Kingdom | Category | Genus/Species | Count |
---|---|---|---|
  |   | 116 | |
Archaea |   |   | 8 |
  |   | 116 | |
  | Crenarchaeota |   | 2 |
  |   | Aeropyrum pernix (ape) | 2 |
  | Euryarchaeota |   | 5 |
  |   | Archaeoglobus fulgidus (afu) | 1 |
  |   | Halobacterium salinarum R1 (hsl) | 1 |
  |   | Methanosarcina acetivorans (mac) | 1 |
  |   | Uncultured methanogenic archaeon RC-I (rci) | 2 |
  | Korarchaeota |   | 1 |
  |   | Candidatus Korarchaeum cryptofilum (kcr) | 1 |
Bacteria |   |   | 3167 |
  | Acidobacteria |   | 2 |
  |   | Solibacter usitatus (sus) | 2 |
  | Actinobacteria |   | 45 |
  |   | Arthrobacter aurescens (aau) | 1 |
  |   | Corynebacterium efficiens (cef) | 1 |
  |   | Clavibacter michiganensis subsp. michiganensis (cmi) | 1 |
  |   | Frankia sp. EAN1pec (fre) | 1 |
  |   | Kineococcus radiotolerans (kra) | 4 |
  |   | Kocuria rhizophila (krh) | 2 |
  |   | Mycobacterium gilvum (mgi) | 1 |
  |   | Mycobacterium sp. JLS (mjl) | 2 |
  |   | Mycobacterium marinum M (mmi) | 1 |
  |   | Mycobacterium smegmatis (msm) | 4 |
  |   | Nocardia farcinica (nfa) | 3 |
  |   | Rhodococcus sp. RHA1 (rha) | 2 |
  |   | Rubrobacter xylanophilus (rxy) | 8 |
  |   | Streptomyces coelicolor (sco) | 2 |
  |   | Saccharopolyspora erythraea (sen) | 5 |
  |   | Streptomyces griseus (sgr) | 1 |
  |   | Streptomyces avermitilis (sma) | 2 |
  |   | Salinispora tropica (stp) | 4 |
  | Bacteroides |   | 11 |
  |   | Bacteroides thetaiotaomicron (bth) | 1 |
  |   | Flavobacterium johnsoniae (fjo) | 2 |
  |   | Gramella forsetii (gfo) | 3 |
  |   | Salinibacter ruber (sru) | 5 |
  | Cyanobacteria |   | 21 |
  |   | Acaryochloris marina (amr) | 4 |
  |   | Anabaena sp. PCC7120 (ana) | 2 |
  |   | Cyanobacteria Yellowstone A-Prime (cya) | 3 |
  |   | Cyanobacteria Yellowstone B-Prime (cyb) | 2 |
  |   | Gloeobacter violaceus (gvi) | 2 |
  |   | Nostoc punctiforme (npu) | 3 |
  |   | Synechococcus elongatus PCC7942 (syf) | 1 |
  |   | Synechococcus sp. PCC7002 (syp) | 2 |
  |   | Thermosynechococcus elongatus (tel) | 1 |
  |   | Trichodesmium erythraeum (ter) | 1 |
  | Deinococcus-Thermus |   | 6 |
  |   | Deinococcus geothermalis (dge) | 4 |
  |   | Thermus thermophilus HB27 (tth) | 1 |
  |   | Thermus thermophilus HB8 (ttj) | 1 |
  | Firmicutes |   | 63 |
  |   | Alkaliphilus metalliredigens (amt) | 3 |
  |   | Bacillus amyloliquefaciens (bay) | 1 |
  |   | Bacillus cereus ATCC 10987 (bca) | 1 |
  |   | Bacillus cereus ATCC 14579 (bce) | 1 |
  |   | Bacillus clausii (bcl) | 4 |
  |   | Bacillus cereus subsp. cytotoxis NVH 391-98 (bcy) | 2 |
  |   | Bacillus cereus ZK (bcz) | 1 |
  |   | Bacillus halodurans (bha) | 7 |
  |   | Bacillus licheniformis ATCC 14580 (bli) | 1 |
  |   | Bacillus pumilus (bpu) | 2 |
