R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|12321303|gb|AAG50724.1|AC079041_17 (AC079041) ABC transporter, putative
[Arabidopsis thaliana]
Length = 646
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | | 646
0 150 300 450 600
Plus Strand HSPs:
Score = 593 (208.7 bits), Expect = 1.1e-56, P = 1.1e-56
Identities = 117/185 (63%), Positives = 140/185 (75%), Frame = +2
Query: 2 VRESLISAYEKNIATRLKAEVCSLEANNYNITKDACARNSIKPDQWCTSWWHQFKVLLQR 181
V+E+L+SAYEKNI+T+LKAE+C+ E+++Y TK A A+N +K +QWCT+WW+QF VLLQR
Sbjct: 333 VKETLVSAYEKNISTKLKAELCNAESHSYEYTK-AAAKN-LKSEQWCTTWWYQFTVLLQR 390
Query: 182 GVRERRYEAFNRLRIFQVVSVAFLGGLLWWHTPXSHIDDRVALLFFFSVFWGFYPLYNAV 361
GVRERR+E+FN+LRIFQV+SVAFLGGLLWWHTP SHI DR ALLFFFSVFWGFYPLYNAV
Sbjct: 391 GVRERRFESFNKLRIFQVISVAFLGGLLWWHTPKSHIQDRTALLFFFSVFWGFYPLYNAV 450
Query: 362 FTFPQEKXMLIXGTVFGNLPPFLPYFLAXTIGXLPLGPCXTNCFVSXSXGWKG*--PDPR 535
FTFPQEK MLI G + YF+A +G LPL FV W G PDP
Sbjct: 451 FTFPQEKRMLIKERSSG-MYRLSSYFMARNVGDLPLELALPTAFVFIIY-WMGGLKPDPT 508
Query: 536 LYPSLLL 556
+ LL
Sbjct: 509 TFILSLL 515
>gi|12597842|gb|AAG60152.1|AC074360_17 (AC074360) hypothetical protein
[Arabidopsis thaliana]
Length = 648
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | | 648
0 150 300 450 600
Plus Strand HSPs:
Score = 593 (208.7 bits), Expect = 1.1e-56, P = 1.1e-56
Identities = 117/185 (63%), Positives = 140/185 (75%), Frame = +2
Query: 2 VRESLISAYEKNIATRLKAEVCSLEANNYNITKDACARNSIKPDQWCTSWWHQFKVLLQR 181
V+E+L+SAYEKNI+T+LKAE+C+ E+++Y TK A A+N +K +QWCT+WW+QF VLLQR
Sbjct: 335 VKETLVSAYEKNISTKLKAELCNAESHSYEYTK-AAAKN-LKSEQWCTTWWYQFTVLLQR 392
Query: 182 GVRERRYEAFNRLRIFQVVSVAFLGGLLWWHTPXSHIDDRVALLFFFSVFWGFYPLYNAV 361
GVRERR+E+FN+LRIFQV+SVAFLGGLLWWHTP SHI DR ALLFFFSVFWGFYPLYNAV
Sbjct: 393 GVRERRFESFNKLRIFQVISVAFLGGLLWWHTPKSHIQDRTALLFFFSVFWGFYPLYNAV 452
Query: 362 FTFPQEKXMLIXGTVFGNLPPFLPYFLAXTIGXLPLGPCXTNCFVSXSXGWKG*--PDPR 535
FTFPQEK MLI G + YF+A +G LPL FV W G PDP
Sbjct: 453 FTFPQEKRMLIKERSSG-MYRLSSYFMARNVGDLPLELALPTAFVFIIY-WMGGLKPDPT 510
Query: 536 LYPSLLL 556
+ LL
Sbjct: 511 TFILSLL 517
>gi|11994752|dbj|BAB03081.1| (AP001313) ABC transporter-like protein
[Arabidopsis thaliana]
Length = 672
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | | 672
0 150 300 450 600
Plus Strand HSPs:
Score = 414 (145.7 bits), Expect = 3.3e-37, P = 3.3e-37
Identities = 86/186 (46%), Positives = 119/186 (63%), Frame = +2
Query: 2 VRESLISAYEKNIATRLKAEVCSLEANNYNITKDACARNSIKPDQWCTSWWHQFKVLLQR 181
