BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= TDE0240
(512 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|42525758|ref|NP_970856.1| glycine reductase complex prot... 989 0.0
gi|54303216|ref|YP_133209.1| Hypothetical glycine reductase... 599 e-169
gi|90410190|ref|ZP_01218207.1| Hypothetical glycine reducta... 598 e-169
gi|2507040|sp|P54935|GRDC_EUBAC Glycine/sarcosine/betaine r... 587 e-166
gi|148379246|ref|YP_001253787.1| glycine/sarcosine/betaine ... 578 e-163
gi|95930166|ref|ZP_01312905.1| 3-oxoacyl-(acyl-carrier-prot... 574 e-162
gi|106895396|ref|ZP_01362492.1| 3-oxoacyl-(acyl-carrier-pro... 573 e-162
gi|150391322|ref|YP_001321371.1| Betaine reductase [Alkalip... 573 e-161
gi|153939339|ref|YP_001390612.1| glycine reductase complex ... 573 e-161
gi|11065690|emb|CAC14302.1| large subunit of protein C [Clo... 565 e-159
gi|126699967|ref|YP_001088864.1| glycine/sarcosine/betaine ... 564 e-159
gi|20808287|ref|NP_623458.1| 3-oxoacyl-(acyl-carrier-protei... 561 e-158
gi|145952761|ref|ZP_01801769.1| hypothetical protein CdifQ_... 559 e-157
gi|78044225|ref|YP_361191.1| glycine reductase complex, pro... 558 e-157
gi|153853778|ref|ZP_01995134.1| hypothetical protein DORLON... 552 e-155
gi|51894003|ref|YP_076694.1| glycine reductase complex C [S... 536 e-150
gi|85860133|ref|YP_462335.1| glycine reductase complex prot... 442 e-122
>gi|42525758|ref|NP_970856.1| glycine reductase complex protein GrdC [Treponema denticola ATCC
35405]
gi|41815769|gb|AAS10737.1| glycine reductase complex protein GrdC [Treponema denticola ATCC
35405]
Length = 512
Score = 989 bits (2558), Expect = 0.0, Method: Composition-based stats.
Identities = 512/512 (100%), Positives = 512/512 (100%)
Query: 1 MAKVAIKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQ 60
MAKVAIKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQ
Sbjct: 1 MAKVAIKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQ 60
Query: 61 VYIGNMAPEDLEKLPEPWYKDAKKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEFT 120
VYIGNMAPEDLEKLPEPWYKDAKKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEFT
Sbjct: 61 VYIGNMAPEDLEKLPEPWYKDAKKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEFT 120
Query: 121 AQAAKLIENHPMMKTQDIKLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTDEN 180
AQAAKLIENHPMMKTQDIKLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTDEN
Sbjct: 121 AQAAKLIENHPMMKTQDIKLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTDEN 180
Query: 181 LSAHTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAKAV 240
LSAHTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAKAV
Sbjct: 181 LSAHTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAKAV 240
Query: 241 GEKSGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDHVK 300
GEKSGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDHVK
Sbjct: 241 GEKSGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDHVK 300
Query: 301 KDLPLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAAGL 360
KDLPLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAAGL
Sbjct: 301 KDLPLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAAGL 360
Query: 361 KMTDIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGVVG 420
KMTDIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGVVG
Sbjct: 361 KMTDIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGVVG 420
Query: 421 FAPTQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEANDGK 480
FAPTQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEANDGK
Sbjct: 421 FAPTQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEANDGK 480
Query: 481 GSASAGQDTAGIKKIVAEAMRNVAENILKSQN 512
GSASAGQDTAGIKKIVAEAMRNVAENILKSQN
Sbjct: 481 GSASAGQDTAGIKKIVAEAMRNVAENILKSQN 512
>gi|54303216|ref|YP_133209.1| Hypothetical glycine reductase protein C [Photobacterium profundum
SS9]
gi|46916644|emb|CAG23409.1| Hypothetical glycine reductase protein C [Photobacterium profundum
SS9]
Length = 511
Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats.
Identities = 299/514 (58%), Positives = 385/514 (74%), Gaps = 9/514 (1%)
Query: 1 MAKVAIKGASYILVHAPDLLFHNGSTQTGTRLAN-PEDEYLKAIPSHLRSFEEAVNYPPN 59
M IKG SYIL H PD+L +NGS Q R N P+D YL I +HLR F + V+YP N
Sbjct: 1 MGYAVIKGVSYILAHTPDILINNGSAQVAARAKNDPQDNYLTNIGTHLRPFSDVVSYPAN 60
Query: 60 QVYIGNMAPEDLEKLPEPWYKDAKKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEF 119
Q YIGN+ P+ L LP+PW+ + +GK+GEI +Q FY ++ H DVF LV F+ EF
Sbjct: 61 QCYIGNITPQQLSDLPQPWFDIKESTAAEGKYGEIYSQEHFYAMLSHVDVFNLVCFTAEF 120
Query: 120 TAQAAKLIENHPMMKTQDIKLGEGHDIA---EIKKMVDAHTAEGLYEQGKLIGCVKQAHD 176
+ + +H + D L GH + E+ + ++H AE L G++IGCVK AHD
Sbjct: 121 IEKYHSQVCHHALYG--DTDLLAGHQLITRDEVLALHESHQAEVLMLNGEIIGCVKAAHD 178
Query: 177 TDENLSAHTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNI 236
DENLSAH MLENL TKASG++SA ++ K +GID+ D++YIIECSEEA GDINQRGGGN
Sbjct: 179 EDENLSAHIMLENLCTKASGVMSAMNL-KRQGIDVADIDYIIECSEEACGDINQRGGGNF 237
Query: 237 AKAVGEKSGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGK 296
AKA+GE GCV ATGSDVRGFCAAP HA+ AALV AGIFKNVMVV+GG+V KLGMNG+
Sbjct: 238 AKAIGESVGCVMATGSDVRGFCAAPAHAMTLAAALVKAGIFKNVMVVAGGAVAKLGMNGR 297
Query: 297 DHVKKDLPLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLN 356
DHVK ++P+ ED + GFA ++S +DGV+P+INT++VG+H I +GS+PQAVM+ L+ PL
Sbjct: 298 DHVKNNMPVLEDCLAGFACVVSENDGVSPMINTDIVGRHQIGTGSSPQAVMTALIAKPLK 357
Query: 357 AAGLKMTDIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKH 416
AG+ MTDI+KYS E+QN EIT PAGAGNVPE+N KMIAAL+V +GQLE+TQ+ +FVK+H
Sbjct: 358 DAGMAMTDIDKYSVEMQNPEITKPAGAGNVPESNYKMIAALAVKEGQLERTQLLDFVKEH 417
Query: 417 GVVGFAPTQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEA 476
G+ GFAPTQGHIPSGVPF+G R +M+G++ N M++GKGSLFLGR+TNLFDGLSF+++
Sbjct: 418 GMTGFAPTQGHIPSGVPFLGFGRDMIMSGEINNFMMVGKGSLFLGRMTNLFDGLSFVVQK 477
Query: 477 NDGKGSASAGQDTAGIKKIVAEAMRNVAENILKS 510
N GK +A D A +K+IVA+AMR+VAEN+L +
Sbjct: 478 NTGKQAAQF--DEAQVKQIVAQAMRDVAENLLNA 509
>gi|90410190|ref|ZP_01218207.1| Hypothetical glycine reductase protein C [Photobacterium profundum
3TCK]
gi|90329543|gb|EAS45800.1| Hypothetical glycine reductase protein C [Photobacterium profundum
3TCK]
Length = 511
Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats.
