R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|625546|pir||S44029 photosystem II oxygen-evolving complex protein 2
precursor - common tobacco >gi|417604|emb|CAA45699.1| (X64347) 23
kDa polypeptide of water-oxidizing complex of photosystem II
[Nicotiana tabacum]
Length = 268
Frame 3 hits (HSPs): ___
Frame 2 hits (HSPs): ________________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | 268
0 50 100 150 200 250
Plus Strand HSPs:
Score = 478 (168.3 bits), Expect = 7.4e-57, Sum P(3) = 7.4e-57
Identities = 95/126 (75%), Positives = 110/126 (87%), Frame = +2
Query: 11 STKPNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAAN 190
S KPN +VC+A QKQ + QE +D + +VSRRLALTVLIGAAA+GSKV+PADAAYGEAAN
Sbjct: 32 SLKPNQLVCRA-QKQSSPQE-DDGNSVVVSRRLALTVLIGAAAIGSKVSPADAAYGEAAN 89
Query: 191 VFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATD 370
VFGKPK NTDFL+YNG+GFKL +P+KWNPSKEVE+PGQVLRYEDNFDSTSN+ V VT TD
Sbjct: 90 VFGKPKKNTDFLAYNGDGFKLQVPAKWNPSKEVEFPGQVLRYEDNFDSTSNLIVTVTPTD 149
Query: 371 KNPSLT 388
K S+T
Sbjct: 150 KK-SIT 154
Score = 108 (38.0 bits), Expect = 7.4e-57, Sum P(3) = 7.4e-57
Identities = 20/24 (83%), Positives = 24/24 (100%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
++SITDYGSPEEFL+QVD+LLGKQ
Sbjct: 150 KKSITDYGSPEEFLTQVDFLLGKQ 173
Score = 38 (13.4 bits), Expect = 7.4e-57, Sum P(3) = 7.4e-57
Identities = 6/9 (66%), Positives = 9/9 (100%), Frame = +3
Query: 453 QTDAEGGFD 479
+TD+EGGF+
Sbjct: 176 KTDSEGGFE 184
>gi|82188|pir||S17445 photosystem II oxygen-evolving complex protein 2
precursor - common tobacco (fragment) >gi|19896|emb|CAA41713.1|
(X58910) photosystem II 23 kDa polypeptide [Nicotiana tabacum]
Length = 229
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): ____________________________
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | | 229
0 50 100 150 200
Plus Strand HSPs:
Score = 478 (168.3 bits), Expect = 2.7e-54, Sum P(2) = 2.7e-54
Identities = 95/126 (75%), Positives = 110/126 (87%), Frame = +2
Query: 11 STKPNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAAN 190
S KPN +VC+A QKQ + QE +D + +VSRRLALTVLIGAAA+GSKV+PADAAYGEAAN
Sbjct: 32 SLKPNQLVCRA-QKQSSPQE-DDGNSVVVSRRLALTVLIGAAAIGSKVSPADAAYGEAAN 89
Query: 191 VFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATD 370
VFGKPK NTDFL+YNG+GFKL +P+KWNPSKEVE+PGQVLRYEDNFDSTSN+ V VT TD
Sbjct: 90 VFGKPKENTDFLAYNGDGFKLQVPAKWNPSKEVEFPGQVLRYEDNFDSTSNLIVTVTPTD 149
Query: 371 KNPSLT 388
K S+T
Sbjct: 150 KK-SIT 154
Score = 110 (38.7 bits), Expect = 2.7e-54, Sum P(2) = 2.7e-54
Identities = 21/29 (72%), Positives = 25/29 (86%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQPSLAK 456
++SITDYGSPEEFL+QVD+LLGKQ K
Sbjct: 150 KKSITDYGSPEEFLTQVDFLLGKQAYFGK 178
Score = 60 (21.1 bits), Expect = 4.8e-49, Sum P(2) = 4.8e-49
Identities = 13/29 (44%), Positives = 19/29 (65%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K +FG+TD+EGGF+ + N+LE
Sbjct: 169 LLGKQAYFGKTDSEGGFESGAVATANLLE 197
>gi|19898|emb|CAA41712.1| (X58909) photosystem II 23 kDa polypeptide [Nicotiana
tabacum]
Length = 261
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): ________________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | 261
0 50 100 150 200 250
Plus Strand HSPs:
Score = 478 (168.3 bits), Expect = 2.7e-54, Sum P(2) = 2.7e-54
Identities = 95/126 (75%), Positives = 110/126 (87%), Frame = +2
Query: 11 STKPNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAAN 190
S KPN +VC+A QKQ + QE +D + +VSRRLALTVLIGAAA+GSKV+PADAAYGEAAN
Sbjct: 25 SLKPNQLVCRA-QKQSSPQE-DDGNSVVVSRRLALTVLIGAAAIGSKVSPADAAYGEAAN 82
Query: 191 VFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATD 370
VFGKPK NTDFL+YNG+GFKL +P+KWNPSKEVE+PGQVLRYEDNFDSTSN+ V VT TD
Sbjct: 83 VFGKPKENTDFLAYNGDGFKLQVPAKWNPSKEVEFPGQVLRYEDNFDSTSNLIVTVTPTD 142
Query: 371 KNPSLT 388
K S+T
Sbjct: 143 KK-SIT 147
Score = 110 (38.7 bits), Expect = 2.7e-54, Sum P(2) = 2.7e-54
Identities = 21/29 (72%), Positives = 25/29 (86%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQPSLAK 456
++SITDYGSPEEFL+QVD+LLGKQ K
Sbjct: 143 KKSITDYGSPEEFLTQVDFLLGKQAYFGK 171
Score = 60 (21.1 bits), Expect = 4.8e-49, Sum P(2) = 4.8e-49
Identities = 13/29 (44%), Positives = 19/29 (65%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K +FG+TD+EGGF+ + N+LE
Sbjct: 162 LLGKQAYFGKTDSEGGFESGAVATANLLE 190
>gi|7443216|pir||S17446 photosystem II oxygen-evolving complex protein 2
precursor - common tobacco
Length = 268
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): ________________________
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | | | 268
0 50 100 150 200 250
Plus Strand HSPs:
Score = 478 (168.3 bits), Expect = 2.7e-54, Sum P(2) = 2.7e-54
Identities = 95/126 (75%), Positives = 110/126 (87%), Frame = +2
Query: 11 STKPNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAAN 190
S KPN +VC+A QKQ + QE +D + +VSRRLALTVLIGAAA+GSKV+PADAAYGEAAN
Sbjct: 32 SLKPNQLVCRA-QKQSSPQE-DDGNSVVVSRRLALTVLIGAAAIGSKVSPADAAYGEAAN 89
Query: 191 VFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATD 370
VFGKPK NTDFL+YNG+GFKL +P+KWNPSKEVE+PGQVLRYEDNFDSTSN+ V VT TD
Sbjct: 90 VFGKPKENTDFLAYNGDGFKLQVPAKWNPSKEVEFPGQVLRYEDNFDSTSNLIVTVTPTD 149
Query: 371 KNPSLT 388
K S+T
Sbjct: 150 KK-SIT 154
Score = 110 (38.7 bits), Expect = 2.7e-54, Sum P(2) = 2.7e-54
Identities = 21/29 (72%), Positives = 25/29 (86%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQPSLAK 456
++SITDYGSPEEFL+QVD+LLGKQ K
Sbjct: 150 KKSITDYGSPEEFLTQVDFLLGKQAYFGK 178
Score = 60 (21.1 bits), Expect = 4.8e-49, Sum P(2) = 4.8e-49
Identities = 13/29 (44%), Positives = 19/29 (65%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K +FG+TD+EGGF+ + N+LE
Sbjct: 169 LLGKQAYFGKTDSEGGFESGAVATANLLE 197
>gi|100362|pir||S20935 photosystem II oxygen-evolving complex protein 2
precursor (clone T23-5B) - common tobacco (fragment)
>gi|1345550|emb|CAA44292.1| (X62426) 23-kDa ploypeptide of
photosystem II oxygen-evolving complex [Nicotiana tabacum]
Length = 266
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): ________________________
Frame 1 hits (HSPs): ______
Annotated Domains: _______________
__________________________________________________
Database sequence: | | | | | | | 266
0 50 100 150 200 250
__________________
Annotated Domains:
Entrez domain: transit peptide (chloroplast) (f 1..80
__________________
Plus Strand HSPs:
Score = 479 (168.6 bits), Expect = 5.5e-54, Sum P(2) = 5.5e-54
Identities = 96/126 (76%), Positives = 109/126 (86%), Frame = +2
