WU-BLAST 2.0 search of the National Center for Biotechnology Information's NR Protein Database.
BEAUTY post-processing provided by the Human Genome Sequencing Center, Baylor College of Medicine.
BEAUTY Reference:
Worley KC, Culpepper P, Wiese BA, Smith RF. BEAUTY-X: enhanced BLAST searches for DNA queries. Bioinformatics 1998;14(10):890-1. Abstract
Worley KC, Wiese BA, Smith RF. BEAUTY: an enhanced BLAST-based search tool that integrates multiple biological information resources into sequence similarity search results. Genome Res 1995 Sep;5(2):173-84 Abstract
RepeatMasker repeats found in sequence:No Repeats Found.Reference: Gish, Warren (1994-1997). unpublished. Gish, Warren and David J. States (1993). Identification of protein coding regions by database similarity search. Nat. Genet. 3:266-72.Notice: statistical significance is estimated under the assumption that the equivalent of one entire reading frame in the query sequence codes for protein and that significant alignments will involve only coding reading frames.
Query= B12G07.seq(1>372) (347 letters)
Translating both strands of query sequence in all 6 reading framesDatabase: nr 625,274 sequences; 197,782,623 total letters.Observed Numbers of Database Sequences Satisfying Various EXPECTation Thresholds (E parameter values) Histogram units: = 3 Sequences : less than 3 sequences EXPECTation Threshold (E parameter) | V Observed Counts--> 10000 901 151 |================================================== 6310 750 156 |==================================================== 3980 594 182 |============================================================ 2510 412 95 |=============================== 1580 317 110 |==================================== 1000 207 78 |========================== 631 129 25 |======== 398 104 22 |======= 251 82 10 |=== 158 72 4 |= 100 68 1 |: 63.1 67 2 |: 39.8 65 3 |= 25.1 62 1 |: 15.8 61 4 |= >>>>>>>>>>>>>>>>>>>>> Expect = 10.0, Observed = 57 <<<<<<<<<<<<<<<<< 10.0 57 1 |: 6.31 56 0 | 3.98 56 1 |: 2.51 55 0 | 1.58 55 1 |: 1.00 54 0 | 0.63 54 0 | 0.40 54 0 | 0.25 54 0 | 0.16 54 0 | 0.10 54 2 |: 0.063 52 0 | 0.040 52 0 | 0.025 52 0 | 0.016 52 0 | 0.010 52 0 | 0.0063 52 1 |: 0.0040 51 1 |: 0.0025 50 1 |: Smallest Sum Reading High Probability Sequences producing High-scoring Segment Pairs: Frame Score P(N) N gi|7209279|emb|CAB76966.1|(AJ250026) S-adenosylmethio... +1 427 4.2e-39 1 gi|3913420|sp|Q43820|DCAM_PEAS-ADENOSYLMETHIONINE DEC... +1 418 3.7e-38 1 gi|416883|sp|Q04694|DCAM_SOLTUS-ADENOSYLMETHIONINE DE... +1 395 1.0e-35 1 gi|3913419|sp|Q96555|DCAM_DATSTS-ADENOSYLMETHIONINE D... +1 392 2.1e-35 1 gi|3913423|sp|O04009|DCAM_TOBACS-ADENOSYLMETHIONINE D... +1 392 2.1e-35 1 gi|7436597|pir||T01934adenosylmethionine decarboxylas... +1 392 2.1e-35 1 gi|6014931|sp|O80402|DCAM_NICSYS-ADENOSYLMETHIONINE D... +1 392 2.1e-35 1 gi|1076676|pir||S52662adenosylmethionine decarboxylas... +1 390 3.5e-35 1 gi|3913416|sp|Q42679|DCAM_CATROS-ADENOSYLMETHIONINE D... +1 380 4.0e-34 1 gi|3913439|sp|Q96471|DCAM_PHANIS-ADENOSYLMETHIONINE D... +1 376 1.1e-33 1 gi|1169232|sp|P46255|DCAM_SPIOLS-ADENOSYLMETHIONINE D... +1 371 3.6e-33 1 gi|7960047|gb|AAF71199.1|AF188998_1(AF188998) S-adeno... +1 367 9.5e-33 1 gi|3913414|sp|Q39677|DCA2_DIACAS-ADENOSYLMETHIONINE D... +1 365 1.5e-32 1 gi|12620933|gb|AAG61146.1|AF334029_1(AF334029) S-aden... +1 363 2.5e-32 1 gi|11268018|pir||T51378S-adenosylmethionine decarboxy... +1 361 4.1e-32 1 gi|3913418|sp|Q96286|DCAM_ARATHS-ADENOSYLMETHIONINE D... +1 355 1.8e-31 1 gi|6957710|gb|AAF32454.1|(AC021640) S-adenosylmethion... +1 355 1.8e-31 1 gi|3913413|sp|Q39676|DCA1_DIACAS-ADENOSYLMETHIONINE D... +1 352 3.7e-31 1 gi|3913410|sp|O49972|DCA2_BRAJUS-ADENOSYLMETHIONINE D... +1 348 9.8e-31 1 gi|6014929|sp|O65354|DCAM_HELANS-ADENOSYLMETHIONINE D... +1 348 9.8e-31 1 gi|1490554|gb|AAB17665.1|(U63633) S-adenosylmethionin... +1 344 2.6e-30 1 gi|6636362|gb|AAF20160.1|AF215665_1(AF215665) S-adeno... +1 344 2.6e-30 1 gi|9279737|dbj|BAB01327.1|(AB025639) S-adenosylmethio... +1 338 1.1e-29 1 gi|3913415|sp|Q42613|DCA1_BRAJUS-ADENOSYLMETHIONINE D... +1 336 1.8e-29 1 gi|4325045|gb|AAD17232.1|(AF117660) S-adenosylmethion... +1 263 1.0e-21 1 gi|6646848|emb|CAA69074.2|(Y07766) S-adenosylmethioni... +1 258 4.9e-21 1 gi|7436593|pir||T04099adenosylmethionine decarboxylas... +1 258 4.9e-21 1 gi|10241685|emb|CAC09522.1|(AL442115) S-adenosylmethi... +1 256 5.5e-21 1 gi|6166113|sp|O24215|DCAM_ORYSAS-ADENOSYLMETHIONINE D... +1 256 8.3e-21 1 gi|6646868|emb|CAB64600.1|(AJ251899) S-adenosylmethio... +1 254 1.3e-20 1 gi|3913438|sp|Q42829|DCAM_HORCHS-ADENOSYLMETHIONINE D... +1 253 1.7e-20 1 gi|3913427|sp|O24575|DCAM_MAIZES-ADENOSYLMETHIONINE D... +1 242 3.6e-19 1 gi|2394382|gb|AAC17190.1|(AF018285) S-adenosylmethion... +1 131 9.7e-08 1 gi|1890170|emb|CAA72505.1|(Y11820) S-adenosylmethioni... +1 129 8.1e-07 1 gi|6166112|sp|P91931|DCAM_DROMES-ADENOSYLMETHIONINE D... +1 126 1.7e-06 1 gi|7297665|gb|AAF52917.1|(AE003628) SamDC gene produc... +1 126 1.7e-06 1 gi|2500049|sp|P79888|DCAM_XENLAS-ADENOSYLMETHIONINE D... +1 120 7.3e-06 1 gi|5542279|pdb|1JEN|AChain A, Human S-Adenosylmethion... +1 116 1.2e-05 1 gi|12731861ref|XP_011385.1| S-adenosylmethionine deca... +1 116 2.0e-05 1 gi|8567326ref|NP_033795.1| s-adenosylmethionine decar... +1 115 2.6e-05 1 gi|4502069ref|NP_001625.1| S-adenosylmethionine decar... +1 115 2.6e-05 1 gi|1706314|sp|P50243|DCAM_BOVINS-ADENOSYLMETHIONINE D... +1 115 2.6e-05 1 gi|8567328ref|NP_031470.2| s-adenosylmethionine decar... +1 115 2.6e-05 1 gi|5668582|gb|AAD45965.1|AF052604_1(AF052604) S-adeno... +1 115 2.6e-05 1 gi|399341|sp|P17708|DCAM_RATS-ADENOSYLMETHIONINE DECA... +1 114 3.3e-05 1 gi|118296|sp|P28918|DCAM_MESAUS-ADENOSYLMETHIONINE DE... +1 114 3.3e-05 1 gi|68179|pir||DCRTDMadenosylmethionine decarboxylase ... +1 113 4.2e-05 1 gi|1706315|sp|P50244|DCAM_TRYBBS-ADENOSYLMETHIONINE D... +1 112 6.5e-05 1 gi|6014928|sp|O02655|DCAM_CAEELS-ADENOSYLMETHIONINE D... +1 109 0.00014 1 gi|3328196|gb|AAC26796.1|(AF075243) S-adenosylmethion... +1 98 0.0022 1
Use the and icons to retrieve links to Entrez:
WARNING: Descriptions of 7 database sequences were not reported due to the limiting value of parameter V = 50. >gi|7209279|emb|CAB76966.1| (AJ250026) S-adenosylmethionine decarboxylase [Vicia faba] Length = 353 Frame 1 hits (HSPs): ________________ __________________________________________________ Database sequence: | | | | 353 0 150 300 Plus Strand HSPs: Score = 427 (150.3 bits), Expect = 4.2e-39, P = 4.2e-39 Identities = 80/106 (75%), Positives = 90/106 (84%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFY 183 DG+FGKLG+GS AYI+GG D+AQNWHVY ASA SV+ D+V TLEMCMTGLDREKA VF+ Sbjct: 137 DGFFGKLGSGSKAYIMGGSDEAQNWHVYCASADSVSPADSVYTLEMCMTGLDREKASVFF 196 Query: 184 KEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 K+Q+ AA MT NSGIRKIL +SEICDFDFEPCGYSMNS EG VS Sbjct: 197 KQQTGSAAEMTVNSGIRKILPNSEICDFDFEPCGYSMNSVEGPAVS 242 >gi|3913420|sp|Q43820|DCAM_PEA S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) (SAMDC) >gi|7436596|pir||T06515 probable adenosylmethionine decarboxylase (EC 4.1.1.50) - garden pea >gi|1421752|gb|AAB03865.1| (U60592) S-adenosylmethionine decarboxylase [Pisum sativum] Length = 353 Frame 1 hits (HSPs): ________________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 353 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL) ( 68..69 Entrez modified site: CONVERTED TO A PYRUVOYL G 69 Entrez active site: IMPORTANT FOR CATALYTIC ACT 9 Entrez active site: IMPORTANT FOR CATALYTIC ACT 12 Entrez active site: IMPORTANT FOR CATALYTIC ACT 83 PFAM SAM_decarbox: Adenosylmethionine decarbo 2..334 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 3..331 PRODOM PD192063: DCAM_PEA 333..352 __________________ Plus Strand HSPs: Score = 418 (147.1 bits), Expect = 3.7e-38, P = 3.7e-38 Identities = 79/106 (74%), Positives = 90/106 (84%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFY 183 DG+FGKLG+GS AYILGG D+AQNWH+Y AS+ SV+ +V TLEMCMTGLDREKA VF+ Sbjct: 137 DGFFGKLGSGSMAYILGGSDEAQNWHIYCASSDSVSPEGSVYTLEMCMTGLDREKASVFF 196 Query: 184 KEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 KEQ+ AA MT NSGIRKIL +SEICDFDFEPCGYSMNS EG+ VS Sbjct: 197 KEQTGSAAEMTVNSGIRKILRNSEICDFDFEPCGYSMNSVEGSAVS 242 >gi|416883|sp|Q04694|DCAM_SOLTU S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) (SAMDC) (INDUCED STOLEN TIP PROTEIN TUB13) >gi|282978|pir||S28047 TUB13 protein - potato >gi|21485|emb|CAA77742.1| (Z11680) induced stolon tip protein [Solanum tuberosum] Length = 360 Frame 1 hits (HSPs): ________________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 360 0 150 300 __________________ Annotated Domains: DOMO DM01913: S-ADENOSYLMETHIONINEDECARBOXYLA 1..342 Entrez other site: CLEAVAGE (NONHYDROLYTICAL) ( 72..73 Entrez modified site: CONVERTED TO A PYRUVOYL G 73 Entrez active site: IMPORTANT FOR CATALYTIC ACT 13 Entrez active site: IMPORTANT FOR CATALYTIC ACT 16 Entrez active site: IMPORTANT FOR CATALYTIC ACT 87 PFAM SAM_decarbox: Adenosylmethionine decarbo 6..338 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 6..335 PRODOM PD192295: DCAM_SOLTU 337..359 __________________ Plus Strand HSPs: Score = 395 (139.0 bits), Expect = 1.0e-35, P = 1.0e-35 Identities = 78/106 (73%), Positives = 82/106 (77%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFY 183 DGYFGKL AGS A I+G DK Q WHVYSASA SV D V TLEMCMTGLDREKA VFY Sbjct: 141 DGYFGKLAAGSKAVIMGSPDKTQKWHVYSASAGSVQSNDPVYTLEMCMTGLDREKASVFY 200 Query: 184 KEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 K + + AA MT SGIRKIL SEICDF+FEPCGYSMNS EGA VS Sbjct: 201 KTEESSAAHMTVRSGIRKILPKSEICDFEFEPCGYSMNSIEGAAVS 246 >gi|3913419|sp|Q96555|DCAM_DATST S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) (SAMDC) >gi|1531765|emb|CAA69076.1| (Y07768) S-adenosylmethionine decarboxylase [Datura stramonium] Length = 362 Frame 1 hits (HSPs): _______________ Annotated Domains: _______________________________________________ __________________________________________________ Database sequence: | | | | 362 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL) ( 72..73 Entrez modified site: CONVERTED TO A PYRUVOYL G 73 Entrez active site: IMPORTANT FOR CATALYTIC ACT 13 Entrez active site: IMPORTANT FOR CATALYTIC ACT 16 Entrez active site: IMPORTANT FOR CATALYTIC ACT 87 PFAM SAM_decarbox: Adenosylmethionine decarbo 6..338 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 6..335 __________________ Plus Strand HSPs: Score = 392 (138.0 bits), Expect = 2.1e-35, P = 2.1e-35 Identities = 77/106 (72%), Positives = 82/106 (77%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFY 183 DGYFGKL AGS A I+G DK Q WHVYSASA V D V TLEMCMTGLDREKA VFY Sbjct: 141 DGYFGKLAAGSKAVIMGNPDKTQKWHVYSASAGPVQSNDPVYTLEMCMTGLDREKASVFY 200 Query: 184 KEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 K + + AA MT SGIRKIL +SEICDF+FEPCGYSMNS EGA VS Sbjct: 201 KTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAAVS 246 >gi|3913423|sp|O04009|DCAM_TOBAC S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) (SAMDC) >gi|1917013|gb|AAB51301.1| (U91924) S-adenosylmethionine decarboxylase [Nicotiana tabacum] Length = 361 Frame 1 hits (HSPs): _______________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 361 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL) ( 72..73 Entrez modified site: CONVERTED TO A PYRUVOYL G 73 Entrez active site: IMPORTANT FOR CATALYTIC ACT 13 Entrez active site: IMPORTANT FOR CATALYTIC ACT 16 Entrez active site: IMPORTANT FOR CATALYTIC ACT 87 PFAM SAM_decarbox: Adenosylmethionine decarbo 6..338 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 6..335 PRODOM PD188616: DCAM(2) 337..360 __________________ Plus Strand HSPs: Score = 392 (138.0 bits), Expect = 2.1e-35, P = 2.1e-35 Identities = 76/106 (71%), Positives = 83/106 (78%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFY 183 DGYFGKL AGS A I+G DKAQ WHVYSASA + D V TLEMCMTGLDREKA VFY Sbjct: 141 DGYFGKLAAGSKAVIMGSPDKAQKWHVYSASAGPIQSNDPVYTLEMCMTGLDREKASVFY 200 Query: 184 KEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 K + + AA MT SGIRKIL +SEICDF+FEPCGYSMNS EGA +S Sbjct: 201 KTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAALS 246 >gi|7436597|pir||T01934 adenosylmethionine decarboxylase (EC 4.1.1.50) - common tobacco >gi|2687584|gb|AAB88854.1| (AF033100) S-adenosylmethionine decarboxylase [Nicotiana tabacum] Length = 361 Frame 1 hits (HSPs): _______________ __________________________________________________ Database sequence: | | | | 361 0 150 300 Plus Strand HSPs: Score = 392 (138.0 bits), Expect = 2.1e-35, P = 2.1e-35 Identities = 76/106 (71%), Positives = 83/106 (78%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFY 183 DGYFGKL AGS A I+G DKAQ WHVYSASA + D V TLEMCMTGLDREKA VFY Sbjct: 141 DGYFGKLAAGSKAVIMGSPDKAQKWHVYSASAGPIQSNDPVYTLEMCMTGLDREKASVFY 200 Query: 184 KEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 K + + AA MT SGIRKIL +SEICDF+FEPCGYSMNS EGA +S Sbjct: 201 KTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAALS 246 >gi|6014931|sp|O80402|DCAM_NICSY S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) (NSSAMDC-1) >gi|3252792|dbj|BAA29040.1| (AB015609) S-adenosylmethionine decarboxylase [Nicotiana sylvestris] Length = 361 Frame 1 hits (HSPs): _______________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 361 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL). 72..73 Entrez modified site: CONVERTED TO A PYRUVOYL G 73 Entrez active site: IMPORTANT FOR CATALYTIC ACT 13 Entrez active site: IMPORTANT FOR CATALYTIC ACT 16 Entrez active site: IMPORTANT FOR CATALYTIC ACT 87 PFAM SAM_decarbox: Adenosylmethionine decarbo 6..338 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 6..335 PRODOM PD188616: DCAM(2) 337..360 __________________ Plus Strand HSPs: Score = 392 (138.0 bits), Expect = 2.1e-35, P = 2.1e-35 Identities = 76/106 (71%), Positives = 83/106 (78%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFY 183 DGYFGKL AGS A I+G DKAQ WHVYSASA + D V TLEMCMTGLDREKA VFY Sbjct: 141 DGYFGKLAAGSKAVIMGSPDKAQKWHVYSASAGPIQSNDPVYTLEMCMTGLDREKASVFY 200 Query: 184 KEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 K + + AA MT SGIRKIL +SEICDF+FEPCGYSMNS EGA +S Sbjct: 201 KTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAALS 246 >gi|1076676|pir||S52662 adenosylmethionine decarboxylase (EC 4.1.1.50) TUB13 [similarity] - potato >gi|807094|gb|AAB32507.1| (S74514) S-adenosylmethionine decarboxylase, SAMDC {EC 4.1.1.50} [Solanum tuberosum=potatoes, cv. Desiree, Peptide, 360 aa] Length = 360 Frame 1 hits (HSPs): ________________ __________________________________________________ Database sequence: | | | | 360 0 150 300 Plus Strand HSPs: Score = 390 (137.3 bits), Expect = 3.5e-35, P = 3.5e-35 Identities = 77/106 (72%), Positives = 81/106 (76%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFY 183 DGYFGKL AGS A I+G DK Q WHVYSASA V D V TLEMCMTGLDREKA VFY Sbjct: 141 DGYFGKLAAGSKAVIMGSPDKTQKWHVYSASAGPVQSNDPVYTLEMCMTGLDREKASVFY 200 Query: 184 KEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 K + + AA MT SGIRKIL SEICDF+FEPCGYSMNS EGA VS Sbjct: 201 KTEESSAAHMTVRSGIRKILPKSEICDFEFEPCGYSMNSIEGAAVS 246 >gi|3913416|sp|Q42679|DCAM_CATRO S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) (SAMDC) >gi|2129920|pir||S68990 adenosylmethionine decarboxylase (EC 4.1.1.50) - Madagascar periwinkle >gi|758695|gb|AAC48989.1| (U12573) S-adenosyl-L-methionine decarboxylase proenzyme [Catharanthus roseus] >gi|1094441|prf||2106177A Met(S-adenosyl) decarboxylase [Catharanthus roseus] Length = 357 Frame 1 hits (HSPs): ________________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 357 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL). 