R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|6729019|gb|AAF27015.1|AC009177_5 (AC009177) hypothetical protein
[Arabidopsis thaliana]
Length = 743
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | 743
0 150 300 450 600
Plus Strand HSPs:
Score = 536 (188.7 bits), Expect = 1.2e-50, P = 1.2e-50
Identities = 109/162 (67%), Positives = 126/162 (77%), Frame = +2
Query: 11 EKDFPWWCLDCVLNNRLPPRENTKCSFYLQPCEGSSVQILTQGKLSAPRILRVHKVINYV 190
EKDFP WCLD VLNNRLPPRENTK SF+L PCEGSSVQ++T GKLSAPRILRVHKV NYV
Sbjct: 582 EKDFPLWCLDAVLNNRLPPRENTKLSFFLHPCEGSSVQVVTLGKLSAPRILRVHKVTNYV 641
Query: 191 IEKMVLDKPLDSLSGDGSFAPGLTGSQSQLQAVGDGSFRSGFKPWQKLRPSIEILCNNQ- 367
+EKMVLD PLDSL+ D A ++G Q Q G+G +SG KPWQKLRPSIEILCN+Q
Sbjct: 642 VEKMVLDNPLDSLAID---AASVSGGQPQPLFSGNGLLQSGLKPWQKLRPSIEILCNSQA 698
Query: 368 -------------VLSPEMSLATVRAYIWKKSDDLVLNYQLLQSR 463
VLSP+MSLATVRAY+WKK +DL+LNY++ +R
Sbjct: 699 SQTSRDPTIALFLVLSPDMSLATVRAYVWKKPEDLILNYRVAIAR 743
>gi|11360277|pir||T47168 hypothetical protein DKFZp762E115.1 - human (fragment)
>gi|7328137|emb|CAB82402.1| (AL162064) hypothetical protein [Homo
sapiens]
Length = 191
Frame 2 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | 191
0 50 100 150
Plus Strand HSPs:
Score = 189 (66.5 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 47/142 (33%), Positives = 74/142 (52%), Frame = +2
Query: 23 PWWCLDCVLNNRLPPRENTKCSFYLQPCEGSSVQILTQGKLSAPRILRVHKVINYVIEKM 202
P W +D ++ +P + K FYLQP S + L + +LSA +L+V KV+ +V EK+
Sbjct: 61 PQWVIDITVDKNMP--KFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHVYEKI 118
Query: 203 V-LDKPLDSLSGDGSFAPGLTGSQSQLQAVGDGSFRSGFKPWQKLRPSIEILCNNQVLSP 379
+ LD + S + PG + + + + +K IE+LC +QVL P
Sbjct: 119 INLDNESQTTSSSNNEKPGEQEKEEDIAVLAE----------EK----IELLCQDQVLDP 164
Query: 380 EMSLATVRAYIWKKSDDLVLNYQ 448
M L TV+ +IWK DL L+Y+
Sbjct: 165 NMDLRTVKHFIWKSGGDLTLHYR 187
>gi|7959157|dbj|BAA95973.1| (AB040882) KIAA1449 protein [Homo sapiens]
Length = 607
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | || 607
0 150 300 450 600
Plus Strand HSPs:
Score = 189 (66.5 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 47/142 (33%), Positives = 74/142 (52%), Frame = +2
Query: 23 PWWCLDCVLNNRLPPRENTKCSFYLQPCEGSSVQILTQGKLSAPRILRVHKVINYVIEKM 202
P W +D ++ +P + K FYLQP S + L + +LSA +L+V KV+ +V EK+
Sbjct: 477 PQWVIDITVDKNMP--KFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHVYEKI 534
Query: 203 V-LDKPLDSLSGDGSFAPGLTGSQSQLQAVGDGSFRSGFKPWQKLRPSIEILCNNQVLSP 379
+ LD + S + PG + + + + +K IE+LC +QVL P
Sbjct: 535 INLDNESQTTSSSNNEKPGEQEKEEDIAVLAE----------EK----IELLCQDQVLDP 580
Query: 380 EMSLATVRAYIWKKSDDLVLNYQ 448
M L TV+ +IWK DL L+Y+
Sbjct: 581 NMDLRTVKHFIWKSGGDLTLHYR 603
>gi|6473456|dbj|BAA87136.1| (AB027832) Hypothetical protein
[Schizosaccharomyces pombe]
Length = 150
