BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= FN1799
(264 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19705104|ref|NP_602599.1| Spermidine/putrescine transpor... 414 e-114
gi|34762706|ref|ZP_00143696.1| Spermidine/putrescine transp... 399 e-110
gi|148323759|gb|EDK89009.1| spermidine/putrescine ABC super... 395 e-108
gi|15639641|ref|NP_219091.1| spermidine/putrescine ABC tran... 225 2e-57
gi|148270534|ref|YP_001244994.1| Ornithine carbamoyltransfe... 224 6e-57
gi|15644130|ref|NP_229179.1| spermidine/putrescine ABC tran... 223 1e-56
gi|154249069|ref|YP_001409894.1| Ornithine carbamoyltransfe... 213 6e-54
gi|148378565|ref|YP_001253106.1| spermidine/putrescine tran... 213 9e-54
gi|153939862|ref|YP_001389927.1| putative spermidine/putres... 213 1e-53
gi|108805700|ref|YP_645637.1| binding-protein-dependent tra... 202 2e-50
gi|150020464|ref|YP_001305818.1| Ornithine carbamoyltransfe... 196 8e-49
gi|16127365|ref|NP_421929.1| spermidine/putrescine ABC tran... 194 3e-48
gi|152974813|ref|YP_001374330.1| Ornithine carbamoyltransfe... 194 5e-48
gi|30019439|ref|NP_831070.1| Spermidine/putrescine transpor... 192 2e-47
gi|17986697|ref|NP_539331.1| PUTRESCINE TRANSPORT SYSTEM PE... 191 5e-47
gi|23502472|ref|NP_698599.1| spermidine/putrescine ABC tran... 191 5e-47
gi|89204486|ref|ZP_01183063.1| Binding-protein-dependent tr... 190 6e-47
gi|153011245|ref|YP_001372459.1| Ornithine carbamoyltransfe... 189 1e-46
gi|30261390|ref|NP_843767.1| spermidine/putrescine ABC tran... 188 2e-46
gi|113935060|ref|ZP_01420959.1| Binding-protein-dependent t... 186 2e-45
gi|53804961|ref|YP_113364.1| spermidine/putrescine ABC tran... 183 7e-45
gi|15964470|ref|NP_384823.1| PROBABLE PUTRESCINE TRANSPORT ... 183 8e-45
gi|118442995|ref|YP_877311.1| spermidine/putrescine ABC tra... 181 3e-44
gi|150395540|ref|YP_001326007.1| Ornithine carbamoyltransfe... 181 3e-44
gi|78358711|ref|YP_390160.1| polyamine ABC transporter, per... 181 4e-44
gi|13475459|ref|NP_107023.1| ABC transporter, polyamine tra... 181 4e-44
gi|118728215|ref|ZP_01576781.1| binding-protein-dependent t... 181 4e-44
gi|116250538|ref|YP_766376.1| probable putrescine transport... 181 4e-44
gi|114770362|ref|ZP_01447900.1| Binding-protein-dependent t... 181 6e-44
gi|46578513|ref|YP_009321.1| spermidine/putrescine ABC tran... 180 6e-44
gi|59711924|ref|YP_204700.1| spermidine/putrescine ABC tran... 180 6e-44
gi|39937218|ref|NP_949494.1| ABC transporter, polyamine tra... 180 7e-44
gi|90413860|ref|ZP_01221847.1| putative spermidine/putresci... 180 1e-43
gi|153854794|ref|ZP_01996028.1| hypothetical protein DORLON... 179 1e-43
gi|154484066|ref|ZP_02026514.1| hypothetical protein EUBVEN... 179 1e-43
gi|47566173|ref|ZP_00237201.1| spermidine/putrescine ABC tr... 179 1e-43
gi|110632528|ref|YP_672736.1| binding-protein-dependent tra... 179 2e-43
gi|93005068|ref|YP_579505.1| binding-protein-dependent tran... 179 2e-43
gi|114705305|ref|ZP_01438213.1| spermidine/putrescine ABC t... 178 2e-43
gi|151937927|gb|EDN56772.1| ABC transporter, permease prote... 178 3e-43
gi|154502785|ref|ZP_02039845.1| hypothetical protein RUMGNA... 178 3e-43
gi|54309040|ref|YP_130060.1| spermidine/putrescine ABC tran... 177 4e-43
gi|28898301|ref|NP_797906.1| spermidine/putrescine ABC tran... 177 4e-43
gi|154246878|ref|YP_001417836.1| Ornithine carbamoyltransfe... 177 5e-43
gi|152980487|ref|YP_001354794.1| spermidine/putrescine tran... 177 6e-43
gi|127511909|ref|YP_001093106.1| binding-protein-dependent ... 177 6e-43
gi|156974569|ref|YP_001445476.1| hypothetical protein VIBHA... 177 6e-43
gi|94313322|ref|YP_586531.1| binding-protein-dependent tran... 177 6e-43
gi|84385475|ref|ZP_00988506.1| spermidine/putrescine ABC tr... 177 7e-43
gi|86356368|ref|YP_468260.1| spermidine/putrescine ABC tran... 177 8e-43
gi|126665311|ref|ZP_01736293.1| spermidine/putrescine ABC t... 176 9e-43
gi|119483301|ref|ZP_01618715.1| Binding-protein-dependent t... 176 1e-42
gi|116184830|ref|ZP_01474755.1| hypothetical protein VEx2w_... 176 2e-42
gi|90419924|ref|ZP_01227833.1| permease protein, ABC-type s... 176 2e-42
gi|152979402|ref|YP_001345031.1| Ornithine carbamoyltransfe... 175 2e-42
gi|149911833|ref|ZP_01900435.1| putative spermidine/putresc... 175 2e-42
gi|46446507|ref|YP_007872.1| probable spermidine/putrescine... 175 2e-42
gi|153816189|ref|ZP_01968857.1| hypothetical protein RUMTOR... 175 2e-42
gi|92116802|ref|YP_576531.1| binding-protein-dependent tran... 175 3e-42
gi|17402697|gb|AAL38941.1|AF325834_3 PotC [Salmonella enter... 175 3e-42
gi|126729924|ref|ZP_01745736.1| putrescine ABC transporter,... 175 3e-42
gi|110803872|ref|YP_699247.1| spermidine/putrescine ABC tra... 175 3e-42
gi|109649372|ref|ZP_01373260.1| binding-protein-dependent t... 174 3e-42
gi|125973266|ref|YP_001037176.1| binding-protein-dependent ... 174 4e-42
gi|75675201|ref|YP_317622.1| Binding-protein-dependent tran... 174 4e-42
gi|24372854|ref|NP_716896.1| polyamine ABC transporter, per... 174 5e-42
gi|94987273|ref|YP_595206.1| ABC-type spermidine/putrescine... 174 5e-42
gi|134096009|ref|YP_001101084.1| spermidine/putrescine tran... 174 5e-42
gi|15641437|ref|NP_231069.1| spermidine/putrescine ABC tran... 174 5e-42
gi|153896817|ref|ZP_02017385.1| binding-protein-dependent t... 174 5e-42
gi|18310952|ref|NP_562886.1| probable spermidine/putrescine... 174 6e-42
gi|89894209|ref|YP_517696.1| hypothetical protein DSY1463 [... 174 7e-42
gi|37679871|ref|NP_934480.1| spermidine/putrescine ABC tran... 173 8e-42
gi|110799954|ref|YP_696649.1| spermidine/putrescine ABC tra... 173 8e-42
gi|114564169|ref|YP_751683.1| binding-protein-dependent tra... 173 9e-42
gi|120599864|ref|YP_964438.1| binding-protein-dependent tra... 173 1e-41
gi|126668741|ref|ZP_01739690.1| putrescine ABC transporter,... 173 1e-41
gi|149191937|ref|ZP_01870169.1| spermidine/putrescine ABC t... 172 1e-41
gi|148976185|ref|ZP_01812928.1| spermidine/putrescine ABC t... 172 1e-41
gi|86145990|ref|ZP_01064317.1| spermidine/putrescine ABC tr... 172 2e-41
gi|103486603|ref|YP_616164.1| binding-protein-dependent tra... 172 2e-41
gi|114048488|ref|YP_739038.1| binding-protein-dependent tra... 172 2e-41
gi|126173352|ref|YP_001049501.1| binding-protein-dependent ... 172 2e-41
gi|53687109|ref|ZP_00107385.2| COG1177: ABC-type spermidine... 172 2e-41
gi|86139466|ref|ZP_01058035.1| putrescine ABC transporter, ... 172 2e-41
gi|120553284|ref|YP_957635.1| binding-protein-dependent tra... 172 2e-41
gi|149375456|ref|ZP_01893226.1| spermidine/putrescine ABC t... 172 2e-41
gi|153812232|ref|ZP_01964900.1| hypothetical protein RUMOBE... 172 2e-41
gi|121611659|ref|YP_999466.1| binding-protein-dependent tra... 171 3e-41
gi|114763507|ref|ZP_01442912.1| putrescine ABC transporter,... 171 3e-41
gi|27382214|ref|NP_773743.1| ABC transporter permease prote... 171 4e-41
gi|13473550|ref|NP_105118.1| spermidine/putrescine ABC tran... 171 5e-41
gi|99082821|ref|YP_614975.1| binding-protein-dependent tran... 171 5e-41
gi|118755924|ref|ZP_01603709.1| binding-protein-dependent t... 171 5e-41
gi|113971250|ref|YP_735043.1| binding-protein-dependent tra... 171 6e-41
gi|149913019|ref|ZP_01901553.1| putrescine ABC transporter,... 170 7e-41
gi|33151767|ref|NP_873120.1| spermidine/putrescine ABC tran... 170 7e-41
gi|77976849|ref|ZP_00832317.1| COG1177: ABC-type spermidine... 170 9e-41
gi|94499309|ref|ZP_01305847.1| polyamine ABC transporter, p... 170 1e-40
gi|77957671|ref|ZP_00821721.1| COG1177: ABC-type spermidine... 170 1e-40
gi|118072737|ref|ZP_01540924.1| binding-protein-dependent t... 170 1e-40
gi|77974800|ref|ZP_00830338.1| COG1177: ABC-type spermidine... 170 1e-40
gi|77960543|ref|ZP_00824410.1| COG1177: ABC-type spermidine... 169 1e-40
gi|83950998|ref|ZP_00959731.1| putrescine ABC transporter, ... 169 1e-40