V++SLIS+Y+KN+ LK EV + +A R ++W TSWW QF VLL+R
Sbjct: 363 VKQSLISSYKKNLYPPLKEEVSRTFPQDQT---NARLRKKAITNRWPTSWWMQFSVLLKR 419
Query: 182 GVRERRYEAFNRLRIFQVVSVAFLGGLLWWHTPXSHIDDRVALLFFFSVFWGFYPLYNAV 361
G++ER +E+F+ LRIF V+SV+ L GLLWWH+ +H+ D+V LLFFFS+FWGF+PL+NA+
Sbjct: 420 GLKERSHESFSGLRIFMVMSVSLLSGLLWWHSRVAHLQDQVGLLFFFSIFWGFFPLFNAI 479
Query: 362 FTFPQEKXMLIXGTVFGNLPPFLPYFLAXTIGXLPLGPCXTNCFVSXSXGWKG*PDPRLY 541
FTFPQE+ MLI G + Y++A T+G LP+ FV+ + W G L
Sbjct: 480 FTFPQERPMLIKERSSG-IYRLSSYYIARTVGDLPMELILPTIFVTITY-WMG----GLK 533
Query: 542 PSLLLF 559
PSL F
Sbjct: 534 PSLTTF 539
>gi|7486255|pir||T08934 hypothetical protein F27G19.20 - Arabidopsis thaliana
>gi|4972067|emb|CAB43874.1| (AL078467) putative protei [Arabidopsis
thaliana] >gi|7269596|emb|CAB81392.1| (AL161571) putative protein
[Arabidopsis thaliana]
Length = 635
Frame 2 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | | 635
0 150 300 450 600
Plus Strand HSPs:
Score = 316 (111.2 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 60/165 (36%), Positives = 100/165 (60%), Frame = +2
Query: 2 VRESLISAYEKNIATRLKAEVCSLEANNYNITKDACARNSIKPDQWCTSWWHQFKVLLQR 181
++ +L++ Y+ N+ + EV + + N +++ + W T+WW QF VLL+R
Sbjct: 316 MKAALVAFYKTNLLDSVINEVKGQD-DLCNKPRESSRVATNTYGDWPTTWWQQFCVLLKR 374
Query: 182 GVRERRYEAFNRLRIFQVVSVAFLGGLLWWHTPXSHIDDRVALLFFFSVFWGFYPLYNAV 361
G+++RR+++F+ +++ Q+ V+FL GLLWW T S + D++ LLFF S FW F+PL+ +
Sbjct: 375 GLKQRRHDSFSGMKVAQIFIVSFLCGLLWWQTKISRLQDQIGLLFFISSFWAFFPLFQQI 434
Query: 362 FTFPQEKXMLIXGTVFGNLPPFLPYFLAXTIGXLPLGPCXTNCFV 496
FTFPQE+ ML G + PYFL+ +G LP+ CF+
Sbjct: 435 FTFPQERAMLQKERSSG-MYRLSPYFLSRVVGDLPMELILPTCFL 478
>gi|10178109|dbj|BAB11402.1| (AP002543) ABC transporter-like protein
[Arabidopsis thaliana]
Length = 567
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | 567
0 150 300 450
Plus Strand HSPs:
Score = 299 (105.3 bits), Expect = 7.4e-25, P = 7.4e-25
Identities = 64/156 (41%), Positives = 95/156 (60%), Frame = +2
Query: 2 VRESLISAYEKNIATRLKAEVCSLEANNYNITKDACARNSIKPDQWCTSWWHQFKVLLQR 181
V E L+ AYE +A + K ++ + + ++A A+++ QW T WW Q+ +L R
Sbjct: 327 VHEYLVEAYETRVAEQEKKKLL----DPVPLDEEAKAKSTRLKRQWGTCWWEQYCILFCR 382
Query: 182 GVRERRYEAFNRLRIFQVVSVAFLGGLLWWH----TPXSHIDDRVALLFFFSVFWGFYPL 349
G++ERR+E F+ LR+ QV+S A + GLLWW TP + D+ LLFF +VFWGF+P+
Sbjct: 383 GLKERRHEYFSWLRVTQVLSTAVILGLLWWQSDIRTPMG-LQDQAGLLFFIAVFWGFFPV 441
Query: 350 YNAVFTFPQEKXMLIXGTVFGNLPPFLPYFLAXTIGXLPL 469
+ A+F FPQE+ ML ++ YFLA T LPL
