R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|7487587|pir||T08918 hypothetical protein T32A16.160 - Arabidopsis thaliana
>gi|4972103|emb|CAB43899.1| (AL078468) cellulose synthase catalytic
subunit-like protein [Arabidopsis thaliana]
>gi|7269248|emb|CAB81317.1| (AL161560) cellulose synthase catalytic
subunit-like protein [Arabidopsis thaliana]
Length = 689
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | 689
0 150 300 450 600
Plus Strand HSPs:
Score = 218 (76.7 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 53/153 (34%), Positives = 79/153 (51%), Frame = +1
Query: 7 MGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCEY 186
+GYC Y WA SLP + Y F+ + LL +FP+ S W + FL YG L ++
Sbjct: 474 VGYCQYACWAFWSLPLIVYGFLPQLALLYQSSVFPKSSDPWFWLYIVLFLGAYGQDLLDF 533
Query: 187 LICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVVTKDVQREVL 366
++ G T GWWN QR+ I +S+LFGFI+ K L LS F +T K + Q +
Sbjct: 534 VLEGGTYGGWWNDQRMWSIRGFSSHLFGFIEFTLKTLNLSTHGFNVTSKANDDEEQSKRY 593
Query: 367 SKKFI*IWKLFQSCLTHI*LQ-LALLNLFGLLLG 465
K+ I++ S + L +A++NL + G
Sbjct: 594 EKE---IFEFGPSSSMFLPLTTVAIVNLLAFVWG 624
>gi|2262116|gb|AAB63624.1| (AC002343) cellulose synthase isolog [Arabidopsis
thaliana]
Length = 747
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | 747
0 150 300 450 600
Plus Strand HSPs:
Score = 218 (76.7 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 53/153 (34%), Positives = 79/153 (51%), Frame = +1
Query: 7 MGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCEY 186
+GYC Y WA SLP + Y F+ + LL +FP+ S W + FL YG L ++
Sbjct: 532 VGYCQYACWAFWSLPLIVYGFLPQLALLYQSSVFPKSSDPWFWLYIVLFLGAYGQDLLDF 591
Query: 187 LICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVVTKDVQREVL 366
++ G T GWWN QR+ I +S+LFGFI+ K L LS F +T K + Q +
Sbjct: 592 VLEGGTYGGWWNDQRMWSIRGFSSHLFGFIEFTLKTLNLSTHGFNVTSKANDDEEQSKRY 651
Query: 367 SKKFI*IWKLFQSCLTHI*LQ-LALLNLFGLLLG 465
K+ I++ S + L +A++NL + G
Sbjct: 652 EKE---IFEFGPSSSMFLPLTTVAIVNLLAFVWG 682
>gi|7487589|pir||T08920 hypothetical protein T32A16.180 - Arabidopsis thaliana
>gi|4972105|emb|CAB43901.1| (AL078468) putative protein
[Arabidopsis thaliana] >gi|7269250|emb|CAB81319.1| (AL161560)
putative protein [Arabidopsis thaliana]
Length = 727
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 727
0 150 300 450 600
Plus Strand HSPs:
Score = 198 (69.7 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 41/118 (34%), Positives = 60/118 (50%), Frame = +1
Query: 7 MGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCEY 186
+GYCN S+P Y + + L+ G+ +FP+ S W + F Y L ++
Sbjct: 484 LGYCNSPFKPFWSIPLTVYGLLPQLALISGVSVFPKASDPWFWLYIILFFGAYAQDLSDF 543
Query: 187 LICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVVTKDVQRE 360
L+ G T WWN QR+ I +S+ FGFI+ + K L LS KF +T K D QR+
Sbjct: 544 LLEGGTYRKWWNDQRMLMIKGLSSFFFGFIEFILKTLNLSTPKFNVTSKANDDDEQRK 601
>gi|2262114|gb|AAB63622.1| (AC002343) cellulose synthase isolog [Arabidopsis
thaliana]
Length = 770
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | | 770
0 150 300 450 600 750
Plus Strand HSPs:
Score = 198 (69.7 bits), Expect = 9.5e-14, P = 9.5e-14
Identities = 41/118 (34%), Positives = 60/118 (50%), Frame = +1
Query: 7 MGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCEY 186
+GYCN S+P Y + + L+ G+ +FP+ S W + F Y L ++
Sbjct: 527 LGYCNSPFKPFWSIPLTVYGLLPQLALISGVSVFPKASDPWFWLYIILFFGAYAQDLSDF 586
Query: 187 LICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVVTKDVQRE 360
L+ G T WWN QR+ I +S+ FGFI+ + K L LS KF +T K D QR+
Sbjct: 587 LLEGGTYRKWWNDQRMLMIKGLSSFFFGFIEFILKTLNLSTPKFNVTSKANDDDEQRK 644