Query: 11 STKPNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAAN 190
S KPN +VC+A QKQ + QE +D + VSRRLALTVLIGAAAVGSKV+PADAAYGEAAN
Sbjct: 30 SLKPNQLVCRA-QKQSSAQE-DDGNSVAVSRRLALTVLIGAAAVGSKVSPADAAYGEAAN 87
Query: 191 VFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATD 370
VFGKPK NTDFL+YNG+GFKL +P+KWNPSKEVE+PGQVLRYEDNFDSTSN+ V VT TD
Sbjct: 88 VFGKPKQNTDFLAYNGDGFKLQVPAKWNPSKEVEFPGQVLRYEDNFDSTSNLIVTVTPTD 147
Query: 371 KNPSLT 388
K S+T
Sbjct: 148 KK-SIT 152
Score = 106 (37.3 bits), Expect = 5.5e-54, Sum P(2) = 5.5e-54
Identities = 21/29 (72%), Positives = 24/29 (82%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQPSLAK 456
++SIT YGSPEEFLSQVD+LLGKQ K
Sbjct: 148 KKSITGYGSPEEFLSQVDFLLGKQAYFGK 176
Score = 60 (21.1 bits), Expect = 3.8e-49, Sum P(2) = 3.8e-49
Identities = 13/29 (44%), Positives = 19/29 (65%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K +FG+TD+EGGF+ + N+LE
Sbjct: 167 LLGKQAYFGKTDSEGGFESGAVATANLLE 195
>gi|131390|sp|P16059|PSBP_PEA OXYGEN-EVOLVING ENHANCER PROTEIN 2, CHLOROPLAST
PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING SYSTEM OF
PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID MEMBRANE
PROTEIN) >gi|280396|pir||JS0771 photosystem II oxygen-evolving
complex protein 2 precursor - garden pea >gi|20617|emb|CAA33557.1|
(X15552) precursor polypeptide (AA -73 to 186) [Pisum sativum]
>gi|344006|dbj|BAA02553.1| (D13296) precursor for 23-kDa protein of
photosystem II [Pisum sativum]
Length = 259
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _______________________
Frame 1 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | 259
0 50 100 150 200 250
__________________
Annotated Domains:
PFAM PsbP: PsbP 57..259
PRODOM PD104317: PSBP_PEA 1..28
PRODOM PD005326: PSBP(6) 30..89
PRODOM PD003904: PSBP(7) 91..257
__________________
Plus Strand HSPs:
Score = 465 (163.7 bits), Expect = 4.9e-53, Sum P(2) = 4.9e-53
Identities = 94/127 (74%), Positives = 108/127 (85%), Frame = +2
Query: 8 VSTKPNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAA 187
V+TKPNHIVCKA QKQ +D +VSRRLAL+VLIGAAAVGSKV+PADAAYGEAA
Sbjct: 27 VTTKPNHIVCKA-QKQ------DDVVDAVVSRRLALSVLIGAAAVGSKVSPADAAYGEAA 79
Query: 188 NVFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTAT 367
NVFGK KTNTD+L YNG+GFKL +P+KWNPSKE E+PGQVLRYEDNFD+TSNV+V+V T
Sbjct: 80 NVFGKAKTNTDYLPYNGDGFKLLVPAKWNPSKEREFPGQVLRYEDNFDATSNVSVLVQTT 139
Query: 368 DKNPSLT 388
DK S+T
Sbjct: 140 DKK-SIT 145
Score = 111 (39.1 bits), Expect = 4.9e-53, Sum P(2) = 4.9e-53
Identities = 21/24 (87%), Positives = 24/24 (100%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
++SITDYGSPEEFLS+VDYLLGKQ
Sbjct: 141 KKSITDYGSPEEFLSKVDYLLGKQ 164
Score = 72 (25.3 bits), Expect = 6.2e-49, Sum P(2) = 6.2e-49
Identities = 17/29 (58%), Positives = 19/29 (65%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K FFGQTD+EGGFD + NILE
Sbjct: 160 LLGKQAFFGQTDSEGGFDTNAVAVANILE 188
>gi|266856|sp|P29795|PSBP_LYCES OXYGEN-EVOLVING ENHANCER PROTEIN 2, CHLOROPLAST
PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING SYSTEM OF
PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID MEMBRANE
PROTEIN) >gi|72723|pir||F2TOX2 photosystem II oxygen-evolving
complex protein 2 precursor - tomato >gi|19317|emb|CAA44736.1|
(X63007) photosystem II 23 kDa protein [Lycopersicon esculentum]
Length = 258
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): _______________________
Frame 1 hits (HSPs): _______
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | 258
0 50 100 150 200 250
__________________
Annotated Domains:
DOMO DM07153: PHOTOSYSTEMIIOXYGEN-EVOLVINGCOM 1..257
PFAM PsbP: PsbP 56..258
PRODOM PD036161: P93566(1) PSBP(1) 1..27
PRODOM PD005326: PSBP(6) 29..88
PRODOM PD003904: PSBP(7) 90..256
__________________
Plus Strand HSPs:
Score = 458 (161.2 bits), Expect = 1.6e-52, Sum P(2) = 1.6e-52
Identities = 91/126 (72%), Positives = 104/126 (82%), Frame = +2
Query: 11 STKPNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAAN 190
S KPN ++C+A QKQ +D + VSRRLALT+LIG AA+GSKV+PADAAYGEAAN
Sbjct: 27 SPKPNQLICRA-QKQ------DDASNAAVSRRLALTLLIGTAAIGSKVSPADAAYGEAAN 79
Query: 191 VFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATD 370
VFGKPK NTDFL YNG+GFKL +P+KWNPSKEVEYPGQVLRYEDNFDSTSN+ V VT TD
Sbjct: 80 VFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEYPGQVLRYEDNFDSTSNLIVAVTPTD 139
Query: 371 KNPSLT 388
K S+T
Sbjct: 140 KK-SIT 144
Score = 113 (39.8 bits), Expect = 1.6e-52, Sum P(2) = 1.6e-52
Identities = 22/29 (75%), Positives = 25/29 (86%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQPSLAK 456
++SITDYGSPEEFLS+VDYLLGKQ K
Sbjct: 140 KKSITDYGSPEEFLSKVDYLLGKQAYFGK 168
Score = 58 (20.4 bits), Expect = 9.9e-47, Sum P(2) = 9.9e-47
Identities = 10/18 (55%), Positives = 14/18 (77%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFD 479
L K +FG+TD+EGGF+
Sbjct: 159 LLGKQAYFGKTDSEGGFE 176
>gi|11134035|sp|P93566|PSBP_SOLTU OXYGEN-EVOLVING ENHANCER PROTEIN 2,
CHLOROPLAST PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING
SYSTEM OF PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID
MEMBRANE PROTEIN) >gi|1771778|emb|CAA67696.1| (X99320) 23 kDa
oxygen evolving protein of photosystem II [Solanum tuberosum]
Length = 260
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _______________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | 260
0 50 100 150 200 250
Plus Strand HSPs:
Score = 456 (160.5 bits), Expect = 2.6e-52, Sum P(2) = 2.6e-52
Identities = 90/126 (71%), Positives = 105/126 (83%), Frame = +2
Query: 11 STKPNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAAN 190
S KPN ++C+A QKQ + + T+ VSRRLALT+LIG AA+GSKV+PADAAYGEAAN
Sbjct: 27 SPKPNQLICRA-QKQ----DDANNTSNAVSRRLALTLLIGTAAIGSKVSPADAAYGEAAN 81
Query: 191 VFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATD 370
VFGKPK NTDFL YNG+GFKL IP+KWNPSKE+E+PGQVLRYEDNFDSTSN+ V VT TD
Sbjct: 82 VFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPGQVLRYEDNFDSTSNLMVAVTPTD 141
Query: 371 KNPSLT 388
K S+T
Sbjct: 142 KK-SIT 146
Score = 113 (39.8 bits), Expect = 2.6e-52, Sum P(2) = 2.6e-52
Identities = 22/29 (75%), Positives = 25/29 (86%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQPSLAK 456
++SITDYGSPEEFLS+VDYLLGKQ K
Sbjct: 142 KKSITDYGSPEEFLSKVDYLLGKQAYFGK 170
Score = 60 (21.1 bits), Expect = 9.9e-47, Sum P(2) = 9.9e-47
Identities = 13/29 (44%), Positives = 19/29 (65%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K +FG+TD+EGGF+ + N+LE
Sbjct: 161 LLGKQAYFGKTDSEGGFESGAVATANLLE 189