Frame 2 hits (HSPs): ______________________________________
__________________________________________________
Database sequence: | | | | 150
0 50 100
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 21/57 (36%), Positives = 36/57 (63%), Frame = +2
Query: 281 QAVGDGSFRSGFKPWQKLRPSIEILCNNQVLSPEMSLATVRAYIWKKSDDLVLNYQL 451
Q + D S+ S +K S++ C + V++P+M+LATV+A IW+ DD+V +Y +
Sbjct: 91 QKIMDYSY-SKLSQQRKDVSSLQFRCKDVVVTPKMTLATVKARIWRSGDDVVFHYDV 146
Score = 85 (29.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 20/66 (30%), Positives = 33/66 (50%), Frame = +2
Query: 11 EKDFPWWCLDCVLNNRLPPRENTKCSFYLQPCEGSSVQILTQG--KLSAPRILRVHKVIN 184
E P+W +L N P + +F LQP GS + ++ +LSA +LR K+++
Sbjct: 36 ENIMPFWLGRLLLLNEFPSKTAPTVNFTLQPFPGSGLPLIVNENTRLSASAMLRAQKIMD 95
Query: 185 YVIEKM 202
Y K+
Sbjct: 96 YSYSKL 101
>gi|7303631|gb|AAF58683.1| (AE003826) CG9062 gene product [Drosophila
melanogaster]
Length = 680
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | 680
0 150 300 450 600
Plus Strand HSPs:
Score = 148 (52.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 47/146 (32%), Positives = 74/146 (50%), Frame = +2
Query: 23 PWWCLDCVLNNRLPPRENTKCSFYLQPC-EGSSVQILTQGKLSAPRILRVHKVINYVIEK 199
P W D V+ +P + K F+LQP + + + + +L A ++ KV +V+EK
Sbjct: 530 PQWVTDVVIEKNIP--KFLKIPFFLQPHPQMTKPERTKKDRLVANEFIQCRKVCEHVLEK 587
Query: 200 MVLDKPLDSLSGDGSFAPGLTGSQSQLQAVGDGSFRSGFKPWQKLRPSIEILCNNQVLSP 379
VL+ ++ G+ L SQS A +GS P ++ IE+ CN+ V+ P
Sbjct: 588 -VLNA--ETTPSGGNANNSLQNSQSD--ANSEGSQL----PAEE---RIELWCNDVVVDP 635
Query: 380 EMSLATVRAYIWKKSDDLVLNYQLLQS 460
M L TVR +IWK+S DL Y+ Q+
Sbjct: 636 NMDLRTVRHFIWKQSTDLTFQYKTKQN 662
>gi|7500554|pir||T21810 hypothetical protein F35G12.4b - Caenorhabditis elegans
>gi|3892150|emb|CAA86338.1| (Z46242) contains similarity to Pfam
domain: PF00400 (WD domain, G-beta repeat), Score=110.8,
E-value=8.7e-30, N=6~cDNA EST yk238e2.3 comes from this gene~cDNA
EST yk283e3.3 comes from this gene~cDNA EST yk238e2.5 comes from
this gene~cDNA EST yk283e3.>
Length = 683
Frame 2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 683
0 150 300 450 600
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 18/46 (39%), Positives = 30/46 (65%), Frame = +2
Query: 311 GFKPWQKLRPSIEILCNNQVLSPEMSLATVRAYIWKKSDDLVLNYQ 448
G P ++ +E+ CN+Q L P+M L TV+ WK+S +L+L+Y+
Sbjct: 635 GSIPLNQIHTKMEMYCNDQRLEPDMDLRTVKHLYWKQSGELLLHYK 680
Score = 95 (33.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 22/69 (31%), Positives = 39/69 (56%), Frame = +2
Query: 23 PWWCLDCVLNNRLPPRENTKCSFYLQPCEGSSVQILTQGKLSAPRILRVHKVINYVIEKM 202
P W +D + N+LP + K FYL P ++ + + +LSA +L+V KV+ +V EK+
Sbjct: 571 PMWVIDAIERNQLP--KFNKMPFYLLPHPSTNPKQPKKDRLSATEMLQVKKVMEHVYEKI 628
Query: 203 VLDKPLDSL 229
+ + S+
Sbjct: 629 LSTNDVGSI 637