>gi|7487588|pir||T08919 hypothetical protein T32A16.170 - Arabidopsis thaliana
>gi|4972104|emb|CAB43900.1| (AL078468) putative protein
[Arabidopsis thaliana] >gi|7269249|emb|CAB81318.1| (AL161560)
putative protein [Arabidopsis thaliana]
Length = 686
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 686
0 150 300 450 600
Plus Strand HSPs:
Score = 191 (67.2 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 35/109 (32%), Positives = 56/109 (51%), Frame = +1
Query: 7 MGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCEY 186
+GYC+Y W +P + Y + + L+ G+ +FP+ S W + FL Y L ++
Sbjct: 471 LGYCHYAFWPFWCIPLVVYGILPQVALIHGVSVFPKASDPWFWLYIILFLGGYAQDLSDF 530
Query: 187 LICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDK 333
L+ G T WWN QR+ + +S+ FGF + K L LS + +T K
Sbjct: 531 LLEGGTYRKWWNDQRMWMVRGLSSFFFGFTEFTLKTLNLSTQGYNVTSK 579
>gi|2262115|gb|AAB63623.1| (AC002343) cellulose synthase isolog [Arabidopsis
thaliana]
Length = 730
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 730
0 150 300 450 600
Plus Strand HSPs:
Score = 191 (67.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 35/109 (32%), Positives = 56/109 (51%), Frame = +1
Query: 7 MGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCEY 186
+GYC+Y W +P + Y + + L+ G+ +FP+ S W + FL Y L ++
Sbjct: 515 LGYCHYAFWPFWCIPLVVYGILPQVALIHGVSVFPKASDPWFWLYIILFLGGYAQDLSDF 574
Query: 187 LICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDK 333
L+ G T WWN QR+ + +S+ FGF + K L LS + +T K
Sbjct: 575 LLEGGTYRKWWNDQRMWMVRGLSSFFFGFTEFTLKTLNLSTQGYNVTSK 623
>gi|7484865|pir||T02552 cellulose synthase homolog T26B15.9 - Arabidopsis
thaliana >gi|3298541|gb|AAC25935.1| (AC004681) putative cellulose
synthase [Arabidopsis thaliana]
Length = 712
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 712
0 150 300 450 600
Plus Strand HSPs:
Score = 142 (50.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 35/113 (30%), Positives = 52/113 (46%), Frame = +1
Query: 7 MGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCEY 186
+ Y W S+P L Y + CLL LFP+ + ++ Y SL E+
Sbjct: 489 LAYLYIFTWGLRSIPELIYCLLPAYCLLHNAALFPKGVYLGIVVTLVGMHCLY--SLWEF 546
Query: 187 LICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVVTK 345
+ G + W+ Q I T S+LF D + K LG+S+T FI+T K + K
Sbjct: 547 MSLGFSVQSWFASQSFWRIKTTCSWLFSIPDIILKLLGISKTVFIVTKKTMPK 599
>gi|7484862|pir||T02553 cellulose synthase homolog T26B15.10 - Arabidopsis
thaliana >gi|3298542|gb|AAC25936.1| (AC004681) putative cellulose
synthase [Arabidopsis thaliana]
Length = 755
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | || 755
0 150 300 450 600 750
Plus Strand HSPs:
Score = 137 (48.2 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 33/111 (29%), Positives = 52/111 (46%), Frame = +1
Query: 7 MGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCEY 186
+ Y W S+P L Y + CLL LFP+ + ++ Y +L E+
Sbjct: 532 LAYLYVFSWGLRSIPELFYCLLPAYCLLHNSALFPKGVYLGIIITLVGIHCLY--TLWEF 589
Query: 187 LICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVV 339
+ G + W+ Q I T S+LF +D + K LG+S+T FI+T K +
Sbjct: 590 MNLGFSIQSWYVTQSFGRIKTTCSWLFSVLDVILKLLGISKTVFIVTKKTM 640
>gi|7484715|pir||T10800 cellulose synthase (EC 2.4.1.-) catalytic chain celA2 -
upland cotton (fragment) >gi|1706958|gb|AAB37767.1| (U58284)
cellulose synthase [Gossypium hirsutum]
Length = 685
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 685
0 150 300 450 600
Plus Strand HSPs:
Score = 127 (44.7 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 31/110 (28%), Positives = 52/110 (47%), Frame = +1