gi|123441808|ref|YP_001005792.1| putrescine transport syste... 169 1e-40
gi|148258044|ref|YP_001242629.1| putrescine transport prote... 169 2e-40
gi|156934646|ref|YP_001438562.1| hypothetical protein ESA_0... 169 2e-40
gi|56698289|ref|YP_168662.1| putrescine ABC transporter, pe... 169 2e-40
gi|46203969|ref|ZP_00050694.2| COG1177: ABC-type spermidine... 169 2e-40
gi|51891607|ref|YP_074298.1| spermidine/putrescine ABC tran... 168 3e-40
gi|87120807|ref|ZP_01076700.1| putrescine ABC transporter, ... 168 3e-40
gi|89076801|ref|ZP_01163059.1| putative spermidine/putresci... 168 3e-40
gi|90578573|ref|ZP_01234383.1| spermidine/putrescine ABC tr... 168 3e-40
gi|84683817|ref|ZP_01011720.1| putrescine ABC transporter, ... 168 4e-40
gi|15598805|ref|NP_252299.1| polyamine transport protein Po... 168 4e-40
gi|84319589|ref|ZP_00967983.1| COG1177: ABC-type spermidine... 168 4e-40
gi|27365897|ref|NP_761425.1| spermidine/putrescine ABC tran... 168 4e-40
gi|16121616|ref|NP_404929.1| putrescine transport system pe... 167 4e-40
gi|153947049|ref|YP_001401607.1| putrescine ABC transporter... 167 4e-40
gi|153889979|ref|ZP_02011079.1| Ornithine carbamoyltransfer... 167 4e-40
gi|86609655|ref|YP_478417.1| spermidine/putrescine ABC tran... 167 5e-40
gi|118593583|ref|ZP_01550960.1| spermidine/putrescine ABC t... 167 5e-40
gi|15793791|ref|NP_283613.1| polyamine permease inner membr... 167 5e-40
gi|46202197|ref|ZP_00053605.2| COG1177: ABC-type spermidine... 167 6e-40
gi|84500628|ref|ZP_00998877.1| putrescine ABC transporter, ... 167 6e-40
gi|113939299|ref|ZP_01425156.1| binding-protein-dependent t... 167 6e-40
gi|152984554|ref|YP_001346916.1| polyamine transport protei... 167 6e-40
gi|126698610|ref|YP_001087507.1| putative spermidine/putres... 167 6e-40
gi|86607036|ref|YP_475799.1| spermidine/putrescine ABC tran... 167 7e-40
gi|85706008|ref|ZP_01037104.1| putrescine ABC transporter, ... 167 7e-40
gi|33593339|ref|NP_880983.1| putative inner membrane permea... 167 7e-40
gi|156934392|ref|YP_001438308.1| hypothetical protein ESA_0... 167 8e-40
gi|50121598|ref|YP_050765.1| putrescine transport system pe... 166 9e-40
gi|91975911|ref|YP_568570.1| binding-protein-dependent tran... 166 1e-39
gi|91794378|ref|YP_564029.1| binding-protein-dependent tran... 166 1e-39
gi|16764242|ref|NP_459857.1| putrescine transporter [Salmon... 166 1e-39
gi|120555053|ref|YP_959404.1| binding-protein-dependent tra... 166 1e-39
gi|17402705|gb|AAL38947.1|AF325836_3 PotC [Salmonella enter... 166 1e-39
gi|16759790|ref|NP_455407.1| putrescine transport system pe... 166 1e-39
gi|15676516|ref|NP_273656.1| spermidine/putrescine ABC tran... 166 1e-39
gi|15887957|ref|NP_353638.1| hypothetical protein AGR_C_108... 166 1e-39
gi|28558951|ref|NP_788211.1| putative putrescine ABC transp... 166 1e-39
gi|126734540|ref|ZP_01750286.1| putrescine ABC transporter,... 166 1e-39
gi|86748581|ref|YP_485077.1| Binding-protein-dependent tran... 166 1e-39
gi|59800649|ref|YP_207361.1| putative ABC transporter, perm... 166 2e-39
gi|146311029|ref|YP_001176103.1| binding-protein-dependent ... 166 2e-39
gi|52841373|ref|YP_095172.1| spermidine/putrescine ABC tran... 165 2e-39
gi|15806322|ref|NP_295028.1| spermidine/putrescine ABC tran... 165 2e-39
gi|33596326|ref|NP_883969.1| putative inner membrane permea... 165 2e-39
gi|67155541|ref|ZP_00417169.1| Binding-protein-dependent tr... 165 2e-39
gi|91779159|ref|YP_554367.1| ABC putrescine transporter, in... 165 2e-39
gi|126738595|ref|ZP_01754300.1| putrescine ABC transporter,... 165 2e-39
gi|17402685|gb|AAL38932.1|AF325831_3 PotC [Salmonella enter... 165 2e-39
gi|153094289|gb|EDN75153.1| spermidine/putrescine ABC super... 165 3e-39
gi|119775771|ref|YP_928511.1| binding-protein-dependent tra... 165 3e-39
gi|83592351|ref|YP_426103.1| Binding-protein-dependent tran... 165 3e-39
gi|152969445|ref|YP_001334554.1| putrescine transport prote... 165 3e-39
gi|50365326|ref|YP_053751.1| spermidine/putrescine ABC tran... 165 3e-39
gi|154252001|ref|YP_001412825.1| Ornithine carbamoyltransfe... 165 3e-39
gi|119875622|ref|ZP_01642684.1| binding-protein-dependent t... 165 3e-39
gi|149126358|ref|ZP_01851230.1| binding-protein-dependent t... 165 3e-39
gi|46143845|ref|ZP_00133976.2| COG1177: ABC-type spermidine... 165 3e-39
gi|157083378|gb|ABV13056.1| hypothetical protein CKO_01929 ... 165 3e-39
gi|82702109|ref|YP_411675.1| Binding-protein-dependent tran... 164 3e-39
gi|148358724|ref|YP_001249931.1| spermidine/putrescine ABC ... 164 5e-39
gi|75911251|ref|YP_325547.1| Binding-protein-dependent tran... 164 6e-39
gi|110677578|ref|YP_680585.1| putrescine ABC transporter, p... 164 6e-39
gi|83311721|ref|YP_421985.1| ABC-type spermidine/putrescine... 164 6e-39
gi|54294082|ref|YP_126497.1| hypothetical protein lpl1146 [... 164 6e-39
gi|114331323|ref|YP_747545.1| binding-protein-dependent tra... 164 6e-39
gi|152969684|ref|YP_001334793.1| spermidine/putrescine ABC ... 164 6e-39
gi|146338312|ref|YP_001203360.1| putrescine transport prote... 164 6e-39
gi|149204431|ref|ZP_01881398.1| putrescine ABC transporter,... 164 7e-39
gi|85716107|ref|ZP_01047083.1| Binding-protein-dependent tr... 163 7e-39
gi|54297096|ref|YP_123465.1| hypothetical protein lpp1141 [... 163 8e-39
gi|66048085|ref|YP_237926.1| Binding-protein-dependent tran... 163 9e-39
gi|116494512|ref|YP_806246.1| spermidine/putrescine ABC tra... 163 9e-39
gi|88861150|ref|ZP_01135784.1| Binding-protein-dependent tr... 163 1e-38
gi|119511369|ref|ZP_01630482.1| Binding-protein-dependent t... 163 1e-38
gi|126207770|ref|YP_001052995.1| spermidine/putrescine tran... 162 1e-38
gi|149377231|ref|ZP_01894979.1| binding-protein-dependent t... 162 1e-38
gi|115526076|ref|YP_782987.1| binding-protein-dependent tra... 162 1e-38
gi|71735980|ref|YP_276982.1| putrescine ABC transporter, pe... 162 1e-38
gi|83941877|ref|ZP_00954339.1| putrescine ABC transporter, ... 162 2e-38
gi|24112527|ref|NP_707037.1| spermidine/putrescine ABC tran... 162 2e-38
gi|77461622|ref|YP_351129.1| Binding-protein-dependent tran... 162 2e-38
gi|152997523|ref|YP_001342358.1| Ornithine carbamoyltransfe... 162 2e-38
gi|75255638|ref|ZP_00727417.1| COG1177: ABC-type spermidine... 162 2e-38
gi|82544410|ref|YP_408357.1| spermidine/putrescine transpor... 162 2e-38
gi|89095003|ref|ZP_01167932.1| putrescine ABC transporter, ... 162 2e-38
gi|90021011|ref|YP_526838.1| TonB-dependent receptor [Sacch... 162 2e-38
gi|118068023|ref|ZP_01536277.1| binding-protein-dependent t... 162 2e-38
gi|82777265|ref|YP_403614.1| spermidine/putrescine transpor... 162 2e-38
gi|83855354|ref|ZP_00948884.1| putrescine ABC transporter, ... 162 3e-38
gi|15801239|ref|NP_287256.1| spermidine/putrescine ABC tran... 162 3e-38
gi|77459366|ref|YP_348873.1| Binding-protein-dependent tran... 162 3e-38
gi|146311293|ref|YP_001176367.1| binding-protein-dependent ... 162 3e-38
gi|134302339|ref|YP_001122308.1| ABC transporter, permease ... 161 3e-38
gi|146280468|ref|YP_001170621.1| putrescine ABC transporter... 161 3e-38
gi|118592891|ref|ZP_01550279.1| Spermidine/putrescine trans... 161 3e-38
gi|151571875|gb|EDN37529.1| hypothetical protein FTDG_00318... 161 4e-38
gi|118037598|ref|ZP_01509004.1| binding-protein-dependent t... 161 4e-38
gi|30249824|ref|NP_841894.1| potC; putative spermidine/putr... 161 4e-38
gi|119483321|ref|ZP_01618735.1| polyamine transport protein... 161 4e-38
gi|28872413|ref|NP_795032.1| putrescine ABC transporter, pe... 161 4e-38
gi|45441086|ref|NP_992625.1| putrescine transport system pe... 161 4e-38
gi|157122028|gb|EDO66168.1| polyamine transporter [Francise... 161 4e-38
gi|17402693|gb|AAL38938.1|AF325833_3 PotC [Salmonella enter... 161 4e-38
gi|15894125|ref|NP_347474.1| ABC-type spermidine/putrescine... 161 5e-38