>gi|131392|sp|P12302|PSBP_SPIOL OXYGEN-EVOLVING ENHANCER PROTEIN 2, CHLOROPLAST
PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING SYSTEM OF
PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID MEMBRANE
PROTEIN) >gi|81479|pir||S00005 photosystem II oxygen-evolving
complex protein 2 precursor - spinach >gi|21265|emb|CAA29055.1|
(X05511) 23 kDa OEC protein [Spinacia oleracea]
>gi|225596|prf||1307179A luminal protein 23kD [Spinacia oleracea]
Length = 267
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): ________________________
Frame 1 hits (HSPs): ______
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | 267
0 50 100 150 200 250
__________________
Annotated Domains:
PFAM PsbP: PsbP 65..267
PRODOM PD104321: PSBP_SPIOL 1..32
PRODOM PD005326: PSBP(6) 34..97
PRODOM PD003904: PSBP(7) 99..265
__________________
Plus Strand HSPs:
Score = 454 (159.8 bits), Expect = 8.9e-52, Sum P(2) = 8.9e-52
Identities = 94/127 (74%), Positives = 106/127 (83%), Frame = +2
Query: 8 VSTKPNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAA 187
VS KPN IVCKA QKQ E +G VSRRLALTVLIGAAAVGSKV+PADAAYGEAA
Sbjct: 31 VSIKPNQIVCKA-QKQDD-NEANVLNSG-VSRRLALTVLIGAAAVGSKVSPADAAYGEAA 87
Query: 188 NVFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTAT 367
NVFGKPK NT+F+ YNG+GFKL +PSKWNPSKE E+PGQVLRYEDNFD+TSN++V+V T
Sbjct: 88 NVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKEKEFPGQVLRYEDNFDATSNLSVLVQPT 147
Query: 368 DKNPSLT 388
DK S+T
Sbjct: 148 DKK-SIT 153
Score = 110 (38.7 bits), Expect = 8.9e-52, Sum P(2) = 8.9e-52
Identities = 21/29 (72%), Positives = 25/29 (86%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQPSLAK 456
++SITD+GSPE+FLSQVDYLLGKQ K
Sbjct: 149 KKSITDFGSPEDFLSQVDYLLGKQAYFGK 177
Score = 68 (23.9 bits), Expect = 2.3e-47, Sum P(2) = 2.3e-47
Identities = 14/29 (48%), Positives = 20/29 (68%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K +FG+TD+EGGFD ++ N+LE
Sbjct: 168 LLGKQAYFGKTDSEGGFDSGVVASANVLE 196
>gi|131393|sp|P18212|PSBP_TOBAC OXYGEN-EVOLVING ENHANCER PROTEIN 2, CHLOROPLAST
PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING SYSTEM OF
PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID MEMBRANE
PROTEIN) >gi|100360|pir||S15005 photosystem II oxygen-evolving
complex protein 2 - common tobacco >gi|19911|emb|CAA39039.1|
(X55354) photosystem II 23kDa polypeptide [Nicotiana tabacum]
Length = 265
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): ________________________
Frame 1 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | 265
0 50 100 150 200 250
__________________
Annotated Domains:
PFAM PsbP: PsbP 63..265
PRODOM PD104318: PSBP_TOBAC 1..28
PRODOM PD005326: PSBP(6) 30..95
PRODOM PD003904: PSBP(7) 97..262
__________________
Plus Strand HSPs:
Score = 458 (161.2 bits), Expect = 1.1e-51, Sum P(2) = 1.1e-51
Identities = 94/126 (74%), Positives = 108/126 (85%), Frame = +2
Query: 11 STKPNHI-VCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAA 187
S KPN + VC+A QKQ QE ++ + VSRRLALTVLIGAAAVGSKV+PADAAYGEAA
Sbjct: 28 SLKPNQLLVCRA-QKQSAPQE-DNVNSVSVSRRLALTVLIGAAAVGSKVSPADAAYGEAA 85
Query: 188 NVFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTAT 367
NVFGKPKT+TDF +YNG+GFKL IPSKWNP+KEVEYPGQVLR+EDNFD+TSNV V +T T
Sbjct: 86 NVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSNVIVAITPT 145
Query: 368 DKNPSLT 388
DK S+T
Sbjct: 146 DKK-SIT 151
Score = 105 (37.0 bits), Expect = 1.1e-51, Sum P(2) = 1.1e-51
Identities = 19/24 (79%), Positives = 24/24 (100%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
++SITD+GSPE+FLSQVDYLLG+Q
Sbjct: 147 KKSITDFGSPEQFLSQVDYLLGRQ 170
Score = 49 (17.2 bits), Expect = 8.8e-46, Sum P(2) = 8.8e-46
Identities = 11/29 (37%), Positives = 18/29 (62%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L + + G+TD+EGGF+ + N+LE
Sbjct: 166 LLGRQAYSGKTDSEGGFESDAVAIANVLE 194
>gi|7443217|pir||JC5271 oxygen-evolving complex 23K protein - Arabidopsis
thaliana >gi|1769905|emb|CAA66785.1| (X98108) 23 kDa polypeptide of
oxygen-evolving comlex (OEC) [Arabidopsis thaliana]
>gi|6692695|gb|AAF24829.1|AC007592_22 (AC007592) F12K11.3
[Arabidopsis thaliana]
Length = 263
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): ________________________
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | | 263
0 50 100 150 200 250
Plus Strand HSPs:
Score = 450 (158.4 bits), Expect = 2.3e-51, Sum P(2) = 2.3e-51
Identities = 90/129 (69%), Positives = 105/129 (81%), Frame = +2
Query: 2 HEVSTKPNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGE 181
H +KP I+CKA Q ED + VSRRLALT+L+GAAAVGSKV+PADAAYGE
Sbjct: 29 HVSLSKPVQIICKAQQSH------EDDNSA-VSRRLALTLLVGAAAVGSKVSPADAAYGE 81
Query: 182 AANVFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVT 361
AANVFGKPKTNTDFL YNG+GFK+ +P+KWNPSKE+EYPGQVLR+EDNFD+TSN+ VMVT
Sbjct: 82 AANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVT 141
Query: 362 ATDKNPSLT 388
TDK S+T
Sbjct: 142 PTDKK-SIT 149
Score = 110 (38.7 bits), Expect = 2.3e-51, Sum P(2) = 2.3e-51
Identities = 21/24 (87%), Positives = 24/24 (100%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
++SITDYGSPEEFLSQV+YLLGKQ
Sbjct: 145 KKSITDYGSPEEFLSQVNYLLGKQ 168
Score = 58 (20.4 bits), Expect = 6.9e-46, Sum P(2) = 6.9e-46
Identities = 14/29 (48%), Positives = 18/29 (62%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K +FG+T +EGGFD + NILE
Sbjct: 164 LLGKQAYFGETASEGGFDNNAVATANILE 192
>gi|100361|pir||S20936 photosystem II oxygen-evolving complex protein 2
precursor (clone T23-2AF) - common tobacco
>gi|20030|emb|CAA44293.1| (X62427) 23-kDa polypeptide of
photosystem II oxygen-evolving complex [Nicotiana tabacum]
Length = 266
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): ________________________
Frame 1 hits (HSPs): _____
Annotated Domains: _______________
__________________________________________________
Database sequence: | | | | | | | 266
0 50 100 150 200 250
__________________
Annotated Domains:
Entrez domain: transit peptide (chloroplast) 1..80
PROSITE SULFATASE_1: Sulfatases signature 1. 12..24
__________________
Plus Strand HSPs:
Score = 447 (157.4 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
Identities = 90/126 (71%), Positives = 106/126 (84%), Frame = +2
Query: 11 STKPNHI-VCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAA 187
S K N + VC+A KQ Q+ ++ + VSRRLALT+LIGAAAVGSKV+PADAAYGEAA
Sbjct: 28 SLKSNQLLVCRAQNKQSAPQQ-DNVNSVSVSRRLALTLLIGAAAVGSKVSPADAAYGEAA 86
Query: 188 NVFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTAT 367