Query: 4 QMGYCNYLLWAPMSLPTLCYVFVSPICLLRG---IPLFPQLSSIWVLPFAYAFLATYGFS 174
++ Y N +++ S+P L Y + +CLL G IP L+S+W L + +AT
Sbjct: 456 RLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLSNLTSVWFLALFLSIIAT---G 512
Query: 175 LCEYLICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDK 333
+ E G + WW ++ I +++LF + K L T F +T K
Sbjct: 513 VLELRWSGVSIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAK 565
>gi|7484863|pir||T02560 cellulose synthase homolog T26B15.17 - Arabidopsis
thaliana >gi|3298549|gb|AAC25943.1| (AC004681) putative cellulose
synthase [Arabidopsis thaliana]
Length = 748
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 748
0 150 300 450 600
Plus Strand HSPs:
Score = 126 (44.4 bits), Expect = 0.00014, P = 0.00014
Identities = 33/99 (33%), Positives = 47/99 (47%), Frame = +1
Query: 43 SLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCEYLICGSTANGWWN 222
S+P L Y + CLL LFP+ + + Y +L E++ G + W
Sbjct: 535 SIPELIYCLLPAYCLLHNSTLFPKGLYLGITVTLVGIHCLY--TLWEFMSLGYSVQSWLV 592
Query: 223 LQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVV 339
Q + I T+S+LF D K LG+S+T FIIT K V
Sbjct: 593 SQSVWRIVATSSWLFSIFDITLKLLGISETVFIITKKTV 631
>gi|4432865|gb|AAD20713.1| (AC006300) putative cellulose synthase catalytic
subunit [Arabidopsis thaliana]
Length = 1065
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | || 1065
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 0.00037, P = 0.00037
Identities = 27/115 (23%), Positives = 51/115 (44%), Frame = +1
Query: 4 QMGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCE 183
++ Y N +++ S+P L Y + CL+ + P++S++ L F F + Y ++ E
Sbjct: 837 RIAYINTIVYPITSIPLLAYCMLPAFCLITNTFIIPEISNLASLCFMLLFASIYASAILE 896
Query: 184 YLICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVVTKD 348
WW ++ I T+++LF + K T F +T K +D
Sbjct: 897 LKWSDVALEDWWRNEQFWVIGGTSAHLFAVFQGLLKVFAGIDTNFTVTSKASDED 951
>gi|2827143|gb|AAC39336.1| (AF027174) cellulose synthase catalytic subunit
[Arabidopsis thaliana]
Length = 1065
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | || 1065
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 120 (42.2 bits), Expect = 0.0012, P = 0.0012
Identities = 29/115 (25%), Positives = 51/115 (44%), Frame = +1
Query: 4 QMGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCE 183
+ Y N ++ S+P L Y + +CL + PQ+S+I + F FL+ + + E
Sbjct: 835 RFAYVNTTIYPITSIPLLMYCTLLAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILE 894
Query: 184 YLICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVVTKD 348
G + WW ++ I +++LF + K L T F +T K +D
Sbjct: 895 MRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDED 949
>gi|7484864|pir||T02561 cellulose synthase homolog T26B15.18 - Arabidopsis
thaliana >gi|3298550|gb|AAC25944.1| (AC004681) putative cellulose
synthase [Arabidopsis thaliana]
Length = 757
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | || 757
0 150 300 450 600 750
Plus Strand HSPs:
Score = 118 (41.5 bits), Expect = 0.0014, P = 0.0014
Identities = 29/99 (29%), Positives = 47/99 (47%), Frame = +1
Query: 43 SLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCEYLICGSTANGWWN 222
S+P L Y + CLL LFP+ + + Y +L E++ G + W+
Sbjct: 543 SIPELIYCLLPAYCLLHNSALFPKGLCLGITMLLAGMHCLY--TLWEFMCLGHSIQSWYV 600
Query: 223 LQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVV 339
Q I T+S+LF D + K LGLS+ F+++ K +
Sbjct: 601 SQSFWRIVATSSWLFSIFDIILKLLGLSKNVFLVSKKTM 639
>gi|7484861|pir||T05351 cellulose synthase (EC 2.4.1.-) catalytic chain RSW1 -
Arabidopsis thaliana >gi|2827139|gb|AAC39334.1| (AF027172)
