BLAST Search Results BLASTP 2.2.4 [Aug-26-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= HCMV043 (360 letters) Database: nr 1,508,275 sequences; 485,782,529 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value gi|9625714|ref|NP_039963.1| UL29 [Human herpesvirus 5] >gnl|BL_O... 735 0.0 gi|20026632|ref|NP_612673.1| UL29 [Chimpanzee cytomegalovirus] >... 563 e-159 gi|3789992|gb|AAC67573.1| hypothetical protein UL29 [Rhesus cyto... 432 e-120 gi|31377927|gb|AAP50577.1| rh50 [Rhesus cytomegalovirus strain 6... 431 e-119 gi|14251013|ref|NP_116375.1| T29 [Tupaia herpesvirus] >gnl|BL_OR... 179 6e-44 gi|9628731|ref|NP_043762.1| Hypothetical protein [Human herpesvi... 84 4e-15 gi|9628308|ref|NP_042899.1| Hypothetical protein [Human herpesvi... 67 6e-10 gi|11280654|pir||T43967 hypothetical protein U8 [imported] - hum... 61 3e-08 gi|9633081|ref|NP_050189.1| Hypothetical protein [Human herpesvi... 61 3e-08 gi|9845327|ref|NP_064141.1| pR36 [Rat cytomegalovirus] >gnl|BL_O... 47 4e-04>gi|9625714|ref|NP_039963.1| UL29 [Human herpesvirus 5] gi|136871|sp|P16764|UL29_HCMVA HYPOTHETICAL PROTEIN UL29 gi|76552|pir||S09792 hypothetical protein UL29 - human cytomegalovirus (strain AD169) gi|59634|emb|CAA35428.1| HCMVUL29 [Human herpesvirus 5] gi|27808763|tpg|DAA00133.1| TPA: UL29 [Human herpesvirus 5] gi|29423462|gb|AAO73458.1| UL29 [Human herpesvirus 5] Length = 360 Score = 735 bits (1898), Expect = 0.0 Identities = 360/360 (100%), Positives = 360/360 (100%) Query: 1 MSGRRKGCSAATASSSSSSPPSRLPPLPGHARRPRRKRCLVPEVFCTRDLADLCVRRDYE 60 MSGRRKGCSAATASSSSSSPPSRLPPLPGHARRPRRKRCLVPEVFCTRDLADLCVRRDYE Sbjct: 1 MSGRRKGCSAATASSSSSSPPSRLPPLPGHARRPRRKRCLVPEVFCTRDLADLCVRRDYE 60 Query: 61 GLRRYLRRFEGSCVSLGWPSQCIYVVGGEHSPHSLTEIDLEHCQNDFFGEFRALHLIGTV 120 GLRRYLRRFEGSCVSLGWPSQCIYVVGGEHSPHSLTEIDLEHCQNDFFGEFRALHLIGTV Sbjct: 61 GLRRYLRRFEGSCVSLGWPSQCIYVVGGEHSPHSLTEIDLEHCQNDFFGEFRALHLIGTV 120 Query: 121 SHATCRYQVFVDAYGAVFAYDAQEDCLYELASDLAGFFAKGMIRCDPVHESICARLQPNV 180 SHATCRYQVFVDAYGAVFAYDAQEDCLYELASDLAGFFAKGMIRCDPVHESICARLQPNV Sbjct: 121 SHATCRYQVFVDAYGAVFAYDAQEDCLYELASDLAGFFAKGMIRCDPVHESICARLQPNV 180 Query: 181 PLVHPDHRAELCRRSRASARGRYLRSLLAFRELLACEDTAARCAYVEAHREAQLTLIWPE 240 PLVHPDHRAELCRRSRASARGRYLRSLLAFRELLACEDTAARCAYVEAHREAQLTLIWPE