gi|3341856|gb|AAC27497.1| PotC [Actinobacillus actinomycete... 160 5e-38
gi|118497332|ref|YP_898382.1| ATP-binding cassette putresci... 160 5e-38
gi|152985751|ref|YP_001345790.1| polyamine transport protei... 160 6e-38
gi|17402709|gb|AAL38950.1|AF325837_3 PotC [Salmonella enter... 160 6e-38
gi|149187668|ref|ZP_01865965.1| putrescine transporter subu... 160 6e-38
gi|90425427|ref|YP_533797.1| binding-protein-dependent tran... 160 6e-38
gi|16760098|ref|NP_455715.1| spermidine/putrescine ABC tran... 160 7e-38
gi|56707694|ref|YP_169590.1| polyamine transporter, subunit... 160 7e-38
gi|70733207|ref|YP_262980.1| polyamine transport protein Po... 160 7e-38
gi|42518815|ref|NP_964745.1| ABC transporter permease compo... 160 7e-38
gi|116334426|ref|YP_795953.1| spermidine/putrescine ABC tra... 160 7e-38
gi|26991853|ref|NP_747278.1| putrescine ABC transporter, pe... 160 7e-38
gi|83716719|ref|YP_440145.1| putrescine ABC transporter, pe... 160 8e-38
gi|55821512|ref|YP_139954.1| Polyamine (putrescine/spermidi... 160 8e-38
gi|56413791|ref|YP_150866.1| spermidine/putrescine ABC tran... 160 8e-38
gi|89256069|ref|YP_513431.1| polyamine transporter, subunit... 160 9e-38
gi|148544851|ref|YP_001272221.1| Ornithine carbamoyltransfe... 160 9e-38
gi|146749577|gb|ABQ44374.1| spermidine/putrescine ABC trans... 160 1e-37
gi|110004085|emb|CAK98424.1| hypothetical abc transporter p... 160 1e-37
gi|26246880|ref|NP_752920.1| Putrescine transport system pe... 159 1e-37
gi|91209891|ref|YP_539877.1| putrescine transport system pe... 159 1e-37
gi|156863198|gb|EDO56629.1| hypothetical protein CLOL250_02... 159 1e-37
gi|116629919|ref|YP_815091.1| spermidine/putrescine ABC tra... 159 1e-37
gi|154498142|ref|ZP_02036520.1| hypothetical protein BACCAP... 159 1e-37
gi|150379254|ref|ZP_01918448.1| binding-protein-dependent t... 159 1e-37
gi|124267095|ref|YP_001021099.1| putrescine transport syste... 159 1e-37
gi|148550284|ref|YP_001270386.1| Ornithine carbamoyltransfe... 159 2e-37
gi|84318516|ref|ZP_00966939.1| COG1177: ABC-type spermidine... 159 2e-37
gi|145641349|ref|ZP_01796928.1| spermidine/putrescine ABC t... 159 2e-37
gi|55823440|ref|YP_141881.1| spermidine/putrescine ABC tran... 159 2e-37
gi|92089100|ref|ZP_01274053.1| Binding-protein-dependent tr... 159 2e-37
gi|157083695|gb|ABV13373.1| hypothetical protein CKO_02250 ... 159 2e-37
gi|113476390|ref|YP_722451.1| binding-protein-dependent tra... 159 2e-37
gi|126196779|gb|EAZ60842.1| polyamine transport protein Pot... 159 2e-37
gi|145297281|ref|YP_001140122.1| ABC-type putrescine transp... 159 2e-37
gi|34499555|ref|NP_903770.1| polyamine transport protein Po... 159 2e-37
gi|42629364|ref|ZP_00154911.1| COG1177: ABC-type spermidine... 158 2e-37
gi|15595501|ref|NP_248995.1| polyamine transport protein Po... 158 2e-37
gi|17402701|gb|AAL38944.1|AF325835_3 PotC [Salmonella enter... 158 3e-37
gi|116628226|ref|YP_820845.1| spermidine/putrescine ABC tra... 158 3e-37
gi|21243203|ref|NP_642785.1| putrescine transport protein [... 158 3e-37
gi|119856283|ref|ZP_01637716.1| binding-protein-dependent t... 158 3e-37
gi|16273255|ref|NP_439496.1| spermidine/putrescine ABC tran... 158 3e-37
gi|148655781|ref|YP_001275986.1| Ornithine carbamoyltransfe... 158 3e-37
gi|49083176|gb|AAT50965.1| PA0304 [synthetic construct] 158 3e-37
gi|100063890|ref|ZP_01325363.1| hypothetical protein BpseP_... 158 3e-37
gi|46133426|ref|ZP_00203160.1| COG1177: ABC-type spermidine... 158 3e-37
gi|30062339|ref|NP_836510.1| putrescine transport protein; ... 158 4e-37
gi|53721501|ref|YP_110486.1| putrescine transport system pe... 158 4e-37
gi|94493660|ref|ZP_01300863.1| hypothetical protein Rgryl_0... 158 4e-37
gi|125717881|ref|YP_001035014.1| ABC transporter membrane-s... 158 4e-37
gi|23100611|ref|NP_694078.1| spermidine:putrescine ABC tran... 157 4e-37
gi|1172564|sp|P45169|POTC_HAEIN Spermidine/putrescine trans... 157 5e-37
gi|78060793|ref|YP_367368.1| ABC spermidine/putrescine tran... 157 5e-37
gi|144901287|emb|CAM78151.1| Polyamine ABC transporter, per... 157 5e-37
gi|117619602|ref|YP_858557.1| putrescine ABC transporter, p... 157 5e-37
gi|115360809|ref|YP_777946.1| binding-protein-dependent tra... 157 5e-37
gi|126667835|ref|ZP_01738801.1| polyamine ABC transporter, ... 157 5e-37
gi|104784197|ref|YP_610695.1| putrescine ABC transporter, p... 157 5e-37
gi|15800609|ref|NP_286623.1| putrescine transport protein; ... 157 5e-37
gi|75178339|ref|ZP_00698393.1| COG1177: ABC-type spermidine... 157 5e-37
gi|110804854|ref|YP_688374.1| putrescine transport protein ... 157 5e-37
gi|16128825|ref|NP_415378.1| putrescine transporter subunit... 157 6e-37
gi|146318461|ref|YP_001198173.1| ABC-type spermidine/putres... 157 6e-37
gi|17402713|gb|AAL38953.1|AF325838_3 PotC [Salmonella enter... 157 7e-37
gi|104773745|ref|YP_618725.1| Spermidine/putrescine ABC tra... 157 8e-37
gi|75195046|ref|ZP_00705116.1| COG1177: ABC-type spermidine... 157 8e-37
gi|77458345|ref|YP_347850.1| Binding-protein-dependent tran... 157 8e-37
gi|78048204|ref|YP_364379.1| putrescine ABC transporter per... 156 9e-37
gi|124527114|ref|ZP_01698951.1| binding-protein-dependent t... 156 1e-36
gi|70729705|ref|YP_259444.1| putrescine ABC transporter, pe... 156 1e-36
gi|85058906|ref|YP_454608.1| putrescine ABC transporter per... 156 1e-36
gi|19746055|ref|NP_607191.1| putative spermidine/putrescine... 156 1e-36
gi|81177098|ref|ZP_00875989.1| Binding-protein-dependent tr... 156 1e-36
gi|124521220|ref|ZP_01696202.1| binding-protein-dependent t... 156 1e-36
gi|83319667|ref|YP_424187.1| spermidine/putrescine ABC tran... 156 1e-36
gi|49082948|gb|AAT50874.1| PA0324 [synthetic construct] 156 1e-36
gi|115353097|ref|YP_774936.1| binding-protein-dependent tra... 156 1e-36
gi|126356390|ref|ZP_01713395.1| binding-protein-dependent t... 156 1e-36
gi|84363110|ref|ZP_00987711.1| COG1177: ABC-type spermidine... 156 1e-36
gi|118720411|ref|ZP_01572936.1| binding-protein-dependent t... 155 2e-36
gi|157075441|gb|ABV10124.1| spermidine/putrescine ABC trans... 155 2e-36
gi|16799873|ref|NP_470141.1| hypothetical protein lin0799 [... 155 2e-36
gi|74311401|ref|YP_309820.1| putrescine transport protein [... 155 2e-36
gi|115423327|emb|CAJ49861.1| putrescine ABC transporter, pe... 155 2e-36
gi|84324405|ref|ZP_00972463.1| COG1177: ABC-type spermidine... 155 2e-36
gi|15595521|ref|NP_249015.1| probable permease of ABC trans... 155 2e-36
gi|156742798|ref|YP_001432927.1| Ornithine carbamoyltransfe... 155 2e-36
gi|91787971|ref|YP_548923.1| binding-protein-dependent tran... 155 3e-36
gi|149011624|ref|ZP_01832820.1| spermidine/putrescine ABC t... 155 3e-36
gi|116872185|ref|YP_848966.1| spermidine/putrescine ABC tra... 155 3e-36
gi|134297176|ref|YP_001120911.1| binding-protein-dependent ... 154 3e-36
gi|21231775|ref|NP_637692.1| putrescine transport protein; ... 154 4e-36
gi|84318495|ref|ZP_00966918.1| COG1177: ABC-type spermidine... 154 4e-36
gi|50121378|ref|YP_050545.1| spermidine/putrescine ABC tran... 154 4e-36
gi|78063658|ref|YP_373566.1| ABC spermidine/putrescine tran... 154 5e-36
gi|116490695|ref|YP_810239.1| spermidine/putrescine ABC tra... 154 5e-36
gi|116054051|ref|YP_788494.1| putative permease of ABC tran... 154 5e-36
gi|94988577|ref|YP_596678.1| spermidine/putrescine transpor... 154 6e-36
gi|118700571|ref|ZP_01558639.1| binding-protein-dependent t... 154 6e-36
gi|84356054|ref|ZP_00980920.1| COG1177: ABC-type spermidine... 154 6e-36
gi|42560776|ref|NP_975227.1| Spermidine/putrescine ABC tran... 154 7e-36
gi|146305389|ref|YP_001185854.1| Ornithine carbamoyltransfe... 153 8e-36
gi|113476405|ref|YP_722466.1| binding-protein-dependent tra... 153 9e-36
gi|69245028|ref|ZP_00603186.1| Binding-protein-dependent tr... 153 9e-36