70..71 Entrez modified site: CONVERTED TO A PYRUVOYL G 71 Entrez active site: IMPORTANT FOR CATALYTIC ACT 11 Entrez active site: IMPORTANT FOR CATALYTIC ACT 14 Entrez active site: IMPORTANT FOR CATALYTIC ACT 85 PFAM SAM_decarbox: Adenosylmethionine decarbo 4..336 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 4..334 PRODOM PD192119: DCAM_CATRO 336..356 __________________ Plus Strand HSPs: Score = 380 (133.8 bits), Expect = 4.0e-34, P = 4.0e-34 Identities = 72/106 (67%), Positives = 81/106 (76%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFY 183 D YFGKLG SNA+I+G D+ Q WHVYSAS S D TLEMCMTGLDREKA VFY Sbjct: 139 DNYFGKLGLESNAFIMGNPDQPQKWHVYSASVGSEQSSDPTYTLEMCMTGLDREKASVFY 198 Query: 184 KEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 K +S+ AA+MT SGIRKIL DSEICDF+F+PCGYSMNS E A +S Sbjct: 199 KSESSSAALMTTRSGIRKILPDSEICDFEFDPCGYSMNSIEEAAIS 244 >gi|3913439|sp|Q96471|DCAM_PHANI S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) (SAMDC) >gi|1498080|gb|AAC04611.1| (U64927) S-adenosylmethionine decarboxylase [Ipomoea nil] Length = 362 Frame 1 hits (HSPs): _______________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 362 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL) ( 70..71 Entrez modified site: CONVERTED TO A PYRUVOYL G 71 Entrez active site: IMPORTANT FOR CATALYTIC ACT 11 Entrez active site: IMPORTANT FOR CATALYTIC ACT 14 Entrez active site: IMPORTANT FOR CATALYTIC ACT 85 PFAM SAM_decarbox: Adenosylmethionine decarbo 4..336 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 6..331 PRODOM PD192787: DCAM_PHANI 333..361 __________________ Plus Strand HSPs: Score = 376 (132.4 bits), Expect = 1.1e-33, P = 1.1e-33 Identities = 70/106 (66%), Positives = 81/106 (76%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFY 183 DGYFGKLG GS AY++GG K Q WHVYSASA S + TLEMCMTGLD++ A VF+ Sbjct: 139 DGYFGKLGTGSKAYVMGGAGKQQQWHVYSASAESAENTFPIYTLEMCMTGLDKKSASVFF 198 Query: 184 KEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 K QS+ AA+MT SGIRKIL S+ICDFDFEPCGYSMN+ EG +S Sbjct: 199 KTQSSSAAVMTDASGIRKILPGSDICDFDFEPCGYSMNAVEGGTIS 244 >gi|1169232|sp|P46255|DCAM_SPIOL S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) (SAMDC) >gi|1076263|pir||S49222 adenosylmethionine decarboxylase (EC 4.1.1.50) - spinach >gi|547472|emb|CAA57170.1| (X81414) adenosylmethionine decarboxylase [Spinacia oleracea] Length = 363 Frame 1 hits (HSPs): ________________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 363 0 150 300 __________________ Annotated Domains: DOMO DM01913: S-ADENOSYLMETHIONINEDECARBOXYLA 1..339 Entrez other site: CLEAVAGE (NONHYDROLYTICAL) ( 68..69 Entrez modified site: CONVERTED TO A PYRUVOYL G 69 Entrez active site: IMPORTANT FOR CATALYTIC ACT 9 Entrez active site: IMPORTANT FOR CATALYTIC ACT 12 Entrez active site: IMPORTANT FOR CATALYTIC ACT 83 PFAM SAM_decarbox: Adenosylmethionine decarbo 2..335 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 3..332 PRODOM PD192788: DCAM_SPIOL 334..362 __________________ Plus Strand HSPs: Score = 371 (130.6 bits), Expect = 3.6e-33, P = 3.6e-33 Identities = 70/106 (66%), Positives = 84/106 (79%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFY 183 DGYFGKL AGS A+++G K Q WHVYSASA +++ + V TLEMCMTGL +EKA VF+ Sbjct: 137 DGYFGKLAAGSKAFVMGDPAKPQKWHVYSASAETISFEEPVYTLEMCMTGLKKEKASVFF 196 Query: 184 KEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 K QS AA+MT +SGIRKIL DS+ICDFDFEPCGYSMN+ EG +S Sbjct: 197 KSQSPNAAVMTESSGIRKILPDSKICDFDFEPCGYSMNAIEGPAIS 242 >gi|7960047|gb|AAF71199.1|AF188998_1 (AF188998) S-adenosylmethionine decarboxylase [Ipomoea batatas] Length = 362 Frame 1 hits (HSPs): _______________ __________________________________________________ Database sequence: | | | | 362 0 150 300 Plus Strand HSPs: Score = 367 (129.2 bits), Expect = 9.5e-33, P = 9.5e-33 Identities = 69/106 (65%), Positives = 79/106 (74%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFY 183 D YFGKL GS AY++GG K Q WHVYSASA S + TLEMCMTGLD++ A VF+ Sbjct: 139 DSYFGKLSTGSKAYVMGGAGKQQQWHVYSASAESAENTFPIYTLEMCMTGLDKKSASVFF 198 Query: 184 KEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 K QS+ AA+MT SGIRKIL SEICDFDFEPCGYSMN+ EG +S Sbjct: 199 KTQSSSAAVMTDASGIRKILPGSEICDFDFEPCGYSMNAVEGGAIS 244 >gi|3913414|sp|Q39677|DCA2_DIACA S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME 2 (ADOMETDC 2) (SAMDC 2) (SAMDC16) >gi|7436591|pir||T10708 adenosylmethionine decarboxylase (EC 4.1.1.50) 2 - clove pink >gi|1155242|gb|AAD09840.1| (U38527) S-adenosylmethionine decarboxylase 2 [Dianthus caryophyllus] Length = 377 Frame 1 hits (HSPs): ______________ Annotated Domains: ________________________________________________ __________________________________________________ Database sequence: | | | | 377 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL) ( 83..84 Entrez modified site: CONVERTED TO A PYRUVOYL G 84 Entrez active site: IMPORTANT FOR CATALYTIC ACT 24 Entrez active site: IMPORTANT FOR CATALYTIC ACT 27 Entrez active site: IMPORTANT FOR CATALYTIC ACT 98 PFAM SAM_decarbox: Adenosylmethionine decarbo 17..350 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 18..347 PRODOM PD044438: DCA2_DIACA 349..376 __________________ Plus Strand HSPs: Score = 365 (128.5 bits), Expect = 1.5e-32, P = 1.5e-32 Identities = 72/106 (67%), Positives = 81/106 (76%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFY 183 D YF KLGAGS A ++G K Q WHVYSA+A + D V TLEMCMTGLD+EKA VF+ Sbjct: 152 DNYFAKLGAGSKAIVMGSPGKPQKWHVYSATAET-NYDDPVYTLEMCMTGLDKEKASVFF 210 Query: 184 KEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 K QSA AA+MT +SGIRKIL DS ICDFDFEPCGYSMN+ EG VS Sbjct: 211 KSQSASAAVMTESSGIRKILPDSVICDFDFEPCGYSMNAIEGPAVS 256 >gi|12620933|gb|AAG61146.1|AF334029_1 (AF334029) S-adenosyl-methionine decarboxylase [Daucus carota] Length = 361 Frame 1 hits (HSPs): _______________ __________________________________________________ Database sequence: | | | | 361 0 150 300 Plus Strand HSPs: Score = 363 (127.8 bits), Expect = 2.5e-32, P = 2.5e-32 Identities = 67/106 (63%), Positives = 79/106 (74%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFY 183 D YFGKLG+GS AYI+GG DK Q WHVYSA A S D V T+EMCMT L+R+KA VFY Sbjct: 139 DNYFGKLGSGSKAYIMGGSDKQQKWHVYSACAASTRTLDPVYTMEMCMTSLNRDKASVFY 198 Query: 184 KEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 K S+ A +T NSG+R IL +S ICDF+F+PCGYSMN+ EG VS Sbjct: 199 KTNSSSATSVTDNSGLRDILPNSRICDFEFDPCGYSMNAVEGPAVS 244 >gi|11268018|pir||T51378 S-adenosylmethionine decarboxylase (adoMetDC2) - Arabidopsis thaliana >gi|6624621|emb|CAB63805.1| (AJ251915) S-adenosylmethionine decarboxylase [Arabidopsis thaliana] >gi|6682287|emb|CAB64672.1| (AJ252212) S-adenosylmethionine decarboxylase [Arabidopsis thaliana] >gi|9755641|emb|CAC01794.1| (AL391145) S-adenosylmethionine decarboxylase (adoMetDC2) [Arabidopsis thaliana] Length = 362 Frame 1 hits (HSPs): ________________ __________________________________________________ Database sequence: | | | | 362 0 150 300 Plus Strand HSPs: Score = 361 (127.1 bits), Expect = 4.1e-32, P = 4.1e-32 Identities = 66/106 (62%), Positives = 81/106 (76%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFY 183 DG+F KLG S AY++G D+ + WHVYSAS+ + +NV TLEMCMTGLD++KA VFY Sbjct: 137 DGHFAKLGLSSVAYLMGNDDETKKWHVYSASSANSNNKNNVYTLEMCMTGLDKDKASVFY 196 Query: 184 KEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 K +S+ A MT NSGIRKIL S+ICDF+FEPCGYSMNS EG +S Sbjct: 197 KNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSIEGDAIS 242 >gi|3913418|sp|Q96286|DCAM_ARATH S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) (SAMDC) >gi|1531763|emb|CAA69073.1| (Y07765) S-adenosylmethionine decarboxylase [Arabidopsis thaliana] Length = 366 Frame 1 hits (HSPs): ________________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 366 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL) ( 68..69 Entrez modified site: CONVERTED TO A PYRUVOYL G 69 Entrez active site: IMPORTANT FOR CATALYTIC ACT 9 Entrez active site: IMPORTANT FOR CATALYTIC ACT 12 Entrez active site: IMPORTANT FOR CATALYTIC ACT 83 PFAM SAM_decarbox: Adenosylmethionine decarbo 2..336 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 4..333 PRODOM PD187628: DCA1(1) DCA2(1) DCAM(1) 335..365 __________________ Plus Strand HSPs: Score = 355 (125.0 bits), Expect = 1.8e-31, P = 1.8e-31 Identities = 67/107 (62%), Positives = 81/107 (75%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDN-VXTLEMCMTGLDREKAQVF 180 DG+F +LG S AY++G D+ + WHVY+ASA + C+N V TLEMCMTGLDREKA VF Sbjct: 137 DGHFTQLGLNSVAYLMGNDDETKKWHVYAASAQDSSNCNNNVYTLEMCMTGLDREKAAVF 196 Query: 181 YKEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 YK+++ MT NSGIRKIL SEICDF+FEPCGYSMNS EG +S Sbjct: 197 YKDEADKTGSMTDNSGIRKILPKSEICDFEFEPCGYSMNSIEGDAIS 243 >gi|6957710|gb|AAF32454.1| (AC021640) S-adenosylmethionine decarboxylase [Arabidopsis thaliana] Length = 366 Frame 1 hits (HSPs): ________________ __________________________________________________ Database sequence: | | | | 366 0 150 300 Plus Strand HSPs: Score = 355 (125.0 bits), Expect = 1.8e-31, P = 1.8e-31 Identities = 67/107 (62%), Positives = 81/107 (75%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDN-VXTLEMCMTGLDREKAQVF 180 DG+F +LG S AY++G D+ + WHVY+ASA + C+N V TLEMCMTGLDREKA VF Sbjct: 137 DGHFTQLGLNSVAYLMGNDDETKKWHVYAASAQDSSNCNNNVYTLEMCMTGLDREKAAVF 196 Query: 181 YKEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 YK+++ MT NSGIRKIL SEICDF+FEPCGYSMNS EG +S Sbjct: 197 YKDEADKTGSMTDNSGIRKILPKSEICDFEFEPCGYSMNSIEGDAIS 243 >gi|3913413|sp|Q39676|DCA1_DIACA S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME 1 (ADOMETDC 1) (SAMDC 1) (SAMDC9) >gi|7436590|pir||T10707 adenosylmethionine decarboxylase (EC 4.1.1.50) 1 - clove pink >gi|1155240|gb|AAD09839.1| (U38526) S-adenosylmethionine decarboxylase 1 [Dianthus caryophyllus] >gi|2406585|gb|AAB70461.1| (U94786) S-adenosylmethionine decarboxylase [Dianthus caryophyllus] Length = 381 Frame 1 hits (HSPs): _______________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 381 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL) ( 92..93 Entrez modified site: CONVERTED TO A PYRUVOYL G 93 Entrez active site: IMPORTANT FOR CATALYTIC ACT 33 Entrez active site: IMPORTANT FOR CATALYTIC ACT 36 Entrez active site: IMPORTANT FOR CATALYTIC ACT 107 PFAM SAM_decarbox: Adenosylmethionine decarbo 26..357 PRODOM PD131705: DCA1_DIACA 1..26 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 28..354 PRODOM PD131707: DCA1_DIACA 356..380 __________________ Plus Strand HSPs: Score = 352 (123.9 bits), Expect = 3.7e-31, P = 3.7e-31 Identities = 69/106 (65%), Positives = 79/106 (74%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFY 183 D YFG LG GS A+++G K Q WHVYSA+A + D V TLEMCMTGLD+ KA VF+ Sbjct: 161 DKYFGNLGTGSKAFVMGSPAKPQKWHVYSATAEP-SYDDPVYTLEMCMTGLDKGKASVFF 219 Query: 184 KEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 K +SA AA+MT SGIRKIL DS ICDFDFEPCGYSMN+ EG VS Sbjct: 220 KSESASAAVMTETSGIRKILPDSAICDFDFEPCGYSMNAIEGPAVS 265 >gi|3913410|sp|O49972|DCA2_BRAJU S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME 2 (ADOMETDC 2) (SAMDC 2) >gi|7436592|pir||T10750 probable adenosylmethionine decarboxylase (EC 4.1.1.50) - leaf mustard >gi|2662406|gb|AAB88273.1| (U80916) S-adenosyl-L-methionine decarboxylase [Brassica juncea] Length = 369 Frame 1 hits (HSPs): ________________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 369 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL) ( 68..69 Entrez modified site: CONVERTED TO A PYRUVOYL G 69 Entrez active site: IMPORTANT FOR CATALYTIC ACT 9 Entrez active site: IMPORTANT FOR CATALYTIC ACT 12 Entrez active site: IMPORTANT FOR CATALYTIC ACT 83 PFAM SAM_decarbox: Adenosylmethionine decarbo 2..339 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 3..336 PRODOM PD187628: DCA1(1) DCA2(1) DCAM(1) 338..368 __________________ Plus Strand HSPs: Score = 348 (122.5 bits), Expect = 9.8e-31, P = 9.8e-31 Identities = 67/110 (60%), Positives = 81/110 (73%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASA----XSVTQCDNVXTLEMCMTGLDREKA 171 DG+F K+G S AY++G D+ + WHVYSASA + +NV TLEMCMTGLD+EKA Sbjct: 137 DGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPARNGNGNNNNNVYTLEMCMTGLDKEKA 196 Query: 172 QVFYKEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 VFYK +S+ A MT NSGIRKIL S+ICDF+FEPCGYSMNS EG +S Sbjct: 197 SVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGDAIS 246 >gi|6014929|sp|O65354|DCAM_HELAN S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) >gi|7436595|pir||T12613 adenosylmethionine decarboxylase (EC 4.1.1.50) - common sunflower >gi|3153906|gb|AAC17449.1| (AF066078) S-adenosylmethionine decarboxylase [Helianthus annuus] Length = 361 Frame 1 hits (HSPs): ________________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 361 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL). 67..68 Entrez modified site: CONVERTED TO A PYRUVOYL G 68 Entrez active site: IMPORTANT FOR CATALYTIC ACT 8 Entrez active site: IMPORTANT FOR CATALYTIC ACT 11 Entrez active site: IMPORTANT FOR CATALYTIC ACT 82 PFAM SAM_decarbox: Adenosylmethionine decarbo 1..339 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 3..336 PRODOM PD192294: DCAM_HELAN 338..360 __________________ Plus Strand HSPs: Score = 348 (122.5 bits), Expect = 9.8e-31, P = 9.8e-31 Identities = 68/109 (62%), Positives = 83/109 (76%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXS---VTQCDNVXTLEMCMTGLDREKAQ 174 D +FGKLG SNAY++GG +K Q WHVYSASA S VTQ V TLEM MTGL + A Sbjct: 136 DSHFGKLGMCSNAYVMGGAEKDQKWHVYSASAESANLVTQTAPVYTLEMSMTGLSKRNAS 195 Query: 175 VFYKEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 VF+K +S+ AA+MT +SGIRKIL +S+ICDFDF+PCGYSMN+ EG +S Sbjct: 196 VFFKSESSSAAVMTEDSGIRKILPESQICDFDFDPCGYSMNAIEGDAIS 244 >gi|1490554|gb|AAB17665.1| (U63633) S-adenosylmethionine decarboxylase [Arabidopsis thaliana] Length = 366 Frame 1 hits (HSPs): ________________ __________________________________________________ Database sequence: | | | | 366 0 150 300 Plus Strand HSPs: Score = 344 (121.1 bits), Expect = 2.6e-30, P = 2.6e-30 Identities = 66/109 (60%), Positives = 80/109 (73%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDN-VXTLEMCMTGLDREKAQVF 180 DG+F +LG S A ++G D+ + WHVY+ASA + C+N V TLEMCMTGLDREKA VF Sbjct: 137 DGHFTQLGLNSVATLMGNDDETKKWHVYAASAQDSSNCNNNVYTLEMCMTGLDREKAAVF 196 Query: 181 YKEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVSMN 327 YK+++ MT NSGIRK L SEICDF+FEPCGYSMNS EG +S N Sbjct: 197 YKDEADKTGSMTDNSGIRKNLPKSEICDFEFEPCGYSMNSIEGDAISTN 245 >gi|6636362|gb|AAF20160.1|AF215665_1 (AF215665) S-adenosyl-L-methionine decarboxylase [Brassica juncea] Length = 367 Frame 1 hits (HSPs): ________________ __________________________________________________ Database sequence: | | | | 367 0 150 300 Plus Strand HSPs: Score = 344 (121.1 bits), Expect = 2.6e-30, P = 2.6e-30 Identities = 66/108 (61%), Positives = 81/108 (75%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDN-VXTLEMCMTGLDREKAQVF 180 DG+F KLG S AY++G D+ + WHVY+ASA + + C+N V TLEMCMTGLD+EKA VF Sbjct: 137 DGHFTKLGLNSVAYLMGNDDENKKWHVYAASAQTSSDCNNNVYTLEMCMTGLDKEKASVF 196 Query: 181 