cellulose synthase catalytic subunit [Arabidopsis thaliana]
>gi|4049343|emb|CAA22568.1| (AL034567) cellulose synthase catalytic
subunit (RSW1) [Arabidopsis thaliana] >gi|7270145|emb|CAB79958.1|
(AL161581) cellulose synthase catalytic subunit (RSW1) [Arabidopsis
thaliana]
Length = 1081
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | | | | 1081
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 119 (41.9 bits), Expect = 0.0016, P = 0.0016
Identities = 34/154 (22%), Positives = 67/154 (43%), Frame = +1
Query: 4 QMGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCE 183
++ Y N +++ S+P + Y + CL+ + P++S+ + F F++ + E
Sbjct: 850 RIAYINTIVYPITSIPLIAYCILPAFCLITDRFIIPEISNYASIWFILLFISIAVTGILE 909
Query: 184 YLICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVVTKDVQREV 363
G + WW ++ I T+++LF + K L T F +T K +D
Sbjct: 910 LRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKATDEDGD--- 966
Query: 364 LSKKFI*IWKLFQSCLTHI*LQLALLNLFGLLLG 465
++ +I W T + L+NL G++ G
Sbjct: 967 FAELYIFKWTALLIPPTTV----LLVNLIGIVAG 996
>gi|7484859|pir||T08583 cellulose synthase (EC 2.4.1.-) catalytic chain -
Arabidopsis thaliana >gi|2827141|gb|AAC39335.1| (AF027173)
cellulose synthase catalytic subunit [Arabidopsis thaliana]
>gi|4914447|emb|CAB43650.1| (AL050351) cellulose synthase catalytic
subunit (Ath-A) [Arabidopsis thaliana] >gi|7270919|emb|CAB80598.1|
(AL161595) cellulose synthase catalytic subunit (Ath-A)
[Arabidopsis thaliana]
Length = 1084
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | | | | 1084
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 117 (41.2 bits), Expect = 0.0028, P = 0.0028
Identities = 36/154 (23%), Positives = 66/154 (42%), Frame = +1
Query: 4 QMGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCE 183
+ Y N +++ SLP + Y + +CLL G + P++S+ + F F++ + E
Sbjct: 854 RFSYINSVVYPWTSLPLIVYCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILE 913
Query: 184 YLICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVVTKDVQREV 363
G + WW ++ I +S+LF + K L T F +T K
Sbjct: 914 MQWGGVGIDDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGA---- 969
Query: 364 LSKKFI*IWKLFQSCLTHI*LQLALLNLFGLLLG 465
S+ +I W T L ++N+ G+++G
Sbjct: 970 FSELYIFKWTTLLIPPT----TLLIINIIGVIVG 999
>gi|4886756|gb|AAD32031.1|AF088917_1 (AF088917) cellulose synthase catalytic
subunit [Arabidopsis thaliana]
Length = 1026
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | | | | 1026
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 116 (40.8 bits), Expect = 0.0034, P = 0.0034
Identities = 31/125 (24%), Positives = 54/125 (43%), Frame = +1
Query: 4 QMGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCE 183
+ Y N ++ S+P L Y + ICLL + P +S+ L F F++ + E
Sbjct: 797 RFAYANTTIYPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILE 856
Query: 184 YLICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVVTKDVQREV 363
G + WW ++ I +++LF + + K L T F +T K D E+
Sbjct: 857 LRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGEL 916
Query: 364 LSKKF 378
+ K+
Sbjct: 917 YAFKW 921
>gi|5230423|gb|AAD40885.1|AF091713_1 (AF091713) cellulose synthase catalytic
subunit [Arabidopsis thaliana]
Length = 1026
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | | | | 1026
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 116 (40.8 bits), Expect = 0.0034, P = 0.0034
Identities = 31/125 (24%), Positives = 54/125 (43%), Frame = +1
Query: 4 QMGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCE 183
+ Y N ++ S+P L Y + ICLL + P +S+ L F F++ + E