NVFGKPKT+TDF +YNG+GFKL IPSKWNP+KEVEYPGQVLR+EDNFD+TSNV V +T T
Sbjct: 87 NVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSNVIVAITPT 146
Query: 368 DKNPSLT 388
DK S+T
Sbjct: 147 DKK-SIT 152
Score = 105 (37.0 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
Identities = 19/24 (79%), Positives = 24/24 (100%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
++SITD+GSPE+FLSQVDYLLG+Q
Sbjct: 148 KKSITDFGSPEQFLSQVDYLLGRQ 171
Score = 49 (17.2 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 11/29 (37%), Positives = 18/29 (62%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L + + G+TD+EGGF+ + N+LE
Sbjct: 167 LLGRQAYSGKTDSEGGFESDAVAIANVLE 195
>gi|11134156|sp|Q9SLQ8|PSBP_CUCSA OXYGEN-EVOLVING ENHANCER PROTEIN 2,
CHLOROPLAST PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING
SYSTEM OF PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID
MEMBRANE PROTEIN) >gi|6691487|dbj|BAA89317.1| (AB032245) 23kDa
polypeptide of the oxygen-evolving complex of photosystem II
[Cucumis sativus]
Length = 263
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _______________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | 263
0 50 100 150 200 250
Plus Strand HSPs:
Score = 443 (155.9 bits), Expect = 7.0e-50, Sum P(2) = 7.0e-50
Identities = 88/118 (74%), Positives = 102/118 (86%), Frame = +2
Query: 20 PNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAANVFG 199
P +VC+A QKQ QE E G+VSRRLALTVLIGAAA+GSKV+PADAAYGEAANVFG
Sbjct: 32 PQLLVCRA-QKQQPAQEEEG---GVVSRRLALTVLIGAAALGSKVSPADAAYGEAANVFG 87
Query: 200 KPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATDK 373
KPK+NTD+L Y+G+GFKLSIPSKWNPSKE E+PGQVLRYEDNFDS SN++V++ TDK
Sbjct: 88 KPKSNTDYLPYSGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNLSVIINPTDK 145
Score = 103 (36.3 bits), Expect = 7.0e-50, Sum P(2) = 7.0e-50
Identities = 20/29 (68%), Positives = 24/29 (82%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQPSLAK 456
++SI D+GSPEEFLS+VDYLLGKQ K
Sbjct: 145 KKSIKDFGSPEEFLSKVDYLLGKQAYFGK 173
Score = 66 (23.2 bits), Expect = 5.4e-46, Sum P(2) = 5.4e-46
Identities = 15/29 (51%), Positives = 19/29 (65%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K +FG+T +EGGFDP + NILE
Sbjct: 164 LLGKQAYFGKTASEGGFDPDAVATANILE 192
>gi|100363|pir||S22237 photosystem II oxygen-evolving complex protein 2
precursor (clone TNM3) - common tobacco (fragment)
>gi|20003|emb|CAA44291.1| (X62425) 23-dDa polypeptide of
Photosystem II oxygen-evolving complex [Nicotiana tabacum]
Length = 166
Frame 2 hits (HSPs): ______________________________________
Frame 1 hits (HSPs): ______
Annotated Domains: _________________________
__________________________________________________
Database sequence: | | | | | 166
0 50 100 150
__________________
Annotated Domains:
Entrez domain: transit peptide (chloroplast) 1..82
__________________
Plus Strand HSPs:
Score = 470 (165.4 bits), Expect = 2.3e-49, Sum P(2) = 2.3e-49
Identities = 95/126 (75%), Positives = 108/126 (85%), Frame = +2
Query: 11 STKPNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAAN 190
S KPN +VC+A QKQ + QE +D + VSRRLALTVLIGAAAV SKV+PADAAYGEAAN
Sbjct: 32 SLKPNQLVCRA-QKQSSAQE-DDGNSVAVSRRLALTVLIGAAAVVSKVSPADAAYGEAAN 89
Query: 191 VFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATD 370
VFGKPK NTDFL+YNG+GFKL +P+KWNPSKEVE+PGQVLRYEDNFDSTSN+ V VT TD
Sbjct: 90 VFGKPKQNTDFLAYNGDGFKLQVPAKWNPSKEVEFPGQVLRYEDNFDSTSNLIVTVTPTD 149
Query: 371 KNPSLT 388
K S+T
Sbjct: 150 KK-SIT 154
Score = 71 (25.0 bits), Expect = 2.3e-49, Sum P(2) = 2.3e-49
Identities = 14/17 (82%), Positives = 16/17 (94%), Frame = +1
Query: 370 QESITDYGSPEEFLSQV 420
++SIT YGSPEEFLSQV
Sbjct: 150 KKSITGYGSPEEFLSQV 166
>gi|131391|sp|P11594|PSBP_SINAL OXYGEN-EVOLVING ENHANCER PROTEIN 2, CHLOROPLAST
PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING SYSTEM OF
PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID MEMBRANE
PROTEIN) >gi|81722|pir||S10016 photosystem II oxygen-evolving
complex protein 2 - white mustard >gi|21133|emb|CAA35081.1|
(X17213) oxygen-evolving complex of photosystem II [Sinapis alba]
Length = 260
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): ______________________
Frame 1 hits (HSPs): _____
Annotated Domains: ____________________________________________
__________________________________________________
Database sequence: | | | | | | | 260
0 50 100 150 200 250
__________________
Annotated Domains:
PFAM PsbP: PsbP 58..260
PRODOM PD005326: PSBP(6) 33..90
PRODOM PD003904: PSBP(7) 92..258
__________________
Plus Strand HSPs:
Score = 425 (149.6 bits), Expect = 1.0e-48, Sum P(2) = 1.0e-48
Identities = 86/120 (71%), Positives = 102/120 (85%), Frame = +2
Query: 29 IVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAANVFGKPK 208
+VCKA Q E ED +T VSRRLALT+L+GAAAVGSKV+PADAAYGEAANVFGKPK
Sbjct: 35 LVCKAQQ----THE-EDNST--VSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPK 87
Query: 209 TNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATDKNPSLT 388
NTDF +Y+G+GF++ +P+KWNPS+EVEYPGQVLRYEDNFD+TSN+ VMVT TDK S+T
Sbjct: 88 KNTDFTAYSGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKK-SIT 146
Score = 110 (38.7 bits), Expect = 1.0e-48, Sum P(2) = 1.0e-48
Identities = 21/24 (87%), Positives = 24/24 (100%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
++SITDYGSPEEFLSQV+YLLGKQ
Sbjct: 142 KKSITDYGSPEEFLSQVNYLLGKQ 165
Score = 58 (20.4 bits), Expect = 2.9e-43, Sum P(2) = 2.9e-43
Identities = 14/29 (48%), Positives = 18/29 (62%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K +FG+T +EGGFD + NILE
Sbjct: 161 LLGKQAYFGETASEGGFDNNAVATANILE 189
>gi|81723|pir||S03888 photosystem II oxygen-evolving complex protein 2
precursor - white mustard (fragment) >gi|829289|emb|CAA68801.1|
(Y07498) 23 kD subunit [Sinapis alba] >gi|226314|prf||1506342A O2
evolving complex 23kD protein [Sinapis alba]
Length = 248
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): _______________________
Frame 1 hits (HSPs): _____
Annotated Domains: _____________
__________________________________________________
Database sequence: | | | | | | 248
0 50 100 150 200
__________________
Annotated Domains:
Entrez domain: transit peptide (chloroplast) (f 1..62
__________________
Plus Strand HSPs:
Score = 425 (149.6 bits), Expect = 1.0e-48, Sum P(2) = 1.0e-48
Identities = 86/120 (71%), Positives = 102/120 (85%), Frame = +2
Query: 29 IVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAANVFGKPK 208
+VCKA Q E ED +T VSRRLALT+L+GAAAVGSKV+PADAAYGEAANVFGKPK