YKEQSAXA-AMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 YK ++ MT NSGIRKIL S+ICDF+FEPCGYSMNS EG +S Sbjct: 197 YKNETGGENGSMTDNSGIRKILPKSQICDFEFEPCGYSMNSVEGDAIS 244 >gi|9279737|dbj|BAB01327.1| (AB025639) S-adenosylmethionine decarboxylase [Arabidopsis thaliana] Length = 349 Frame 1 hits (HSPs): ________________ __________________________________________________ Database sequence: | | | | 349 0 150 300 Plus Strand HSPs: Score = 338 (119.0 bits), Expect = 1.1e-29, P = 1.1e-29 Identities = 69/109 (63%), Positives = 78/109 (71%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDK-AQNWHVYSASAXSVTQ-CDN-VXTLEMCMTGLDREKAQ 174 D YFGKL AGS A+++GG D Q WHVYSAS+ + CD V TLEMCMTGLD KA Sbjct: 137 DDYFGKLNAGSKAFVMGGSDNNPQRWHVYSASSTEESAVCDKPVYTLEMCMTGLDNIKAS 196 Query: 175 VFYKEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 VF+K S A+ MT +SGIR IL SEICDF+FEPCGYSMNS EG VS Sbjct: 197 VFFKTNSVSASEMTISSGIRNILPGSEICDFNFEPCGYSMNSIEGDAVS 245 >gi|3913415|sp|Q42613|DCA1_BRAJU S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME 1 (ADOMETDC 1) (SAMDC 1) >gi|1204054|emb|CAA65044.1| (X95729) S-adenosylmethionine decarboxylase [Brassica juncea] Length = 368 Frame 1 hits (HSPs): _______________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 368 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL) ( 68..69 Entrez modified site: CONVERTED TO A PYRUVOYL G 69 Entrez active site: IMPORTANT FOR CATALYTIC ACT 9 Entrez active site: IMPORTANT FOR CATALYTIC ACT 12 Entrez active site: IMPORTANT FOR CATALYTIC ACT 83 PFAM SAM_decarbox: Adenosylmethionine decarbo 2..338 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 4..316 PRODOM PD131708: DCA1_BRAJU 318..346 PRODOM PD187628: DCA1(1) DCA2(1) DCAM(1) 348..367 PROSITE GLYCOSYL_HYDROL_F10: Glycosyl hydrolases 338..348 __________________ Plus Strand HSPs: Score = 336 (118.3 bits), Expect = 1.8e-29, P = 1.8e-29 Identities = 63/104 (60%), Positives = 79/104 (75%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQC--DNVXTLEMCMTGLDREKAQV 177 DG+F K+G S AY++G D+ + WHVYSASA + +NV TLEMCM+GLD++KA V Sbjct: 137 DGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNSNGDNNVYTLEMCMSGLDKDKASV 196 Query: 178 FYKEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEG 309 F+K +S+ A MT NSGIRKIL S+ICDF+FEPCGYSMNS EG Sbjct: 197 FFKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEG 240 >gi|4325045|gb|AAD17232.1| (AF117660) S-adenosylmethionine decarboxylase precursor [Triticum aestivum] Length = 392 Frame 1 hits (HSPs): _______________ __________________________________________________ Database sequence: | | | | 392 0 150 300 Plus Strand HSPs: Score = 263 (92.6 bits), Expect = 1.0e-21, P = 1.0e-21 Identities = 55/106 (51%), Positives = 71/106 (66%), Frame = +1 Query: 10 YFGKLGAGSNAYILGGQDK-AQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFYK 186 YFG L +G NAY++G K Q WH+Y A+ + TLEMCMTGLD++KA VF+K Sbjct: 141 YFGHLKSGGNAYVIGDPAKPGQKWHIYYATEQPEQP---MVTLEMCMTGLDKKKASVFFK 197 Query: 187 EQS----AXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 Q+ + A MT SGI I+ + E+CDFDFEPCGYSMN+ G+ VS Sbjct: 198 TQADSHVSCAKEMTKLSGISDIIPEMEVCDFDFEPCGYSMNAINGSAVS 246 >gi|6646848|emb|CAA69074.2| (Y07766) S-adenosylmethionine decarboxylase [Oryza sativa] Length = 398 Frame 1 hits (HSPs): ______________ __________________________________________________ Database sequence: | | | | 398 0 150 300 Plus Strand HSPs: Score = 258 (90.8 bits), Expect = 4.9e-21, P = 4.9e-21 Identities = 55/106 (51%), Positives = 69/106 (65%), Frame = +1 Query: 10 YFGKLGAGSNAYILGGQDK-AQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFYK 186 YFG L +G NAY++G K Q WH+Y A+ + TLEMCMTGLD+EKA VF+K Sbjct: 148 YFGHLKSGGNAYVIGDPAKPGQKWHIYYATQHPEQP---MVTLEMCMTGLDKEKASVFFK 204 Query: 187 EQS----AXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 + + A MT SGI I+ + EICDFDFEPCGYSMN+ G+ S Sbjct: 205 TSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSAFS 253 >gi|7436593|pir||T04099 adenosylmethionine decarboxylase homolog [similarity] - rice Length = 398 Frame 1 hits (HSPs): ______________ __________________________________________________ Database sequence: | | | | 398 0 150 300 Plus Strand HSPs: Score = 258 (90.8 bits), Expect = 4.9e-21, P = 4.9e-21 Identities = 55/106 (51%), Positives = 69/106 (65%), Frame = +1 Query: 10 YFGKLGAGSNAYILGGQDK-AQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFYK 186 YFG L +G NAY++G K Q WH+Y A+ + TLEMCMTGLD+EKA VF+K Sbjct: 148 YFGHLKSGGNAYVIGDPAKPGQKWHIYYATQHPEQP---MVTLEMCMTGLDKEKASVFFK 204 Query: 187 EQS----AXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 + + A MT SGI I+ + EICDFDFEPCGYSMN+ G+ S Sbjct: 205 TSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSAFS 253 >gi|10241685|emb|CAC09522.1| (AL442115) S-adenosylmethionine decarboxylase [Oryza sativa] Length = 319 Frame 1 hits (HSPs): __________________ __________________________________________________ Database sequence: | | | | | | | | 319 0 50 100 150 200 250 300 Plus Strand HSPs: Score = 256 (90.1 bits), Expect = 5.5e-21, P = 5.5e-21 Identities = 55/106 (51%), Positives = 68/106 (64%), Frame = +1 Query: 10 YFGKLGAGSNAYILGGQDK-AQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFYK 186 YFG L +G NAY++G K Q WH+Y A+ + TLEMCMTGLD+EKA VF+K Sbjct: 184 YFGHLKSGGNAYVIGDPAKPGQKWHIYYATQHPEQP---MVTLEMCMTGLDKEKASVFFK 240 Query: 187 EQS----AXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 + + A MT SGI I+ + EICDFDFEPCGYSMN+ G S Sbjct: 241 TSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGLAFS 289 >gi|6166113|sp|O24215|DCAM_ORYSA S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) (SAMDC) >gi|3929545|gb|AAC79990.1| (AF067194) S-adenosylmethionine decarboxylase [Oryza sativa] Length = 398 Frame 1 hits (HSPs): ______________ Annotated Domains: _________________________________________________ __________________________________________________ Database sequence: | | | | 398 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL) ( 77..78 Entrez modified site: CONVERTED TO A PYRUVOYL G 78 Entrez active site: IMPORTANT FOR CATALYTIC ACT 18 Entrez active site: IMPORTANT FOR CATALYTIC ACT 21 Entrez active site: IMPORTANT FOR CATALYTIC ACT 92 PFAM SAM_decarbox: Adenosylmethionine decarbo 11..346 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 11..341 PRODOM PD024549: DCAM(3) Q9ZPJ1(1) 345..392 __________________ Plus Strand HSPs: Score = 256 (90.1 bits), Expect = 8.3e-21, P = 8.3e-21 Identities = 55/106 (51%), Positives = 68/106 (64%), Frame = +1 Query: 10 YFGKLGAGSNAYILGGQDK-AQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFYK 186 YFG L +G NAY++G K Q WH+Y A+ + TLEMCMTGLD+EKA VF+K Sbjct: 148 YFGHLKSGGNAYVIGDPAKPGQKWHIYYATQHPEQP---MVTLEMCMTGLDKEKASVFFK 204 Query: 187 EQS----AXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 + + A MT SGI I+ + EICDFDFEPCGYSMN+ G S Sbjct: 205 TSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGLAFS 253 >gi|6646868|emb|CAB64600.1| (AJ251899) S-adenosylmethionine decarboxylase 2 [Oryza sativa] Length = 395 Frame 1 hits (HSPs): ______________ __________________________________________________ Database sequence: | | | | 395 0 150 300 Plus Strand HSPs: Score = 254 (89.4 bits), Expect = 1.3e-20, P = 1.3e-20 Identities = 55/106 (51%), Positives = 67/106 (63%), Frame = +1 Query: 10 YFGKLGAGSNAYILGGQDK-AQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFYK 186 YFG L +G NAY++G K Q WHVY A+ V TLEMCMTGLD++KA VF+K Sbjct: 148 YFGGLKSGGNAYVIGDPAKPGQKWHVYYATQHPEQP---VVTLEMCMTGLDKKKASVFFK 204 Query: 187 EQS----AXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 + A MT SGI I+ + E+CDFDFEPCGYSMN+ G S Sbjct: 205 TSADGHTTYAKEMTKLSGISDIIPEMEVCDFDFEPCGYSMNAIHGPAFS 253 >gi|3913438|sp|Q42829|DCAM_HORCH