  |   | Bacillus subtilis (bsu) | 2 |
  |   | Bacillus thuringiensis Al Hakam (btl) | 1 |
  |   | Bacillus weihenstephanensis (bwe) | 1 |
  |   | Clostridium botulinum F Langeland (cbf) | 1 |
  |   | Clostridium difficile (cdf) | 2 |
  |   | Clostridium novyi (cno) | 1 |
  |   | Coprothermobacter proteolyticus (cpo) | 1 |
  |   | Clostridium thermocellum (cth) | 1 |
  |   | Candidatus Desulforudis audaxviator (dau) | 1 |
  |   | Desulfotomaculum reducens (drm) | 2 |
  |   | Exiguobacterium sibiricum (esi) | 1 |
  |   | Geobacillus kaustophilus (gka) | 4 |
  |   | Geobacillus thermodenitrificans (gtn) | 4 |
  |   | Lactococcus lactis subsp. cremoris MG1363 (llm) | 1 |
  |   | Listeria monocytogenes EGD-e (lmo) | 1 |
  |   | Lysinibacillus sphaericus (lsp) | 3 |
  |   | Natranaerobius thermophilus (nth) | 4 |
  |   | Oceanobacillus iheyensis (oih) | 6 |
  |   | Pelotomaculum thermopropionicum (pth) | 1 |
  |   | Staphylococcus saprophyticus (ssp) | 1 |
  |   | Symbiobacterium thermophilum (sth) | 1 |
  | Green nonsulfur bacteria |   | 5 |
  |   | Chloroflexus aurantiacus (cau) | 2 |
  |   | Roseiflexus castenholzii DSM13941 (rca) | 2 |
  |   | Roseiflexus sp. RS-1 (rrs) | 1 |
  | Green sulfur bacteria |   | 6 |
  |   | Chlorobium chlorochromatii (cch) | 1 |
  |   | Chlorobium phaeobacteroides BS1 (cpb) | 1 |
  |   | Chloroherpeton thalassium (cts) | 2 |
  |   | Prosthecochloris aestuarii (paa) | 1 |
  |   | Prosthecochloris vibrioformis (pvi) | 1 |
  | Hyperthermophilic bacteria |   | 1 |
  |   | Fervidobacterium nodosum (fno) | 1 |
  | Planctomyces |   | 1 |
  |   | Rhodopirellula baltica (rba) | 1 |
  | Proteobacteria |   | 3003 |
  |   | Acidovorax avenae (aav) | 6 |
  |   | Acinetobacter baumannii ACICU (abc) | 4 |
  |   | Acinetobacter baumannii SDF (abm) | 2 |
  |   | Alcanivorax borkumensis (abo) | 74 |
  |   | Arcobacter butzleri (abu) | 3 |
  |   | Acinetobacter baumannii AYE (aby) | 1 |
  |   | Acinetobacter sp. ADP1 (aci) | 2 |
  |   | Acidiphilium cryptum JF-5 (acr) | 11 |
  |   | Anaeromyxobacter dehalogenans (ade) | 2 |
  |   | Alkalilimnicola ehrlichei (aeh) | 87 |
  |   | Acidithiobacillus ferrooxidans (afe) | 4 |
  |   | Aeromonas hydrophila (aha) | 25 |
  |   | Acidovorax sp. JS42 (ajs) | 3 |
  |   | Alteromonas macleodii (amc) | 7 |
  |   | Anaeromyxobacter sp. K (ank) | 4 |
  |   | Actinobacillus pleuropneumoniae AP76 (serotype 7) (apa) | 3 |
  |   | Anaplasma phagocytophilum (aph) | 1 |
  |   | Actinobacillus pleuropneumoniae L20 (serotype 5b) (apl) | 1 |
  |   | Aeromonas salmonicida (asa) | 23 |
  |   | Actinobacillus succinogenes (asu) | 4 |
  |   | Agrobacterium tumefaciens C58 (Cereon) (atc) | 9 |
  |   | Agrobacterium tumefaciens C58 (UWash/Dupont) (atu) | 3 |