Identities = 298/514 (57%), Positives = 384/514 (74%), Gaps = 9/514 (1%)
Query: 1 MAKVAIKGASYILVHAPDLLFHNGSTQTGTRLAN-PEDEYLKAIPSHLRSFEEAVNYPPN 59
M IKG SY+L H PD+L HNGS Q R N P+D YL + +HLR F + V+YP N
Sbjct: 1 MGYAVIKGVSYVLAHTPDILIHNGSAQVAARAKNDPQDNYLANLGTHLRPFSDVVSYPAN 60
Query: 60 QVYIGNMAPEDLEKLPEPWYKDAKKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEF 119
Q YIGN+ P+ L LP+PW+ + +GK+GEI +Q FY ++ H DVF LV F+ EF
Sbjct: 61 QCYIGNITPQQLSDLPQPWFNIKESTSAEGKYGEINSQEHFYAMLNHVDVFNLVCFTAEF 120
Query: 120 TAQAAKLIENHPMMKTQDIKLGEGHDIA---EIKKMVDAHTAEGLYEQGKLIGCVKQAHD 176
+ I +H + D L GH + E+ + ++H AE L G++IGCVK AHD
Sbjct: 121 IEKYHSQICHHALYG--DTDLLAGHQLITRDEVLALHESHQAEVLMLNGEIIGCVKAAHD 178
Query: 177 TDENLSAHTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNI 236
DENLSAH MLENL TKASG++SA ++ K +GID+ +++YIIECSEEA GDINQRGGGN
Sbjct: 179 EDENLSAHIMLENLCTKASGVMSAMNL-KRQGIDVAEIDYIIECSEEACGDINQRGGGNF 237
Query: 237 AKAVGEKSGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGK 296
AKA+GE GCV ATGSDVRGFCAAP HA+ AALV AGIFKNVMVV+GG+V KLGMNG+
Sbjct: 238 AKAIGESVGCVTATGSDVRGFCAAPAHAMTLAAALVKAGIFKNVMVVAGGAVAKLGMNGR 297
Query: 297 DHVKKDLPLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLN 356
DHVK ++P+ ED + GFA ++S +DGV+P+INT++VG+H I +GS+PQAVM+ L+ PL
Sbjct: 298 DHVKNNMPVLEDCLAGFACVVSENDGVSPMINTDIVGRHQIGTGSSPQAVMTALIAKPLK 357
Query: 357 AAGLKMTDIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKH 416
AG+ MTDI+KYS E+QN EIT PAGAGNVPE+N KMIAAL+V +GQLE+TQ+ +FVK+H
Sbjct: 358 DAGMAMTDIDKYSVEMQNPEITKPAGAGNVPESNYKMIAALAVKEGQLERTQLLDFVKEH 417
Query: 417 GVVGFAPTQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEA 476
G+ GFAPTQGHIPSGVPF+G R +M G++ N M++GKGSLFLGR+TNLFDGLSF+++
Sbjct: 418 GMTGFAPTQGHIPSGVPFLGFGRDMIMNGEINNFMMVGKGSLFLGRMTNLFDGLSFVVQK 477
Query: 477 NDGKGSASAGQDTAGIKKIVAEAMRNVAENILKS 510
N GK +A D A +K+IVA+AMR+VAEN+L +
Sbjct: 478 NTGKQAAQF--DEAQVKQIVAQAMRDVAENLLNA 509
>gi|2507040|sp|P54935|GRDC_EUBAC Glycine/sarcosine/betaine reductase complex component C subunit
beta (Protein PC beta)
gi|1353198|gb|AAB93306.1| glycine reductase [Eubacterium acidaminophilum]
Length = 513
Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats.
Identities = 288/506 (56%), Positives = 383/506 (75%), Gaps = 3/506 (0%)
Query: 6 IKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQVYIGN 65
+KGA Y+LVH PD++ HNG+TQT ++ NPE EYLK +P HLRSFE+ V Y PNQ YIG+
Sbjct: 6 LKGAGYVLVHTPDMIMHNGTTQTTEKIVNPESEYLKKLPEHLRSFEDVVAYAPNQTYIGS 65
Query: 66 MAPEDLEKLPEPWYKDAKK---AERKGKFGEIMTQAEFYILMKHADVFELVYFSKEFTAQ 122
M PE L ++ PW+ + KK A+R GK GEIM Q EF LM +DVF+LV F KEF
Sbjct: 66 MTPEALGEIAMPWWTEDKKVAGADRYGKLGEIMPQDEFLALMSASDVFDLVLFEKEFIEG 125
Query: 123 AAKLIENHPMMKTQDIKLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTDENLS 182
A + HP++ + G ++AEI+K + AEGLY GKL+GCVK+AHD D NL+
Sbjct: 126 AKAKLAAHPVVGNLAESVNAGVELAEIEKQLSEFHAEGLYNNGKLVGCVKRAHDVDVNLN 185
Query: 183 AHTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAKAVGE 242
+HTMLENLA KASG+L+ ++ ++ +V+YIIECSEEA GD+NQRGGGN AKA+ E
Sbjct: 186 SHTMLENLAVKASGVLALANLIAKNNVNPAEVDYIIECSEEACGDMNQRGGGNFAKALAE 245
Query: 243 KSGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDHVKKD 302
+GCVNATGSD+RGFCA P HA+I AALV +G++KNV++ +GG+ KLGMNGKDHVKK+
Sbjct: 246 MTGCVNATGSDMRGFCAGPTHALIAAAALVKSGVYKNVIIAAGGATAKLGMNGKDHVKKE 305
Query: 303 LPLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAAGLKM 362
+P+ ED +GGFAV++S +DGVNP++ T++VG+H +++GSAPQAV+ LV PL A GLK+
Sbjct: 306 MPILEDCLGGFAVLVSENDGVNPILRTDLVGRHTVATGSAPQAVIGSLVLSPLKAGGLKI 365
Query: 363 TDIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGVVGFA 422
TD++KYS E+QN +IT PAGAG+VPEAN KMIAAL+VM ++E+ IA FV+KHG+VG+A
Sbjct: 366 TDVDKYSVEMQNPDITKPAGAGDVPEANYKMIAALAVMGKEIERADIAAFVEKHGMVGWA 425
Query: 423 PTQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEANDGKGS 482
PTQGHIPSGVP+IG A D+ G + TMI+GKGSLFLGR+TNLFDG+S + E N GK
Sbjct: 426 PTQGHIPSGVPYIGFAISDLTEGSVNRTMIVGKGSLFLGRMTNLFDGVSIVAERNTGKVE 485
Query: 483 ASAGQDTAGIKKIVAEAMRNVAENIL 508
+ + T I+K++AE+M++ A ++L
Sbjct: 486 SGSSVSTEEIRKMIAESMKDFAAHLL 511
>gi|148379246|ref|YP_001253787.1| glycine/sarcosine/betaine reductase complex component C beta
subunit [Clostridium botulinum A str. ATCC 3502]
gi|153933177|ref|YP_001383618.1| glycine reductase complex component C, beta subunit [Clostridium
botulinum A str. ATCC 19397]
gi|153937685|ref|YP_001387167.1| glycine reductase complex component C, beta subunit [Clostridium
botulinum A str. Hall]
gi|148288730|emb|CAL82813.1| glycine/sarcosine/betaine reductase complex component C beta
subunit [Clostridium botulinum A str. ATCC 3502]
gi|152929221|gb|ABS34721.1| glycine reductase complex component C, beta subunit [Clostridium
botulinum A str. ATCC 19397]
gi|152933599|gb|ABS39098.1| glycine reductase complex component C, beta subunit [Clostridium
botulinum A str. Hall]
Length = 512
Score = 578 bits (1489), Expect = e-163, Method: Composition-based stats.