>gi|3123161|sp|Q20059|YPR4_CAEEL HYPOTHETICAL 77.0 KD TRP-ASP REPEATS
CONTAINING PROTEIN F35G12.4 IN CHROMOSOME III
>gi|7500553|pir||T21808 hypothetical protein F35G12.4a -
Caenorhabditis elegans >gi|3876723|emb|CAA86335.1| (Z46242)
contains similarity to Pfam domain: PF00400 (WD domain, G-beta
repeat), Score=110.8, E-value=8.7e-30, N=6~cDNA EST EMBL:Z14703
comes from this gene~cDNA EST yk53f6.5 comes from this gene~cDNA
EST yk59c8.5 comes from this gene~cDNA EST yk53f6.3>
Length = 686
Frame 2 hits (HSPs): _________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 686
0 150 300 450 600
__________________
Annotated Domains:
BLOCKS BL00678: Trp-Asp (WD) repeat proteins pr 107..117
Entrez Repetitive region: WD1. 27..57
Entrez Repetitive region: WD2. 88..118
Entrez Repetitive region: WD3. 133..163
Entrez Repetitive region: WD4. 176..206
Entrez Repetitive region: WD5. 218..248
Entrez Repetitive region: WD6. 260..290
PFAM WD40: WD domain, G-beta repeat 20..57
PFAM WD40: WD domain, G-beta repeat 80..118
PFAM WD40: WD domain, G-beta repeat 128..163
PFAM WD40: WD domain, G-beta repeat 168..206
PFAM WD40: WD domain, G-beta repeat 210..248
PFAM WD40: WD domain, G-beta repeat 252..293
PRINTS GPROTEINBRPT1: G-protein beta repeat mot 44..58
PRINTS GPROTEINBRPT2: G-protein beta repeat mot 105..119
PRINTS GPROTEINBRPT3: G-protein beta repeat mot 235..249
PRODOM PD060868: YPR4_CAEEL 1..83
PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 85..118
PRODOM PD172415: YPR4_CAEEL 120..214
PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 216..248
PRODOM PD011815: Q99247(2) YA4E(2) YPR4(2) 252..506
PRODOM PD141054: YPR4_CAEEL 508..595
PRODOM PD011815: Q99247(2) YA4E(2) YPR4(2) 597..682
PROSITE G_BETA_REPEATS: Beta-transducin family T 105..119
PROSITE G_BETA_REPEATS: Beta-transducin family T 235..249
__________________
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 18/46 (39%), Positives = 30/46 (65%), Frame = +2
Query: 311 GFKPWQKLRPSIEILCNNQVLSPEMSLATVRAYIWKKSDDLVLNYQ 448
G P ++ +E+ CN+Q L P+M L TV+ WK+S +L+L+Y+
Sbjct: 638 GSIPLNQIHTKMEMYCNDQRLEPDMDLRTVKHLYWKQSGELLLHYK 683
Score = 93 (32.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 21/61 (34%), Positives = 36/61 (59%), Frame = +2
Query: 23 PWWCLDCVLNNRLPPRENTKCSFYLQPCEGSSVQILTQGKLSAPRILRVHKVINYVIEKM 202
P W +D + N+LP + K FYL P ++ + + +LSA +L+V KV+ +V EK+
Sbjct: 571 PMWVIDAIERNQLP--KFNKMPFYLLPHPSTNPKQPKKDRLSATEMLQVKKVMEHVYEKI 628
Query: 203 V 205
+
Sbjct: 629 L 629
>gi|1175408|sp|Q09731|YA4E_SCHPO HYPOTHETICAL 107.3 KD TRP-ASP REPEATS
CONTAINING PROTEIN C31A2.14 IN CHROMOSOME I >gi|2130425|pir||S58107
hypothetical WD-40 repeat protein - fission yeast
(Schizosaccharomyces pombe) >gi|914892|emb|CAA90472.1| (Z50113)
Hypothetical WD-40 repeat protein [Schizosaccharomyces pombe]