Sbjct: 442 FTAIFAFPQERAMLNKERA-ADMYRLSAYFLARTTSDLPL 480
>gi|12324545|gb|AAG52231.1|AC021665_14 (AC021665) putative ABC transporter;
60211-54925 [Arabidopsis thaliana]
Length = 609
Frame 2 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | || 609
0 150 300 450 600
Plus Strand HSPs:
Score = 299 (105.3 bits), Expect = 9.4e-25, P = 9.4e-25
Identities = 68/184 (36%), Positives = 103/184 (55%), Frame = +2
Query: 2 VRESLISAYEKNIATRLKA--EVCSLEANNYNITKDACARNSIKPDQWC-TSWWHQFKVL 172
VR++L++AY+ +A ++K EV +N K I C +W+ Q +L
Sbjct: 284 VRQTLVTAYDTLLAPQVKTCIEVSHFPQDNARFVKTRVNGGGITT---CIATWFSQLCIL 340
Query: 173 LQRGVRERRYEAFNRLRIFQVVSVAFLGGLLWWHTPXSHIDDRVALLFFFSVFWGFYPLY 352
L R ++ERR+E+F+ LRIFQVV+ + L GL+WWH+ + DR+ LLFF S+FWG P +
Sbjct: 341 LHRLLKERRHESFDLLRIFQVVAASILCGLMWWHSDYRDVHDRLGLLFFISIFWGVLPSF 400
Query: 353 NAVFTFPQEKXMLIXGTVFGNLPPFLPYFLAXTIGXLPLGPCXTNCFVSXSXGWKG*PDP 532
NAVFTFPQE+ + G + YF+A +G L + F++ + W P
Sbjct: 401 NAVFTFPQERAIFTRERASG-MYTLSSYFMAHVLGSLSMELVLPASFLTFTY-WMVYLRP 458
Query: 533 RLYPSLL 553
+ P LL
Sbjct: 459 GIVPFLL 465
>gi|11357151|pir||T46101 ABC transporter-like protein - Arabidopsis thaliana
>gi|10045564|emb|CAC07922.1| (AL132972) ABC transporter-like
protein [Arabidopsis thaliana]
Length = 737
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 737
0 150 300 450 600
Plus Strand HSPs:
Score = 271 (95.4 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 52/112 (46%), Positives = 72/112 (64%), Frame = +2
Query: 134 QWCTSWWHQFKVLLQRGVRERRYEAFNRLRIFQVVSVAFLGGLLWWHTP-XSHIDDRVAL 310
+W SWW Q+ +L RG++ERR++ F+ LR+ QV+S A + GLLWW + S R L
Sbjct: 477 EWGLSWWEQYCLLSLRGIKERRHDYFSWLRVTQVLSTAIILGLLWWQSDITSQRPTRSGL 536
Query: 311 LFFFSVFWGFYPLYNAVFTFPQEKXMLIXGTVFGNLPPFLPYFLAXTIGXLPL 469
LFF +VFWGF+P++ A+FTFPQE+ ML N+ YF+A T LPL
Sbjct: 537 LFFIAVFWGFFPVFTAIFTFPQERAMLSKERE-SNMYRLSAYFVARTTSDLPL 588
>gi|10172610|dbj|BAB01414.1| (AP000375) ABC transporter-like protein
[Arabidopsis thaliana]
Length = 693
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 693
0 150 300 450 600
Plus Strand HSPs:
Score = 212 (74.6 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 40/93 (43%), Positives = 59/93 (63%), Frame = +2
Query: 122 IKPDQWCTSWWHQFKVLLQRGVRERRYEAFNRLRIFQVVSVAFLGGLLWWHTPX---SHI 292
+K D W SWW QF +L +R RERR + F++LR+ Q + VA + GLLWW + +H+
Sbjct: 412 VKKD-WTLSWWDQFLILSRRTFRERRRDYFDKLRLVQSLGVAVVLGLLWWKSKTDTEAHL 470
Query: 293 DDRVALLFFFSVFWGFYPLYNAVFTFPQEKXMLI 394