Sbjct: 181 PLVHPDHRAELCRRSRASARGRYLRSLLAFRELLACEDTAARCAYVEAHREAQLTLIWPE 240 Query: 241 KHSLVLRTARDLGLSASMLRRFQRSLYTREPVMPLGEIEGAEDKTFFHRVRILCGDTGTV 300 KHSLVLRTARDLGLSASMLRRFQRSLYTREPVMPLGEIEGAEDKTFFHRVRILCGDTGTV Sbjct: 241 KHSLVLRTARDLGLSASMLRRFQRSLYTREPVMPLGEIEGAEDKTFFHRVRILCGDTGTV 300 Query: 301 YAALVGQDKLVRLARDLRGFVRVGLALLIDDFRYESIGPVDRSSLYEANPELRLPFKKRR 360 YAALVGQDKLVRLARDLRGFVRVGLALLIDDFRYESIGPVDRSSLYEANPELRLPFKKRR Sbjct: 301 YAALVGQDKLVRLARDLRGFVRVGLALLIDDFRYESIGPVDRSSLYEANPELRLPFKKRR 360>gi|20026632|ref|NP_612673.1| UL29 [Chimpanzee cytomegalovirus] gi|19881060|gb|AAM00680.1|AF480884_32 UL29 [chimpanzee cytomegalovirus] Length = 352 Score = 563 bits (1452), Expect = e-159 Identities = 277/360 (76%), Positives = 302/360 (82%), Gaps = 11/360 (3%) Query: 2 SGRRKGCSAATASSSSSSPPSRLPPLPGHARRPRRKRCLVPEVFCTRDLADLCVRRDYEG 61 S RRK C A S +P RR RRKR L PE FC RDLADLCVRRDYEG Sbjct: 3 SARRKTCVVAPHGMS----------VPNRVRRARRKRSLAPETFCARDLADLCVRRDYEG 52 Query: 62 LRRYLRRFEGSCVSLGWPSQCIYVVGGEHSPHSLTEIDLEHCQNDFFGEFRALHLIGTVS 121 LRRYL RFEG+CVSLGWPSQC YVVGG HSP+ LTEIDLEHCQNDFFGEFR +HLIG VS Sbjct: 53 LRRYLLRFEGACVSLGWPSQCFYVVGGSHSPYLLTEIDLEHCQNDFFGEFRDMHLIGVVS 112 Query: 122 HATCRYQVFVDAYGAVFAYDAQEDCLYELASDLAGFFAKGMIRCDPVHESICARLQPNVP 181 +A CRY VFVDA+GAVFAYDAQEDCLYELASDL GFFAKGMIRCDPVHESICARLQP V Sbjct: 113 YAACRYPVFVDAHGAVFAYDAQEDCLYELASDLGGFFAKGMIRCDPVHESICARLQPGVS 172 Query: 182 LVHPDHRAELCRRSRASARGRYLRSLLAFRELLAC-EDTAARCAYVEAHREAQLTLIWPE 240 LVHPDH+AELCRRSR SARGRYLRSLL FRELLAC +D AR AYVE+HR+AQL L WPE Sbjct: 173 LVHPDHKAELCRRSRVSARGRYLRSLLCFRELLACGDDPQARSAYVESHRDAQLILTWPE 232 Query: 241 KHSLVLRTARDLGLSASMLRRFQRSLYTREPVMPLGEIEGAEDKTFFHRVRILCGDTGTV 300 +H L++R A+DLGL+AS LRRFQRSLYTREP+ LGEIEG E KTFF+ V+ILCGDTG V Sbjct: 233 RHHLLVRNAQDLGLTASALRRFQRSLYTREPLTALGEIEGPEGKTFFNHVKILCGDTGAV 292 Query: 301 YAALVGQDKLVRLARDLRGFVRVGLALLIDDFRYESIGPVDRSSLYEANPELRLPFKKRR 360 YAALVG DKLV+LARDL+ FVRVGLALLIDDFRYE+IGP+D +SL+E NPEL+LPFKKRR Sbjct: 293 YAALVGHDKLVKLARDLKAFVRVGLALLIDDFRYENIGPIDHTSLHEVNPELKLPFKKRR 352>gi|3789992|gb|AAC67573.1| hypothetical protein UL29 [Rhesus cytomegalovirus] Length = 355 Score = 432 bits (1110), Expect = e-120 Identities = 206/329 (62%), Positives = 251/329 (75%) Query: 32 RRPRRKRCLVPEVFCTRDLADLCVRRDYEGLRRYLRRFEGSCVSLGWPSQCIYVVGGEHS 91 R RRKR PE FC+R L++LC+RRD EGL+RYL RFEGSCVSLGWP+QC +VVGG +S Sbjct: 27 RLVRRKRAAAPETFCSRSLSELCMRRDSEGLKRYLMRFEGSCVSLGWPAQCAFVVGGMYS 86 Query: 92 PHSLTEIDLEHCQNDFFGEFRALHLIGTVSHATCRYQVFVDAYGAVFAYDAQEDCLYELA 151 P+++TEIDLEHCQNDFFGE R L +GTVSH T +Y VF+D GAV YDA+EDCLYE+A Sbjct: 87 PYAITEIDLEHCQNDFFGESRVLQPLGTVSHYTNKYPVFLDPCGAVIVYDAKEDCLYEVA 146 Query: 152 SDLAGFFAKGMIRCDPVHESICARLQPNVPLVHPDHRAELCRRSRASARGRYLRSLLAFR 211 SDL FF +GMIRCDPVHESIC R+QP+V + + E+C RSR S R RYL SLL FR Sbjct: 147 SDLNDFFIRGMIRCDPVHESICRRMQPDVSPLSSAQKVEMCERSRISTRERYLHSLLCFR 206 Query: 212 ELLACEDTAARCAYVEAHREAQLTLIWPEKHSLVLRTARDLGLSASMLRRFQRSLYTREP 271 +LL C D R YVE HR A+L+LIWPE H +++ A+DL +S +RR QR Y REP Sbjct: 207 QLLDCPDNEHRSQYVEEHRNAKLSLIWPENHYVLVANAQDLEMSPIAIRRLQRFSYGREP 266 Query: 272 VMPLGEIEGAEDKTFFHRVRILCGDTGTVYAALVGQDKLVRLARDLRGFVRVGLALLIDD 331 ++ LG IEG +KTFF RV++ CGD+G VY ALVGQ++L R+ARDL+ FVR+GL LIDD Sbjct: 267 ILLLGVIEGEGNKTFFQRVKVFCGDSGIVYVALVGQERLTRIARDLKTFVRIGLCPLIDD 326 Query: 332 FRYESIGPVDRSSLYEANPELRLPFKKRR 360 +RYE+IGPVDR +LYE P LPFKKRR Sbjct: 327 YRYENIGPVDRHTLYELYPGTTLPFKKRR 355>gi|31377927|gb|AAP50577.1| rh50 [Rhesus cytomegalovirus strain 68-1] Length = 336 Score = 431 bits (1107), Expect = e-119 Identities = 205/329 (62%), Positives = 251/329 (75%) Query: 32 RRPRRKRCLVPEVFCTRDLADLCVRRDYEGLRRYLRRFEGSCVSLGWPSQCIYVVGGEHS 91 R RRKR PE FC+R L++LC+RRD EGL+RYL RFEGSCVSLGWP+QC +VVGG +S Sbjct: 8 RLVRRKRAAAPETFCSRSLSELCMRRDSEGLKRYLMRFEGSCVSLGWPAQCAFVVGGMYS 67 Query: 92 PHSLTEIDLEHCQNDFFGEFRALHLIGTVSHATCRYQVFVDAYGAVFAYDAQEDCLYELA 151 P+++TEIDLEHCQNDFFGE R L +GTVSH T +Y VF+D GAV YDA+EDCLYE+A Sbjct: 68 PYAITEIDLEHCQNDFFGESRVLQPLGTVSHYTNKYPVFLDPCGAVIVYDAKEDCLYEVA 127 Query: 152 SDLAGFFAKGMIRCDPVHESICARLQPNVPLVHPDHRAELCRRSRASARGRYLRSLLAFR 211 SDL FF +GMIRCDPVHE+IC R+QP+V + + E+C RSR S R RYL SLL FR Sbjct: 128 SDLNDFFIRGMIRCDPVHETICRRMQPDVSPLSSAQKVEMCERSRISTRERYLHSLLCFR 187 Query: 212 ELLACEDTAARCAYVEAHREAQLTLIWPEKHSLVLRTARDLGLSASMLRRFQRSLYTREP 271 +LL C D R YVE HR A+L+LIWPE H +++ A+DL +S +RR QR Y REP Sbjct: 188 QLLDCPDNEHRSQYVEEHRNAKLSLIWPENHYVLVANAQDLEMSPIAIRRLQRFSYGREP 247 Query: 272 