score = 61 (21.5 bits), Expect = 7.2, P = 1.0
Identities = 12/31 (38%), Positives = 20/31 (64%), Frame = +3
Query: 447 YKLGVFFLVLXRIYFYLLFLSFLFFLSKSMF 539
YK+ +FF +L IY Y+L++ FF K ++
Sbjct: 12 YKILIFF-ILYLIYVYILYVKNSFFFEKIIY 41
>gi|6670924|gb|AAF23071.1|AF068267_5 (AF068267) unknown [Streptomyces
coelicolor A3(2)]
Length = 61
Frame 3 hits (HSPs): ___________________________________________
__________________________________________________
Database sequence: | | | | | 61
0 20 40 60
Plus Strand HSPs:
Score = 61 (21.5 bits), Expect = 7.2, P = 1.0
Identities = 18/52 (34%), Positives = 29/52 (55%), Frame = +3
Query: 213 AVRXIPAPLPSTFATRNLS*RAN--ATPSSSPPHSSSTGSSTPSPTSSSGSTT 365
A +P P+P+ FA L R + +T +P SS+T +S+PS + + S T
Sbjct: 7 AADRLP-PVPAPFACSRLPRRTSIRSTTLVAPGASSATATSSPSALARTSSRT 58
>gi|11559406|dbj|BAB18772.1| (AB044885) dopamine receptor D4 [Canis familiaris]
Length = 99
Frame 3 hits (HSPs): ______________________
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | 99
0 20 40 60 80
Plus Strand HSPs:
Score = 54 (19.0 bits), Expect = 7.4, Sum P(2) = 1.0
Identities = 16/44 (36%), Positives = 20/44 (45%), Frame = +3
Query: 228 PAPLPSTFATRNLS*RANATPSSSPPHSSSTGSS--TPSPTSSSGS 359
P+P P + S + TP PP S G+S TP P GS
Sbjct: 18 PSPPPPDGSPDGTS---DGTPGPPPPDGSPDGTSDGTPGPPPPDGS 60
Score = 47 (16.5 bits), Expect = 7.4, Sum P(2) = 1.0
Identities = 9/20 (45%), Positives = 10/20 (50%), Frame = +1
Query: 73 PHHPGPGSSPKGSDRGDPEP 132
P P P SP G+ G P P
Sbjct: 1 PGPPPPDGSPDGTPDGTPSP 20
>gi|5816699|dbj|BAA83684.1| (AB030237) D4 dopamine receptor [Canis familiaris]
Length = 116
Frame 3 hits (HSPs): __________________________
Frame 1 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | 116
0 50 100
Plus Strand HSPs:
Score = 57 (20.1 bits), Expect = 7.5, Sum P(2) = 1.0
Identities = 18/49 (36%), Positives = 22/49 (44%), Frame = +3
Query: 228 PAPLPSTFATRNLS*RANATPSSSPPHSSSTGS--STPSPTSSSGSTT*TS 374
P+P P + S + TP PP S G+ TPSP GS TS
Sbjct: 18 PSPPPPDGSPDGTS---DGTPGPPPPDGSPDGTPDGTPSPPPPDGSPDGTS 65
Score = 56 (19.7 bits), Expect = 8.6, Sum P(2) = 1.0
Identities = 13/29 (44%), Positives = 15/29 (51%), Frame = +3
Query: 279 NATPSSSPPHSSSTGSS--TPSPTSSSGS 359
+ TPS PP S G+S TP P GS
Sbjct: 49 DGTPSPPPPDGSPDGTSDGTPGPPPPDGS 77
Score = 48 (16.9 bits), Expect = 8.6, Sum P(2) = 1.0
Identities = 9/21 (42%), Positives = 11/21 (52%), Frame = +1
Query: 70 SPHHPGPGSSPKGSDRGDPEP 132
+P P P SP G+ G P P
Sbjct: 17 TPSPPPPDGSPDGTSDGTPGP 37
Score = 47 (16.5 bits), Expect = 7.5, Sum P(2) = 1.0
Identities = 9/20 (45%), Positives = 10/20 (50%), Frame = +1
Query: 73 PHHPGPGSSPKGSDRGDPEP 132
P P P SP G+ G P P
Sbjct: 1 PGPPPPDGSPDGTPDGTPSP 20
>gi|2911818|gb|AAC04391.1| (AF047652) C34H4.2 gene product [Caenorhabditis
elegans]
Length = 448
Frame 3 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | 448
0 150 300
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 7.7, P = 1.0
Identities = 26/74 (35%), Positives = 40/74 (54%), Frame = +3
Query: 141 RSSRWCLSACSFSWTYIGSTKPGLAVRXIPAPLPS-TFATRNLS*RANATPSSSPPHSSS 317
+SSR + A +F Y G + L + + S T + +A+ TPSS+PP +
Sbjct: 327 KSSR--IFAGTFYCQYFGISTAMLPISSSSTTVTSPAIITTSQGGKASTTPSSAPP---A 381
Query: 318 TGSSTPSPTSSSGST 362
GSS+ SPT +SGS+
Sbjct: 382 PGSSSASPTGTSGSS 396