Sbjct: 23 LVCKAQQ----THE-EDNST--VSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPK 75
Query: 209 TNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATDKNPSLT 388
NTDF +Y+G+GF++ +P+KWNPS+EVEYPGQVLRYEDNFD+TSN+ VMVT TDK S+T
Sbjct: 76 KNTDFTAYSGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKK-SIT 134
Score = 110 (38.7 bits), Expect = 1.0e-48, Sum P(2) = 1.0e-48
Identities = 21/24 (87%), Positives = 24/24 (100%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
++SITDYGSPEEFLSQV+YLLGKQ
Sbjct: 130 KKSITDYGSPEEFLSQVNYLLGKQ 153
Score = 58 (20.4 bits), Expect = 2.9e-43, Sum P(2) = 2.9e-43
Identities = 14/29 (48%), Positives = 18/29 (62%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K +FG+T +EGGFD + NILE
Sbjct: 149 LLGKQAYFGETASEGGFDNNAVATANILE 177
>gi|11133887|sp|O49344|PSP2_ARATH OXYGEN-EVOLVING ENHANCER PROTEIN 2-2,
CHLOROPLAST PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING
SYSTEM OF PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID
MEMBRANE PROTEIN)
Length = 265
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): ________________________
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | | 265
0 50 100 150 200 250
Plus Strand HSPs:
Score = 427 (150.3 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 85/129 (65%), Positives = 101/129 (78%), Frame = +2
Query: 2 HEVSTKPNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPAD-AAYG 178
H ++P H+VC+A Q Q + V RRLALT+L+GAAA+GSKV+PA AAYG
Sbjct: 30 HVSLSRPVHLVCRAQQSQ-------ENNNSAVFRRLALTLLVGAAAIGSKVSPAPXAAYG 82
Query: 179 EAANVFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMV 358
EAANVFGKPK NTDFL Y G GFK+ IPSKWNPSKE+EYPGQVLR+EDNFD+TSNV+VM+
Sbjct: 83 EAANVFGKPKKNTDFLPYTGEGFKIQIPSKWNPSKEIEYPGQVLRFEDNFDATSNVSVMI 142
Query: 359 TATDKNPSLT 388
T TDK S+T
Sbjct: 143 TPTDKK-SIT 151
Score = 107 (37.7 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 20/24 (83%), Positives = 24/24 (100%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
++SITDYGSPE+FLSQV+YLLGKQ
Sbjct: 147 KKSITDYGSPEQFLSQVNYLLGKQ 170
Score = 52 (18.3 bits), Expect = 7.7e-43, Sum P(2) = 7.7e-43
Identities = 13/29 (44%), Positives = 17/29 (58%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K + G+T +EGGFD + NILE
Sbjct: 166 LLGKQAYVGETASEGGFDANAVATANILE 194
>gi|11133884|sp|O49080|PSBP_FRIAG OXYGEN-EVOLVING ENHANCER PROTEIN 2,
CHLOROPLAST PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING
SYSTEM OF PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID
MEMBRANE PROTEIN) >gi|2921508|gb|AAC04809.1| (AF037458) photosystem
II oxygen evolving complex protein 2 precursor [Fritillaria
agrestis]
Length = 264
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): ________________________
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | | 264
0 50 100 150 200 250
Plus Strand HSPs:
Score = 423 (148.9 bits), Expect = 4.3e-48, Sum P(2) = 4.3e-48
Identities = 85/124 (68%), Positives = 99/124 (79%), Frame = +2
Query: 17 KPNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAANVF 196
KP+ ++C+A QK E T VSRRLALT+LIG+AAVG+K+APA+AAYGEAANVF
Sbjct: 32 KPSQLICRA-QKSSDTDENSSTA---VSRRLALTILIGSAAVGTKIAPANAAYGEAANVF 87
Query: 197 GKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATDKN 376
GK KTNTDFL Y G+GF L IP+KWNPSKEVE+PGQVLRYEDNFD TSNV+V VT T K
Sbjct: 88 GKAKTNTDFLPYTGDGFNLLIPAKWNPSKEVEFPGQVLRYEDNFDVTSNVSVTVTPTSKK 147
Query: 377 PSLT 388
S+T
Sbjct: 148 -SIT 150
Score = 106 (37.3 bits), Expect = 4.3e-48, Sum P(2) = 4.3e-48
Identities = 20/24 (83%), Positives = 23/24 (95%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
++SITDYG+PEEFLS VDYLLGKQ
Sbjct: 146 KKSITDYGTPEEFLSTVDYLLGKQ 169
Score = 61 (21.5 bits), Expect = 2.3e-43, Sum P(2) = 2.3e-43
Identities = 14/30 (46%), Positives = 19/30 (63%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILEI 512
L K + G+T +EGGFDP + NILE+
Sbjct: 165 LLGKQAYSGKTASEGGFDPDSVATANILEV 194
>gi|11134051|sp|Q40407|PSBP_NARPS OXYGEN-EVOLVING ENHANCER PROTEIN 2,
CHLOROPLAST PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING
SYSTEM OF PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID
MEMBRANE PROTEIN) >gi|1086096|pir||S54136 OEC protein 23K -
Narcissus pseudonarcissus >gi|2147750|pir||S63532 NAD(P)H-quinone
oxidoreductase, 23K, precursor - Narcissus pseudonarcissus
>gi|780273|emb|CAA55393.1| (X78816) OEC 23kd protein [Narcissus
pseudonarcissus]
Length = 265
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): __________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | 265
0 50 100 150 200 250
Plus Strand HSPs:
Score = 393 (138.3 bits), Expect = 3.7e-45, Sum P(2) = 3.7e-45
Identities = 74/94 (78%), Positives = 85/94 (90%), Frame = +2
Query: 92 LVSRRLALTVLIGAAAVGSKVAPADAAYGEAANVFGKPKTNTDFLSYNGNGFKLSIPSKW 271
L+SRRLALT+LIG AA+GS+V+ ADAAYGE+ANVFGKPKTNTDF + G+GFK+ IPSKW
Sbjct: 54 LLSRRLALTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKW 113
Query: 272 NPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATDK 373
NPSKEVE+PGQVLRYEDNFD+TSNV VMV TDK
Sbjct: 114 NPSKEVEFPGQVLRYEDNFDTTSNVGVMVNPTDK 147
Score = 108 (38.0 bits), Expect = 3.7e-45, Sum P(2) = 3.7e-45
Identities = 21/29 (72%), Positives = 24/29 (82%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQPSLAK 456
++SI DYGSPE+FLSQVDYLLGKQ K
Sbjct: 147 KKSIKDYGSPEQFLSQVDYLLGKQAYFGK 175
Score = 61 (21.5 bits), Expect = 3.3e-40, Sum P(2) = 3.3e-40
Identities = 14/29 (48%), Positives = 19/29 (65%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K +FG+T +EGGF+P + NILE
Sbjct: 166 LLGKQAYFGKTISEGGFEPNAVRTANILE 194
>gi|625545|pir||S44030 photosystem II oxygen-evolving complex protein 2 -
common tobacco (fragment) >gi|396261|emb|CAA45700.1| (X64348) 23
kDa polypeptide of water-oxidizing complex of photosystem II
[Nicotiana tabacum]
Length = 205
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): ______________________
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | | 205
0 50 100 150 200
Plus Strand HSPs:
Score = 387 (136.2 bits), Expect = 3.3e-44, Sum P(2) = 3.3e-44
Identities = 73/92 (79%), Positives = 84/92 (91%), Frame = +2
Query: 113 LTVLIGAAAVGSKVAPADAAYGEAANVFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVE 292
LT+LIG+AA+GSKV+PADAAYGEAANVFGK KTNTDF +YNG+GFKL IPSKWNP+KEVE
Sbjct: 1 LTLLIGSAAIGSKVSPADAAYGEAANVFGKAKTNTDFQTYNGDGFKLQIPSKWNPNKEVE 60
Query: 293 YPGQVLRYEDNFDSTSNVAVMVTATDKNPSLT 388
YPGQVLR+EDNFD+TSNV V +T TDK S+T
Sbjct: 61 YPGQVLRFEDNFDATSNVIVAITPTDKK-SIT 91