Sbjct: 797 RFAYANTTIYPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILE 856
Query: 184 YLICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVVTKDVQREV 363
G + WW ++ I +++LF + + K L T F +T K D E+
Sbjct: 857 LRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGEL 916
Query: 364 LSKKF 378
+ K+
Sbjct: 917 YAFKW 921
>gi|6446577|gb|AAD39534.2| (AF150630) cellulose synthase catalytic subunit
[Gossypium hirsutum]
Length = 1067
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | || 1067
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 116 (40.8 bits), Expect = 0.0035, P = 0.0035
Identities = 27/115 (23%), Positives = 52/115 (45%), Frame = +1
Query: 4 QMGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCE 183
+ Y N ++ ++P L Y + +CLL + PQ+S++ + F FL+ + + +
Sbjct: 837 RFAYVNTTIYPVTAIPLLMYCTLPAVCLLTNKFIIPQISNLASIWFISLFLSIFATGILK 896
Query: 184 YLICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVVTKD 348
G + WW ++ I +++LF + K L T F +T K +D
Sbjct: 897 MKWNGVGIDQWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 951
>gi|4417271|gb|AAD20396.1| (AC007019) putative cellulose synthase catalytic
subunit [Arabidopsis thaliana]
Length = 1088
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | | | | 1088
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 110 (38.7 bits), Expect = 0.019, P = 0.019
Identities = 38/154 (24%), Positives = 67/154 (43%), Frame = +1
Query: 4 QMGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCE 183
+ Y N +++ SLP L Y + ICLL G + P++S+ + F F++ + E
Sbjct: 858 RFSYINSVVYPWTSLPLLVYCSLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILE 917
Query: 184 YLICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVVTKDVQREV 363
+ WW ++ I +S+LF + K L T F +T K D +
Sbjct: 918 MQWGKIGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAAD-DGE--- 973
Query: 364 LSKKFI*IWKLFQSCLTHI*LQLALLNLFGLLLG 465
S+ +I W T L ++N+ G+++G
Sbjct: 974 FSELYIFKWTSLLIPPT----TLLIINIVGVIVG 1003
>gi|7484714|pir||T10797 cellulose synthase (EC 2.4.1.-) catalytic chain celA1 -
upland cotton >gi|1706956|gb|AAB37766.1| (U58283) cellulose
synthase [Gossypium hirsutum]
Length = 974
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | | 974
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 107 (37.7 bits), Expect = 0.037, P = 0.037
Identities = 29/110 (26%), Positives = 50/110 (45%), Frame = +1
Query: 4 QMGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCE 183
++ Y N +++ SLP + Y + ICLL G + P LS++ + F FL+ ++ E
Sbjct: 743 RLAYINTIVYPFTSLPLIAYCSLPAICLLTGKFIIPTLSNLASVLFLGLFLSIIVTAVLE 802
Query: 184 YLICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDK 333
G + W ++ I +++LF K L T F +T K
Sbjct: 803 LRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAK 852
>gi|4115905|gb|AAD03417.1| (AF072131) secondary xylem cellulose synthase
[Populus tremuloides]
Length = 978
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | | 978
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 107 (37.7 bits), Expect = 0.037, P = 0.037
Identities = 27/110 (24%), Positives = 50/110 (45%), Frame = +1
Query: 4 QMGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCE 183
++ Y N +++ SLP + Y + +CLL G + P LS++ + F F++ ++ E
Sbjct: 748 RLAYINTIVYPFTSLPLIAYCTIPAVCLLTGKFIIPTLSNLASMLFLGLFISIIVTAVLE 807
Query: 184 YLICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDK 333
G + W ++ I +++LF K L T F +T K
Sbjct: 808 LRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAK 857
>gi|3135611|gb|AAC29067.1| (AF062485) cellulose synthase [Arabidopsis thaliana]
Length = 1081