Identities = 277/506 (54%), Positives = 375/506 (74%), Gaps = 2/506 (0%)
Query: 6 IKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQVYIGN 65
IKGASYILVH PD++ HNG+TQT ++ NP+ EYLK +P HLR+FE+ +NY PNQ YIGN
Sbjct: 6 IKGASYILVHTPDMVLHNGTTQTTEKVVNPDSEYLKELPKHLRNFEDVLNYAPNQTYIGN 65
Query: 66 MAPEDLEKLPEPWY-KDAKKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEFTAQAA 124
M P+ L ++ PW+ K +++ R GK GE+M Q EF LM+ DVF+LV K F
Sbjct: 66 MTPDQLGEIEMPWWDKKIEESSRFGKLGEMMPQDEFIGLMEICDVFDLVVLEKSFVGDVK 125
Query: 125 KLIENHPMMKTQDI-KLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTDENLSA 183
+E HP++ I K+ EG I EIKK+VD AEGLY +G L+GCVK+AHD D NLSA
Sbjct: 126 NKLEKHPLIDENMISKIKEGVAIEEIKKVVDEEGAEGLYNEGTLVGCVKKAHDVDVNLSA 185
Query: 184 HTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAKAVGEK 243
HTMLENL KASG+LS ++ ID ++Y+IECSEEA GD+NQRGGGN AK++ E
Sbjct: 186 HTMLENLVVKASGVLSLLNLIAKNNIDPNSIDYVIECSEEACGDMNQRGGGNFAKSLAEV 245
Query: 244 SGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDHVKKDL 303
+G NATG+D+RGFCA P H++I +ALV +G++ NV++ GG+ KLGMNGKDHVKK++
Sbjct: 246 AGFTNATGADMRGFCAGPSHSLIAASALVQSGVYDNVVIAGGGASAKLGMNGKDHVKKEM 305
Query: 304 PLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAAGLKMT 363
P+ ED +GGFAV++S +DG+NP++ T++VGKH + +GS+PQAV+S LV DPL+ AGLK+T
Sbjct: 306 PILEDCLGGFAVLVSKNDGINPILRTDLVGKHTVGTGSSPQAVISSLVTDPLDKAGLKIT 365
Query: 364 DIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGVVGFAP 423
D++KYS E+QN +IT PAGAG+VP+AN KMI AL V K +EK ++ +F++ HG+ G+AP
Sbjct: 366 DVDKYSVEMQNPDITKPAGAGDVPQANYKMIGALGVKKKHIEKKELKDFIQNHGMSGWAP 425
Query: 424 TQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEANDGKGSA 483
TQGHIPSGVP+IG AR D+ G L M++GKGSLFLGR+TNLFDG+S +IE N G
Sbjct: 426 TQGHIPSGVPYIGFARNDLTEGNLNRVMVVGKGSLFLGRMTNLFDGVSIIIERNTGYKEE 485
Query: 484 SAGQDTAGIKKIVAEAMRNVAENILK 509
G ++KI+AE+++ +A +++
Sbjct: 486 EKGISEDKVRKIIAESIKKLASQLVE 511
>gi|95930166|ref|ZP_01312905.1| 3-oxoacyl-(acyl-carrier-protein) synthase III [Desulfuromonas
acetoxidans DSM 684]
gi|95133860|gb|EAT15520.1| 3-oxoacyl-(acyl-carrier-protein) synthase III [Desulfuromonas
acetoxidans DSM 684]
Length = 512
Score = 574 bits (1479), Expect = e-162, Method: Composition-based stats.
Identities = 282/512 (55%), Positives = 382/512 (74%), Gaps = 6/512 (1%)
Query: 1 MAKVAIKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQ 60
M +K ASY+LVH PD++ HNG+TQT + NP+ EYLK I + +RS+EE V+Y PNQ
Sbjct: 1 MDNAVLKHASYVLVHTPDMILHNGTTQTSEKQINPDSEYLKNISASIRSYEEVVSYAPNQ 60
Query: 61 VYIGNMAPEDLEKLPEPWYKDA-KKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEF 119
YIGN+ P+DL + PWY + A R GK+GEI+ Q EF L+K AD F+LV SK+F
Sbjct: 61 AYIGNITPDDLRAIETPWYANGIANATRAGKYGEILPQDEFIALLKIADGFDLVQLSKDF 120
Query: 120 TAQAAKLIENHPMMKTQDIKLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTDE 179
A + I HP++ KLG G ++ I+ + A AE +Y QG+L+GCVK+AHD D
Sbjct: 121 VAAVTEKISQHPLLTGDVEKLGAGVELKNIEHAITAEHAEAIYHQGQLVGCVKKAHDIDL 180
Query: 180 NLSAHTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAKA 239
NLSAH + ENL KASG L+ H+ + GI+ +EY+IECSEEA GD+NQRGGGN AK+
Sbjct: 181 NLSAHVIYENLVVKASGALALSHLMENSGIEKDTIEYVIECSEEACGDMNQRGGGNFAKS 240
Query: 240 VGEKSGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDHV 299
+ E G VNATGSD RGFCAAP+HA++ AALV +GI+ NV VV+GG+ KLGMNGKDHV
Sbjct: 241 IAEMCGAVNATGSDTRGFCAAPLHALVEAAALVKSGIYSNVAVVAGGATAKLGMNGKDHV 300
Query: 300 KKDLPLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAAG 359
KK +P+ ED++GGFAV++SA+DGV+PV+ T++VG+H + +GS+PQAV++ LV PL+ AG
Sbjct: 301 KKGIPVLEDVLGGFAVLISANDGVSPVLRTDLVGRHTVGTGSSPQAVITALVTAPLDKAG 360
Query: 360 LKMTDIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGVV 419
LK+TDI+KYS E+QN ++T PAGAG+VPEAN KMIAAL+V + +LE+T++ FV+K+G+
Sbjct: 361 LKITDIDKYSVEMQNPDVTKPAGAGDVPEANYKMIAALAVKRQELERTELLGFVQKNGMP 420
Query: 420 GFAPTQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEANDG 479
G+APTQGHIPSGVP++G AR D+ G+L TMIIGKGSLFLGR+TNLFDG+S ++E N G
Sbjct: 421 GWAPTQGHIPSGVPYLGFAREDLTTGELNRTMIIGKGSLFLGRMTNLFDGVSIIVERNSG 480
Query: 480 KGSA---SAGQDTAGIKKIVAEAMRNVAENIL 508
+ ++ + QD IK ++AE M++ A ++L
Sbjct: 481 QVASDQQAVSQDE--IKNLIAETMKDFASHLL 510
>gi|106895396|ref|ZP_01362492.1| 3-oxoacyl-(acyl-carrier-protein) synthase III [Clostridium sp.
OhILAs]
gi|106773316|gb|EAT29904.1| 3-oxoacyl-(acyl-carrier-protein) synthase III [Clostridium sp.
OhILAs]
Length = 513
Score = 573 bits (1477), Expect = e-162, Method: Composition-based stats.