Score = 105 (37.0 bits), Expect = 3.3e-44, Sum P(2) = 3.3e-44
Identities = 19/24 (79%), Positives = 24/24 (100%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
++SITD+GSPE+FLSQVDYLLG+Q
Sbjct: 87 KKSITDFGSPEQFLSQVDYLLGRQ 110
Score = 49 (17.2 bits), Expect = 2.5e-38, Sum P(2) = 2.5e-38
Identities = 11/29 (37%), Positives = 18/29 (62%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L + + G+TD+EGGF+ + N+LE
Sbjct: 106 LLGRQAYSGKTDSEGGFESDAVAIANVLE 134
>gi|7443219|pir||T02873 probable photosystem II oxygen-evolving complex protein
2 precursor - rice >gi|4079798|gb|AAC98778.1| (AF052203) 23 kDa
polypeptide of photosystem II [Oryza sativa]
Length = 254
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): _______________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | || 254
0 50 100 150 200 250
Plus Strand HSPs:
Score = 370 (130.2 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 79/121 (65%), Positives = 95/121 (78%), Frame = +2
Query: 11 STKPNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGA-AAVGSKVAPADAAYGEAA 187
+T+ + +VC+A QKQ +D VSRR AL +L GA AAVG KVAPA AAYGEAA
Sbjct: 25 ATRTHLLVCRA-QKQ------DDAD---VSRRAALALLAGATAAVGVKVAPAAAAYGEAA 74
Query: 188 NVFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTAT 367
NVFGKPKTNT+F++Y+G GFKL IPSKWNPSKE E+PGQVLRYEDNFD+ SNV+V++ T
Sbjct: 75 NVFGKPKTNTEFIAYSGEGFKLLIPSKWNPSKEREFPGQVLRYEDNFDANSNVSVIINPT 134
Query: 368 DK 373
K
Sbjct: 135 TK 136
Score = 97 (34.1 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 17/24 (70%), Positives = 24/24 (100%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
+++IT++GSPEEFL+QVD+LLGKQ
Sbjct: 136 KKTITEFGSPEEFLAQVDFLLGKQ 159
Score = 54 (19.0 bits), Expect = 4.6e-37, Sum P(2) = 4.6e-37
Identities = 13/29 (44%), Positives = 18/29 (62%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K + G+TD+EGGF+ + NILE
Sbjct: 155 LLGKQAYSGKTDSEGGFESDAVATANILE 183
>gi|2880056|gb|AAC02750.1| (AC002340) putative photosystem II oxygen-evolving
complex 23K protein [Arabidopsis thaliana]
Length = 257
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): _______________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | 257
0 50 100 150 200 250
Plus Strand HSPs:
Score = 350 (123.2 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 73/129 (56%), Positives = 90/129 (69%), Frame = +2
Query: 2 HEVSTKPNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGE 181
H ++P H+VC+A Q Q + V RRLALT+L+GAAA+GSKV+PA
Sbjct: 30 HVSLSRPVHLVCRAQQSQ-------ENNNSAVFRRLALTLLVGAAAIGSKVSPAPP---- 78
Query: 182 AANVFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVT 361
+ PK NTDFL Y G GFK+ IPSKWNPSKE+EYPGQVLR+EDNFD+TSNV+VM+T
Sbjct: 79 ---MVKPPKKNTDFLPYTGEGFKIQIPSKWNPSKEIEYPGQVLRFEDNFDATSNVSVMIT 135
Query: 362 ATDKNPSLT 388
TDK S+T
Sbjct: 136 PTDKK-SIT 143
Score = 107 (37.7 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 20/24 (83%), Positives = 24/24 (100%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
++SITDYGSPE+FLSQV+YLLGKQ
Sbjct: 139 KKSITDYGSPEQFLSQVNYLLGKQ 162
Score = 52 (18.3 bits), Expect = 9.3e-35, Sum P(2) = 9.3e-35
Identities = 13/29 (44%), Positives = 17/29 (58%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K + G+T +EGGFD + NILE
Sbjct: 158 LLGKQAYVGETASEGGFDANAVATANILE 186
>gi|131394|sp|Q00434|PSBP_WHEAT OXYGEN-EVOLVING ENHANCER PROTEIN 2, CHLOROPLAST
PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING SYSTEM OF
PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID MEMBRANE
PROTEIN) >gi|100797|pir||S22763 photosystem II oxygen-evolving
complex protein 2 precursor - wheat >gi|21837|emb|CAA40669.1|
(X57407) 23kDa oxygen evolving protein of photosystem II [Triticum
aestivum]
Length = 258
Frame 3 hits (HSPs): _______
Frame 2 hits (HSPs): ______________________
Frame 1 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | 258
0 50 100 150 200 250
__________________
Annotated Domains:
PFAM PsbP: PsbP 57..258
PRODOM PD104319: PSBP_WHEAT 1..30
PRODOM PD005326: PSBP(6) 32..89
PRODOM PD003904: PSBP(7) 91..256
__________________
Plus Strand HSPs:
Score = 359 (126.4 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40
Identities = 72/114 (63%), Positives = 87/114 (76%), Frame = +2
Query: 32 VCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAANVFGKPKT 211
VCKA QK E + SRR AL++L GAAA+ KV+PA AAYGEAANVFGK K
Sbjct: 32 VCKA-QKN---DEAASDAAVVTSRRAALSLLAGAAAIAVKVSPAAAAYGEAANVFGKAKK 87
Query: 212 NTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATDK 373
NTDF++Y+G GFKL IP+KWNPSKE E+PGQVLRYEDNFD+TSN++V++ T K
Sbjct: 88 NTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVLRYEDNFDATSNLSVIINPTTK 141
Score = 97 (34.1 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40
Identities = 18/24 (75%), Positives = 23/24 (95%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
+++ITDYGSPEEFLSQV +LLG+Q
Sbjct: 141 KKTITDYGSPEEFLSQVGFLLGQQ 164
Score = 55 (19.4 bits), Expect = 5.1e-36, Sum P(2) = 5.1e-36
Identities = 12/31 (38%), Positives = 20/31 (64%), Frame = +3
Query: 420 GLLAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
G L + ++ G+TD+EGGF+ + N+LE
Sbjct: 158 GFLLGQQSYGGKTDSEGGFESDAVATANVLE 188
>gi|7443220|pir||T03873 photosystem II oxygen-evolving complex protein 2
precursor - rice >gi|1398999|dbj|BAA08564.1| (D49713) 23 kDa
polypeptide of photosystem II [Oryza sativa]
Length = 252
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): ____________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | || 252
0 50 100 150 200 250
Plus Strand HSPs:
Score = 347 (122.2 bits), Expect = 3.6e-39, Sum P(2) = 3.6e-39
Identities = 70/95 (73%), Positives = 80/95 (84%), Frame = +2
Query: 101 RRL---ALTVLIGA-AAVGSKVAPADAAYGEAANVFGKPKTNTDFLSYNGNGFKLSIPSK 268
RRL AL +L GA AAVG KVAPA AAYGEAANVFGKPKTNT+F++Y+G GFKL IPSK
Sbjct: 41 RRLPPRALALLAGATAAVGVKVAPAAAAYGEAANVFGKPKTNTEFIAYSGEGFKLLIPSK 100
Query: 269 WNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATDK 373
WNPSKE E+PGQVLRYEDNFD+ SNV+V++ T K
Sbjct: 101 WNPSKEREFPGQVLRYEDNFDANSNVSVIINPTTK 135
Score = 97 (34.1 bits), Expect = 3.6e-39, Sum P(2) = 3.6e-39
Identities = 17/24 (70%), Positives = 24/24 (100%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
+++IT++GSPEEFL+QVD+LLGKQ
Sbjct: 135 KKTITEFGSPEEFLAQVDFLLGKQ 158
Score = 54 (19.0 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 13/29 (44%), Positives = 18/29 (62%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K + G+TD+EGGF+ + NILE
Sbjct: 154 LLGKQAYSGKTDSEGGFESDAVATANILE 182
>gi|11134091|sp|Q96334|PSBP_BRAJU OXYGEN-EVOLVING ENHANCER PROTEIN 2,