gi|15903287|ref|NP_358837.1| ABC transporter membrane-spann... 153 1e-35
gi|15901241|ref|NP_345845.1| spermidine/putrescine ABC tran... 153 1e-35
gi|148989508|ref|ZP_01820867.1| spermidine/putrescine ABC t... 153 1e-35
gi|83645025|ref|YP_433460.1| ABC-type spermidine/putrescine... 153 1e-35
gi|153812244|ref|ZP_01964912.1| hypothetical protein RUMOBE... 152 1e-35
gi|52424865|ref|YP_088002.1| spermidine/putrescine ABC tran... 152 2e-35
gi|34497414|ref|NP_901629.1| putrescine transport system pe... 152 2e-35
gi|106885640|ref|ZP_01352997.1| Binding-protein-dependent t... 152 2e-35
gi|148652870|ref|YP_001279963.1| Ornithine carbamoyltransfe... 152 3e-35
gi|118047596|ref|ZP_01516229.1| binding-protein-dependent t... 151 4e-35
gi|121607812|ref|YP_995619.1| binding-protein-dependent tra... 151 4e-35
gi|110347057|ref|YP_665875.1| binding-protein-dependent tra... 150 5e-35
gi|53719192|ref|YP_108178.1| putrescine transport system pe... 150 8e-35
gi|15673147|ref|NP_267321.1| spermidine/putrescine ABC tran... 150 9e-35
gi|116617326|ref|YP_817697.1| spermidine/putrescine ABC tra... 150 1e-34
gi|91783858|ref|YP_559064.1| ABC polyamine transporter, inn... 149 1e-34
gi|84357814|ref|ZP_00982622.1| COG1177: ABC-type spermidine... 149 1e-34
gi|118711999|ref|ZP_01564571.1| binding-protein-dependent t... 149 1e-34
gi|13194616|gb|AAK15491.1|AF323694_6 PotI [Pseudomonas fluo... 149 1e-34
gi|108799531|ref|YP_639728.1| binding-protein-dependent tra... 149 2e-34
gi|89055564|ref|YP_511015.1| binding-protein-dependent tran... 149 2e-34
gi|116512020|ref|YP_809236.1| spermidine/putrescine ABC tra... 149 2e-34
gi|83950221|ref|ZP_00958954.1| spermidine/putrescine ABC tr... 149 2e-34
gi|121605751|ref|YP_983080.1| binding-protein-dependent tra... 149 2e-34
gi|78066516|ref|YP_369285.1| ABC spermidine/putrescine tran... 149 2e-34
gi|150019746|ref|YP_001312000.1| Ornithine carbamoyltransfe... 149 2e-34
gi|118471096|ref|YP_887589.1| polyamine ABC transporter int... 149 2e-34
gi|29377134|ref|NP_816288.1| spermidine/putrescine ABC tran... 148 3e-34
gi|83720931|ref|YP_442800.1| putrescine ABC transporter, pe... 148 3e-34
gi|134295795|ref|YP_001119530.1| binding-protein-dependent ... 148 3e-34
gi|15602127|ref|NP_245199.1| spermidine/putrescine ABC tran... 148 3e-34
gi|115351724|ref|YP_773563.1| binding-protein-dependent tra... 148 3e-34
gi|125624146|ref|YP_001032629.1| Spermidine/putrescine ABC ... 148 3e-34
gi|116621487|ref|YP_823643.1| binding-protein-dependent tra... 148 3e-34
gi|113461302|ref|YP_719371.1| spermidine/putrescine transpo... 148 4e-34
gi|118718501|ref|ZP_01571034.1| binding-protein-dependent t... 148 4e-34
gi|126649833|ref|ZP_01722069.1| spermidine:putrescine ABC t... 147 5e-34
gi|118032710|ref|ZP_01504158.1| binding-protein-dependent t... 147 5e-34
gi|81428972|ref|YP_395972.1| Spermidine/putrescine ABC tran... 147 6e-34
gi|153010129|ref|YP_001371343.1| Ornithine carbamoyltransfe... 147 6e-34
gi|84624273|ref|YP_451645.1| putrescine transport protein [... 147 6e-34
gi|84361890|ref|ZP_00986530.1| COG1177: ABC-type spermidine... 147 9e-34
gi|56419260|ref|YP_146578.1| spermidine/putrescine ABC tran... 147 9e-34
gi|42522937|ref|NP_968317.1| spermidine/putrescine transpor... 147 9e-34
gi|22537267|ref|NP_688118.1| spermidine/putrescine ABC tran... 146 1e-33
gi|118037850|ref|ZP_01509255.1| binding-protein-dependent t... 146 1e-33
gi|77405842|ref|ZP_00782925.1| spermidine/putrescine ABC tr... 146 1e-33
gi|77408692|ref|ZP_00785424.1| spermidine/putrescine ABC tr... 146 1e-33
gi|58582398|ref|YP_201414.1| putrescine transport protein; ... 146 1e-33
gi|68054130|ref|ZP_00538294.1| Binding-protein-dependent tr... 146 1e-33
gi|90961099|ref|YP_535015.1| Spermidine/putrescine transpor... 145 2e-33
gi|76258243|ref|ZP_00765899.1| Binding-protein-dependent tr... 145 2e-33
gi|110681252|ref|YP_684259.1| putrescine transport system, ... 145 2e-33
gi|91223713|ref|ZP_01258977.1| spermidine/putrescine ABC tr... 145 3e-33
gi|28377238|ref|NP_784130.1| spermidine/putrescine ABC tran... 145 3e-33
gi|24379417|ref|NP_721372.1| putative spermidine/putrescine... 144 4e-33
gi|70732491|ref|YP_262254.1| probable ABC transporter perme... 144 4e-33
gi|89097425|ref|ZP_01170314.1| spermidine/putrescine ABC tr... 144 4e-33
gi|85057373|ref|YP_456289.1| ABC-type spermidine/putrescine... 144 4e-33
gi|58337031|ref|YP_193616.1| spermidine and putrescine ABC ... 144 5e-33
gi|152988371|ref|YP_001345683.1| probable permease of ABC t... 144 5e-33
gi|39939147|ref|NP_950913.1| ABC-type spermidine/putrescine... 143 8e-33
gi|138894299|ref|YP_001124752.1| Spermidine/putrescine ABC ... 143 8e-33
gi|114764489|ref|ZP_01443714.1| probable permease of ABC tr... 143 9e-33
gi|146309014|ref|YP_001189479.1| binding-protein-dependent ... 143 1e-32
gi|72160687|ref|YP_288344.1| polyamine ABC-transporter, inn... 142 2e-32
gi|40557586|gb|AAR88087.1| PotC [Sweet potato little leaf p... 142 2e-32
gi|146281133|ref|YP_001171286.1| probable permease of ABC t... 142 2e-32
gi|49082816|gb|AAT50808.1| PA0204 [synthetic construct] 142 2e-32
gi|71910641|ref|YP_282191.1| spermidine/putrescine transpor... 142 2e-32
gi|15595401|ref|NP_248895.1| probable permease of ABC trans... 142 3e-32
gi|84318403|ref|ZP_00966827.1| COG1177: ABC-type spermidine... 142 3e-32
gi|118592241|ref|ZP_01549634.1| spermidine/putrescine ABC t... 141 4e-32
gi|15924091|ref|NP_371625.1| spermidine/putrescine ABC tran... 141 4e-32
gi|55981207|ref|YP_144504.1| spermidine/putrescine ABC tran... 141 4e-32
gi|46199178|ref|YP_004845.1| spermidine/putrescine transpor... 141 5e-32
gi|57866621|ref|YP_188272.1| spermidine/putrescine ABC tran... 140 6e-32
gi|111226168|ref|YP_716962.1| Polyamine ABC-transporter int... 140 7e-32
gi|82750710|ref|YP_416451.1| spermidine/putrescine ABC tran... 140 7e-32
gi|71280799|ref|YP_268765.1| spermidine/putrescine ABC tran... 140 8e-32
gi|27467717|ref|NP_764354.1| potC protein [Staphylococcus e... 139 1e-31
gi|13471690|ref|NP_103257.1| permease protein of polyamine ... 139 2e-31
gi|71278475|ref|YP_271318.1| putrescine ABC transporter, pe... 139 2e-31
gi|15675087|ref|NP_269261.1| putative spermidine/putrescine... 139 2e-31
gi|83951037|ref|ZP_00959770.1| spermidine/putrescine ABC tr... 139 2e-31
gi|94968571|ref|YP_590619.1| ABC spermidine/putrescine tran... 138 3e-31
gi|56696491|ref|YP_166848.1| spermidine/putrescine ABC tran... 137 5e-31
gi|77463581|ref|YP_353085.1| ABC spermidine/putrescine tran... 137 5e-31
gi|145223722|ref|YP_001134400.1| binding-protein-dependent ... 137 5e-31
gi|126438637|ref|YP_001057185.1| ABC-type spermidine/putres... 137 6e-31
gi|29346699|ref|NP_810202.1| putrescine transport system pe... 137 6e-31
gi|89899169|ref|YP_521640.1| binding-protein-dependent tran... 137 6e-31
gi|126462413|ref|YP_001043527.1| binding-protein-dependent ... 137 6e-31
gi|126740259|ref|ZP_01755948.1| probable permease of ABC tr... 137 7e-31
gi|84501734|ref|ZP_00999906.1| ABC putrescine transporter, ... 137 7e-31
gi|70726852|ref|YP_253766.1| putative spermidine/putrescine... 137 8e-31
gi|126360038|ref|ZP_01717027.1| binding-protein-dependent t... 137 8e-31
gi|120404364|ref|YP_954193.1| binding-protein-dependent tra... 137 9e-31
gi|153806123|ref|ZP_01958791.1| hypothetical protein BACCAC... 136 1e-30
gi|73662997|ref|YP_301778.1| ABC-type spermidine putrescine... 136 1e-30
gi|46156540|ref|ZP_00204730.1| COG1177: ABC-type spermidine... 135 2e-30
gi|119859307|ref|ZP_01640723.1| binding-protein-dependent t... 135 2e-30
gi|11499198|ref|NP_070435.1| spermidine/putrescine ABC tran... 135 2e-30
gi|53714013|ref|YP_100005.1| putrescine transport system pe... 135 2e-30
gi|150006050|ref|YP_001300794.1| putrescine transport syste... 135 3e-30