  |   | Azorhizobium caulinodans (azc) | 8 |
  |   | Azoarcus sp. BH72 (azo) | 12 |
  |   | Burkholderia ambifaria MC40-6 (bac) | 3 |
  |   | Burkholderia cepacia (bam) | 3 |
  |   | Bordetella avium (bav) | 7 |
  |   | Bdellovibrio bacteriovorus (bba) | 3 |
  |   | Bordetella bronchiseptica (bbr) | 16 |
  |   | Bradyrhizobium sp. BTAi1 (bbt) | 4 |
  |   | Burkholderia cenocepacia HI2424 (bch) | 4 |
  |   | Burkholderia cenocepacia J2315 (bcj) | 7 |
  |   | Burkholderia cenocepacia MC0-3 (bcm) | 9 |
  |   | Brucella canis (bcs) | 2 |
  |   | Beijerinckia indica (bid) | 9 |
  |   | Bradyrhizobium japonicum (bja) | 7 |
  |   | Burkholderia multivorans ATCC 17616 (Tohoku) (bmj) | 11 |
  |   | Burkholderia mallei NCTC 10247 (bmn) | 3 |
  |   | Burkholderia mallei SAVP1 (bmv) | 1 |
  |   | Bordetella parapertussis (bpa) | 2 |
  |   | Burkholderia pseudomallei 668 (bpd) | 3 |
  |   | Bordetella pertussis (bpe) | 2 |
  |   | Burkholderia phymatum (bph) | 12 |
  |   | Burkholderia pseudomallei 1106a (bpl) | 2 |
  |   | Burkholderia pseudomallei 1710b (bpm) | 2 |
  |   | Burkholderia pseudomallei K96243 (bps) | 1 |
  |   | Bordetella petrii (bpt) | 13 |
  |   | Burkholderia phytofirmans (bpy) | 13 |
  |   | Bartonella quintana (bqu) | 1 |
  |   | Bradyrhizobium sp. ORS278 (bra) | 1 |
  |   | Burkholderia thailandensis (bte) | 6 |
  |   | Burkholderia sp. 383 (bur) | 12 |
  |   | Burkholderia vietnamiensis (bvi) | 10 |
  |   | Burkholderia xenovorans (bxe) | 10 |
  |   | Caulobacter sp. K31 (cak) | 1 |
  |   | Coxiella burnetii RSA 331 (cbs) | 1 |
  |   | Caulobacter crescentus (ccr) | 1 |
  |   | Cellvibrio japonicus (cja) | 56 |
  |   | Campylobacter jejuni 81116 (cju) | 1 |
  |   | Citrobacter koseri ATCC BAA-895 (cko) | 3 |
  |   | Colwellia psychrerythraea (cps) | 8 |
  |   | Candidatus Carsonella ruddii (crp) | 3 |
  |   | Cupriavidus taiwanensis (cti) | 11 |
  |   | Chromobacterium violaceum (cvi) | 22 |
  |   | Delftia acidovorans (dac) | 10 |
  |   | Dechloromonas aromatica (dar) | 3 |
  |   | Desulfovibrio desulfuricans (dde) | 8 |
  |   | Candidatus Desulfococcus oleovorans (dol) | 1 |
  |   | Desulfotalea psychrophila (dps) | 7 |
  |   | Dinoroseobacter shibae (dsh) | 8 |
  |   | Desulfovibrio vulgaris DP4 (dvl) | 5 |
  |   | Azoarcus sp. EbN1 (eba) | 18 |
  |   | Erwinia carotovora (eca) | 18 |
  |   | Escherichia coli O157 EC4115 (EHEC) (ecf) | 1 |
  |   | Escherichia coli ATCC 8739 (ecl) | 3 |
  |   | Escherichia coli SECEC (ecm) | 1 |
  |   | Escherichia coli APEC O1 (ecv) | 1 |
  |   | Escherichia coli E24377A (ecw) | 1 |
  |   | Escherichia coli HS (ecx) | 1 |
  |   | Enterobacter sp. 638 (ent) | 9 |
  |   | Enterobacter sakazakii (esa) | 8 |
  |   | Erwinia tasmaniensis (eta) | 28 |
  |   | Francisella philomiragia (fph) | 1 |