VMPLGEIEGAEDKTFFHRVRILCGDTGTVYAALVGQDKLVRLARDLRGFVRVGLALLIDD 331 ++ LG IEG +KTFF RV++ CGD+G VY ALVGQ++L R+ARDL+ FVR+GL LIDD Sbjct: 248 ILLLGVIEGEGNKTFFQRVKVFCGDSGIVYVALVGQERLTRIARDLKTFVRIGLCPLIDD 307 Query: 332 FRYESIGPVDRSSLYEANPELRLPFKKRR 360 +RYE+IGPVDR +LYE P LPFKKRR Sbjct: 308 YRYENIGPVDRHTLYELYPGTTLPFKKRR 336>gi|14251013|ref|NP_116375.1| T29 [Tupaia herpesvirus] gi|14210707|gb|AAK57070.1| T29 [Tupaia herpesvirus] Length = 598 Score = 179 bits (454), Expect = 6e-44 Identities = 130/371 (35%), Positives = 183/371 (49%), Gaps = 23/371 (6%) Query: 1 MSGRRK-GCSAATASSSSSSPPSRLPPLPGHARRPRRKRCLVPEVFCTRDLADLCVRRDY 59 + GR K G + A + + + G +RRPR + + + L + C R Sbjct: 28 VGGRSKDGAAGARSKDEGVGARPKDEDVDGGSRRPRGREGQLDRLNVCEWL-NSCRRAGA 86 Query: 60 EGLRRYLRRFEGSCVSLGWPSQCIYVVGGEHSPHSLTEIDLEHCQNDFFGEFRALHLIGT 119 L R+ R G + L WPS C + G E + CQ ++F L LIG+ Sbjct: 87 GALARWAREHSGQTLELPWPSGCTIIFGHEEFVRLFGADLVRRCQTEYFDVSCELQLIGS 146 Query: 120 VSHATCRYQVFVDAYGAVFAYDAQEDCLYELASDLAGFFAKGMIRCDPVHESICARLQPN 179 + H Y + +D YG V+A+ A++D L+ELA F G++R +P H L PN Sbjct: 147 IRHERYAYPLLLDGYGRVYAHYARDDSLFELAESFTEFLGLGLVRFEPAH------LSPN 200 Query: 180 VPLVHPDHRAE---LCRRS-RASARGRYLRSLLAFRELLACEDTAARCAYVEAHREAQLT 235 L + E +C +AS R RYLRS+ FR LLA ED AA A+V +R L+ Sbjct: 201 -DLAKAERHTEALAVCNLHWQASERVRYLRSMRDFRSLLALEDPAAIAAHVRQYRGLSLS 259 Query: 236 LIWPEKHSLVLRTARDLGLSASMLRRFQRSLYTREPVMPLGEIEGAEDKT---FFHRVRI 292 L WP + L+L A LG+S L+R Q +L EP+ LG + + T F + I Sbjct: 260 LTWPLESFLILSDAATLGVSELTLKRLQSTLPVVEPLCILGVVAQSSAITSLSSFQGLII 319 Query: 293 LCGDTGTVYAALVGQDKLVRLARDLRGFVRVGLALLIDDFRYESIGPVDRSSLYE---AN 349 L D G VYA G +++ R+A L FVRVGL LI D+ YE IG S+L+E A+ Sbjct: 320 LLSDGGVVYAYSPGSERVQRVAVSLLAFVRVGLGRLIGDYHYERIG----SALWEPGVAS 375 Query: 350 PELRLPFKKRR 360 E +LP KKRR Sbjct: 376 SEEQLPLKKRR 386>gi|9628731|ref|NP_043762.1| Hypothetical protein [Human herpesvirus 7] gi|1722834|sp|P52523|VU8_HSV7J U8 protein gi|7519688|pir||T41910 hypothetical protein U8 - human herpesvirus 7 (strain JI) gi|1139610|gb|AAC54670.1| HCMV US22 gene family gi|2746240|gb|AAC40724.1| U8 [Human herpesvirus 7] Length = 362 Score = 84.0 bits (206), Expect = 4e-15 Identities = 89/324 (27%), Positives = 137/324 (41%), Gaps = 42/324 (12%) Query: 48 