D+V L+F+ +FW L+ AV+ FP EK L+
Sbjct: 471 RDQVGLMFYICIFWTSSSLFGAVYVFPFEKIYLV 504
>gi|7295821|gb|AAF51122.1| (AE003580) CG3327 gene product [Drosophila
melanogaster]
Length = 729
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | 729
0 150 300 450 600
Plus Strand HSPs:
Score = 142 (50.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 39/147 (26%), Positives = 66/147 (44%), Frame = +2
Query: 131 DQWC---TSWWHQFKVLLQRGVRERRYEAFNRLRIFQVVSVAFLGGLLWWHTPXSH--ID 295
D W TS+ QF VL R RE + ++L FQ + +A + G +W+ P + +
Sbjct: 440 DDWLSYPTSFHTQFCVLSSRNFREAKPRMLSKLNWFQTIGLALMAGAIWFQLPRTEEFLH 499
Query: 296 DRVALLFFFSVFWGFYPLYNAVFTFPQEKXMLIXGTVFGNLPPFLPYFLAXTIGXLPLGP 475
D +FF +W + L+ A+ +FP E+ ++ G Y+LA LPL
Sbjct: 500 DLQGWMFFSQTYWMLFALFGALNSFPSEREVVSKERRSGAYR-LSAYYLAKMCAELPLVI 558
Query: 476 CXTNCFVSXSXGWKG*PDPRLYPSLLLF 559
++ S G +L+ +L+F
Sbjct: 559 TLPTVYLMISYPMLGCTSLKLFFLMLIF 586
>gi|9930140|gb|AAG02041.1| (AF270979) E23 [Drosophila melanogaster]
Length = 856
Frame 2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | | 856
0 150 300 450 600 750
Plus Strand HSPs:
Score = 136 (47.9 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 38/147 (25%), Positives = 65/147 (44%), Frame = +2
Query: 131 DQWC---TSWWHQFKVLLQRGVRERRYEAFNRLRIFQVVSVAFLGGLLWWHTPXSH--ID 295
D W TS+ Q VL R RE + ++L FQ + +A + G +W+ P + +
Sbjct: 567 DDWLSYPTSFHTQLCVLSSRNFREAKPRMLSKLNWFQTIGLALMAGAIWFQLPRTEEFLH 626
Query: 296 DRVALLFFFSVFWGFYPLYNAVFTFPQEKXMLIXGTVFGNLPPFLPYFLAXTIGXLPLGP 475
D +FF +W + L+ A+ +FP E+ ++ G Y+LA LPL
Sbjct: 627 DLQGWMFFSQTYWMLFALFGALNSFPSEREVVSKERRSGAYR-LSAYYLAKMCAELPLVI 685
Query: 476 CXTNCFVSXSXGWKG*PDPRLYPSLLLF 559
++ S G +L+ +L+F
Sbjct: 686 TLPTVYLMISYPMLGCTSLKLFFLMLIF 713
>gi|4262239|gb|AAD14532.1| (AC006200) putative ABC transporter [Arabidopsis
thaliana]
Length = 725
Frame 2 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | | 725
0 150 300 450 600
Plus Strand HSPs:
Score = 123 (43.3 bits), Expect = 0.00033, P = 0.00033
Identities = 49/187 (26%), Positives = 83/187 (44%), Frame = +2
Query: 11 SLISAYEKNIATRLKAEVCSLEANNYNITKDACARNSIKPDQWCTSWWHQFKVLLQRG-V 187
+L+ A+ + ++ L A S++ N + R +I + WW QF +LL+R +
Sbjct: 348 ALVDAFSQRSSSVLYATPLSMKEETKNGMRPR--RKAIV--ERTDGWWRQFFLLLKRAWM 403
Query: 188 RERRYEAFNRLRIFQVVSVAFLGGLLWWHTPXSH--IDDRVALLFFFSVFWGFYPLYNAV 361
+ R N++R V+ A + G ++W S I DR+ LL ++ L V
Sbjct: 404 QASRDGPTNKVRARMSVASAVIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAALTKTV 463