gi|146278207|ref|YP_001168366.1| binding-protein-dependent ... 135 3e-30
gi|13471902|ref|NP_103469.1| permease protein of spermidine... 135 3e-30
gi|156112482|gb|EDO14227.1| hypothetical protein BACOVA_000... 135 3e-30
gi|111115473|ref|YP_710091.1| spermidine/putrescine ABC tra... 135 4e-30
gi|49083648|gb|AAT51086.1| PA0606 [synthetic construct] 134 4e-30
gi|153012140|ref|YP_001373350.1| binding-protein-dependent ... 134 4e-30
gi|146277422|ref|YP_001167581.1| binding-protein-dependent ... 134 4e-30
gi|150008277|ref|YP_001303020.1| putrescine transport syste... 134 5e-30
gi|77461343|ref|YP_350850.1| Binding-protein-dependent tran... 134 5e-30
gi|15595803|ref|NP_249297.1| probable permease of ABC trans... 134 5e-30
gi|116054334|ref|YP_788779.1| putative permease of ABC tran... 134 6e-30
gi|92113321|ref|YP_573249.1| binding-protein-dependent tran... 134 8e-30
gi|37520971|ref|NP_924348.1| ABC transporter permease prote... 133 9e-30
gi|15594985|ref|NP_212774.1| spermidine/putrescine ABC tran... 133 9e-30
gi|77462956|ref|YP_352460.1| ABC putrescine transporter, in... 133 1e-29
gi|26987155|ref|NP_742580.1| polyamine ABC transporter, per... 132 1e-29
gi|126461830|ref|YP_001042944.1| binding-protein-dependent ... 132 2e-29
gi|17228829|ref|NP_485377.1| permease protein of ABC transp... 132 2e-29
gi|83593380|ref|YP_427132.1| Binding-protein-dependent tran... 132 2e-29
gi|148545700|ref|YP_001265802.1| binding-protein-dependent ... 132 2e-29
gi|13472554|ref|NP_104121.1| ABC transporter, permease [Mes... 131 3e-29
gi|149201973|ref|ZP_01878947.1| spermidine/putrescine ABC t... 131 3e-29
gi|117928488|ref|YP_873039.1| binding-protein-dependent tra... 131 4e-29
gi|152987634|ref|YP_001346145.1| probable permease of ABC t... 131 4e-29
gi|115359043|ref|YP_776181.1| binding-protein-dependent tra... 131 5e-29
gi|13473160|ref|NP_104727.1| spermidine/putrescine ABC tran... 130 6e-29
gi|154492772|ref|ZP_02032398.1| hypothetical protein PARMER... 130 1e-28
gi|87121198|ref|ZP_01077089.1| probable spermidine/putresci... 129 1e-28
gi|56420543|ref|YP_147861.1| polyamine ABC transporter (per... 129 2e-28
gi|28558943|ref|NP_788203.1| spermidine/putrescine ABC tran... 129 2e-28
gi|148259556|ref|YP_001233683.1| binding-protein-dependent ... 129 2e-28
gi|70732924|ref|YP_262695.1| probable ABC transporter perme... 129 2e-28
gi|85703646|ref|ZP_01034750.1| spermidine/putrescine ABC tr... 129 2e-28
gi|104779714|ref|YP_606212.1| polyamine ABC transporter, pe... 128 4e-28
gi|126731474|ref|ZP_01747280.1| spermidine/putrescine ABC t... 128 4e-28
gi|126739479|ref|ZP_01755172.1| ABC spermidine/putrescine t... 128 4e-28
gi|110798708|ref|YP_695922.1| ABC transporter, permease pro... 127 5e-28
gi|110677682|ref|YP_680689.1| spermidine-ABC transporter, p... 127 5e-28
gi|85705281|ref|ZP_01036380.1| ABC permidine/putrescine tra... 127 6e-28
gi|69933453|ref|ZP_00628655.1| Binding-protein-dependent tr... 127 6e-28
gi|76817648|ref|YP_336737.1| spermidine/putrescine ABC tran... 127 6e-28
gi|77465051|ref|YP_354554.1| ABC permidine/putrescine trans... 127 7e-28
gi|149916101|ref|ZP_01904623.1| spermidine/putrescine ABC t... 127 7e-28
gi|149203214|ref|ZP_01880184.1| ABC permidine/putrescine tr... 127 7e-28
gi|83950389|ref|ZP_00959122.1| ABC spermidine/putrescine tr... 127 8e-28
gi|114764597|ref|ZP_01443801.1| probable spermidineputresci... 127 8e-28
gi|22125291|ref|NP_668714.1| permease of ABC transporter [Y... 126 1e-27
gi|118030272|ref|ZP_01501730.1| binding-protein-dependent t... 126 1e-27
gi|153011752|ref|YP_001372966.1| binding-protein-dependent ... 125 2e-27
gi|56696880|ref|YP_167242.1| spermidine/putrescine ABC tran... 125 2e-27
gi|18310253|ref|NP_562187.1| probable ABC transporter [Clos... 125 2e-27
gi|16123036|ref|NP_406349.1| putative ABC transporter perme... 125 2e-27
gi|83716817|ref|YP_438287.1| ABC transporter, permease prot... 125 3e-27
gi|119719820|ref|YP_920315.1| binding-protein-dependent tra... 125 4e-27
gi|126445385|ref|YP_001063492.1| putative polyamine ABC tra... 124 4e-27
gi|153948426|ref|YP_001400202.1| spermidine/putrescine ABC ... 124 5e-27
gi|124879780|gb|EAY67136.1| hypothetical protein BCPG_05545... 124 5e-27
gi|83717787|ref|YP_438844.1| polyamine ABC transporter, per... 124 6e-27
gi|114764736|ref|ZP_01443919.1| spermidine/putrescine ABC t... 124 6e-27
gi|149202908|ref|ZP_01879879.1| spermidine/putrescine ABC t... 124 7e-27
gi|27381758|ref|NP_773287.1| ABC transporter permease prote... 123 9e-27
gi|91777207|ref|YP_552415.1| ABC spermidine/putrescine fami... 123 9e-27
gi|84351958|ref|ZP_00976934.1| COG1177: ABC-type spermidine... 123 1e-26
gi|77457272|ref|YP_346777.1| Binding-protein-dependent tran... 123 1e-26
gi|51598895|ref|YP_073083.1| spermidine/putrescine ABC tran... 123 1e-26
gi|50120985|ref|YP_050152.1| putative transport system, per... 123 1e-26
gi|91790212|ref|YP_551164.1| binding-protein-dependent tran... 122 2e-26
gi|53722756|ref|YP_111741.1| ABC transport system, membrane... 122 2e-26
gi|91790250|ref|YP_551202.1| binding-protein-dependent tran... 122 2e-26
gi|118473215|ref|YP_889021.1| ABC transporter permease prot... 122 2e-26
gi|118029650|ref|ZP_01501110.1| binding-protein-dependent t... 122 2e-26
gi|85705970|ref|ZP_01037066.1| spermidine/putrescine ABC tr... 122 2e-26
gi|89899695|ref|YP_522166.1| binding-protein-dependent tran... 122 2e-26
gi|17938714|ref|NP_535502.1| ABC transporter, membrane span... 122 3e-26
gi|118036573|ref|ZP_01507980.1| binding-protein-dependent t... 121 3e-26
gi|121607749|ref|YP_995556.1| binding-protein-dependent tra... 121 4e-26
gi|15965999|ref|NP_386352.1| PUTATIVE PERMEASE ABC TRANSPOR... 121 4e-26
gi|152998300|ref|YP_001343135.1| binding-protein-dependent ... 121 4e-26
gi|156860740|gb|EDO54171.1| hypothetical protein BACUNI_021... 121 5e-26
gi|16119355|ref|NP_396061.1| hypothetical protein AGR_pAT_1... 121 5e-26
gi|84517196|ref|ZP_01004551.1| ABC transporter permease pro... 120 6e-26
>gi|19705104|ref|NP_602599.1| Spermidine/putrescine transport system permease protein potC
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19713031|gb|AAL93898.1| Spermidine/putrescine transport system permease protein potC
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 264
Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats.
Identities = 263/264 (99%), Positives = 264/264 (100%)
Query: 1 VKIMSNNLNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGMVWNGFSLRWYKELFKHS 60
+KIMSNNLNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGMVWNGFSLRWYKELFKHS
Sbjct: 1 MKIMSNNLNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGMVWNGFSLRWYKELFKHS 60
Query: 61 NNIWKAFYYSIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGV 120
NNIWKAFYYSIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGV
Sbjct: 61 NNIWKAFYYSIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGV 120
Query: 121 SLLIMFATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTL 180
SLLIMFATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTL
Sbjct: 121 SLLIMFATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTL 180
Query: 181 TKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL 240
TKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL
Sbjct: 181 TKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL 240
Query: 241 SVILIVISILLTLSTKKLQKNFIK 264
SVILIVISILLTLSTKKLQKNFIK
Sbjct: 241 SVILIVISILLTLSTKKLQKNFIK 264
>gi|34762706|ref|ZP_00143696.1| Spermidine/putrescine transport system permease protein potC
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27887605|gb|EAA24684.1| Spermidine/putrescine transport system permease protein potC
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 261
Score = 399 bits (1026), Expect = e-110, Method: Composition-based stats.