CHLOROPLAST PRECURSOR (OEE2) (23 KDA SUBUNIT OF OXYGEN EVOLVING
SYSTEM OF PHOTOSYSTEM II) (OEC 23 KDA SUBUNIT) (23 KDA THYLAKOID
MEMBRANE PROTEIN) >gi|1620920|emb|CAA70099.1| (Y08886) 23kD protein
of oxygen evolving system of photosystem II [Brassica juncea]
Length = 217
Frame 2 hits (HSPs): _________________________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | 217
0 50 100 150 200
Plus Strand HSPs:
Score = 423 (148.9 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 89/140 (63%), Positives = 108/140 (77%), Frame = +2
Query: 74 EDTTTGLVSRRLALTVLIGAAAVGSKVAPADAAYGEAANVFGKPKTNTDFLSYNGNGFKL 253
+DT+T VSRRLALT+L+GAAAVGSKV+PADAAYGEAANVFGKPKTNTDF + NG+GF++
Sbjct: 2 DDTST--VSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFTAINGDGFQV 59
Query: 254 SIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATDKNPSLTMVHLKNSYLRWITCL 433
+P+KWNPS+EVEYPGQVLRYEDNFD+TSN+ VMVT TDK S+T +L + L
Sbjct: 60 QVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKK-SITDYGSPEEFLSQVNYL 118
Query: 434 ENNLLW--PN*C*RWF*SNAVA 493
+ C F +NAVA
Sbjct: 119 LGKQAYFGETACEGGFDNNAVA 140
Score = 110 (38.7 bits), Expect = 0.00070, P = 0.00070
Identities = 21/24 (87%), Positives = 24/24 (100%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
++SITDYGSPEEFLSQV+YLLGKQ
Sbjct: 99 KKSITDYGSPEEFLSQVNYLLGKQ 122
>gi|7443218|pir||T02078 photosystem II oxygen-evolving complex protein - rice
>gi|2570499|gb|AAB82135.1| (AF022732) 23kDa polypeptide of
photosystem II [Oryza sativa]
Length = 254
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): _______________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | || 254
0 50 100 150 200 250
Plus Strand HSPs:
Score = 327 (115.1 bits), Expect = 6.5e-36, Sum P(2) = 6.5e-36
Identities = 71/121 (58%), Positives = 88/121 (72%), Frame = +2
Query: 11 STKPNHIVCKAAQKQVTVQEGEDTTTGLVSRRLALTVLIGA-AAVGSKVAPADAAYGEAA 187
+T+ + +VC+A QKQ +D SRR AL +L G AAVG VAP AAYGEAA
Sbjct: 25 ATRTHLLVCRA-QKQ------DDAD---FSRRAALALLAGTTAAVGVNVAPPAAAYGEAA 74
Query: 188 NVFGKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTAT 367
NVFGKPKTNT+F+ Y+G GFKL IPSKWNPSKE E+PGQVLRY++NF + SNV+V++
Sbjct: 75 NVFGKPKTNTEFIPYSGEGFKLLIPSKWNPSKEREFPGQVLRYKENFHADSNVSVIINPP 134
Query: 368 DK 373
K
Sbjct: 135 TK 136
Score = 86 (30.3 bits), Expect = 6.5e-36, Sum P(2) = 6.5e-36
Identities = 14/24 (58%), Positives = 22/24 (91%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
++++ ++GSP+EFL QVD+LLGKQ
Sbjct: 136 KKTVAEFGSPQEFLPQVDFLLGKQ 159
Score = 54 (19.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 13/29 (44%), Positives = 18/29 (62%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K + G+TD+EGGF+ + NILE
Sbjct: 155 LLGKQAYSGKTDSEGGFESDAVATANILE 183
>gi|8131593|dbj|BAA96364.1| (AB043961) oxygen evolving enhancer protein 2
[Bruguiera gymnorhiza]
Length = 160
Frame 3 hits (HSPs): _________
Frame 2 hits (HSPs): ____________________
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | 160
0 50 100 150
Plus Strand HSPs:
Score = 265 (93.3 bits), Expect = 8.0e-32, Sum P(2) = 8.0e-32
Identities = 49/64 (76%), Positives = 57/64 (89%), Frame = +2
Query: 197 GKPKTNTDFLSYNGNGFKLSIPSKWNPSKEVEYPGQVLRYEDNFDSTSNVAVMVTATDKN 376
GKPK NTDFL Y+G+GFKL IPSKWNPSKEVE+PGQVLRYEDNFDS S+V+V++T TDK
Sbjct: 1 GKPKENTDFLPYDGDGFKLQIPSKWNPSKEVEFPGQVLRYEDNFDSNSSVSVIITPTDKK 60
Query: 377 PSLT 388
S+T
Sbjct: 61 -SIT 63
Score = 109 (38.4 bits), Expect = 8.0e-32, Sum P(2) = 8.0e-32
Identities = 21/29 (72%), Positives = 25/29 (86%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQPSLAK 456
++SITDYGSPE+FLSQVD+LLGKQ K
Sbjct: 59 KKSITDYGSPEQFLSQVDFLLGKQAYAGK 87
Score = 67 (23.6 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 15/29 (51%), Positives = 20/29 (68%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP-MLWHCNILE 509
L K + G+T+AEGGFDP ++ NILE
Sbjct: 78 LLGKQAYAGKTEAEGGFDPDVVATANILE 106
>gi|131389|sp|P11471|PSBP_CHLRE OXYGEN-EVOLVING ENHANCER PROTEIN 2, CHLOROPLAST
PRECURSOR (OEE2) >gi|81253|pir||S00413 photosystem II
oxygen-evolving complex protein 2 precursor - Chlamydomonas
reinhardtii >gi|167428|gb|AAA33088.1| (M15187) oxygen-evolving
enhancer protein 2 [Chlamydomonas reinhardtii]
Length = 245
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): ____________________
Frame 1 hits (HSPs): ______
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 245
0 50 100 150 200
__________________
Annotated Domains:
DOMO DM07153: PHOTOSYSTEMIIOXYGEN-EVOLVINGCOM 1..244
PFAM PsbP: PsbP 42..245
PRODOM PD104326: PSBP_CHLRE 1..73
PRODOM PD003904: PSBP(7) 75..243
__________________
Plus Strand HSPs:
Score = 269 (94.7 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 52/93 (55%), Positives = 69/93 (74%), Frame = +2
Query: 95 VSRRLALTVLIGAAAVGSKVAPADAAYGEAANVFGKPKTNTDFLSYNGNGFKLSIPSKWN 274
VSRR AL GAAA+ S +PA+AAYG++ANVFGK + F+ Y G+GF L +P+KWN
Sbjct: 34 VSRRAALAGFAGAAALVSS-SPANAAYGDSANVFGKVTNKSGFVPYAGDGFALLLPAKWN 92
Query: 275 PSKEVEYPGQVLRYEDNFDSTSNVAVMVTATDK 373
PSKE ++PG +LRYEDNFD+ +N+ V+ TDK
Sbjct: 93 PSKENDFPGVILRYEDNFDAVNNLVVIAQDTDK 125
Score = 73 (25.7 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 13/24 (54%), Positives = 19/24 (79%), Frame = +1
Query: 370 QESITDYGSPEEFLSQVDYLLGKQ 441
+++I D+GS ++FL V YLLGKQ
Sbjct: 125 KKAIADFGSQDKFLESVSYLLGKQ 148
Score = 48 (16.9 bits), Expect = 7.5e-26, Sum P(2) = 7.5e-26
Identities = 9/19 (47%), Positives = 12/19 (63%), Frame = +3
Query: 426 LAWKTTFFGQTDAEGGFDP 482
L K + G+T +EGGF P
Sbjct: 144 LLGKQAYSGETQSEGGFAP 162
>gi|82498|pir||PS0187 photosystem II oxygen-evolving complex protein 2 - rice
(fragment)
Length = 37
Frame 2 hits (HSPs): ________________________________________________
__________________________________________________
Database sequence: | | | 37
0 20
Plus Strand HSPs:
Score = 156 (54.9 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 28/36 (77%), Positives = 32/36 (88%), Frame = +2
Query: 170 AYGEAANVFGKPKTNTDFLSYNGNGFKLSIPSKWNP 277
AYGEAANVFGKPKTNT+F++Y+G GFKL IP K NP
Sbjct: 1 AYGEAANVFGKPKTNTEFIAYSGEGFKLLIPKKXNP 36
>gi|81935|pir||S03271 photosystem II oxygen-evolving complex protein 2 - garden
pea (fragment)
Length = 36
Frame 2 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | | 36
0 20
Plus Strand HSPs:
Score = 154 (54.2 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 28/36 (77%), Positives = 32/36 (88%), Frame = +2
Query: 170 AYGEAANVFGKPKTNTDFLSYNGNGFKLSIPSKWNP 277
AYGEAANVFGK KTNTD+L YNG+GFKL +P+K NP