>gi|1082603|pir||S53365 mucin 5AC (clone CEL2) - human (fragment)
>gi|563373|emb|CAA84030.1| (Z34276) mucin [Homo sapiens]
Length = 94
Frame 3 hits (HSPs): _____________________________________
__________________________________________________
Database sequence: | | | | | | 94
0 20 40 60 80
Plus Strand HSPs:
Score = 66 (23.2 bits), Expect = 7.9, P = 1.0
Identities = 23/69 (33%), Positives = 35/69 (50%), Frame = +3
Query: 195 STKPGLAVRXIPAPLPSTFATRNLS*RANATPSSSPPHSSSTGS---STPSP--TSSSGS 359
ST G P P ST + S + +T S++ ++ST S +TPSP T+S+ S
Sbjct: 19 STTSGPGTTPSPVPTTSTISVPTTSTTSASTTSTTSASTTSTTSGPGTTPSPVPTTSTTS 78
Query: 360 TT*TSVSNA 386
TS ++A
Sbjct: 79 APTTSTTSA 87
>gi|180416|gb|AAA52003.1| (M13146) alpha-1 type III collagen [Homo sapiens]
Length = 40
Frame 1 hits (HSPs): _____________________________________
__________________________________________________
Database sequence: | | | 40
0 20
Plus Strand HSPs:
Score = 60 (21.1 bits), Expect = 9.3, P = 1.0
Identities = 18/33 (54%), Positives = 18/33 (54%), Frame = +1
Query: 34 RVRRGRRGHNGYSPHHPG-PGSSPKGSDRGDPEP 132
R RG RG G SP HPG PG P G G P P
Sbjct: 6 RGNRGERGSEG-SPGHPGQPG--PPGPP-GAPGP 35
>gi|180418|gb|AAA52004.1| (M11134) alpha-1(III) procollagen [Homo sapiens]
Length = 32
Frame 1 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | 32
0 20
Plus Strand HSPs:
Score = 60 (21.1 bits), Expect = 9.3, P = 1.0
Identities = 18/33 (54%), Positives = 18/33 (54%), Frame = +1
Query: 34 RVRRGRRGHNGYSPHHPG-PGSSPKGSDRGDPEP 132
R RG RG G SP HPG PG P G G P P
Sbjct: 2 RGNRGERGSEG-SPGHPGQPG--PPGPP-GAPGP 31
>gi|8927182|gb|AAF81991.1|AF178697_1 (AF178697) gp15 antigen [Cryptosporidium
parvum]
Length = 59
Frame 3 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | 59
0 20 40
Plus Strand HSPs:
Score = 60 (21.1 bits), Expect = 9.3, P = 1.0
Identities = 18/45 (40%), Positives = 27/45 (60%), Frame = +3
Query: 213 AVRXIPA-PLPSTFATRNLS*RANATPSSSPPHSSSTGSSTPSPTS 347
AV PA PL T ++ ++++ SSS SSS+ S+TP+P S
Sbjct: 9 AVFSAPAVPLRGTLKDVSVE-GSSSSSSSSSSSSSSSSSTTPAPAS 53
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.97
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.352 0.151 0.541
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.347 0.154 0.523
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.330 0.148 0.484
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.331 0.147 0.449
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.340 0.142 0.463
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.344 0.155 0.548
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 179 177 10. 76 3 12 22 0.11 34
31 0.11 37
+2 0 180 177 10. 76 3 12 22 0.11 34
31 0.11 37
+1 0 180 177 10. 76 3 12 22 0.11 34
31 0.11 37
-1 0 180 178 10. 76 3 12 22 0.11 34
31 0.11 37
-2 0 180 177 10. 76 3 12 22 0.11 34
31 0.11 37
-3 0 179 177 10. 76 3 12 22 0.11 34
31 0.11 37
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 42
No. of states in DFA: 590 (58 KB)
Total size of DFA: 191 KB (192 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 206.84u 1.13s 207.97t Elapsed: 00:00:42
Total cpu time: 206.90u 1.16s 208.06t Elapsed: 00:00:42
Start: Mon Oct 1 19:20:31 2001 End: Mon Oct 1 19:21:13 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000