Length = 962
Frame 2 hits (HSPs): _______
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | | | 962
0 150 300 450 600 750 900
__________________
Annotated Domains:
BLOCKS BL00678: Trp-Asp (WD) repeat proteins pr 233..243
DOMO DM00155: BETA-TRANSDUCINFAMILYTRP-ASPREP 43..60
DOMO DM00005: BETA-TRANSDUCINFAMILYTRP-ASPREP 67..111
DOMO DM00005: BETA-TRANSDUCINFAMILYTRP-ASPREP 204..247
PFAM WD40: WD domain, G-beta repeat 69..107
PFAM WD40: WD domain, G-beta repeat 113..153
PFAM WD40: WD domain, G-beta repeat 206..244
PRINTS GPROTEINBRPT1: G-protein beta repeat mot 47..61
PRINTS GPROTEINBRPT2: G-protein beta repeat mot 94..108
PRINTS GPROTEINBRPT3: G-protein beta repeat mot 140..154
PRODOM PD000061: PEX7(6) WD66(5) CORO(5) 20..105
PRODOM PD064261: YA4E_SCHPO 107..210
PRODOM PD000018: GBLP(92) GBB(40) GBB1(28) 212..244
PRODOM PD011815: Q99247(2) YA4E(2) YPR4(2) 248..522
PRODOM PD141055: YA4E_SCHPO 524..763
PRODOM PD011815: Q99247(2) YA4E(2) YPR4(2) 765..942
PROSITE G_BETA_REPEATS: Beta-transducin family T 47..61
__________________
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 21/57 (36%), Positives = 36/57 (63%), Frame = +2
Query: 281 QAVGDGSFRSGFKPWQKLRPSIEILCNNQVLSPEMSLATVRAYIWKKSDDLVLNYQL 451
Q + D S+ S +K S++ C + V++P+M+LATV+A IW+ DD+V +Y +
Sbjct: 890 QKIMDYSY-SKLSQQRKDVSSLQFRCKDVVVTPKMTLATVKARIWRSGDDVVFHYDV 945
Score = 85 (29.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 20/66 (30%), Positives = 33/66 (50%), Frame = +2
Query: 11 EKDFPWWCLDCVLNNRLPPRENTKCSFYLQPCEGSSVQILTQG--KLSAPRILRVHKVIN 184
E P+W +L N P + +F LQP GS + ++ +LSA +LR K+++
Sbjct: 835 ENIMPFWLGRLLLLNEFPSKTAPTVNFTLQPFPGSGLPLIVNENTRLSASAMLRAQKIMD 894
Query: 185 YVIEKM 202
Y K+
Sbjct: 895 YSYSKL 900
>gi|6324485 ref|NP_014554.1| Yol087cp [Saccharomyces cerevisiae]
>gi|1362357|pir||S57382 hypothetical protein YOL087c - yeast
(Saccharomyces cerevisiae) >gi|600471|emb|CAA58192.1| (X83121) orf
00944 [Saccharomyces cerevisiae] >gi|1419928|emb|CAA99099.1|
(Z74829) ORF YOL087c [Saccharomyces cerevisiae]
Length = 1116
Frame 2 hits (HSPs): ___ ___
Frame 1 hits (HSPs): _
__________________________________________________
Database sequence: | | | | | | | | | 1116
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 98 (34.5 bits), Expect = 0.34, Sum P(2) = 0.29
Identities = 19/42 (45%), Positives = 27/42 (64%), Frame = +2
Query: 329 KLRPSI--EILCNNQVLSPEMSLATVRAYIWKKSDDLVLNYQ 448
K+ PS+ ++LC QVL +M+L TVR WK D+VL Y+
Sbjct: 1057 KMEPSLWLDLLCRGQVLDNDMTLNTVRTLYWKSQGDIVLEYR 1098
Score = 40 (14.1 bits), Expect = 0.34, Sum P(2) = 0.29
Identities = 6/9 (66%), Positives = 6/9 (66%), Frame = +1
Query: 286 SWGWIFSIW 312
SW W SIW
Sbjct: 316 SWSWDSSIW 324
Score = 40 (14.1 bits), Expect = 0.34, Sum P(2) = 0.29
Identities = 7/31 (22%), Positives = 14/31 (45%), Frame = +2