Identities = 248/261 (95%), Positives = 258/261 (98%)
Query: 4 MSNNLNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGMVWNGFSLRWYKELFKHSNNI 63
MSN L++RKTSFIIFILAM+FFYLPLIVL+IYSFNDGKGM+WNGFSLRWYKELFKHS+NI
Sbjct: 1 MSNKLDKRKTSFIIFILAMVFFYLPLIVLIIYSFNDGKGMIWNGFSLRWYKELFKHSSNI 60
Query: 64 WKAFYYSIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLL 123
WKAFYYSIFIALISS VST+IGTFGAIALKWFDFKGKKYLKN+SVLPLVVPDIIIGVSLL
Sbjct: 61 WKAFYYSIFIALISSFVSTVIGTFGAIALKWFDFKGKKYLKNLSVLPLVVPDIIIGVSLL 120
Query: 124 IMFATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKV 183
IMFATLKF+LGI TIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKV
Sbjct: 121 IMFATLKFRLGITTIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKV 180
Query: 184 IIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVI 243
IIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVI
Sbjct: 181 IIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVI 240
Query: 244 LIVISILLTLSTKKLQKNFIK 264
LIVISILLTLSTKKLQKNF+K
Sbjct: 241 LIVISILLTLSTKKLQKNFLK 261
>gi|148323759|gb|EDK89009.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter membrane protein [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 264
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 253/264 (95%), Positives = 258/264 (97%)
Query: 1 VKIMSNNLNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGMVWNGFSLRWYKELFKHS 60
+KIMSN L+RRKTS IIFI MIFFYLPLIVLVIYSFNDGKGMVWNGFSLRWYKELFKHS
Sbjct: 1 MKIMSNKLDRRKTSLIIFIFTMIFFYLPLIVLVIYSFNDGKGMVWNGFSLRWYKELFKHS 60
Query: 61 NNIWKAFYYSIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGV 120
+NIWKAFYYSIFIALISS VST+IGTFGAIALKWFDFKGKKYLKN+SVLPLVVPDIIIGV
Sbjct: 61 SNIWKAFYYSIFIALISSFVSTVIGTFGAIALKWFDFKGKKYLKNLSVLPLVVPDIIIGV 120
Query: 121 SLLIMFATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTL 180
SLLIMFATLKFKLGI TIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTL
Sbjct: 121 SLLIMFATLKFKLGITTIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTL 180
Query: 181 TKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL 240
TKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL
Sbjct: 181 TKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL 240
Query: 241 SVILIVISILLTLSTKKLQKNFIK 264
SVILIVISILLTLSTKKLQKNFIK
Sbjct: 241 SVILIVISILLTLSTKKLQKNFIK 264
>gi|15639641|ref|NP_219091.1| spermidine/putrescine ABC transporter, permease protein (potC)
[Treponema pallidum subsp. pallidum str. Nichols]
gi|3322955|gb|AAC65629.1| spermidine/putrescine ABC transporter, permease protein (potC)
[Treponema pallidum subsp. pallidum str. Nichols]
Length = 272
Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats.
Identities = 118/236 (50%), Positives = 180/236 (76%), Gaps = 2/236 (0%)
Query: 12 KTSFIIFILAMI--FFYLPLIVLVIYSFNDGKGMVWNGFSLRWYKELFKHSNNIWKAFYY 69
+ SF +LA + F +LPL V+ ++SFN K ++W GFSLRWY ELF +S +W +F
Sbjct: 16 RCSFSAVLLAAVVSFLFLPLAVIALFSFNKDKSLIWTGFSLRWYTELFFYSEKLWSSFLN 75
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
S+ IA +S+LV+TI+GT AIA++W+ F G+ Y + MS+LP+++P++I G+++L+ F+ +
Sbjct: 76 SVLIASVSALVATIVGTAAAIAIRWYRFSGRLYAQVMSLLPMLLPEVITGMAMLVFFSLV 135
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
+ LG +I AH TF +P+VL ++L+R+D FD S++EAA DLGA Q L K++IP ++
Sbjct: 136 RLPLGRASIITAHITFCLPFVLLLILTRIDTFDLSLIEAAQDLGANEWQALGKIVIPAIM 195
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
P I+S FL+++TLS +DFVITFFV+GPGS+TLPL ++SMIR GVSP++NALS+I++
Sbjct: 196 PGILSGFLLSVTLSLEDFVITFFVAGPGSTTLPLYVFSMIRYGVSPIINALSLIMM 251
>gi|148270534|ref|YP_001244994.1| Ornithine carbamoyltransferase [Thermotoga petrophila RKU-1]
gi|147736078|gb|ABQ47418.1| Ornithine carbamoyltransferase [Thermotoga petrophila RKU-1]
Length = 256
Score = 224 bits (570), Expect = 6e-57, Method: Composition-based stats.
Identities = 132/242 (54%), Positives = 179/242 (73%)
Query: 17 IFILAMIFFYLPLIVLVIYSFNDGKGMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALI 76
I IL M+FFYLPL ++V+ SFN K VW+GF+L+WY ELF ++W AF S+ +A++
Sbjct: 10 IVILTMVFFYLPLFIVVLMSFNSAKSPVWSGFTLKWYLELFTREYSVWHAFRNSLIVAIV 69
Query: 77 SSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGII 136
SS VST IGT AI L W + + + ++ LP VVPD+IIG+SLL++F+ K +LG+
Sbjct: 70 SSTVSTAIGTLTAIELFWRKSRLENSIWFLTYLPFVVPDVIIGISLLLLFSMFKVQLGLF 129
Query: 137 TIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAF 196
TI +AH TF+IPY + IV SRL +FD SI+EAAYDLG+T+ Q +VIIP L+P I++AF
Sbjct: 130 TITLAHITFSIPYTMMIVHSRLQDFDRSIIEAAYDLGSTDFQVFYRVIIPNLVPGIVAAF 189
Query: 197 LMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTK 256
L+A TLS DDFVITFFV+GPGS+TLP++IYSMIR G+SP VNA+S +I +IL+ +
Sbjct: 190 LLAFTLSIDDFVITFFVAGPGSTTLPIQIYSMIRFGISPTVNAISTFMIAGTILIGFVLR 249
Query: 257 KL 258
K
Sbjct: 250 KF 251
>gi|15644130|ref|NP_229179.1| spermidine/putrescine ABC transporter, permease protein [Thermotoga
maritima MSB8]
gi|4981939|gb|AAD36448.1|AE001791_10 spermidine/putrescine ABC transporter, permease protein [Thermotoga
maritima MSB8]
Length = 256
Score = 223 bits (567), Expect = 1e-56, Method: Composition-based stats.
Identities = 131/242 (54%), Positives = 179/242 (73%)
Query: 17 IFILAMIFFYLPLIVLVIYSFNDGKGMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALI 76
I IL M+FFYLPL ++V+ SFN K VW+GF+L+WY ELF ++W AF S+ +A++
Sbjct: 10 IVILTMVFFYLPLFIVVLMSFNSAKSPVWSGFTLKWYLELFTREYSVWHAFRNSLIVAIV 69
Query: 77 SSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGII 136
SS VST IGT AI L W + + + ++ LP VVPD+IIG+SLL++F+ K +LG+
Sbjct: 70 SSTVSTAIGTLTAIELFWKKSRLENSIWFLTYLPFVVPDVIIGISLLLLFSMFKVQLGLF 129
Query: 137 TIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAF 196
TI +AH TF+IPY + IV SRL +FD SI+EAAYDLG+T+ Q +VIIP L+P I++AF
Sbjct: 130 TITLAHITFSIPYTMMIVHSRLQDFDKSIIEAAYDLGSTDFQVFYRVIIPNLVPGIVAAF 189
Query: 197 LMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTK 256
L+A TLS DDFVITFFV+GPGS+TLP++IYSMIR G+SP VNA+S +I +IL+ +
Sbjct: 190 LLAFTLSIDDFVITFFVAGPGSTTLPIQIYSMIRFGISPTVNAISTFMIAGTILIGFVLR 249
Query: 257 KL 258
+
Sbjct: 250 RF 251
>gi|154249069|ref|YP_001409894.1| Ornithine carbamoyltransferase [Fervidobacterium nodosum Rt17-B1]
gi|154153005|gb|ABS60237.1| Ornithine carbamoyltransferase [Fervidobacterium nodosum Rt17-B1]
Length = 261
Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats.
Identities = 127/238 (53%), Positives = 181/238 (76%)
Query: 26 YLPLIVLVIYSFNDGKGMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIG 85
Y+P+ +LVI+SFN K W GFSL+WY +LF S +IW+ F+ S+ + + +SL+S+IIG
Sbjct: 24 YIPIFILVIFSFNSSKSPEWTGFSLKWYYQLFTSSRHIWRTFFNSLIVGISASLISSIIG 83
Query: 86 TFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTF 145
T GAI++ K KK L + +P V+PDIIIGVSLL+ F+ +K +L + TIF+AH TF
Sbjct: 84 TLGAISMYLGSKKFKKILWTTTYIPFVIPDIIIGVSLLVFFSAIKLQLSLFTIFLAHVTF 143
Query: 146 NIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFD 205
+IPY + I+L+RL++FD S++EAAYDLGAT+ L KVIIP+ LP I++AF MA TLS D
Sbjct: 144 SIPYTMMIILTRLEDFDKSVIEAAYDLGATSFVALRKVIIPIALPGIVAAFFMAFTLSID 203
Query: 206 DFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNFI 263
DFVITFFV+GPGS+TLPL+I+SM+R G+SPV+NA+S +L+V +I +++ +K + I
Sbjct: 204 DFVITFFVAGPGSTTLPLQIFSMVRFGISPVINAISTLLLVGTIFISIFLRKYVRYII 261
>gi|148378565|ref|YP_001253106.1| spermidine/putrescine transport system permease protein
[Clostridium botulinum A str. ATCC 3502]
gi|153932323|ref|YP_001382953.1| putative spermidine/putrescine ABC transporter, permease
protein/spermidine/putrescine-binding protein
[Clostridium botulinum A str. ATCC 19397]
gi|153936910|ref|YP_001386501.1| putative spermidine/putrescine ABC transporter, permease
protein/spermidine/putrescine-binding protein
[Clostridium botulinum A str. Hall]
gi|148288049|emb|CAL82117.1| spermidine/putrescine transport system permease protein
[Clostridium botulinum A str. ATCC 3502]
gi|152928367|gb|ABS33867.1| putative spermidine/putrescine ABC transporter, permease
protein/spermidine/putrescine-binding protein
[Clostridium botulinum A str. ATCC 19397]
gi|152932824|gb|ABS38323.1| putative spermidine/putrescine ABC transporter, permease
protein/spermidine/putrescine-binding protein
[Clostridium botulinum A str. Hall]
Length = 613
Score = 213 bits (542), Expect = 9e-54, Method: Composition-based stats.