Query: 362 FTFPQEKXMLIXGTVFGNLPPFLPYFLAXTIGXLPLGPCXTNCFVSXSXGWKG*PDPRLY 541
FP+E+ ++ G+ PY L+ TI +P+G F + P RL
Sbjct: 464 GVFPKERAIVDRERSKGSYS-LGPYLLSKTIAEIPIGAAFPLMFGAVLY-----PMARLN 517
Query: 542 PSLLLFXTCC 571
P+L F C
Sbjct: 518 PTLSRFGKFC 527
>gi|5714366|dbj|BAA83106.1| (AB030450) ABC transporter [Drosophila
melanogaster]
Length = 832
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | | 832
0 150 300 450 600 750
Plus Strand HSPs:
Score = 109 (38.4 bits), Expect = 0.021, P = 0.020
Identities = 35/120 (29%), Positives = 58/120 (48%), Frame = +2
Query: 143 TSWWHQFKVLLQRGVRE-RRYEAFNRLRIFQVVSVAFLGGLLWWHT--PXSHIDDRVALL 313
TS W QF +LL+R R R + +R+F V V + G++++ S I +
Sbjct: 555 TSGWTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAIIGMIYYDVGNEASKIMSNAGCI 614
Query: 314 FFFSVFWGFYPLYNAVFTFPQEKXMLIXGTV--FGNLPPFLPYFLAXTIGXLPLGPCXTN 487
FF S+F F + + TFP E + + + + +L F YF A TI +P ++
Sbjct: 615 FFVSLFTTFTAMMPTILTFPTEMSVFVREHLNYWYSLKAF--YF-AKTIADMPFQIVFSS 671
Query: 488 CFV 496
+V
Sbjct: 672 VYV 674
>gi|7295722|gb|AAF51027.1| (AE003576) Atet gene product [Drosophila
melanogaster]
Length = 832
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | | 832
0 150 300 450 600 750
Plus Strand HSPs:
Score = 109 (38.4 bits), Expect = 0.021, P = 0.020
Identities = 35/120 (29%), Positives = 58/120 (48%), Frame = +2
Query: 143 TSWWHQFKVLLQRGVRE-RRYEAFNRLRIFQVVSVAFLGGLLWWHT--PXSHIDDRVALL 313
TS W QF +LL+R R R + +R+F V V + G++++ S I +
Sbjct: 555 TSGWTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAIIGMIYYDVGNEASKIMSNAGCI 614
Query: 314 FFFSVFWGFYPLYNAVFTFPQEKXMLIXGTV--FGNLPPFLPYFLAXTIGXLPLGPCXTN 487
FF S+F F + + TFP E + + + + +L F YF A TI +P ++
Sbjct: 615 FFVSLFTTFTAMMPTILTFPTEMSVFVREHLNYWYSLKAF--YF-AKTIADMPFQIVFSS 671
Query: 488 CFV 496
+V
Sbjct: 672 VYV 674
>gi|9626075 ref|NP_040315.1| E5 protein [Human papillomavirus type 18]
>gi|137736|sp|P06792|VE5_HPV18 PROBABLE E5 PROTEIN
>gi|73457|pir||W5WL18 E5 protein - human papillomavirus type 18
>gi|60981|emb|CAA28669.1| (X05015) E5 protein [Human papillomavirus
type 18]
Length = 73
Frame 1 hits (HSPs): _______________________________
__________________________________________________
Database sequence: | | | | | 73
0 20 40 60
Plus Strand HSPs:
Score = 64 (22.5 bits), Expect = 4.1, P = 0.98
Identities = 16/47 (34%), Positives = 24/47 (51%), Frame = +1
Query: 226 IPS-CKCRFSRWTIVVAYSXVTH**SGCLALFLFCFLGILPSLQCSFH 366
+PS C C ++ W +V Y V + +++FCFL LP L H