  |   | Geobacter bemidjiensis (gbm) | 3 |
  |   | Gluconacetobacter diazotrophicus (gdi) | 6 |
  |   | Geobacter lovleyi (glo) | 6 |
  |   | Geobacter metallireducens (gme) | 2 |
  |   | Geobacter sulfurreducens (gsu) | 2 |
  |   | Geobacter uraniumreducens (gur) | 2 |
  |   | Hahella chejuensis (hch) | 149 |
  |   | Halorhodospira halophila (hha) | 27 |
  |   | Haemophilus influenzae PittEE (hip) | 1 |
  |   | Hyphomonas neptunium (hne) | 3 |
  |   | Idiomarina loihiensis (ilo) | 23 |
  |   | Jannaschia sp. CCS1 (jan) | 6 |
  |   | Klebsiella pneumoniae 342 (kpe) | 11 |
  |   | Klebsiella pneumoniae (kpn) | 12 |
  |   | Leptothrix cholodnii (lch) | 4 |
  |   | Legionella pneumophila Lens (lpf) | 2 |
  |   | Legionella pneumophila Philadelphia 1 (lpn) | 1 |
  |   | Magnetospirillum magneticum (mag) | 7 |
  |   | Marinobacter aquaeolei (maq) | 309 |
  |   | Methylococcus capsulatus (mca) | 7 |
  |   | Mesorhizobium sp. BNC1 (mes) | 6 |
  |   | Methylobacterium sp. 4-46 (met) | 12 |
  |   | Methylobacterium extorquens (mex) | 4 |
  |   | Methylobacillus flagellatus (mfa) | 5 |
  |   | Magnetococcus sp. MC-1 (mgm) | 3 |
  |   | Mesorhizobium loti (mlo) | 11 |
  |   | Maricaulis maris (mmr) | 1 |
  |   | Minibacterium massiliensis (mms) | 5 |
  |   | Marinomonas sp. MWYL1 (mmw) | 146 |
  |   | Methylobacterium populi (mpo) | 3 |
  |   | Methylibium petroleiphilum (mpt) | 2 |
  |   | Methylobacterium radiotolerans (mrd) | 7 |
  |   | Mannheimia succiniciproducens (msu) | 2 |
  |   | Myxococcus xanthus (mxa) | 4 |
  |   | Novosphingobium aromaticivorans (nar) | 1 |
  |   | Nitrosomonas eutropha (net) | 6 |
  |   | Nitrosomonas europaea (neu) | 4 |
  |   | Neisseria gonorrhoeae NCCP11945 (ngk) | 2 |
  |   | Nitrobacter hamburgensis (nha) | 2 |
  |   | Nitrosospira multiformis (nmu) | 2 |
  |   | Nitrosococcus oceani (noc) | 31 |
  |   | Ochrobactrum anthropi (oan) | 10 |
  |   | Pseudomonas aeruginosa PAO1 (pae) | 28 |
  |   | Pseudomonas aeruginosa PA7 (pap) | 122 |
  |   | Psychrobacter arcticum (par) | 3 |
  |   | Pseudoalteromonas atlantica (pat) | 15 |
  |   | Pseudomonas aeruginosa UCBPP-PA14 (pau) | 75 |
  |   | Pelobacter carbinolicus (pca) | 5 |
  |   | Psychrobacter cryohalolentis (pcr) | 11 |
  |   | Paracoccus denitrificans (pde) | 14 |
  |   | Pseudomonas entomophila (pen) | 48 |
  |   | Pseudomonas fluorescens Pf-5 (pfl) | 58 |
  |   | Pseudomonas fluorescens Pf0-1 (pfo) | 39 |
  |   | Pseudoalteromonas haloplanktis (pha) | 10 |
  |   | Psychromonas ingrahamii (pin) | 8 |
  |   | Parvibaculum lavamentivorans (pla) | 9 |
  |   | Photorhabdus luminescens (plu) | 10 |
  |   | Proteus mirabilis (pmr) | 6 |
  |   | Pasteurella multocida (pmu) | 2 |
  |   | Pseudomonas mendocina (pmy) | 118 |