S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) (SAMDC) >gi|2147082|pir||S69191 adenosylmethionine decarboxylase (EC 4.1.1.50) precursor - wild barley >gi|1403044|emb|CAA58762.1| (X83881) S-adenosylmethionine decarboxylase [Hordeum chilense x Triticum durum] Length = 393 Frame 1 hits (HSPs): _______________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 393 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL) ( 70..71 Entrez modified site: CONVERTED TO A PYRUVOYL G 71 Entrez active site: IMPORTANT FOR CATALYTIC ACT 11 Entrez active site: IMPORTANT FOR CATALYTIC ACT 14 Entrez active site: IMPORTANT FOR CATALYTIC ACT 85 PFAM SAM_decarbox: Adenosylmethionine decarbo 4..339 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 4..335 PRODOM PD024549: DCAM(3) Q9ZPJ1(1) 337..389 __________________ Plus Strand HSPs: Score = 253 (89.1 bits), Expect = 1.7e-20, P = 1.7e-20 Identities = 53/106 (50%), Positives = 68/106 (64%), Frame = +1 Query: 10 YFGKLGAGSNAYILGGQDK-AQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFYK 186 YFG L +G NAY++G K Q WH+Y A+ + TLEMCMTGLD+ KA VF+K Sbjct: 141 YFGHLNSGGNAYVIGDPAKPGQKWHIYYATEQPEQP---MVTLEMCMTGLDKTKASVFFK 197 Query: 187 EQS----AXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 + + A MT SGI I+ + E+CDFDFEPCGYSMN+ G+ S Sbjct: 198 THADGHVSCAKEMTKLSGISDIIPEMEVCDFDFEPCGYSMNAINGSAFS 246 >gi|3913427|sp|O24575|DCAM_MAIZE S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) (SAMDC) >gi|7436594|pir||T03947 adenosylmethionine decarboxylase (EC 4.1.1.50) - maize >gi|1532073|emb|CAA69075.1| (Y07767) S-adenosylmethionine decarboxylase [Zea mays] Length = 400 Frame 1 hits (HSPs): ______________ Annotated Domains: _________________________________________________ __________________________________________________ Database sequence: | | | | 400 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL) ( 77..78 Entrez modified site: CONVERTED TO A PYRUVOYL G 78 Entrez active site: IMPORTANT FOR CATALYTIC ACT 18 Entrez active site: IMPORTANT FOR CATALYTIC ACT 21 Entrez active site: IMPORTANT FOR CATALYTIC ACT 92 PFAM SAM_decarbox: Adenosylmethionine decarbo 11..346 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 11..342 PRODOM PD024549: DCAM(3) Q9ZPJ1(1) 344..399 __________________ Plus Strand HSPs: Score = 242 (85.2 bits), Expect = 3.6e-19, P = 3.6e-19 Identities = 53/106 (50%), Positives = 68/106 (64%), Frame = +1 Query: 10 YFGKLGAGSNAYILGGQDK-AQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFYK 186 YFG L +G NAY++G + Q WHV+ A+ N LEMCMTGLD++KA VF+K Sbjct: 148 YFGGLKSGGNAYVIGDPARPGQKWHVFYATEYPEQPMVN---LEMCMTGLDKKKACVFFK 204 Query: 187 EQS----AXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMNSGEGAXVS 321 + A MT SGI +I+ + EICDFDFEPCGYSMN+ G+ S Sbjct: 205 TNADGNTTCAKEMTKLSGISEIIPEMEICDFDFEPCGYSMNAIHGSAFS 253 >gi|2394382|gb|AAC17190.1| (AF018285) S-adenosylmethionine decarboxylase [Ipomoea nil] Length = 108 Frame 1 hits (HSPs): _____________________ __________________________________________________ Database sequence: | | | | | | | 108 0 20 40 60 80 100 Plus Strand HSPs: Score = 131 (46.1 bits), Expect = 9.7e-08, P = 9.7e-08 Identities = 25/44 (56%), Positives = 28/44 (63%), Frame = +1 Query: 4 DGYFGKLGAGSNAYILGGQDKAQNWHVYSASAXSVTQCDNVXTL 135 DGYFGKLG GS AY++ K Q WHVYSASA S + TL Sbjct: 65 DGYFGKLGTGSKAYVMSDAGKQQQWHVYSASAESAENTFPIYTL 108 >gi|1890170|emb|CAA72505.1| (Y11820) S-adenosylmethionine decarboxylase [Drosophila melanogaster] Length = 347 Frame 1 hits (HSPs): ________________ __________________________________________________ Database sequence: | | | | 347 0 150 300 Plus Strand HSPs: Score = 129 (45.4 bits), Expect = 8.1e-07, P = 8.1e-07 Identities = 37/107 (34%), Positives = 50/107 (46%), Frame = +1 Query: 10 YFGKLGAGSNAYILGGQDKAQNWHVYSASAXSV-------TQCDNVX-----TLEMCMTG 153 Y + +Y LG + + W++Y+ S + T NV T+E+ M Sbjct: 133 YLDSIFPNGRSYCLGSMN-LECWYLYTFSRSDIKISPQLITDEKNVDSDPDQTIEILMQD 191 Query: 154 LDREKAQVFYKEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMN 297 LD E +FYK + A T SGI IL I DF F+PCGYSMN Sbjct: 192 LDPETMSIFYKNKFNDANGATVKSGIDTILPTMHIDDFLFDPCGYSMN 239 >gi|6166112|sp|P91931|DCAM_DROME S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) >gi|1890171|emb|CAA72102.1| (Y11216) S-adenosylmethionine decarboxylase [Drosophila melanogaster] Length = 347 Frame 1 hits (HSPs): ________________ Annotated Domains: _________________________________________________ __________________________________________________ Database sequence: | | | | 347 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL). 65..66 Entrez modified site: CONVERTED TO A PYRUVOYL G 66 Entrez active site: IMPORTANT FOR CATALYTIC ACT 10 Entrez active site: IMPORTANT FOR CATALYTIC ACT 13 Entrez active site: IMPORTANT FOR CATALYTIC ACT 80 PFAM SAM_decarbox: Adenosylmethionine decarbo 3..341 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 7..337 __________________ Plus Strand HSPs: Score = 126 (44.4 bits), Expect = 1.7e-06, P = 1.7e-06 Identities = 35/107 (32%), Positives = 48/107 (44%), Frame = +1 Query: 10 YFGKLGAGSNAYILGGQDKAQNWHVYSASAXSV------------TQCDNVXTLEMCMTG 153 Y + +Y LG + + W++Y+ S + D T+E+ M Sbjct: 133 YLDSIFPNGRSYCLGSMN-LECWYLYTFSRSDIKITPQLISDEKNVDSDPDQTIEILMQD 191 Query: 154 LDREKAQVFYKEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMN 297 LD E +FYK + A T SGI IL I DF F+PCGYSMN Sbjct: 192 LDPETMSIFYKNKFNDANGATVKSGIDTILPTMHIDDFLFDPCGYSMN 239 >gi|7297665|gb|AAF52917.1| (AE003628) SamDC gene product [Drosophila melanogaster] Length = 347 Frame 1 hits (HSPs): ________________ __________________________________________________ Database sequence: | | | | 347 0 150 300 Plus Strand HSPs: Score = 126 (44.4 bits), Expect = 1.7e-06, P = 1.7e-06 Identities = 35/107 (32%), Positives = 48/107 (44%), Frame = +1 Query: 10 YFGKLGAGSNAYILGGQDKAQNWHVYSASAXSV------------TQCDNVXTLEMCMTG 153 Y + +Y LG + + W++Y+ S + D T+E+ M Sbjct: 133 YLDSIFPNGRSYCLGSMN-LECWYLYTFSRSDIKITPQLISDEKNVDSDPDQTIEILMQD 191 Query: 154 LDREKAQVFYKEQSAXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMN 297 LD E +FYK + A T SGI IL I DF F+PCGYSMN Sbjct: 192 LDPETMSIFYKNKFNDANGATVKSGIDTILPTMHIDDFLFDPCGYSMN 239 >gi|2500049|sp|P79888|DCAM_XENLA S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) (SAMDC) >gi|7436589|pir||S72197 adenosylmethionine decarboxylase (EC 4.1.1.50) precursor - African clawed frog >gi|1683643|gb|AAB36519.1| (S82621) S-adenosylmethionine decarboxylase, SAMDC [Xenopus laevis=African clawed frogs, Peptide, 335 aa] Length = 335 Frame 1 hits (HSPs): ______________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 335 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL) ( 69..70 Entrez modified site: CONVERTED TO A PYRUVOYL G 70 Entrez active site: IMPORTANT FOR CATALYTIC ACT 12 Entrez active site: IMPORTANT FOR CATALYTIC ACT 15 Entrez active site: IMPORTANT FOR CATALYTIC ACT 84 PFAM SAM_decarbox: Adenosylmethionine decarbo 5..331 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 7..330 __________________ Plus Strand HSPs: Score = 120 (42.2 bits), Expect = 7.3e-06, P = 7.3e-06 Identities = 32/86 (37%), Positives = 47/86 (54%), Frame = +1 Query: 40 AYILGGQDKAQNWHVYSASAXS---VTQCDNVXTLEMCMTGLDREKAQVFYKEQSAXAAM 210 AY +G + + W++Y+ ++Q D TLE+ M+ LD E FY ++ A Sbjct: 148 AYCMG-RINSDCWYLYTLDIPDEYVISQPDQ--TLEILMSELDPEVMDQFYMKEGVTAND 204 Query: 211 MTXNSGIRKILXDSEICDFDFEPCGYSMN 297 +T SGIR ++ S I F PCGYSMN Sbjct: 205 VTRVSGIRDLITGSVIDATMFSPCGYSMN 233 >gi|5542279|pdb|1JEN|A Chain A, Human S-Adenosylmethionine Decarboxylase >gi|5542281|pdb|1JEN|C Chain C, Human S-Adenosylmethionine Decarboxylase Length = 267 Frame 1 hits (HSPs): _________________ __________________________________________________ Database sequence: | | | | | | | 267 0 