Sbjct: 23 LPSVCMCAYA-WVLVFVYIVVITSPATAFTVYVFCFL--LPMLLLHIH 67
>gi|7495394|pir||T29595 hypothetical protein C04G6.5 - Caenorhabditis elegans
>gi|1280145|gb|AAA98012.1| (U55854) similar to barley blt101
salt-stress induced hydrophobic protein (PIR:S40406)
[Caenorhabditis elegans]
Length = 59
Frame 2 hits (HSPs): ___________________________________________
__________________________________________________
Database sequence: | | | | 59
0 20 40
Plus Strand HSPs:
Score = 63 (22.2 bits), Expect = 5.2, P = 0.99
Identities = 17/50 (34%), Positives = 26/50 (52%), Frame = +2
Query: 224 IFQVVSVAFLGGL-LWWHTPXSHIDDRVALLFFFSVFW--GF-YPLYNAVF 364
I +V+ FL L +WWHT I+ + ++F +FW G Y +Y F
Sbjct: 8 IIEVILCIFLPPLAIWWHTKECDINVLIDIIFCL-LFWLPGILYAVYICFF 57
>gi|11361659|pir||D82722 hypothetical protein XF1100 [imported] - Xylella
fastidiosa (strain 9a5c) >gi|9106055|gb|AAF83910.1|AE003946_1
(AE003946) hypothetical protein [Xylella fastidiosa]
Length = 73
Frame 2 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | 73
0 20 40 60
Plus Strand HSPs:
Score = 62 (21.8 bits), Expect = 6.7, P = 1.0
Identities = 9/19 (47%), Positives = 15/19 (78%), Frame = +2
Query: 287 HIDDRVALLFFFSVFWGFY 343
++D+R+ L FF+S+FW Y
Sbjct: 27 YLDERLLLRFFYSIFWNNY 45
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.96
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.349 0.157 0.545
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.334 0.147 0.529
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.343 0.149 0.498
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.355 0.156 0.547
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.336 0.148 0.487
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.347 0.152 0.500
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 206 198 10. 76 3 12 22 0.093 35
31 0.10 38
+2 0 206 196 10. 76 3 12 22 0.092 35
31 0.10 38
+1 0 206 197 10. 76 3 12 22 0.092 35
31 0.10 38
-1 0 206 195 10. 76 3 12 22 0.091 35
31 0.10 38
-2 0 206 197 10. 76 3 12 22 0.092 35
31 0.10 38
-3 0 206 197 10. 76 3 12 22 0.092 35
31 0.10 38
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 16
No. of states in DFA: 597 (59 KB)
Total size of DFA: 213 KB (256 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 194.73u 1.02s 195.75t Elapsed: 00:00:54
Total cpu time: 194.77u 1.05s 195.82t Elapsed: 00:00:54
Start: Mon Oct 1 22:49:33 2001 End: Mon Oct 1 22:50:27 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000