Identities = 278/511 (54%), Positives = 379/511 (74%), Gaps = 3/511 (0%)
Query: 1 MAKVAIKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQ 60
M+ K + Y+LVH PD++ H+G+TQT +L NP +YLK +P HLRSFEE V+YPPNQ
Sbjct: 1 MSYAVAKASGYVLVHTPDMILHSGTTQTIEKLTNPNSDYLKKLPEHLRSFEEVVSYPPNQ 60
Query: 61 VYIGNMAPEDLEKLPEPWY-KDAKKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEF 119
VYIG+M PE+L + PWY K + A+R GK GEIM Q EF LMK +DVF+LV K F
Sbjct: 61 VYIGSMKPEELNQYEAPWYDKKVEGAKRDGKLGEIMPQDEFIALMKISDVFDLVKLEKAF 120
Query: 120 TAQAAKLIENHPMMKTQDI-KLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTD 178
T +E HP++ + + KL +G D++EI+K ++ AE +Y +GK+IGCVK+AH+ D
Sbjct: 121 TEMVKVKMEQHPLISAEMVAKLKDGEDLSEIEKFINEQHAEPIYNEGKVIGCVKRAHEVD 180
Query: 179 ENLSAHTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAK 238
NL+AH + ENL KASG L+ H+ ID KD++Y++ECSEEA GD+NQRGGGN AK
Sbjct: 181 VNLNAHVIFENLVVKASGFLAFLHLLDKNKIDPKDIDYVVECSEEACGDMNQRGGGNFAK 240
Query: 239 AVGEKSGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDH 298
A+ E +G +NATGSD RGFCAAP HA+I AALV +G++ NV++V+GG+ KLGMNGKDH
Sbjct: 241 AIAELAGAINATGSDTRGFCAAPTHALIEAAALVQSGVYDNVVIVAGGATAKLGMNGKDH 300
Query: 299 VKKDLPLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAA 358
VKK+LP+ ED++GGFAV++S +DGVNP++ T++VG+H + +GS+PQAV++ L+ PL+
Sbjct: 301 VKKELPILEDVLGGFAVLVSKNDGVNPILRTDLVGRHTVGTGSSPQAVITSLITAPLDKG 360
Query: 359 GLKMTDIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGV 418
GLK+TD++KYS E+QN +IT PAGAG+VPEAN KMIAAL V + +LE++ +A F KHG+
Sbjct: 361 GLKITDVDKYSVEMQNPDITKPAGAGDVPEANYKMIAALGVKRNELERSDVATFGHKHGM 420
Query: 419 VGFAPTQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEAND 478
G+APTQGHIPSGVP+IGHA +++ MI+GKGSLFLGR+TN FDG+S ++E N
Sbjct: 421 PGWAPTQGHIPSGVPYIGHAIDAFRNNEIERAMIVGKGSLFLGRMTNQFDGVSMIMEKNT 480
Query: 479 G-KGSASAGQDTAGIKKIVAEAMRNVAENIL 508
G K +G +K ++AEAMR A ++L
Sbjct: 481 GAKAEVGSGISENEVKTMIAEAMREFASHLL 511
>gi|150391322|ref|YP_001321371.1| Betaine reductase [Alkaliphilus metalliredigens QYMF]
gi|149951184|gb|ABR49712.1| Betaine reductase [Alkaliphilus metalliredigens QYMF]
Length = 513
Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats.
Identities = 279/511 (54%), Positives = 378/511 (73%), Gaps = 3/511 (0%)
Query: 1 MAKVAIKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQ 60
M+ +KGA YILVHAPD++ H+G+TQ G +L NPE EYLK +P+HLRS+E+ V YPPNQ
Sbjct: 1 MSYAVMKGAGYILVHAPDMVIHSGTTQIGEKLGNPESEYLKKLPNHLRSYEKVVAYPPNQ 60
Query: 61 VYIGNMAPEDLEKLPEPWYK-DAKKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEF 119
VYIGNM PE+L PW+ + + A+R GK GEIM Q EF +K DVF+LV +KEF
Sbjct: 61 VYIGNMKPEELRGYEMPWHTHEVESADRFGKVGEIMPQDEFIGFLKAVDVFDLVKLNKEF 120
Query: 120 TAQAAKLIENHPMMKTQDI-KLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTD 178
T + +E HP+M I K+ EG + +I + ++ H AE +Y+ K++GCVK+AH+TD
Sbjct: 121 TKEVRGKLEKHPLMTEALIAKIKEGEEQEDIDQFINNHHAEAIYQDHKIVGCVKRAHETD 180
Query: 179 ENLSAHTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAK 238
NL+AH M ENL KASG LS ++ ID+ +EY+IECSEEA GD+NQRGGGN AK
Sbjct: 181 SNLNAHIMFENLVAKASGALSFMNLIAKNDIDVTSIEYVIECSEEACGDMNQRGGGNFAK 240
Query: 239 AVGEKSGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDH 298
A+ E G VNATGSD R FCAAP HA+I AALV G+++NV+VV+GG+ KLGMNGKDH
Sbjct: 241 AIAEVVGAVNATGSDTRAFCAAPAHAMIQAAALVKGGVYENVVVVAGGATAKLGMNGKDH 300
Query: 299 VKKDLPLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAA 358
VKK++P+ ED++GGFAV++S +DGVNP+I T+++G+H + +GS+PQAV++ L+ PL+
Sbjct: 301 VKKEMPILEDVLGGFAVLVSKNDGVNPIIRTDLIGRHTVGTGSSPQAVITSLITAPLDKG 360
Query: 359 GLKMTDIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGV 418
GLK+TD+++YS E+QN +IT PAGAG+VPEAN KMIAAL V +G LE+ ++A F K HG+
Sbjct: 361 GLKITDVDRYSVEMQNPDITKPAGAGDVPEANYKMIAALGVKRGDLERAEVATFAKNHGM 420
Query: 419 VGFAPTQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEAND 478
G+APTQGHIPSGVP++GHAR + ++K MI+GKGSLFL R+TN FDG+SF++E ND
Sbjct: 421 PGWAPTQGHIPSGVPYLGHAREAFLNDEIKRAMIVGKGSLFLARMTNQFDGVSFILEKND 480
Query: 479 G-KGSASAGQDTAGIKKIVAEAMRNVAENIL 508
G G +K ++ EAM++ A ++L
Sbjct: 481 GLTEEKPQGISEDEVKSMIGEAMKDFASHLL 511
>gi|153939339|ref|YP_001390612.1| glycine reductase complex component C, beta subunit [Clostridium
botulinum F str. Langeland]
gi|152935235|gb|ABS40733.1| glycine reductase complex component C, beta subunit [Clostridium
botulinum F str. Langeland]
Length = 512
Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats.