Identities = 113/257 (43%), Positives = 175/257 (68%), Gaps = 2/257 (0%)
Query: 9 NRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAF 67
N+ S I L +F YLP+ VLV++SFN K + GF+L WYK L + I +A
Sbjct: 4 NKGLLSKIYATLVYVFLYLPIFVLVVFSFNKSKLNATFTGFTLDWYKNLINNVQ-ILEAL 62
Query: 68 YYSIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFA 127
S+ IA IS+ + IIGT AI + + FKGK+ ++ + +P+V+P+I++G+S+L F+
Sbjct: 63 KNSLIIAFISTFFAVIIGTLAAIGMYRYKFKGKRAMEGLLYIPVVIPEIVMGISMLAFFS 122
Query: 128 TLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPM 187
+L G+IT+ +AH TF I YV+ +V +RLD FD ++ EAA DLGAT QTLTKV +P+
Sbjct: 123 SLNLPAGLITLILAHITFCISYVIIVVRARLDGFDAALEEAAQDLGATPWQTLTKVTLPV 182
Query: 188 LLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
+ P IIS L+A TLS DD +I+FF +GP S+TLPL+I+SM++ GV+P +NALS +++V
Sbjct: 183 ISPGIISGALLAFTLSLDDVIISFFAAGPDSNTLPLKIFSMVKFGVTPEINALSTVMMVF 242
Query: 248 SILLTLSTKKLQKNFIK 264
++ + + + +++N +K
Sbjct: 243 TLSMVVIAEGIRRNMLK 259
>gi|153939862|ref|YP_001389927.1| putative spermidine/putrescine ABC transporter, permease
protein/spermidine/putrescine-binding protein
[Clostridium botulinum F str. Langeland]
gi|152935758|gb|ABS41256.1| putative spermidine/putrescine ABC transporter, permease
protein/spermidine/putrescine-binding protein
[Clostridium botulinum F str. Langeland]
Length = 613
Score = 213 bits (541), Expect = 1e-53, Method: Composition-based stats.
Identities = 113/257 (43%), Positives = 175/257 (68%), Gaps = 2/257 (0%)
Query: 9 NRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAF 67
N+ S I L +F YLP+ VLV++SFN K + GF+L WYK L + I +A
Sbjct: 4 NKGLLSKIYATLVYVFLYLPIFVLVVFSFNKSKLNATFTGFTLDWYKNLINNVQ-ILEAL 62
Query: 68 YYSIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFA 127
S+ IA IS+ + IIGT AI + + FKGK+ ++ + +P+V+P+I++G+S+L F+
Sbjct: 63 KNSLIIAFISTFFAVIIGTLAAIGMYRYKFKGKRAMEGLLYIPVVIPEIVMGISMLAFFS 122
Query: 128 TLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPM 187
+L G+IT+ +AH TF I YV+ +V +RLD FD ++ EAA DLGAT QTLTKV +P+
Sbjct: 123 SLNLPAGLITLILAHITFCISYVIIVVRARLDGFDAALEEAAQDLGATPWQTLTKVTLPV 182
Query: 188 LLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
+ P IIS L+A TLS DD +I+FF +GP S+TLPL+I+SM++ GV+P +NALS +++V
Sbjct: 183 ISPGIISGALLAFTLSLDDVIISFFAAGPDSNTLPLKIFSMVKFGVTPEINALSTVMMVF 242
Query: 248 SILLTLSTKKLQKNFIK 264
++ + + + +++N +K
Sbjct: 243 TLSMVVIAEGIRRNMLK 259
>gi|108805700|ref|YP_645637.1| binding-protein-dependent transport systems inner membrane
component [Rubrobacter xylanophilus DSM 9941]
gi|108766943|gb|ABG05825.1| binding-protein-dependent transport systems inner membrane
component [Rubrobacter xylanophilus DSM 9941]
Length = 267
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 114/236 (48%), Positives = 162/236 (68%), Gaps = 2/236 (0%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKG-MVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L +F Y P+ VLV +SFN+ + VW GFSLRWY EL + ++ AFY S+ + + ++
Sbjct: 23 LVYLFLYAPIAVLVFFSFNESRSTQVWGGFSLRWYGELLR-DRSVLDAFYNSLVVGVTAT 81
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
+ST+IGT A+AL +F+GK ++ V+P+I++GVSLL F ++F LG+ TI
Sbjct: 82 AISTVIGTLAALALARHNFRGKSLADSVVYAATVMPEIVVGVSLLAFFVAIQFALGLTTI 141
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
IAH F I +V +V +RL D S+ EAA DLGA QT +V +PM+LP +++ L+
Sbjct: 142 IIAHVAFTISFVTIVVRARLSGMDRSVEEAAMDLGANPVQTFLRVTLPMILPGVMAGALL 201
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLS 254
A TLSFDDFVITFFVSG GSSTLPL+IYSMI+ GVSPV+NALS +++ +++ L+
Sbjct: 202 AFTLSFDDFVITFFVSGVGSSTLPLKIYSMIKFGVSPVINALSTVVLAATLVFILA 257
>gi|150020464|ref|YP_001305818.1| Ornithine carbamoyltransferase [Thermosipho melanesiensis BI429]
gi|149792985|gb|ABR30433.1| Ornithine carbamoyltransferase [Thermosipho melanesiensis BI429]
Length = 256
Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats.
Identities = 127/226 (56%), Positives = 175/226 (77%)
Query: 32 LVIYSFNDGKGMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIA 91
+V++SFN+ K VW GFS WYKELF +S +IW AF+ SI +A+ SS+++T++GT AI
Sbjct: 25 VVLFSFNNSKSPVWVGFSFHWYKELFFNSFDIWNAFFNSIIVAVSSSVIATVLGTLAAIG 84
Query: 92 LKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVL 151
L FK KKY+ +S LPL++PDIIIG+SLLI F +K KL + TIFIAHTTF++PY +
Sbjct: 85 LYLERFKYKKYIWIISYLPLIIPDIIIGISLLIFFVMIKTKLSLFTIFIAHTTFSLPYAM 144
Query: 152 FIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITF 211
IV SRL +FD SI++A+YDLGA+ +TL +VI+P P I++AF M+LTLS DDFVITF
Sbjct: 145 MIVFSRLQDFDKSIIDASYDLGASKLETLLRVIVPASFPGILAAFFMSLTLSIDDFVITF 204
Query: 212 FVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKK 257
FV+GPGS+TLPL+IYSMIR G++P +NA+S I++V +I ++ +K
Sbjct: 205 FVAGPGSTTLPLKIYSMIRFGITPTINAISTIMLVGTIGISFLMRK 250
>gi|16127365|ref|NP_421929.1| spermidine/putrescine ABC transporter, permease protein
[Caulobacter crescentus CB15]
gi|13424799|gb|AAK25097.1| spermidine/putrescine ABC transporter, permease protein
[Caulobacter crescentus CB15]
Length = 318
Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats.
Identities = 108/247 (43%), Positives = 163/247 (65%), Gaps = 9/247 (3%)
Query: 23 IFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVS 81
IF Y PLI L+ +SFND K +VW GF+L++Y++LF +S + +AF S+ IA S+++S
Sbjct: 60 IFLYAPLIALMAFSFNDSKRNIVWKGFTLKYYEKLFNNSE-LLEAFGNSLTIAAASTVIS 118
Query: 82 TIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFAT-------LKFKLG 134
+G A+AL F F GK + LP+VVP+I +GV++L+ FA + + L
Sbjct: 119 LFLGAAVALALWRFRFPGKTAVDGAMALPIVVPEICMGVAMLVFFAKVLPWPQGMPWPLN 178
Query: 135 IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIIS 194
+ I IAH +F+ P+V +V +R+ F+ + EAA DLGA +T+ VI+P + P++I+
Sbjct: 179 LGAIIIAHVSFSFPFVAVVVRARMASFNREMEEAARDLGAGEFRTIKDVILPHMAPSLIA 238
Query: 195 AFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLS 254
L+A TLS DDFVITFF +GP + T P+++YSM+R V+P VNA S +LIV+++LLT +
Sbjct: 239 GALLAFTLSLDDFVITFFTAGPDTVTFPVKVYSMVRFSVTPEVNAASTVLIVLTVLLTAA 298
Query: 255 TKKLQKN 261
KLQ N
Sbjct: 299 ALKLQGN 305
>gi|152974813|ref|YP_001374330.1| Ornithine carbamoyltransferase [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152023565|gb|ABS21335.1| Ornithine carbamoyltransferase [Bacillus cereus subsp. cytotoxis
NVH 391-98]
Length = 266
Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats.
Identities = 113/238 (47%), Positives = 166/238 (69%), Gaps = 2/238 (0%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L ++F Y P++VL++YSFND + W GF+ WY +LF+ + I A SI IALI++
Sbjct: 11 LILLFLYFPMMVLMVYSFNDSRINAEWQGFTFHWYTDLFQKQDVI-DALVNSITIALITT 69
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
V+T +G F A+AL + ++ + + + LP+++PDI++G+SLLI+F+ + +LG TI
Sbjct: 70 FVTTALGVFFAVALHRYKYRFEGAINGLVYLPILIPDILMGLSLLILFSQIGMELGQATI 129
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
IAH TF+I +V+ I+ +RL + + EAA DLGAT QT V +P + P IISA L+
Sbjct: 130 IIAHITFSISFVVVILAARLSSMGHDLEEAANDLGATPWQTFRHVTLPSIAPGIISAALL 189
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTK 256
TLS DDFVI+FFVSGPGS+TLPL IYSM++ GVSP +NALS ILIV+ + L ++++
Sbjct: 190 TFTLSIDDFVISFFVSGPGSTTLPLYIYSMVKRGVSPEINALSTILIVVIVGLMIASE 247
>gi|30019439|ref|NP_831070.1| Spermidine/putrescine transport system permease protein potC
[Bacillus cereus ATCC 14579]
gi|75760663|ref|ZP_00740690.1| Spermidine/putrescine transport system permease protein potC
[Bacillus thuringiensis serovar israelensis ATCC 35646]
gi|29894983|gb|AAP08271.1| Spermidine/putrescine transport system permease protein potC
[Bacillus cereus ATCC 14579]
gi|74491844|gb|EAO55033.1| Spermidine/putrescine transport system permease protein potC
[Bacillus thuringiensis serovar israelensis ATCC 35646]
Length = 266
Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 113/228 (49%), Positives = 160/228 (70%), Gaps = 2/228 (0%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L ++F Y P++VL++YSFND + W GF+ WY +LF+ + I AF SI IA+I++
Sbjct: 11 LILLFLYFPMMVLMVYSFNDSRINAEWEGFTFHWYTDLFQKQDVI-DAFVNSITIAVITT 69
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
+V+T++G F AIAL + ++ + + + LP+++PDI++G+SLLI+F+ L +LG TI
Sbjct: 70 IVTTVLGVFFAIALHRYKYRFEGAINGLVYLPILIPDILMGLSLLILFSQLGMELGQTTI 129
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
IAH TF+I +V+ I+ +RL + EAA DLGAT QT V P + P +ISA L+
Sbjct: 130 IIAHITFSISFVVVILAARLSSMGRDLEEAANDLGATPWQTFRYVTFPAIAPGVISAALL 189
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIV 246
TLS DDFVI+FFVSGPGS+TLPL IYSM++ GVSP +NALS ILIV
Sbjct: 190 TFTLSIDDFVISFFVSGPGSTTLPLYIYSMVKRGVSPEINALSTILIV 237
>gi|17986697|ref|NP_539331.1| PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN POTI [Brucella
melitensis 16M]
gi|62290489|ref|YP_222282.1| spermidine/putrescine ABC transporter, permease protein [Brucella
abortus biovar 1 str. 9-941]
gi|82700412|ref|YP_414986.1| Binding-protein-dependent transport systems inner membrane
component [Brucella melitensis biovar Abortus 2308]
gi|17982319|gb|AAL51595.1| PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN POTI [Brucella
melitensis 16M]
gi|62196621|gb|AAX74921.1| spermidine/putrescine ABC transporter, permease protein [Brucella
abortus biovar 1 str. 9-941]
gi|82616513|emb|CAJ11580.1| Binding-protein-dependent transport systems inner membrane
component [Brucella melitensis biovar Abortus 2308]
Length = 273
Score = 191 bits (484), Expect = 5e-47, Method: Composition-based stats.