RDLADLCVRRDYEGLRRYLRRFEGSCVSLGWP-------SQCIYVVGGEHSPHSLTEIDL 100 R+L +LC D+ G+R R C+SL WP +Q + V G +S L E+ Sbjct: 26 RELKNLCRFTDFPGIRLLTERHRNECLSLIWPKNLWLRLAQPVDVAG--YSEQQLAEL-- 81 Query: 101 EHCQNDFFGEFRA-LHLIGTVSHATCRYQVFVDAYGAVFAYDAQEDCLYELASDLAGFFA 159 ND + F+ L LIG + +FV +F +D ++D LY +A D F Sbjct: 82 ----NDHYQGFKENLCLIGAIQIGRKDVPIFVGKSSRIFCHDLEDDVLYYIAEDFDKFVR 137 Query: 160 KGMIRCDPV--HESICARLQPNVP-------------LVHPDHRAELCRRSRASA----- 199 G++ + + E + R + P L P + R +R +A Sbjct: 138 FGILGTNVITCSEPVYTRFYYDGPKFEKLETLKDLGLLQEPLNLNSSLRFNRKTALALKA 197 Query: 200 -RGRYLRSLLAFRELLACEDTAARCAYVEAHREAQLTLIWPEKHSLVLRTARDLGLSASM 258 R Y+ L EL C+ A +V + +L L P +L+L+ +++ S Sbjct: 198 LRRNYISMLSELDELARCKTLAEIEHFVSINTGLKLRLETPIFTALILQDRKNIHCGTSD 257 Query: 259 LRRFQRSLYTREPVMPLGEIE-GAEDKTFFHRVRILC-GDTGTVYAALVGQDKLVRLARD 316 +RF+ E V+ LG + AED + ILC G+TG +Y L R+A Sbjct: 258 QKRFEEQEALFEKVVVLGFLNISAED---YGLRPILCIGETGAIYYYDWIDKVLTRIADC 314 Query: 317 LRGFVRVGLALLIDDFRYESIGPV 340 L F R+G A DF Y+ IG V Sbjct: 315 LLTFARIGFARYCGDFGYDKIGKV 338>gi|9628308|ref|NP_042899.1| Hypothetical protein [Human herpesvirus 6] gi|548917|sp|Q01346|VU8_HSV6U U8 protein gi|281194|pir||JQ1652 SFL1 protein - human herpesvirus 6 gi|221462|dbj|BAA00980.1| ORF [Human herpesvirus 6] gi|853987|emb|CAA58435.1| U8 [Human herpesvirus 6] Length = 356 Score = 66.6 bits (161), Expect = 6e-10 Identities = 76/322 (23%), Positives = 123/322 (37%), Gaps = 23/322 (7%) Query: 41 VPEVFCTRDLADLCVRRDYEGLRRYLRRFEGSCVSLGWPSQCIYVVGGEHSPHSLTEIDL 100 +P +L LC D + ++ R++ C+S+ WP C TE Sbjct: 12 IPNENALAELCRLCESADLSQIENFVGRYKNWCLSIIWPRNCWLRFTPRKDVAGYTEKMF 71 Query: 101 EHCQNDFFGEFRALHLIGTVSHATCRYQVFVDAYGAVFAYDAQEDCLYELASDLAGFFAK 160 E + + G L L+GT+ + + +F +D + D L+ + + F Sbjct: 72 EDMDDHYQGFVEKLCLLGTIQIPYRDVPILIGRSKRIFLHDLETDTLHFVCDNFEQFVRY 131 Query: 161 G-----MIRC-DPVH----------ESICARLQPNVPLVHP---DHRAELCRR---SRAS 198 G +I C +PV+ ES+ L N L P + +L R+ + Sbjct: 132 GVLGTNIITCAEPVYRHGLYEGPRFESL-ENLMNNDVLRSPYTLNVHVKLNRKGVLGIKA 190 Query: 199 ARGRYLRSLLAFRELLACEDTAARCAYVEAHREAQLTLIWPEKHSLVLRTARDLGLSASM 258 R Y+ L F EL C +V + L L P SL L T + Sbjct: 191 MRKHYIAMLREFDELARCASLDDVGRFVSLNVGRDLRLDMPVFKSLTLGTRDSVWTGTCR 250 Query: 259 LRRFQRSLYTREPVMPLGEIEGAEDKTFFHRVRILCGDTGTVYAALVGQDKLVRLARDLR 