Query: 11 EKDFPWWCLDCVLNNRLPPRENTKCSFYLQP 103
E++ P+W + + E K +F + P
Sbjct: 915 EENLPYWFAKALFRDIKTVEEQPKLNFLIMP 945
>gi|141533|sp|P04316|YVDH_VACCV HYPOTHETICAL 7.2 KD PROTEIN
>gi|74337|pir||QQVZ20 hypothetical protein A-61 - vaccinia virus
(strain WR) >gi|335657|gb|AAA48269.1| (M15058) ORFd cds [Vaccinia
virus]
Length = 61
Frame -1 hits (HSPs): _____________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 61
0 20 40 60
__________________
Annotated Domains:
PRODOM PD052971: YVDH_VACCV 1..60
__________________
Minus Strand HSPs:
Score = 64 (22.5 bits), Expect = 3.4, P = 0.97
Identities = 16/36 (44%), Positives = 21/36 (58%), Frame = -1
Query: 116 KSLHMVANRNCI*YFLWEVTDYSKHSPGTTRGSLSH 9
K L +V N+N I +LW V++YS H P SL H
Sbjct: 26 KILIIVINKNTILRYLWSVSEYSVH-PRIFYQSLFH 60
>gi|7465695|pir||T33721 phosphopyruvate hydratase (EC 4.2.1.11) eno - Zymomonas
mobilis >gi|3089611|gb|AAC70360.1| (AF086791) enolase [Zymomonas
mobilis]
Length = 377
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 377
0 150 300
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 6.3, P = 1.0
Identities = 20/75 (26%), Positives = 37/75 (49%), Frame = +2
Query: 101 PCEGSSVQILTQGKLSAPRILRVHKVINYVIEKMVLDKPLDSLSGD-GSFAPGLTGSQSQ 277
P + I G S +R+ +++ ++K + K +++ GD G FAP L + S
Sbjct: 159 PIDFQEFMIAPVGASSINEAVRIGTEVSHTLKKELSAKGMNTNVGDEGGFAPSLDSASSA 218
Query: 278 LQAVGDGSFRSGFKP 322
L + D ++G+KP
Sbjct: 219 LDFIVDSISKAGYKP 233
>gi|10176180|dbj|BAB07275.1| (AP001519) enolase (2-phosphoglycerate
dehydratase) [Bacillus halodurans]
Length = 429
Frame 2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 429
0 150 300
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 9.9, P = 1.0
Identities = 19/77 (24%), Positives = 43/77 (55%), Frame = +2
Query: 125 ILTQGKLSAPRILRVHKVINYVIEKMVLDKPLDSLSGD-GSFAPGLTGSQSQLQAVGDGS 301
I+ G S LR I + ++K++ K ++ GD G FAP L+ ++ LQ + +
Sbjct: 166 IMPVGAESFKEALRTGTEIFHSLKKVLKSKGYNTAVGDEGGFAPNLSSNEEALQTIIEAI 225
Query: 302 FRSGFKPWQKLRPSIEI 352
++G+ P ++++ ++++
Sbjct: 226 EQAGYTPGEQVKLAMDV 242
>gi|2118305|pir||A41835 phosphopyruvate hydratase (EC 4.2.1.11) - Bacillus
subtilis >gi|460259|gb|AAA21681.1| (L29475) enolase [Bacillus
subtilis]
Length = 430
Frame 2 hits (HSPs): __________
Annotated Domains: __
__________________________________________________
Database sequence: | | | | 430
0 150 300
__________________
Annotated Domains:
PROSITE ENOLASE: Enolase signature. 314..321
__________________
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 9.9, P = 1.0
Identities = 20/76 (26%), Positives = 43/76 (56%), Frame = +2
Query: 125 ILTQGKLSAPRILRVHKVINYVIEKMVLDKPLDSLSGD-GSFAPGLTGSQSQLQAVGDGS 301
I+ G + LR+ I + ++ ++ K L++ GD G FAP L ++ LQ + +
Sbjct: 167 IMPVGAPNFREALRMGAQIFHSLKSVLSAKGLNTAVGDEGGFAPNLGSNEEALQTIVEAI 226