  |   | Polaromonas naphthalenivorans (pna) | 5 |
  |   | Polynucleobacter sp. QLW-P1DMWA-1 (pnu) | 1 |
  |   | Polaromonas sp. JS666 (pol) | 13 |
  |   | Pelobacter propionicus (ppd) | 1 |
  |   | Pseudomonas putida F1 (ppf) | 27 |
  |   | Pseudomonas putida GB-1 (ppg) | 39 |
  |   | Photobacterium profundum (ppr) | 16 |
  |   | Pseudomonas putida KT2440 (ppu) | 13 |
  |   | Pseudomonas putida W619 (ppw) | 40 |
  |   | Psychrobacter sp. PRwf-1 (prw) | 3 |
  |   | Pseudomonas stutzeri (psa) | 136 |
  |   | Pseudomonas syringae pv. syringae B728a (psb) | 28 |
  |   | Pseudomonas syringae pv. phaseolicola 1448A (psp) | 29 |
  |   | Pseudomonas syringae pv. tomato DC3000 (pst) | 13 |
  |   | Candidatus Pelagibacter ubique (pub) | 1 |
  |   | Phenylobacterium zucineum (pzu) | 5 |
  |   | Roseobacter denitrificans (rde) | 16 |
  |   | Rhizobium etli CIAT 652 (rec) | 2 |
  |   | Ralstonia eutropha H16 (reh) | 9 |
  |   | Rhizobium etli CFN 42 (ret) | 1 |
  |   | Ralstonia eutropha JMP134 (reu) | 8 |
  |   | Rhodoferax ferrireducens (rfr) | 4 |
  |   | Rhizobium leguminosarum (rle) | 11 |
  |   | Candidatus Ruthia magnifica (rma) | 1 |
  |   | Ralstonia metallidurans (rme) | 19 |
  |   | Rhodopseudomonas palustris HaA2 (rpb) | 1 |
  |   | Rhodopseudomonas palustris BisB5 (rpd) | 1 |
  |   | Rhodopseudomonas palustris BisA53 (rpe) | 2 |
  |   | Ralstonia pickettii (rpi) | 9 |
  |   | Rhodopseudomonas palustris TIE-1 (rpt) | 3 |
  |   | Rhodospirillum rubrum (rru) | 7 |
  |   | Rhodobacter sphaeroides ATCC 17029 (rsh) | 7 |
  |   | Ralstonia solanacearum (rso) | 13 |
  |   | Rhodobacter sphaeroides 2.4.1 (rsp) | 4 |
  |   | Rhodobacter sphaeroides ATCC 17025 (rsq) | 5 |
  |   | Sphingopyxis alaskensis (sal) | 1 |
  |   | Syntrophus aciditrophicus (sat) | 1 |
  |   | Shewanella amazonensis (saz) | 9 |
  |   | Shigella boydii CDC 3083-94 (sbc) | 4 |
  |   | Shewanella baltica OS155 (sbl) | 1 |
  |   | Shewanella baltica OS185 (sbm) | 1 |
  |   | Shewanella baltica OS195 (sbn) | 7 |
  |   | Shigella boydii Sb227 (sbo) | 1 |
  |   | Sorangium cellulosum (scl) | 3 |
  |   | Saccharophagus degradans (sde) | 34 |
  |   | Shewanella denitrificans (sdn) | 3 |
  |   | Shigella dysenteriae (sdy) | 1 |
  |   | Salmonella enterica subsp. enterica serovar Choleraesuis (sec) | 3 |
  |   | Salmonella enterica subsp. enterica serovar Heidelberg (seh) | 1 |
  |   | Salmonella enterica subsp. arizonae (ses) | 6 |
  |   | Shewanella frigidimarina (sfr) | 6 |
  |   | Syntrophobacter fumaroxidans (sfu) | 1 |
  |   | Shigella flexneri 8401 (serotype 5b) (sfv) | 1 |
  |   | Shigella flexneri 2457T (serotype 2a) (sfx) | 1 |
  |   | Sodalis glossinidius (sgl) | 4 |
  |   | Shewanella sp. MR-4 (she) | 3 |
  |   | Shewanella halifaxensis (shl) | 2 |