318 L + E V+ LG + + ++ R + G +G +Y + LV+L L Sbjct: 251 LANLKEQEDLVEKVVVLGYLNDHDYESKCTRPILCIGKSGKIYYYDWIDNVLVKLGDCLL 310 Query: 319 GFVRVGLALLIDDFRYESIGPV 340 F+RVG A L D+ YE IG + Sbjct: 311 TFLRVGFARLFADYGYEKIGKI 332>gi|11280654|pir||T43967 hypothetical protein U8 [imported] - human herpesvirus 6 (strain HST) gi|4995995|dbj|BAA78228.1| 83% identical to U8 gene of strain U1102 of HHV-6~US22 gene family [Human herpesvirus 6] Length = 411 Score = 61.2 bits (147), Expect = 3e-08 Identities = 73/322 (22%), Positives = 119/322 (36%), Gaps = 23/322 (7%) Query: 41 VPEVFCTRDLADLCVRRDYEGLRRYLRRFEGSCVSLGWPSQCIYVVGGEHSPHSLTEIDL 100 +P +L C D + ++ ++ C+S+ WP C TE Sbjct: 67 IPNENALAELCRFCESADLSRIENFVGTYKNWCLSIIWPRNCWLRFTLRKDVAGYTEKMF 126 Query: 101 EHCQNDFFGEFRALHLIGTVSHATCRYQVFVDAYGAVFAYDAQEDCLYELASDLAGFFAK 160 E + + G L L+GT+ + + +F +D + D L+ + + F Sbjct: 127 EDMNDHYQGFVEKLCLLGTIQIPYRDVPILIGRSKRIFLHDLETDTLHFVCDNFEQFVRY 186 Query: 161 GM-----IRC-DPVH----------ESICARLQPNVPLVHPDHRAELCRRSRASARG--- 201 G+ I C +PV+ ES+ L+ N L P + +R G Sbjct: 187 GVLGTNIITCAEPVYRHGLYDGPRFESL-ENLRNNDVLRSPCTLNVHLKLNRKGVLGIKA 245 Query: 202 ---RYLRSLLAFRELLACEDTAARCAYVEAHREAQLTLIWPEKHSLVLRTARDLGLSASM 258 Y+ L F EL C +V + L L P SL L T + + Sbjct: 246 MRKHYIAMLREFDELARCASLDDVERFVSLNVGRDLRLDMPVFKSLTLGTRDSVWIGTCR 305 Query: 259 LRRFQRSLYTREPVMPLGEIEGAEDKTFFHRVRILCGDTGTVYAALVGQDKLVRLARDLR 318 L + E V+ LG + + ++ R + G +G +Y + LV+L L Sbjct: 306 LANLEEQEDLVEKVVVLGYLNDHDYESKCTRPILCIGKSGKIYYYDWIDNVLVKLGDCLL 365 Query: 319 GFVRVGLALLIDDFRYESIGPV 340 F+RVG A L D YE IG + Sbjct: 366 TFLRVGFARLFADCGYEKIGKI 387>gi|9633081|ref|NP_050189.1| Hypothetical protein [Human herpesvirus 6B] gi|11280655|pir||T44155 hypothetical protein U8 [imported] - human herpesvirus 6 (strain Z29) gi|5733522|gb|AAD49625.1|AF157706_13 U8 [Human herpesvirus 6B] Length = 411 Score = 61.2 bits (147), Expect = 3e-08 Identities = 74/322 (22%), Positives = 122/322 (36%), Gaps = 23/322 (7%) Query: 41 VPEVFCTRDLADLCVRRDYEGLRRYLRRFEGSCVSLGWPSQCIYVVGGEHSPHSLTEIDL 100 +P +L C D + ++ ++ C+S+ WP C TE Sbjct: 67 IPNENALAELCRFCESADLSRIENFVGTYKNWCLSIIWPRNCWLRFTLRKDVAGYTEKMF 126 Query: 101 EHCQNDFFGEFRALHLIGTVSHATCRYQVFVDAYGAVFAYDAQEDCLYELASDLAGFFAK 