Identities = 275/506 (54%), Positives = 372/506 (73%), Gaps = 2/506 (0%)
Query: 6 IKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQVYIGN 65
IKGASYIL H PD++ HNG+TQT ++ NP EYL+ +P HLR+FE+ +NY PNQ YIGN
Sbjct: 6 IKGASYILAHTPDMVLHNGTTQTTEKVVNPNSEYLEELPKHLRNFEDVLNYAPNQTYIGN 65
Query: 66 MAPEDLEKLPEPWY-KDAKKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEFTAQAA 124
M P+ L ++ PW+ K +++ R GK GEIM Q EF LM+ DVF+LV K F
Sbjct: 66 MTPDQLGEIEMPWWDKKIEESSRFGKLGEIMPQDEFIGLMEICDVFDLVLLEKSFVDNVK 125
Query: 125 KLIENHPMMKTQDI-KLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTDENLSA 183
+E HP++ I K+ EG I EIKK+VD EGLY +G L+GCVK+AHD D NLSA
Sbjct: 126 IKLEKHPLIDENMISKIKEGVAIEEIKKIVDEEGGEGLYNEGTLVGCVKKAHDVDANLSA 185
Query: 184 HTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAKAVGEK 243
HTMLENL KASG+LS ++ ID ++Y+IECSEEA GD+NQRGGGN AK++ E
Sbjct: 186 HTMLENLVVKASGVLSLLNLIAKNNIDPNSIDYVIECSEEACGDMNQRGGGNFAKSLAEV 245
Query: 244 SGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDHVKKDL 303
+G NATG+D+RGFCA P H++I +ALV +G++ NV++ GG+ KLGMNGKDHVKK++
Sbjct: 246 AGFTNATGADMRGFCAGPSHSLIAASALVQSGVYDNVVIAGGGASAKLGMNGKDHVKKEM 305
Query: 304 PLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAAGLKMT 363
P+ ED +GGFAV++S +DG+NP++ T++VGKH + +GS+PQAV+S LV DPL+ AGLK+T
Sbjct: 306 PILEDCLGGFAVLVSKNDGINPILRTDLVGKHTVGTGSSPQAVISSLVTDPLDKAGLKIT 365
Query: 364 DIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGVVGFAP 423
D++KYS E+QN +IT PAGAG+VP+AN KMI AL V K +EK ++ +F++ HG+ G+AP
Sbjct: 366 DVDKYSVEMQNPDITKPAGAGDVPQANYKMIGALGVKKKHIEKKELKDFIQNHGMSGWAP 425
Query: 424 TQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEANDGKGSA 483
TQGHIPSGVP+IG AR D+ G L M++GKGSLFLGR+TNLFDG+S +IE N G
Sbjct: 426 TQGHIPSGVPYIGFARNDLTEGNLNRVMVVGKGSLFLGRMTNLFDGVSIIIERNTGYKEE 485
Query: 484 SAGQDTAGIKKIVAEAMRNVAENILK 509
G ++KI+AE+++ +A +++
Sbjct: 486 EKGISEDKVRKIIAESIKKLASQLVE 511
>gi|11065690|emb|CAC14302.1| large subunit of protein C [Clostridium sticklandii]
Length = 511
Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats.
Identities = 275/509 (54%), Positives = 373/509 (73%), Gaps = 2/509 (0%)
Query: 1 MAKVAIKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQ 60
M K +K ASYILVH PD++ HNG+T +L NP+ E+LK + + +R++EE VNY PNQ
Sbjct: 1 MTKPVLKNASYILVHTPDMIIHNGTTYQMEKLGNPDSEFLKNVGNFIRNYEEVVNYAPNQ 60
Query: 61 VYIGNMAPEDLEKLPEPWYKDAKKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEFT 120
VYIGN PE+L + PW+++ + R+G+FGEIM Q EF ++K AD F+LV + +F+
Sbjct: 61 VYIGNKKPEELNDIATPWFENPVQGTREGRFGEIMPQDEFIGMLKIADSFDLVKLTADFS 120
Query: 121 AQAAKLIENHPMMKTQDI-KLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTDE 179
+ ++ H + ++ K + +I IK V+ H AEGLY G+L+GCVK+AH+ D
Sbjct: 121 KAVVEKLKAHELFSDAELEKFKDSEEIDSIKTFVNEHHAEGLYNMGELVGCVKRAHEVDN 180
Query: 180 NLSAHTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAKA 239
+L+AH M ENL KASG+L+ H+ K + +VEY+IECSEEA GD+NQRGGGN AK+
Sbjct: 181 SLTAHIMFENLVVKASGVLAVKHLMKNSSVKADEVEYVIECSEEACGDMNQRGGGNFAKS 240
Query: 240 VGEKSGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDHV 299
+ E NATGSD RGFCA P HA+I+ AALV +G++K+V+VV GG+ KLGMN KDH+
Sbjct: 241 IAEACSFTNATGSDTRGFCAGPTHALINAAALVKSGVYKHVVVVGGGATAKLGMNAKDHI 300
Query: 300 KKDLPLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAAG 359
KK++P+ ED++GGFAV++S DDG++PV NT++VG+H + +GS+PQAV++ L+ PL+ G
Sbjct: 301 KKNIPVLEDVLGGFAVLVSEDDGISPVFNTDLVGRHTVGTGSSPQAVITSLITMPLDKGG 360
Query: 360 LKMTDIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGVV 419
LK+TDI KYS E+QN +IT PAGAG+VPEAN KMIAAL V +G LEK+ + F K+HG+
Sbjct: 361 LKITDISKYSVEMQNPDITKPAGAGDVPEANYKMIAALGVKRGDLEKSSLPTFGKEHGMP 420
Query: 420 GFAPTQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEANDG 479
GFAPTQGHIPSGVPFIG A +M KL MI+GKGSLFLGR+TN FDG+SF++E NDG
Sbjct: 421 GFAPTQGHIPSGVPFIGFAIDEMKENKLDKVMIVGKGSLFLGRMTNQFDGVSFVMEKNDG 480
Query: 480 KGSASAGQ-DTAGIKKIVAEAMRNVAENI 507
KG A Q D IK ++A+AMR +AEN+
Sbjct: 481 KGEDKAPQVDEQQIKSMIADAMRKLAENL 509
>gi|126699967|ref|YP_001088864.1| glycine/sarcosine/betaine reductase complex component C beta
subunit [Clostridium difficile 630]
gi|115251404|emb|CAJ69236.1| glycine/sarcosine/betaine reductase complex component C beta
subunit [Clostridium difficile 630]
Length = 510
Score = 564 bits (1453), Expect = e-159, Method: Composition-based stats.