50 100 150 200 250 Plus Strand HSPs: Score = 116 (40.8 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 31/86 (36%), Positives = 46/86 (53%), Frame = +1 Query: 40 AYILGGQDKAQNWHVYSAS---AXSVTQCDNVXTLEMCMTGLDREKAQVFYKEQSAXAAM 210 AY +G + + W++Y+ + ++Q D TLE+ M+ LD FY + A Sbjct: 79 AYCMGRMN-SDCWYLYTLDFPESRVISQPDQ--TLEILMSELDPAVMDQFYMKDGVTAKD 135 Query: 211 MTXNSGIRKILXDSEICDFDFEPCGYSMN 297 +T SGIR ++ S I F PCGYSMN Sbjct: 136 VTRESGIRDLIPGSVIDATMFNPCGYSMN 164 >gi|12731861 ref|XP_011385.1| S-adenosylmethionine decarboxylase 1 precursor [Homo sapiens] >gi|12652837|gb|AAH00171.1|AAH00171 (BC000171) S-adenosylmethionine decarboxylase 1 [Homo sapiens] Length = 334 Frame 1 hits (HSPs): ______________ __________________________________________________ Database sequence: | | | | 334 0 150 300 Plus Strand HSPs: Score = 116 (40.8 bits), Expect = 2.0e-05, P = 2.0e-05 Identities = 31/86 (36%), Positives = 46/86 (53%), Frame = +1 Query: 40 AYILGGQDKAQNWHVYSAS---AXSVTQCDNVXTLEMCMTGLDREKAQVFYKEQSAXAAM 210 AY +G + + W++Y+ + ++Q D TLE+ M+ LD FY + A Sbjct: 146 AYCMGRMN-SDCWYLYTLDFPESRVISQPDQ--TLEILMSELDPAVMDQFYMKDGVTAKD 202 Query: 211 MTXNSGIRKILXDSEICDFDFEPCGYSMN 297 +T SGIR ++ S I F PCGYSMN Sbjct: 203 VTRESGIRDLIPGSVIDATMFNPCGYSMN 231 >gi|8567326 ref|NP_033795.1| s-adenosylmethionine decarboxylase 1 [Mus musculus] >gi|399340|sp|P31154|DCAM_MOUSE S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) >gi|49896|emb|CAA78710.1| (Z14986) S-adenosylmethionine decarboxylase [Mus musculus] >gi|220331|dbj|BAA02243.1| (D12780) S-adenosylmethionine decarboxylase [Mus musculus] >gi|5821358|dbj|BAA83784.1| (AB025024) S-adenosylmethionine decarboxylase [Mus musculus] Length = 334 Frame 1 hits (HSPs): ______________ __________________________________________________ Database sequence: | | | | 334 0 150 300 Plus Strand HSPs: Score = 115 (40.5 bits), Expect = 2.6e-05, P = 2.6e-05 Identities = 31/86 (36%), Positives = 46/86 (53%), Frame = +1 Query: 40 AYILGGQDKAQNWHVYSAS---AXSVTQCDNVXTLEMCMTGLDREKAQVFYKEQSAXAAM 210 AY +G + + W++Y+ + ++Q D TLE+ M+ LD FY + A Sbjct: 146 AYCMGRMN-SDCWYLYTLDFPESRVISQPDQ--TLEILMSELDPAVMDQFYMKDGVTAKD 202 Query: 211 MTXNSGIRKILXDSEICDFDFEPCGYSMN 297 +T SGIR ++ S I F PCGYSMN Sbjct: 203 VTRESGIRDLIPGSVIDATLFNPCGYSMN 231 >gi|4502069 ref|NP_001625.1| S-adenosylmethionine decarboxylase 1 precursor [Homo sapiens] >gi|118295|sp|P17707|DCAM_HUMAN S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) >gi|68177|pir||DCHUDM adenosylmethionine decarboxylase (EC 4.1.1.50) precursor - human >gi|178518|gb|AAA51716.1| (M21154) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) old gene name 'AMD' [Homo sapiens] Length = 334 Frame 1 hits (HSPs): ______________ __________________________________________________ Database sequence: | | | | 334 0 150 300 Plus Strand HSPs: Score = 115 (40.5 bits), Expect = 2.6e-05, P = 2.6e-05 Identities = 33/91 (36%), Positives = 48/91 (52%), Frame = +1 Query: 25 GAGSNAYILGGQDKAQNWHVYSAS---AXSVTQCDNVXTLEMCMTGLDREKAQVFYKEQS 195 GAG Y +G + + W++Y+ + ++Q D TLE+ M+ LD FY + Sbjct: 144 GAG---YCMGRMN-SDCWYLYTLDFPESRVISQPDQ--TLEILMSELDPAVMDQFYMKDG 197 Query: 196 AXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMN 297 A +T SGIR ++ S I F PCGYSMN Sbjct: 198 VTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMN 231 >gi|1706314|sp|P50243|DCAM_BOVIN S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) >gi|162623|gb|AAA30359.1| (M95605) S-adenosylmethionine decarboxylase [Bos taurus] Length = 334 Frame 1 hits (HSPs): ______________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 334 0 150 300 __________________ Annotated Domains: DOMO DM01913: S-ADENOSYLMETHIONINEDECARBOXYLA 39..333 Entrez other site: CLEAVAGE (NONHYDROLYTICAL). 67..68 Entrez modified site: CONVERTED TO A PYRUVOYL G 68 Entrez active site: IMPORTANT FOR CATALYTIC ACT 8 Entrez active site: IMPORTANT FOR CATALYTIC ACT 11 Entrez active site: IMPORTANT FOR CATALYTIC ACT 82 PFAM SAM_decarbox: Adenosylmethionine decarbo 1..329 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 2..328 __________________ Plus Strand HSPs: Score = 115 (40.5 bits), Expect = 2.6e-05, P = 2.6e-05 Identities = 31/86 (36%), Positives = 45/86 (52%), Frame = +1 Query: 40 AYILGGQDKAQNWHVYSAS---AXSVTQCDNVXTLEMCMTGLDREKAQVFYKEQSAXAAM 210 AY +G + + W++Y+ + + Q D TLE+ M+ LD FY + A Sbjct: 146 AYCMGRMN-SDCWYLYTLDFPESRVINQPDQ--TLEILMSELDPAVMDQFYMKDGVTAKD 202 Query: 211 MTXNSGIRKILXDSEICDFDFEPCGYSMN 297 +T SGIR ++ S I F PCGYSMN Sbjct: 203 VTRESGIRDLIPGSVIDATMFNPCGYSMN 231 >gi|8567328 ref|NP_031470.2| s-adenosylmethionine decarboxylase 2 [Mus musculus] >gi|1071905|pir||A55948 adenosylmethionine decarboxylase (EC 4.1.1.50) precursor - mouse >gi|396141|emb|CAA80614.1| (Z23077) S-adenosylmethionine decarboxylase [Mus musculus] Length = 334 Frame 1 hits (HSPs): ______________ __________________________________________________ Database sequence: | | | | 334 0 150 300 Plus Strand HSPs: Score = 115 (40.5 bits), Expect = 2.6e-05, P = 2.6e-05 Identities = 31/86 (36%), Positives = 46/86 (53%), Frame = +1 Query: 40 AYILGGQDKAQNWHVYSAS---AXSVTQCDNVXTLEMCMTGLDREKAQVFYKEQSAXAAM 210 AY +G + + W++Y+ + ++Q D TLE+ M+ LD FY + A Sbjct: 146 AYCMGRMN-SDCWYLYTLDFPESRVISQPDQ--TLEILMSELDPAVMDQFYMKDGVTAKD 202 Query: 211 MTXNSGIRKILXDSEICDFDFEPCGYSMN 297 +T SGIR ++ S I F PCGYSMN Sbjct: 203 VTRESGIRDLIPGSVIDATLFNPCGYSMN 231 >gi|5668582|gb|AAD45965.1|AF052604_1 (AF052604) S-adenosylmethionine decarboxylase [Mus spretus] Length = 334 Frame 1 hits (HSPs): ______________ __________________________________________________ Database sequence: | | | | 334 0 150 300 Plus Strand HSPs: Score = 115 (40.5 bits), Expect = 2.6e-05, P = 2.6e-05 Identities = 31/86 (36%), Positives = 46/86 (53%), Frame = +1 Query: 40 AYILGGQDKAQNWHVYSAS---AXSVTQCDNVXTLEMCMTGLDREKAQVFYKEQSAXAAM 210 AY +G + + W++Y+ + ++Q D TLE+ M+ LD FY + A Sbjct: 146 AYCMGRMN-SDCWYLYTLDFPESRVISQPDQ--TLEILMSELDPAVMDQFYMKDGVTAKD 202 Query: 211 MTXNSGIRKILXDSEICDFDFEPCGYSMN 297 +T SGIR ++ S I F PCGYSMN Sbjct: 203 VTRESGIRDLIPGSVIDATLFNPCGYSMN 231 >gi|399341|sp|P17708|DCAM_RAT S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) >gi|206844|gb|AAA42105.1| (M64274) S-adenosylmethionine decarboxylase [Rattus norvegicus] >gi|818018|emb|CAA78814.1| (Z15109) S-adenosylmethionine decarboxylase [Rattus norvegicus] Length = 333 Frame 1 hits (HSPs): ______________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 333 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL). 67..68 Entrez modified site: CONVERTED TO A PYRUVOYL G 68 Entrez active site: IMPORTANT FOR CATALYTIC ACT 8 Entrez active site: IMPORTANT FOR CATALYTIC ACT 11 Entrez active site: IMPORTANT FOR CATALYTIC ACT 82 PFAM SAM_decarbox: Adenosylmethionine decarbo 1..329 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 2..328 __________________ Plus Strand HSPs: Score = 114 (40.1 bits), Expect = 3.3e-05, P = 3.3e-05 Identities = 31/86 (36%), Positives = 45/86 (52%), Frame = +1 Query: 40 AYILGGQDKAQNWHVYSAS---AXSVTQCDNVXTLEMCMTGLDREKAQVFYKEQSAXAAM 210 AY +G + + W++Y+ + + Q D TLE+ M+ LD FY + A Sbjct: 146 AYCMGRMN-SDCWYLYTLDLPESRVINQPDQ--TLEILMSELDPAVMDQFYMKDGVTAKD 202 Query: 211 MTXNSGIRKILXDSEICDFDFEPCGYSMN 297 +T SGIR ++ S I F PCGYSMN Sbjct: 203 VTRESGIRDLIPGSVIDATLFNPCGYSMN 231 >gi|118296|sp|P28918|DCAM_MESAU S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) >gi|68178|pir||DCHYDM adenosylmethionine decarboxylase (EC 4.1.1.50) precursor - golden hamster >gi|55522|emb|CAA45343.1| (X63861) S-adenosylmethionine decarboxylase [Mesocricetus auratus] Length = 334 Frame 1 hits (HSPs): ______________ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | 334 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL). 