  |   | Shewanella sp. MR-7 (shm) | 4 |
  |   | Shewanella sp. ANA-3 (shn) | 5 |
  |   | Shewanella sp. W3-18-1 (shw) | 3 |
  |   | Silicibacter pomeroyi (sil) | 10 |
  |   | Silicibacter sp. TM1040 (sit) | 9 |
  |   | Shewanella loihica (slo) | 11 |
  |   | Sinorhizobium medicae (smd) | 13 |
  |   | Sinorhizobium meliloti (sme) | 12 |
  |   | Stenotrophomonas maltophilia (sml) | 14 |
  |   | Stenotrophomonas maltophilia R551-3 (smt) | 10 |
  |   | Shewanella oneidensis (son) | 1 |
  |   | Serratia proteamaculans (spe) | 36 |
  |   | Shewanella pealeana (spl) | 2 |
  |   | Shewanella sediminis (sse) | 5 |
  |   | Salmonella typhimurium LT2 (stm) | 3 |
  |   | Sulfurovum sp. NBC37-1 (sun) | 2 |
  |   | Shewanella woodyi ATCC51908 (swd) | 7 |
  |   | Sphingomonas wittichii (swi) | 2 |
  |   | Thiobacillus denitrificans (tbd) | 8 |
  |   | Thiomicrospira crunogena (tcx) | 5 |
  |   | Vibrio cholerae O395 (vco) | 6 |
  |   | Verminephrobacter eiseniae (vei) | 6 |
  |   | Vibrio fischeri (vfi) | 2 |
  |   | Vibrio fischeri MJ11 (vfm) | 6 |
  |   | Vibrio harveyi (vha) | 7 |
  |   | Vibrio parahaemolyticus (vpa) | 12 |
  |   | Vibrio vulnificus CMCP6 (vvu) | 2 |
  |   | Vibrio vulnificus YJ016 (vvy) | 3 |
  |   | Wolinella succinogenes (wsu) | 3 |
  |   | Xanthomonas axonopodis (xac) | 4 |
  |   | Xanthobacter autotrophicus (xau) | 7 |
  |   | Xanthomonas campestris pv. campestris B100 (xca) | 5 |
  |   | Xanthomonas campestris pv. campestris 8004 (xcb) | 2 |
  |   | Xanthomonas campestris pv. vesicatoria (xcv) | 4 |
  |   | Xylella fastidiosa 9a5c (xfa) | 2 |
  |   | Xanthomonas oryzae MAFF311018 (xom) | 3 |
  |   | Xanthomonas oryzae PXO99A (xop) | 2 |
  |   | Yersinia enterocolitica (yen) | 14 |
  |   | Yersinia pseudotuberculosis PB1/+ (ypb) | 8 |
  |   | Yersinia pestis Angola (ypg) | 1 |
  |   | Yersinia pestis Pestoides (ypp) | 2 |
  |   | Yersinia pseudotuberculosis IP32953 (yps) | 1 |
  |   | Yersinia pseudotuberculosis YPIII (ypy) | 1 |
  |   | Zymomonas mobilis (zmo) | 1 |
  | Spirochete |   | 2 |
  |   | Leptospira biflexa serovar Patoc Patoc 1 (Ames) (lbf) | 1 |
  |   | Leptospira borgpetersenii L550 (lbl) | 1 |
  | Verrucomicrobia |   | 1 |
  |   | Akkermansia muciniphila (amu) | 1 |
Eukaryotes |   |   | 7 |
  | Animals |   | 2 |
  |   | Monodelphis domestica (opossum) (mdo) | 1 |
  |   | Nematostella vectensis (sea anemone) (nve) | 1 |
  | Fungi |   | 2 |
  |   | Fusarium graminearum (fgr) | 1 |
  |   | Neurospora crassa (ncr) | 1 |
  | Plants |   | 1 |
  |   | Ostreococcus lucimarinus (olu) | 1 |
  | Protists |   | 2 |
  |   | Leishmania major (lma) | 1 |
  |   | Monosiga brevicollis (mbr) | 1 |
NULL |   |   | 0 |
TOTAL |   |   | 3298 |
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