Identities = 285/510 (55%), Positives = 367/510 (71%), Gaps = 2/510 (0%)
Query: 1 MAKVAIKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQ 60
M +KGA Y+L+H PD++ NGST T R NP+ E+LK + +H+RS+E+ VNY PNQ
Sbjct: 1 MTYPVLKGAGYVLIHTPDMIVQNGSTCTVERATNPDSEFLKEVSNHIRSYEDVVNYMPNQ 60
Query: 61 VYIGNMAPEDLEKLPEPWYKDAKKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEFT 120
VYIGN PE+L LP PW + + R GKFGEIM Q EF LM+ +D F+LV S+EF
Sbjct: 61 VYIGNRRPEELRDLPMPWCEQKIEGTRNGKFGEIMPQDEFIALMQISDAFDLVKLSQEFI 120
Query: 121 AQAAKLIEN-HPMMKTQDIKLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTDE 179
+ IEN +P + KL +G DI E K++V H AEGLY GK +G VK+AHD D
Sbjct: 121 DEVKPKIENNYPEIAPFVGKL-KGDDIEEGKELVATHIAEGLYHDGKFVGYVKRAHDVDV 179
Query: 180 NLSAHTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAKA 239
NL+AHTM ENL KASG+LSA M + ID +++Y+IECSEEA GDINQRGGGN AK+
Sbjct: 180 NLNAHTMFENLVVKASGVLSAIQMLRHSKIDPAEIDYVIECSEEACGDINQRGGGNFAKS 239
Query: 240 VGEKSGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDHV 299
+ E +G NATGSD RGFCAAP HA+I AALV AGI KNVMVV+GG+ KLGMN KDHV
Sbjct: 240 IAEIAGLQNATGSDTRGFCAAPTHALIQAAALVKAGIHKNVMVVAGGASAKLGMNAKDHV 299
Query: 300 KKDLPLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAAG 359
KK LP+ ED++GGFAV++S +DGVNPVI T++ GKH + +GS+PQAVM+ L+ L+ A
Sbjct: 300 KKGLPVLEDVVGGFAVLVSENDGVNPVIRTDLTGKHTVGTGSSPQAVMTALITSGLDRAN 359
Query: 360 LKMTDIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGVV 419
LK+TD++ YS E+QN +IT PAGAG+VPEAN KMI AL+V +G LEK ++ +FV G+
Sbjct: 360 LKITDVDVYSVEMQNPDITKPAGAGDVPEANYKMIGALAVKRGDLEKKELKDFVSNKGLP 419
Query: 420 GFAPTQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEANDG 479
G+APTQGHIPSG P+IG D+ G MI+GKGSLFLGR+TNLFDG+SF+ E N G
Sbjct: 420 GWAPTQGHIPSGAPYIGFLIDDLTTGNRNRAMIVGKGSLFLGRMTNLFDGVSFIAERNTG 479
Query: 480 KGSASAGQDTAGIKKIVAEAMRNVAENILK 509
++G IKKI+AE+M+ +A ++L+
Sbjct: 480 VTEETSGISKDEIKKIIAESMKKLALDMLE 509
>gi|20808287|ref|NP_623458.1| 3-oxoacyl-(acyl-carrier-protein) synthase III [Thermoanaerobacter
tengcongensis MB4]
gi|20516889|gb|AAM25062.1| 3-oxoacyl-(acyl-carrier-protein) synthase III [Thermoanaerobacter
tengcongensis MB4]
Length = 509
Score = 561 bits (1445), Expect = e-158, Method: Composition-based stats.
Identities = 271/507 (53%), Positives = 379/507 (74%), Gaps = 4/507 (0%)
Query: 6 IKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQVYIGN 65
IKG S+ILVH P+++ G+TQ R N +YL I ++RS+E+ ++YPPNQ YIGN
Sbjct: 5 IKGCSHILVHVPNVMLEAGTTQILER-ENKNSDYLLKINDYIRSYEDCISYPPNQAYIGN 63
Query: 66 MAPEDLEKLPEPWYKDAKKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEFTAQAAK 125
+ P+ L +P PWY++ +R G FGEIM + EFY LM+ +DVF+LV K+F + +
Sbjct: 64 IYPDKLNDIPRPWYQNPLPPKRFGSFGEIMPEDEFYALMQISDVFDLVLLEKDFVKEVRR 123
Query: 126 LIENHPMMKTQDI-KLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTDENLSAH 184
+E HP++ +D+ +L EG + EI++ ++ + A L GK++GCVK+AHD D LS+H
Sbjct: 124 KLEGHPLISEKDLSRLKEGVSLEEIERQIE-NKAVPLRFNGKIVGCVKKAHDKDITLSSH 182
Query: 185 TMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAKAVGEKS 244
MLENLATKAS +L+ H+ K G+ ++++YIIECSEEA GD+NQRGGGN AKA+GE
Sbjct: 183 VMLENLATKASAVLAFKHLLKNTGMSPEEIDYIIECSEEACGDMNQRGGGNFAKAIGEIV 242
Query: 245 GCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDHVKKDLP 304
GC NATG+DVRGFCA P HA+++ A+LV AG+FKN++VV+GG+ KLGMNG+DHVKK LP
Sbjct: 243 GCSNATGADVRGFCAGPAHALLNAASLVKAGVFKNIVVVAGGATAKLGMNGRDHVKKGLP 302
Query: 305 LFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAAGLKMTD 364
+ ED++GGFAV++S DDG+NP+I + +G+H I +G++PQAVM + +PL GLK+TD
Sbjct: 303 VLEDVLGGFAVLVSQDDGINPIIRLDSIGRHTIGAGASPQAVMHAVAVEPLERLGLKVTD 362
Query: 365 IEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGVVGFAPT 424
++KYS E+QN EIT PAGAG+VP+AN KMIAAL V +G +EK+QI EF+ KHG+ GFAPT
Sbjct: 363 VDKYSVEMQNPEITEPAGAGDVPKANYKMIAALGVKRGDIEKSQIDEFILKHGMPGFAPT 422
Query: 425 QGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEANDGKGSAS 484
QGHIPSGVP +GH R ++ G++K MIIGKGSLFL R+TNLFDG+S +IEAN
Sbjct: 423 QGHIPSGVPVLGHIREKILKGEIKRAMIIGKGSLFLARMTNLFDGISMIIEANP-GVKEE 481
Query: 485 AGQDTAGIKKIVAEAMRNVAENILKSQ 511
G + I+K++A+A+R++AE+++ S+
Sbjct: 482 KGVEEKEIRKMIAKALRDLAEHLIGSE 508
>gi|145952761|ref|ZP_01801769.1| hypothetical protein CdifQ_04002720 [Clostridium difficile
QCD-32g58]
Length = 515
Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats.
Identities = 284/510 (55%), Positives = 366/510 (71%), Gaps = 2/510 (0%)
Query: 1 MAKVAIKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQ 60
M +KGA Y+L+H PD++ NGST T R N + E+LK + +H+RS+E+ VNY PNQ
Sbjct: 6 MTYPVLKGAGYVLIHTPDMIVQNGSTCTVERATNSDSEFLKEVSNHIRSYEDVVNYMPNQ 65
Query: 61 VYIGNMAPEDLEKLPEPWYKDAKKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEFT 120
VYIGN PE+L LP PW + + R GKFGEIM Q EF LM+ +D F+LV S+EF
Sbjct: 66 VYIGNRRPEELRDLPMPWCEQKIEGTRNGKFGEIMPQDEFIALMQISDAFDLVKLSQEFI 125
Query: 121 AQAAKLIEN-HPMMKTQDIKLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTDE 179
+ IEN +P + KL +G DI E K++V H AEGLY GK +G VK+AHD D
Sbjct: 126 DEVKPKIENNYPEIAPFVGKL-KGDDIEEGKELVATHIAEGLYHDGKFVGYVKRAHDVDV 184
Query: 180 NLSAHTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAKA 239
NL+AHTM ENL KASG+LSA M + ID +++Y+IECSEEA GDINQRGGGN AK+
Sbjct: 185 NLNAHTMFENLVVKASGVLSAIQMLRHSKIDPAEIDYVIECSEEACGDINQRGGGNFAKS 244
Query: 240 VGEKSGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDHV 299
+ E +G NATGSD RGFCAAP HA+I AALV AGI KNVMVV+GG+ KLGMN KDHV
Sbjct: 245 IAEIAGLQNATGSDTRGFCAAPTHALIQAAALVKAGIHKNVMVVAGGASAKLGMNAKDHV 304
Query: 300 KKDLPLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAAG 359
KK LP+ ED++GGFAV++S +DGVNPVI T++ GKH + +GS+PQAVM+ L+ L+ A
Sbjct: 305 KKGLPVLEDVVGGFAVLVSENDGVNPVIRTDLTGKHTVGTGSSPQAVMTALITSGLDRAN 364
Query: 360 LKMTDIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGVV 419
LK+TD++ YS E+QN +IT PAGAG+VPEAN KMI AL+V +G LEK ++ +FV G+
Sbjct: 365 LKITDVDVYSVEMQNPDITKPAGAGDVPEANYKMIGALAVKRGDLEKKELKDFVSNKGLP 424
Query: 420 GFAPTQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEANDG 479
G+APTQGHIPSG P+IG D+ G MI+GKGSLFLGR+TNLFDG+SF+ E N G
Sbjct: 425 GWAPTQGHIPSGAPYIGFLIDDLTTGNRNRAMIVGKGSLFLGRMTNLFDGVSFIAERNTG 484
Query: 480 KGSASAGQDTAGIKKIVAEAMRNVAENILK 509
++G IKKI+AE+M+ +A ++L+
Sbjct: 485 VTEETSGISKDEIKKIIAESMKKLALDMLE 514
>gi|78044225|ref|YP_361191.1| glycine reductase complex, protein C [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996340|gb|ABB15239.1| glycine reductase complex, protein C [Carboxydothermus
hydrogenoformans Z-2901]
Length = 509
Score = 558 bits (1437), Expect = e-157, Method: Composition-based stats.