Query: 302 FRSGFKPWQKLRPSIE 349
++GFKP ++++ +++
Sbjct: 227 EKAGFKPGEEVKLAMD 242
>gi|6166147|sp|P37869|ENO_BACSU ENOLASE (2-PHOSPHOGLYCERATE DEHYDRATASE)
(2-PHOSPHO-D-GLYCERATE HYDRO-LYASE) >gi|7436878|pir||B69620
phosphopyruvate hydratase (EC 4.2.1.11) [validated] - Bacillus
subtilis >gi|2635903|emb|CAB15395.1| (Z99121) enolase [Bacillus
subtilis]
Length = 430
Frame 2 hits (HSPs): __________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 430
0 150 300
__________________
Annotated Domains:
DOMO DM00487: ENOLASE 2..427
Entrez active site: BY SIMILARITY. 155
Entrez metal-binding site: MAGNESIUM (BY SIMILA 242
Entrez metal-binding site: MAGNESIUM (BY SIMILA 287
Entrez metal-binding site: MAGNESIUM (BY SIMILA 314
PFAM enolase: Enol-ase 2..428
PRINTS ENOLASE1: Enolase motif I - 2 37..51
PRINTS ENOLASE2: Enolase motif II - 2 107..123
PRINTS ENOLASE3: Enolase motif III - 2 161..174
PRINTS ENOLASE4: Enolase motif IV - 2 313..324
PRINTS ENOLASE5: Enolase motif V - 2 336..350
PRINTS ENOLASE6: Enolase motif VI - 2 365..382
PRODOM PD000902: ENO(41) ENO1(5) ENOA(5) 4..422
PROSITE ENOLASE: Enolase signature. 314..321
__________________
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 9.9, P = 1.0
Identities = 20/76 (26%), Positives = 43/76 (56%), Frame = +2
Query: 125 ILTQGKLSAPRILRVHKVINYVIEKMVLDKPLDSLSGD-GSFAPGLTGSQSQLQAVGDGS 301
I+ G + LR+ I + ++ ++ K L++ GD G FAP L ++ LQ + +
Sbjct: 167 IMPVGAPNFREALRMGAQIFHSLKSVLSAKGLNTAVGDEGGFAPNLGSNEEALQTIVEAI 226
Query: 302 FRSGFKPWQKLRPSIE 349
++GFKP ++++ +++
Sbjct: 227 EKAGFKPGEEVKLAMD 242
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.97
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.357 0.161 0.592
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.327 0.140 0.444
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.367 0.162 0.667
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.348 0.151 0.518
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.366 0.164 0.606
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.340 0.147 0.496
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 181 181 10. 76 3 12 22 0.12 34
31 0.12 37
+2 0 181 180 10. 76 3 12 22 0.11 34
31 0.12 37
+1 0 181 180 10. 76 3 12 22 0.11 34
31 0.12 37
-1 0 181 180 10. 76 3 12 22 0.11 34
31 0.12 37
-2 0 181 180 10. 76 3 12 22 0.11 34
31 0.12 37
-3 0 181 180 10. 76 3 12 22 0.11 34
31 0.12 37
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 14
No. of states in DFA: 592 (58 KB)
Total size of DFA: 212 KB (256 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 175.51u 0.76s 176.27t Elapsed: 00:01:31
Total cpu time: 175.55u 0.78s 176.33t Elapsed: 00:01:31
Start: Wed Jan 16 20:22:41 2002 End: Wed Jan 16 20:24:12 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000