67..68 Entrez modified site: CONVERTED TO A PYRUVOYL G 68 Entrez active site: IMPORTANT FOR CATALYTIC ACT 8 Entrez active site: IMPORTANT FOR CATALYTIC ACT 11 Entrez active site: IMPORTANT FOR CATALYTIC ACT 82 PFAM SAM_decarbox: Adenosylmethionine decarbo 1..329 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 2..328 __________________ Plus Strand HSPs: Score = 114 (40.1 bits), Expect = 3.3e-05, P = 3.3e-05 Identities = 31/86 (36%), Positives = 45/86 (52%), Frame = +1 Query: 40 AYILGGQDKAQNWHVYSAS---AXSVTQCDNVXTLEMCMTGLDREKAQVFYKEQSAXAAM 210 AY +G + + W++Y+ + + Q D TLE+ M+ LD FY + A Sbjct: 146 AYCMGRMN-SDCWYLYTLDFPESRVINQPDQ--TLEILMSELDPAVMDQFYMKDGVTAKD 202 Query: 211 MTXNSGIRKILXDSEICDFDFEPCGYSMN 297 +T SGIR ++ S I F PCGYSMN Sbjct: 203 VTRESGIRDLIPGSVIDATLFNPCGYSMN 231 >gi|68179|pir||DCRTDM adenosylmethionine decarboxylase (EC 4.1.1.50) precursor - rat >gi|202755|gb|AAA40683.1| (M34464) S-adenosylmethionine decarboxylase (EC 4.1.1.50) [Rattus norvegicus] Length = 333 Frame 1 hits (HSPs): ______________ Annotated Domains: _ __________________________________________________ Database sequence: | | | | 333 0 150 300 __________________ Annotated Domains: Entrez modified site: pyruvic acid (Ser) (in ma 68 __________________ Plus Strand HSPs: Score = 113 (39.8 bits), Expect = 4.2e-05, P = 4.2e-05 Identities = 33/91 (36%), Positives = 47/91 (51%), Frame = +1 Query: 25 GAGSNAYILGGQDKAQNWHVYSAS---AXSVTQCDNVXTLEMCMTGLDREKAQVFYKEQS 195 GAG Y +G + + W++Y+ + + Q D TLE+ M+ LD FY + Sbjct: 144 GAG---YCMGRMN-SDCWYLYTLDLPESRVINQPDQ--TLEILMSELDPAVMDQFYMKDG 197 Query: 196 AXAAMMTXNSGIRKILXDSEICDFDFEPCGYSMN 297 A +T SGIR ++ S I F PCGYSMN Sbjct: 198 VTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMN 231 >gi|1706315|sp|P50244|DCAM_TRYBB S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) >gi|643570|gb|AAA61969.1| (U20092) S-adenosylmethionine decarboxylase [Trypanosoma brucei] Length = 370 Frame 1 hits (HSPs): ______________ Annotated Domains: ________________________________________________ __________________________________________________ Database sequence: | | | | 370 0 150 300 __________________ Annotated Domains: DOMO DM01913: S-ADENOSYLMETHIONINEDECARBOXYLA 17..361 Entrez other site: CLEAVAGE (NONHYDROLYTICAL) ( 85..86 Entrez modified site: CONVERTED TO A PYRUVOYL G 86 Entrez active site: IMPORTANT FOR CATALYTIC ACT 29 Entrez active site: IMPORTANT FOR CATALYTIC ACT 32 Entrez active site: IMPORTANT FOR CATALYTIC ACT 100 PFAM SAM_decarbox: Adenosylmethionine decarbo 22..354 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 22..343 PRODOM PD040959: DCAM_TRYBB 345..369 __________________ Plus Strand HSPs: Score = 112 (39.4 bits), Expect = 6.5e-05, P = 6.5e-05 Identities = 28/94 (29%), Positives = 50/94 (53%), Frame = +1 Query: 43 YILGGQDKAQNWHVYSASAXSVTQCDNVXTLEMCMTGLDREKAQVFYKEQ----SAXAAM 210 +I G D + ++ +Y S C + L M M GLDR + + +Y ++ A+ Sbjct: 163 FIFGPID-SDHYFLYLDSDVVQPSCSDDAQLSMTMYGLDRNQTKHWYSDKMLPTGPETAV 221 Query: 211 MTXNSGIRKILXDSEIC-DFDFEPCGYSMNSGEGA 312 + +G+ +++ DS I D +EPCGYS+N+ G+ Sbjct: 222 IREATGLSEVVDDSWILHDLQYEPCGYSINAIRGS 256 >gi|6014928|sp|O02655|DCAM_CAEEL S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME (ADOMETDC) >gi|7503697|pir||T22361 adenosylmethionine decarboxylase (EC 4.1.1.50) precursor [validated] - Caenorhabditis elegans >gi|1945725|emb|CAA73101.1| (Y12499) adenosylmethionine decarboxylase [Caenorhabditis elegans] >gi|1945727|emb|CAA73102.1| (Y12500) adenosylmethionine decarboxylase [Caenorhabditis elegans] >gi|3877349|emb|CAB16315.1| (Z99171) contains similarity to Pfam domain: PF01536 (Adenosylmethionine decarboxylase), Score=695.9, E-value=6.2e-206, N=1~cDNA EST EMBL:T00887 comes from this gene~cDNA EST yk176a7.5 comes from this gene~cDNA EST yk256f1.5 comes from this gene~cDNA E> >gi|3881303|emb|CAA19560.1| (AL023853) contains similarity to Pfam domain: PF01536 (Adenosylmethionine decarboxylase), Score=695.9, E-value=6.2e-206, N=1~cDNA EST EMBL:T00887 comes from this gene~cDNA EST yk176a7.5 comes from this gene~cDNA EST yk256f1.5 comes from this gene~cDNA> Length = 368 Frame 1 hits (HSPs): ______________ Annotated Domains: ______________________________________________ __________________________________________________ Database sequence: | | | | 368 0 150 300 __________________ Annotated Domains: Entrez other site: CLEAVAGE (NONHYDROLYTICAL). 82..83 Entrez modified site: CONVERTED TO A PYRUVOYL G 83 Entrez active site: IMPORTANT FOR CATALYTIC ACT 26 Entrez active site: IMPORTANT FOR CATALYTIC ACT 29 Entrez active site: IMPORTANT FOR CATALYTIC ACT 97 PFAM SAM_decarbox: Adenosylmethionine decarbo 19..350 PRODOM PD002379: DCAM(26) DCA1(2) DCA2(2) 19..348 __________________ Plus Strand HSPs: Score = 109 (38.4 bits), Expect = 0.00014, P = 0.00014 Identities = 32/99 (32%), Positives = 49/99 (49%), Frame = +1 Query: 10 YFGKLGAGSNAYILGGQDKAQNWHVYS----ASAXSVTQCDNVXTLEMCMTGLDREKAQV 177 Y +AY LG K W++Y+ + Q D+ TLE+ M+ LD E Sbjct: 151 YLDSFFVDGHAYCLGSL-KQDRWYLYTFHREVEFPAHKQPDH--TLEILMSDLDEEVLHK 207 Query: 178 FYKEQSAXAAMMTXNSGIRKIL-XDSEICDFDFEPCGYSMNS 300 F K+ + +GI KI+ +++ D F+PCGYSMN+ Sbjct: 208 FTKDYAVDGNDCFMRAGIDKIIPAGADVHDELFDPCGYSMNA 249 >gi|3328196|gb|AAC26796.1| (AF075243) S-adenosylmethionine decarboxylase [Trypanosoma cruzi] Length = 370 Frame 1 hits (HSPs): ___________ __________________________________________________ Database sequence: | | | | 370 0 150 300 Plus Strand HSPs: Score = 98 (34.5 bits), Expect = 0.0022, P = 0.0022 Identities = 23/72 (31%), Positives = 39/72 (54%), Frame = +1 Query: 112 QCDNVXTLEMCMTGLDREKAQVFYKEQ----SAXAAMMTXNSGIRKILXDS-EICDFDFE 276 + +N L M M GLDR + + ++ ++ A + + + K+ DS ++ D FE Sbjct: 186 ETENDTQLSMTMYGLDRTQTKHWFSDRFISTGTETAAIRKATKLNKVADDSWKLHDLQFE 245 Query: 277 PCGYSMNSGEGA 312 PCGYS+N+ GA Sbjct: 246 PCGYSINTIRGA 257 WARNING: HSPs involving 7 database sequences were not reported due to the limiting value of parameter B = 50. Parameters: filter=none matrix=BLOSUM62 V=50 B=50 E=10 gi H=1 sort_by_pvalue echofilter ctxfactor=5.90 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H Std. 0 BLOSUM62 0.318 0.135 0.401 +3 0 BLOSUM62 0.318 0.135 0.401 0.372 0.165 0.814 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a +2 0 BLOSUM62 0.318 0.135 0.401 0.362 0.158 0.525 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a +1 0 BLOSUM62 0.314 0.130 0.385 same same same Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -1 0 BLOSUM62 0.318 0.135 0.401 0.348 0.149 0.511 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -2 0 BLOSUM62 0.318 0.135 0.401 0.327 0.131 0.428 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -3 0 BLOSUM62 0.318 0.135 0.401 0.340 0.142 0.451 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +3 0 115 106 10. 69 3 12 22 0.11 32 29 0.11 34 +2 0 115 107 10. 69 3 12 22 0.12 32 29 0.12 34 +1 0 115 107 10. 69 3 12 23 0.12 32 29 0.12 34 -1 0 115 108 10. 69 3 12 22 0.12 32 29 0.12 34 -2 0 115 106 10. 69 3 12 22 0.11 32 29 0.11 34 -3 0 115 107 10. 69 3 12 22 0.12 32 29 0.12 34 Statistics: Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr Title: nr Release date: unknown Posted date: 4:06 PM CST Feb 28, 2001 Format: BLAST # of letters in database: 197,782,623 # of sequences in database: 625,274 # of database sequences satisfying E: 57 No. of states in DFA: 589 (58 KB) Total size of DFA: 157 KB (192 KB) Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00 No. of threads or processors used: 6 Search cpu time: 104.25u 0.84s 105.09t Elapsed: 00:00:41 Total cpu time: 104.27u 0.89s 105.16t Elapsed: 00:00:41 Start: Wed Feb 6 14:58:59 2002 End: Wed Feb 6 14:59:40 2002 WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000