Uses of Class
nix.util.bio.annotation.Exon

Packages that use Exon

nix.gata.main
nix.util.bio.annotation

Uses of Exon in nix.gata.main

Methods in nix.gata.main with parameters of type Exon

static java.util.ArrayList	GATAUtil.extractStartEnds(Exon[] exons) Deep copies start stops from Exon objects to an ArrayList
static int[][]	GATAUtil.extractStartEndsInts(Exon[] exons)

Uses of Exon in nix.util.bio.annotation

Methods in nix.util.bio.annotation that return Exon

Exon[]

TransGroup.getExons()

Methods in nix.util.bio.annotation with parameters of type Exon

static int[][]	GeneGroup.extractStartEndsInts(Exon[] exons)
static java.util.ArrayList	GeneGroup.extractStartEnds(Exon[] exons)

Constructors in nix.util.bio.annotation with parameters of type Exon

TransGroup(Transcript transcript, Translation translation, Exon[] exons)