WU-BLAST 2.0 search of the National Center for Biotechnology Information's NR Protein Database.
BEAUTY post-processing provided by the Human Genome Sequencing Center, Baylor College of Medicine.
BEAUTY Reference:
Worley KC, Culpepper P, Wiese BA, Smith RF. BEAUTY-X: enhanced BLAST searches for DNA queries. Bioinformatics 1998;14(10):890-1. Abstract
Worley KC, Wiese BA, Smith RF. BEAUTY: an enhanced BLAST-based search tool that integrates multiple biological information resources into sequence similarity search results. Genome Res 1995 Sep;5(2):173-84 Abstract
Checking for E. coli insertion elements Checking for E. coli insertion elementsMasked Sequence:
>'E14B05_D05_03.ab1' CGGCCGGGNATTGGATTGATCAATTAGTAGCAGCCGCAACAGCTTCTTAT CTCCTTTACTACCTCTCAGGAGGACAGGCAACTCCAGTTCATACGCTGGC CAGTGGAGTGGGGTATGGTCAAGGAGTAGTTTGGGAGATTGTGTTGACGT TTTCTTTGTTGTTCACTGTGTATGCGACCATGGTGGATCCCAAGAAGGGA GCACTTGCTGGGCTTGGGCCAACGCTGGTTGGGTTTGTGGTTGGGGCCAA CATCCTCGCAGGTGGGGCTTACTCTGCTGCTTCTATGAACCCAGCAAGGT CTTTTGGGCCCTGCCTTGGTCGCTGGAAACTGGACCGATCATTGGGCCTA CTGGGTTGGGCCTCTCATTGGTGGTGGCCTTGCTGGTTACATCTATGAGA CTTTCNTTCATTGACCGATCTCATGTTCCACTTCCTCGTGATGAAGAAAA CTAAACAATAGGATTGACAACTTGCACTTTCATCCCTTCTTAAAAAATGC TGCATTATTGTAGTTAATTTAATCTAATAAT