160 E + + G L L+GT+ + + +F +D + D L+ + + F Sbjct: 127 EDMNDHYQGFVEKLCLLGTIQIPYRDVPILIGRSKRIFLHDLETDTLHFVCDNFEQFVRY 186 Query: 161 GM-----IRC-DPVH----------ESICARLQPNVPLVHP---DHRAELCRRSRA---S 198 G+ I C +PV+ ES+ L+ N L P + +L R+ + Sbjct: 187 GVLGTNIITCAEPVYRHGLYDGPRFESL-ENLRNNDVLRSPCTLNIHLKLNRKGVLGIKA 245 Query: 199 ARGRYLRSLLAFRELLACEDTAARCAYVEAHREAQLTLIWPEKHSLVLRTARDLGLSASM 258 R Y+ L F EL C +V + L L P SL L T + + Sbjct: 246 MRKHYIAMLREFDELARCASLDDVERFVSLNVGRDLRLDMPVFKSLTLGTRDSVWIGTCR 305 Query: 259 LRRFQRSLYTREPVMPLGEIEGAEDKTFFHRVRILCGDTGTVYAALVGQDKLVRLARDLR 318 L + E V+ LG + + ++ R + G +G +Y + LV+L L Sbjct: 306 LANLEEQEDLVEKVVVLGYLNDHDYESKCTRPILCIGKSGKIYYYDWIDNVLVKLGDCLL 365 Query: 319 GFVRVGLALLIDDFRYESIGPV 340 F+RVG A L D YE IG + Sbjct: 366 TFLRVGFARLFADCGYEKIGKI 387>gi|9845327|ref|NP_064141.1| pR36 [Rat cytomegalovirus] gi|9800260|gb|AAF99134.1|AF232689_27 pR36 [rat cytomegalovirus Maastricht] Length = 478 Score = 47.4 bits (111), Expect = 4e-04 Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 6/118 (5%) Query: 58 DYEGLRRYLRRFEGSCVSLGWPSQCIYVVGGEHSPHSLTEIDLEHCQNDFF----GEFRA 113 D + +R+++ GS + L WP ++ + + C + EF Sbjct: 22 DRDRIRKHVSDKCGSLLPLSWPDGVSVMLMDVRTISRFARVADAVCLGGRYVCCCEEFAP 81 Query: 114 L-HLIGTVSHATCRYQVFVDAYGAVFAYDAQEDCLYELASDLAGFFAKGMIRCDPVHE 170 + L G+V R+ V + G V+ YD QEDC+Y+L L FF G+ R D V++ Sbjct: 82 IGRLFGSVIEKN-RFVVLYGSTGGVYCYDLQEDCVYQLGDSLQSFFCDGLRRMDAVYD 138Database: nr Posted date: Aug 27, 2003 10:37 AM Number of letters in database: 485,782,529 Number of sequences in database: 1,508,275 Lambda K H 0.326 0.140 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 339,365,377 Number of Sequences: 1508275 Number of extensions: 13918864 Number of successful extensions: 47049 Number of sequences better than 1.0e-03: 10 Number of HSP's better than 0.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 47025 Number of HSP's gapped (non-prelim): 13 length of query: 360 length of database: 485,782,529 effective HSP length: 125 effective length of query: 235 effective length of database: 297,248,154 effective search space: 69853316190 effective search space used: 69853316190 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 108 (46.2 bits)