Sbjct: 1 AYGEAANVFGKAKTNTDYLPYNGDGFKLLVPAKKNP 36
>gi|280369|pir||B60484 photosystem II oxygen-evolving complex protein 1 -
western white pine (fragment)
Length = 35
Frame 2 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | | 35
0 20
Plus Strand HSPs:
Score = 128 (45.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 24/35 (68%), Positives = 27/35 (77%), Frame = +2
Query: 170 AYGEAANVFGKPKTNTDFLSYNGNGFKLSIPSKWN 274
AYGEAANVFG PK NTDF++Y+G GF L IP N
Sbjct: 1 AYGEAANVFGAPKKNTDFITYSGPGFTLQIPXGXN 35
>gi|280370|pir||A60484 photosystem II oxygen-evolving complex protein 2 -
western white pine (fragment)
Length = 24
Frame 2 hits (HSPs): ___________________________________________
__________________________________________________
Database sequence: | | | 24
0 20
Plus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.00081, P = 0.00081
Identities = 17/21 (80%), Positives = 19/21 (90%), Frame = +2
Query: 170 AYGEAANVFGKPKTNTDFLSY 232
AYGEAANVFG PK NTDF++Y
Sbjct: 1 AYGEAANVFGAPKKNTDFITY 21
>gi|2147749|pir||S63488 NAD(P)H-quinone oxidoreductase, 23K - Narcissu
pseudonarcissus (fragment)
Length = 54
Frame 2 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | 54
0 20 40
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 0.0042, P = 0.0042
Identities = 17/25 (68%), Positives = 19/25 (76%), Frame = +2
Query: 299 GQVLRYEDNFDSTSNVAVMVTATDK 373
G +YEDNFD+TSNV VMV TDK
Sbjct: 20 GDGFKYEDNFDTTSNVGVMVNPTDK 44
Score = 86 (30.3 bits), Expect = 0.0094, P = 0.0093
Identities = 18/27 (66%), Positives = 21/27 (77%), Frame = +2
Query: 170 AYGEAANVFGKPKTNTDFLSYNGNGFK 250
AYGE+ANVFG TNTDF + G+GFK
Sbjct: 1 AYGESANVFG---TNTDFQTVTGDGFK 24
>gi|81477|pir||C24166 photosystem II extrinsic membrane protein - spinach
(fragment)
Length = 17
Frame 2 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | 17
0
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 0.021, P = 0.021
Identities = 15/17 (88%), Positives = 16/17 (94%), Frame = +2
Query: 173 YGEAANVFGKPKTNTDF 223
YGEAANVFGKPK NT+F
Sbjct: 1 YGEAANVFGKPKKNTEF 17
>gi|280417|pir||S26393 photosystem II oxygen-evolving complex protein 2 - wheat
(fragment)
Length = 16
Frame 2 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | 16
0
Plus Strand HSPs:
Score = 71 (25.0 bits), Expect = 0.50, P = 0.39
Identities = 14/16 (87%), Positives = 14/16 (87%), Frame = +2
Query: 170 AYGEAANVFGKPKTNT 217
AYGEAANVFGK K NT
Sbjct: 1 AYGEAANVFGKAKKNT 16
>gi|100359|pir||S14993 photosystem II oxygen-evolving complex protein 2 -
common tobacco >gi|7489174|pir||S14995 photosystem II
oxygen-evolving complex protein 2 - common tobacco (fragment)
Length = 13
Frame 2 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | 13
0
Plus Strand HSPs:
Score = 69 (24.3 bits), Expect = 0.85, P = 0.57
Identities = 13/13 (100%), Positives = 13/13 (100%), Frame = +2
Query: 170 AYGEAANVFGKPK 208
AYGEAANVFGKPK
Sbjct: 1 AYGEAANVFGKPK 13
>gi|320590|pir||G44957 photosystem II oxygen-evolving complex protein 2 -
common tobacco (cv. Samsun NN) (fragment)
Length = 14
Frame 2 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | 14
0
Plus Strand HSPs:
Score = 68 (23.9 bits), Expect = 1.1, P = 0.66
Identities = 13/14 (92%), Positives = 13/14 (92%), Frame = +2
Query: 170 AYGEAANVFGKPKT 211
AYGEAANVFGKP T
Sbjct: 1 AYGEAANVFGKPXT 14
>gi|1076373|pir||PA0013 photosystem II oxygen-evolving complex protein 2 -
Arabidopsis thaliana (fragment)
Length = 14
Frame 2 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | 14
0
Plus Strand HSPs:
Score = 68 (23.9 bits), Expect = 1.1, P = 0.66
Identities = 13/14 (92%), Positives = 13/14 (92%), Frame = +2
Query: 170 AYGEAANVFGKPKT 211
AYG AANVFGKPKT
Sbjct: 1 AYGXAANVFGKPKT 14
>gi|58299|emb|CAA48415.1| (X68342) modified transit peptide for chloroplast
targeting of the CryIA(c) protein [synthetic construct]
Length = 89
Frame 2 hits (HSPs): ________________________________________________
__________________________________________________
Database sequence: | | | | | | 89
0 20 40 60 80
Plus Strand HSPs:
Score = 65 (22.9 bits), Expect = 2.4, P = 0.91
Identities = 23/88 (26%), Positives = 38/88 (43%), Frame = +2
Query: 92 LVSRRLALTVLIGAAAVGSKVAPADAAYGEAANVFGKPKTNTDFLSYNGNGFKLSIPSKW 271
+ S L+ ++ + A + VAP + AA + K N D S NG +++ W
Sbjct: 1 MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATR-KANNDITSITSNGGRVNCMQVW 59
Query: 272 NPSKEVEYPGQVLRY-EDNFDSTSNVAVM 355
P + ++ + L Y D DS V M
Sbjct: 60 PPIGKKKF--ETLSYLPDLTDSGGRVNCM 86
>gi|100358|pir||S14994 photosystem II oxygen-evolving complex protein 2 -
common tobacco
Length = 12
Frame 2 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | 12
0
Plus Strand HSPs:
Score = 64 (22.5 bits), Expect = 3.1, P = 0.96
Identities = 12/12 (100%), Positives = 12/12 (100%), Frame = +2
Query: 170 AYGEAANVFGKP 205
AYGEAANVFGKP
Sbjct: 1 AYGEAANVFGKP 12
>gi|6093823|sp|P81668|PSBP_PINPS OXYGEN-EVOLVING ENHANCER PROTEIN 2 (OEE2) (23
KDA SUBUNIT OF OXYGEN EVOLVING SYSTEM OF PHOTOSYSTEM II)
Length = 13
Frame 2 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | 13
0
Plus Strand HSPs:
Score = 63 (22.2 bits), Expect = 4.0, P = 0.98
Identities = 12/13 (92%), Positives = 12/13 (92%), Frame = +2
Query: 170 AYGEAANVFGKPK 208
AYGEAANVFG PK
Sbjct: 1 AYGEAANVFGAPK 13
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=6.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.337 0.142 0.475
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.324 0.136 0.424
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.346 0.152 0.637
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.358 0.157 0.639
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.339 0.146 0.511
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.337 0.142 0.454
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 171 171 10. 75 3 12 22 0.11 34
31 0.11 37
+2 0 171 171 10. 75 3 12 22 0.11 34
31 0.11 37
+1 0 171 171 10. 75 3 12 22 0.11 34
31 0.11 37
-1 0 171 171 10. 75 3 12 22 0.11 34
31 0.11 37
-2 0 171 171 10. 75 3 12 22 0.11 34
31 0.11 37
-3 0 171 171 10. 75 3 12 22 0.11 34
31 0.11 37
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 41
No. of states in DFA: 596 (59 KB)
Total size of DFA: 231 KB (256 KB)
Time to generate neighborhood: 0.01u 0.01s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 185.83u 1.20s 187.03t Elapsed: 00:00:32
Total cpu time: 185.88u 1.24s 187.12t Elapsed: 00:00:32
Start: Tue Oct 2 00:26:22 2001 End: Tue Oct 2 00:26:54 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000