Identities = 283/505 (56%), Positives = 373/505 (73%), Gaps = 2/505 (0%)
Query: 6 IKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQVYIGN 65
+KG L+HAPDLL+HNG+TQT RL NP+ EYLK +P HLR +++AV Y PNQ YIGN
Sbjct: 4 LKGVGQCLIHAPDLLYHNGTTQTVERLKNPDSEYLKKLPEHLRKYDDAVAYAPNQAYIGN 63
Query: 66 MAPEDLEKLPEPWYKDA-KKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEFTAQAA 124
+ E+L+ +P PWY ++ A R GK+GEIM + EFY L+K AD F+LV + F +
Sbjct: 64 IGLEELKTIPRPWYTNSINGASRFGKYGEIMPEDEFYGLLKIADAFDLVILEESFQEEVK 123
Query: 125 KLIENHPMMKTQDI-KLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTDENLSA 183
+ + H ++ Q + +L EI+K+V +HTAEGLY KL+GCV+QAH+ DENLSA
Sbjct: 124 EKLAKHKLINEQLLARLTNAKPPGEIEKLVTSHTAEGLYLGEKLVGCVRQAHEIDENLSA 183
Query: 184 HTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAKAVGEK 243
H MLENL KASGIL+ H+ GI+ ++V+YIIECSEEA GD+NQRGGGN AKA+GE
Sbjct: 184 HIMLENLVVKASGILAVLHLLANTGINPEEVDYIIECSEEACGDMNQRGGGNFAKAIGEI 243
Query: 244 SGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDHVKKDL 303
+G VNA GSDVRGFCA P HA++H A+LV +G FKNV+VV GG+V KLGMNGKDHV K +
Sbjct: 244 AGLVNANGSDVRGFCAGPAHALLHAASLVKSGTFKNVVVVGGGAVAKLGMNGKDHVNKGM 303
Query: 304 PLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAAGLKMT 363
P+ EDM+G FA+++S +DG+NP+I +V+GKH I SG++PQ VM LV +PL G K+T
Sbjct: 304 PVLEDMLGAFAILVSENDGLNPIIRLDVIGKHNIGSGASPQQVMKALVAEPLAKLGRKIT 363
Query: 364 DIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGVVGFAP 423
+I+ YS E+QN E+T PAGAGNVPEAN KMI AL+VM G++ + I +FV+KHG+ GFAP
Sbjct: 364 EIDYYSVEMQNPELTEPAGAGNVPEANYKMIGALAVMAGEIGRADIHKFVEKHGLPGFAP 423
Query: 424 TQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEANDGKGSA 483
TQGHIPSGVP +G R ++ GK+ + M+IGKGSLFL R+TNLFDGLS LIE N GK
Sbjct: 424 TQGHIPSGVPALGFFRDALLEGKISSAMVIGKGSLFLARMTNLFDGLSLLIEKNPGKVEE 483
Query: 484 SAGQDTAGIKKIVAEAMRNVAENIL 508
+ G ++++VAE +R +A+ +L
Sbjct: 484 TTGLTKEAVREMVAEYLREMAKGLL 508
>gi|153853778|ref|ZP_01995134.1| hypothetical protein DORLON_01125 [Dorea longicatena DSM 13814]
gi|149753528|gb|EDM63459.1| hypothetical protein DORLON_01125 [Dorea longicatena DSM 13814]
Length = 512
Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats.
Identities = 275/506 (54%), Positives = 376/506 (74%), Gaps = 3/506 (0%)
Query: 6 IKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQVYIGN 65
IKGASY+LVH PD++ +NG+TQT R+ NP+ EYLKA+P HLRS+EEAV+Y PNQ YIGN
Sbjct: 5 IKGASYVLVHTPDMVLYNGTTQTTERVVNPDSEYLKAVPEHLRSYEEAVSYWPNQTYIGN 64
Query: 66 MAPEDLEKLPEPWYKDAKK-AERKGKFGEIMTQAEFYILMKHADVFELVYFSKEFTAQAA 124
P++L + P+Y K+ A+R GK+GEIM + EF +L++ D+FE+V K F A+
Sbjct: 65 AHPDELAAVEFPYYDKKKEGAKRYGKYGEIMPEEEFLLLVQACDMFEVVRLDKAFVAKYK 124
Query: 125 KLIENHPMMKTQDI-KLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTDENLSA 183
+ P++ I K+ EG +++EI+ +++ AE LY + +L+GCVK AHD D NLS+
Sbjct: 125 DVFAQDPIISDDIIEKIHEGVELSEIEALINEDHAEPLYFEHQLVGCVKPAHDIDVNLSS 184
Query: 184 HTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAKAVGEK 243
H M ENL +KAS +L+ + K GI+ DVEY+I+C+EEA GD+NQRGGGN AKA E
Sbjct: 185 HIMHENLMSKASSVLALLYAVKNAGIEKSDVEYVIDCAEEACGDMNQRGGGNFAKAAAEV 244
Query: 244 SGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDHVKKDL 303
+G VNATGSD RGFCAAP HA+I AALV +G +K V+V +GG KLGMNGKDHVKK L
Sbjct: 245 AGLVNATGSDARGFCAAPTHALIEAAALVKSGAYKTVVVTAGGCTAKLGMNGKDHVKKGL 304
Query: 304 PLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAAGLKMT 363
P+ ED +GGFAV++S +DGVNP I+ +++G+H + +GSAPQ V+ LV DPL+ G+K+T
Sbjct: 305 PILEDCLGGFAVVVSENDGVNPEIDLDMLGRHSVGTGSAPQNVIGSLVADPLDRVGMKIT 364
Query: 364 DIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGVVGFAP 423
DI+K+S E+QN +IT PAGAG+VP AN KMI AL+V G+LE+ ++ F K+HG+ G+AP
Sbjct: 365 DIDKFSPEMQNPDITKPAGAGDVPLANYKMIGALAVKSGELERKELVNFTKEHGLTGWAP 424
Query: 424 TQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEAN-DGKGS 482
TQGHIPSGVP+IG AR D+++GK+KN MIIGKGSLFLGR+TNLFDG+SF+I N +
Sbjct: 425 TQGHIPSGVPYIGFAREDILSGKIKNAMIIGKGSLFLGRMTNLFDGVSFVIHGNMAAEEK 484
Query: 483 ASAGQDTAGIKKIVAEAMRNVAENIL 508
A++G +K ++A+AM+ A ++
Sbjct: 485 AASGVSEEEVKGLIAKAMKEFAATLM 510
>gi|51894003|ref|YP_076694.1| glycine reductase complex C [Symbiobacterium thermophilum IAM
14863]
gi|51857692|dbj|BAD41850.1| glycine reductase complex C [Symbiobacterium thermophilum IAM
14863]
Length = 890
Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats.