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | | | | 1081
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 103 (36.3 bits), Expect = 0.12, P = 0.12
Identities = 38/154 (24%), Positives = 71/154 (46%), Frame = +1
Query: 4 QMGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAF--LATYGFSL 177
++ Y N +++ SLP + Y + ICLL G + P++S+ + F F +A G
Sbjct: 852 RLSYINSVVYPWTSLPLIVYCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILE 911
Query: 178 CEYLICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVVTKDVQR 357
++ G + WW ++ I +++LF + K L T F +T K D +
Sbjct: 912 MQWGKVG--IDDWWRNEQFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAAD-DGE- 967
Query: 358 EVLSKKFI*IWKLFQSCLTHI*LQLALLNLFGLLLG 465
S ++ W S L + L ++N+ G+++G
Sbjct: 968 --FSDLYLFKWT---SLLIPP-MTLLIINVIGVIVG 997
>gi|320932|pir||A44971 hypothetical protein 1 - Plasmodium brasilianum
Length = 96
Frame 2 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | | | 96
0 20 40 60 80
Plus Strand HSPs:
Score = 70 (24.6 bits), Expect = 0.72, P = 0.51
Identities = 14/41 (34%), Positives = 23/41 (56%), Frame = +2
Query: 47 CLLSVMSLFLLFAY-FVAFHCSHSFQAYGSFHL-HMHFSLH 163
C+ + F L ++ F +H HS+ +Y S+HL H + S H
Sbjct: 10 CIFIFIFTFTLISFAFHPYHSYHSYHSYHSYHLYHSYHSYH 50
>gi|2924781|gb|AAC04910.1| (AC002334) putative cellulose synthase [Arabidopsis
thaliana]
Length = 1036
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | | | 1036
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 93 (32.7 bits), Expect = 1.7, P = 0.81
Identities = 36/154 (23%), Positives = 66/154 (42%), Frame = +1
Query: 4 QMGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGF-SLC 180
++ Y N ++ S+ + Y F+ +CL G Q I L + T SL
Sbjct: 809 RVAYLNVGIYPFTSIFLVVYCFLPALCLFSG-KFIVQSLDIHFLSYLLCITVTLTLISLL 867
Query: 181 EYLICGSTANGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFIITDKVVTKDVQRE 360
E G WW ++ I T+++L + + K + + F +T K +D + +
Sbjct: 868 EVKWSGIGLEEWWRNEQFWLIGGTSAHLAAVVQGLLKVIAGIEISFTLTSKASGED-EDD 926
Query: 361 VLSKKFI*IWK-LFQSCLTHI*LQLALLNLFGLLLG 465
+ + +I W LF LT I ++NL +++G
Sbjct: 927 IFADLYIVKWTGLFIMPLTII-----IVNLVAIVIG 957
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=6.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.354 0.159 0.613
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.347 0.151 0.544
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.345 0.154 0.543
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.344 0.151 0.524
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.344 0.148 0.514
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.363 0.161 0.645
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 200 200 10. 76 3 12 22 0.094 35
31 0.10 38
+2 0 200 199 10. 76 3 12 22 0.093 35
31 0.10 38
+1 0 201 200 10. 76 3 12 22 0.094 35
31 0.10 38
-1 0 201 200 10. 76 3 12 22 0.094 35
31 0.10 38
-2 0 200 200 10. 76 3 12 22 0.094 35
31 0.10 38
-3 0 200 200 10. 76 3 12 22 0.094 35
31 0.10 38
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 8:50 PM CDT May 27, 2000
Format: BLAST
# of letters in database: 158,518,215
# of sequences in database: 505,245
# of database sequences satisfying E: 24
No. of states in DFA: 596 (59 KB)
Total size of DFA: 260 KB (320 KB)
Time to generate neighborhood: 0.03u 0.00s 0.03t Elapsed: 00:00:00
No. of threads or processors used: 4
Search cpu time: 273.95u 1.23s 275.18t Elapsed: 00:01:39
Total cpu time: 274.04u 1.26s 275.30t Elapsed: 00:01:39
Start: Wed Feb 14 17:37:38 2001 End: Wed Feb 14 17:39:17 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000