Identities = 258/480 (53%), Positives = 351/480 (73%), Gaps = 2/480 (0%)
Query: 1 MAKVAIKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQ 60
M + I+GA+Y L+HAP+LL H G+T R NPE YL +P HLRSFEEA+ YPPNQ
Sbjct: 1 MTEPVIRGAAYCLIHAPNLLVHYGTTPAMERRLNPESPYLARLPRHLRSFEEALAYPPNQ 60
Query: 61 VYIGNMAPEDLEKLPEPWYKD-AKKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEF 119
Y+G + P++L ++P PWY+ + AER+ ++GE+M + EF L+K D F+LV F
Sbjct: 61 TYLGRLRPDELARIPRPWYEHPVEGAEREARYGEMMPEDEFLALLKLVDAFDLVRLEAGF 120
Query: 120 TAQAAKLIENHPMMKTQDIKLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTDE 179
A+ A+ + HP+ +LG G + AE++++++ A LY +L+G V++AH+ DE
Sbjct: 121 AAEMAERLAAHPLWAADAARLGTGVEQAELQRLLEEKAAP-LYLGDRLVGVVRRAHEHDE 179
Query: 180 NLSAHTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAKA 239
LS+H MLENL TKAS +L H+ G+ ++VEYIIECSEEA GD+NQRGGGN AKA
Sbjct: 180 TLSSHVMLENLVTKASAVLGLRHLFARTGVKPEEVEYIIECSEEACGDMNQRGGGNFAKA 239
Query: 240 VGEKSGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDHV 299
+GE +GCVNATGSD R FCA P HA+I AAL+ AG+F++V+V++GG+ KLG+N +DHV
Sbjct: 240 IGEMAGCVNATGSDTRSFCAGPTHALIEAAALIRAGVFRHVVVLAGGTPAKLGLNSRDHV 299
Query: 300 KKDLPLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAAG 359
K LP+ ED+IG FAV LSADD +P + +VVG+H I SGS+PQAVM LV +PL AG
Sbjct: 300 AKGLPVLEDVIGAFAVHLSADDHTSPRVRLDVVGRHKIGSGSSPQAVMEALVTEPLERAG 359
Query: 360 LKMTDIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGVV 419
LK++D+++Y E+QN E+T PAGAG+VP+AN KMIAAL+V +G++ + ++ FV HG+
Sbjct: 360 LKLSDVDRYGVEMQNPELTEPAGAGDVPQANYKMIAALAVKRGEIGRAELPAFVAAHGMP 419
Query: 420 GFAPTQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEANDG 479
GFAPTQGHIPSGVP IGH R +MAG+++ M+IGKGSLFLGR+TNLFDG+S L+E N G
Sbjct: 420 GFAPTQGHIPSGVPVIGHVRDAIMAGEIRRAMVIGKGSLFLGRMTNLFDGVSVLLERNPG 479
>gi|85860133|ref|YP_462335.1| glycine reductase complex protein C large subunit [Syntrophus
aciditrophicus SB]
gi|85723224|gb|ABC78167.1| glycine reductase complex protein C large subunit [Syntrophus
aciditrophicus SB]
Length = 651
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 215/489 (43%), Positives = 317/489 (64%), Gaps = 4/489 (0%)
Query: 1 MAKVAIKGASYILVHAPDLLFHNGSTQTGTRLANPEDEYLKAIPSHLRSFEEAVNYPPNQ 60
M I+ SYILVH P + + ++ +A+ L + +HLR +E+AV YPPNQ
Sbjct: 162 MPDPVIQACSYILVHVPGFVRY--GSKPSREIADSPGAALSVLENHLRIYEDAVAYPPNQ 219
Query: 61 VYIGNMAPEDLEKLPEPWYKDA-KKAERKGKFGEIMTQAEFYILMKHADVFELVYFSKEF 119
V+IGN+ P+ L + +PWY+ A R G +GEIM Q EF LMK AD F+L++ +E
Sbjct: 220 VFIGNLHPDSLNGIEQPWYRHPLSDASRYGVYGEIMPQEEFLGLMKLADDFDLIWLEREA 279
Query: 120 TAQAAKLIENHPMMKTQDI-KLGEGHDIAEIKKMVDAHTAEGLYEQGKLIGCVKQAHDTD 178
+++HP K D+ K+ G D+ I + ++ + LY +G++ GC+ + HD D
Sbjct: 280 APLLRGALQSHPFWKDSDLGKIDGGVDMEHIHERIENKGSLPLYFRGRIAGCIHRHHDQD 339
Query: 179 ENLSAHTMLENLATKASGILSAWHMGKLEGIDMKDVEYIIECSEEAAGDINQRGGGNIAK 238
+ L A ++ENL KASG L+ H+ K + K+VE ++ CSEEAAGD RGGG +AK
Sbjct: 340 DTLKAQVLMENLMAKASGALALKHLLKKADLPAKNVELLLNCSEEAAGDRYNRGGGGMAK 399
Query: 239 AVGEKSGCVNATGSDVRGFCAAPVHAIIHGAALVAAGIFKNVMVVSGGSVPKLGMNGKDH 298
A+GE GCV+ATG D++ FC P++A+++ +LV A +F+ V VV GGS+ KLGM K H
Sbjct: 400 AIGELCGCVSATGCDIKAFCVGPLYALLYAFSLVKARVFQRVAVVGGGSMAKLGMKFKGH 459
Query: 299 VKKDLPLFEDMIGGFAVMLSADDGVNPVINTEVVGKHVISSGSAPQAVMSVLVYDPLNAA 358
V K +P+ ED++GG A +++ DDG +P++ + +GKH I SGS+ Q +M LV PL+
Sbjct: 460 VAKGMPILEDVLGGIAFLVTGDDGESPLVRLDGIGKHDIGSGSSQQNIMESLVLKPLDRM 519
Query: 359 GLKMTDIEKYSAELQNHEITAPAGAGNVPEANVKMIAALSVMKGQLEKTQIAEFVKKHGV 418
G K+T +++Y+ ELQN E+T AG+GNVP N +MI AL+V++ ++++ I FV KHG+
Sbjct: 520 GKKITAVDRYAVELQNPEVTVSAGSGNVPLTNYRMIGALAVLRNEIQRGDIDRFVLKHGM 579
Query: 419 VGFAPTQGHIPSGVPFIGHARRDMMAGKLKNTMIIGKGSLFLGRLTNLFDGLSFLIEAND 478
GF+PTQGHIP+ VPF+GHA + G++ N M I +GSLFLGR+T L DGLSF IE N
Sbjct: 580 PGFSPTQGHIPAAVPFLGHAVDAIKRGEMNNAMFIARGSLFLGRMTQLSDGLSFFIEKNP 639
Query: 479 GKGSASAGQ 487
GK ++ +
Sbjct: 640 GKQKSTRSE 648
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.316 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,862,872,270
Number of Sequences: 5470121
Number of extensions: 81310259
Number of successful extensions: 232816
Number of sequences better than 1.0e-05: 17
Number of HSP's better than 0.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 232760
Number of HSP's gapped (non-prelim): 17
length of query: 512
length of database: 1,894,087,724
effective HSP length: 137
effective length of query: 375
effective length of database: 1,144,681,147
effective search space: 429255430125
effective search space used: 429255430125
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 132 (55.5 bits)