Identities = 109/246 (44%), Positives = 166/246 (67%), Gaps = 5/246 (2%)
Query: 4 MSNNLNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNN 62
M NN +R + + L F YLP+++LVIYSFN+ + + VW GFS +WY ELF+ +
Sbjct: 1 MQNNWSR--FNIVSVALGFAFLYLPIVLLVIYSFNESRLVTVWAGFSTKWYGELFR-NQA 57
Query: 63 IWKAFYYSIFIALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVS 121
+ A + +I + L+S+ ++T++GT A+AL ++ F+G+ M PLV+PD+I G+S
Sbjct: 58 LMHAAWVTIRVGLLSATIATVLGTLAALALTRYTRFRGRILFSGMVYAPLVMPDVITGLS 117
Query: 122 LLIMFATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLT 181
LL++F + F G T+ +AH TF++ +V +V SRL FD S+ EAA DLGA T
Sbjct: 118 LLLLFVAMNFDRGFWTVTLAHITFSMCFVAVVVQSRLVSFDRSLEEAAMDLGAPPVTTFM 177
Query: 182 KVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALS 241
KV +P++LPA++S +++A TLS DD VI F SGPG++TLP++IYS +RLGV+P +NA+
Sbjct: 178 KVTLPVILPAVVSGWMLAFTLSLDDLVIASFTSGPGATTLPMKIYSQVRLGVTPEINAVC 237
Query: 242 VILIVI 247
ILI +
Sbjct: 238 TILIAL 243
>gi|23502472|ref|NP_698599.1| spermidine/putrescine ABC transporter, permease protein, putative
[Brucella suis 1330]
gi|23348464|gb|AAN30514.1| spermidine/putrescine ABC transporter, permease protein, putative
[Brucella suis 1330]
Length = 273
Score = 191 bits (484), Expect = 5e-47, Method: Composition-based stats.
Identities = 109/246 (44%), Positives = 166/246 (67%), Gaps = 5/246 (2%)
Query: 4 MSNNLNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNN 62
M NN +R + + L F YLP+++LVIYSFN+ + + VW GFS +WY ELF+ +
Sbjct: 1 MQNNWSR--FNIVSVALGFAFLYLPIVLLVIYSFNESRLVTVWAGFSTKWYGELFR-NQA 57
Query: 63 IWKAFYYSIFIALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVS 121
+ A + +I + L+S+ ++T++GT A+AL ++ F+G+ M PLV+PD+I G+S
Sbjct: 58 LMDAAWVTIRVGLLSATIATVLGTLAALALTRYTRFRGRILFSGMVYAPLVMPDVITGLS 117
Query: 122 LLIMFATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLT 181
LL++F + F G T+ +AH TF++ +V +V SRL FD S+ EAA DLGA T
Sbjct: 118 LLLLFVAMNFDRGFWTVTLAHITFSMCFVAVVVQSRLVSFDRSLEEAAMDLGAPPVTTFM 177
Query: 182 KVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALS 241
KV +P++LPA++S +++A TLS DD VI F SGPG++TLP++IYS +RLGV+P +NA+
Sbjct: 178 KVTLPVILPAVVSGWMLAFTLSLDDLVIASFTSGPGATTLPMKIYSQVRLGVTPEINAVC 237
Query: 242 VILIVI 247
ILI +
Sbjct: 238 TILIAL 243
>gi|89204486|ref|ZP_01183063.1| Binding-protein-dependent transport systems inner membrane
component [Bacillus weihenstephanensis KBAB4]
gi|89157547|gb|EAR77539.1| Binding-protein-dependent transport systems inner membrane
component [Bacillus weihenstephanensis KBAB4]
Length = 266
Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats.
Identities = 113/235 (48%), Positives = 164/235 (69%), Gaps = 2/235 (0%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L ++F Y P++VL++YSFND + W GF+L WY +LF+ + I AF S+ IA+I++
Sbjct: 11 LILLFLYFPMMVLMVYSFNDSRINAEWEGFTLHWYTDLFQKQDVI-DAFVNSMTIAVITT 69
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
+V+T++G AIAL + ++ + + + LP+++PDI++G+SLLI+F+ L +LG TI
Sbjct: 70 IVTTVLGVIFAIALHRYKYRFEGAINGLVYLPILIPDILMGLSLLILFSQLGMELGKTTI 129
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
IAH TF+I +V+ I+ +RL + EAA DLGAT QT V P + P +ISA L+
Sbjct: 130 IIAHITFSISFVVVILAARLSGMGRDLEEAANDLGATPWQTFRYVTFPAIAPGVISAALL 189
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTL 253
TLS DDFVI+FFVSGPGS+TLPL IYSM++ GVSP +NALS ILIV+ + L +
Sbjct: 190 TFTLSIDDFVISFFVSGPGSTTLPLYIYSMVKRGVSPEINALSTILIVVIVGLMV 244
>gi|153011245|ref|YP_001372459.1| Ornithine carbamoyltransferase [Ochrobactrum anthropi ATCC 49188]
gi|151563133|gb|ABS16630.1| Ornithine carbamoyltransferase [Ochrobactrum anthropi ATCC 49188]
Length = 273
Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats.
Identities = 109/246 (44%), Positives = 166/246 (67%), Gaps = 5/246 (2%)
Query: 4 MSNNLNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNN 62
M NN +R + + L F YLP+++LVIYSFN+ + + VW GFS +WY ELF+ +
Sbjct: 1 MQNNWSRFNIASVA--LGFAFLYLPIVLLVIYSFNESRLVTVWAGFSTKWYVELFR-NQA 57
Query: 63 IWKAFYYSIFIALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVS 121
+ A + +I + L+S+ ++T++GT A+AL ++ F+G+ M PLV+PD+I G+S
Sbjct: 58 LMDAAWVTIRVGLLSATIATVLGTLAALALTRYTRFRGRILFSGMVYAPLVMPDVITGLS 117
Query: 122 LLIMFATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLT 181
LL++F + F G T+ +AH TF++ +V +V SRL FD S+ EAA DLGA T
Sbjct: 118 LLLLFVAMNFDRGFWTVTLAHITFSMCFVAVVVQSRLVSFDRSLEEAAMDLGAPPVTTFM 177
Query: 182 KVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALS 241
KV +P++LPA++S +++A TLS DD VI F SGPG++TLP++IYS +RLGV+P +NA+
Sbjct: 178 KVTLPVILPAVVSGWMLAFTLSLDDLVIASFTSGPGATTLPMKIYSQVRLGVTPEINAVC 237
Query: 242 VILIVI 247
ILI +
Sbjct: 238 TILIAL 243
>gi|30261390|ref|NP_843767.1| spermidine/putrescine ABC transporter, permease protein [Bacillus
anthracis str. Ames]
gi|42780474|ref|NP_977721.1| spermidine/putrescine ABC transporter, permease protein [Bacillus
cereus ATCC 10987]
gi|47526565|ref|YP_017914.1| spermidine/putrescine abc transporter, permease protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49184219|ref|YP_027471.1| spermidine/putrescine ABC transporter, permease protein [Bacillus
anthracis str. Sterne]
gi|49477488|ref|YP_035514.1| spermidine/putrescine ABC transporter, permease [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|52144047|ref|YP_082780.1| spermidine/putrescine ABC transporter, permease [Bacillus cereus
E33L]
gi|65318654|ref|ZP_00391613.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Bacillus anthracis str. A2012]
gi|118476861|ref|YP_894012.1| spermidine/putrescine ABC transporter, permease [Bacillus
thuringiensis str. Al Hakam]
gi|30255244|gb|AAP25253.1| spermidine/putrescine ABC transporter, permease protein [Bacillus
anthracis str. Ames]
gi|42736393|gb|AAS40329.1| spermidine/putrescine ABC transporter, permease protein [Bacillus
cereus ATCC 10987]
gi|47501713|gb|AAT30389.1| spermidine/putrescine ABC transporter, permease protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49178146|gb|AAT53522.1| spermidine/putrescine ABC transporter, permease protein [Bacillus
anthracis str. Sterne]
gi|49329044|gb|AAT59690.1| spermidine/putrescine ABC transporter, permease [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51977516|gb|AAU19066.1| spermidine/putrescine ABC transporter, permease [Bacillus cereus
E33L]
gi|118416086|gb|ABK84505.1| spermidine/putrescine ABC transporter, permease [Bacillus
thuringiensis str. Al Hakam]
Length = 266
Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats.
Identities = 110/228 (48%), Positives = 159/228 (69%), Gaps = 2/228 (0%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L ++F Y P++VL++YSFND + W GF+ WY +LF+ + I AF S+ IA++++
Sbjct: 11 LILLFLYFPMMVLMVYSFNDSRINAEWEGFTFHWYTDLFQKQDVI-DAFVNSMTIAIVTT 69
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
+V+T++G AIAL + ++ + + + LP+++PDI++G+SLLI+F+ L +LG TI
Sbjct: 70 IVTTVLGVIFAIALHRYKYRYEGAINGLVYLPILIPDILMGLSLLILFSQLGMELGKTTI 129
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
IAH TF+I +V+ I+ +RL + EAA DLGAT QT V P + P +ISA L+
Sbjct: 130 IIAHITFSISFVVVILAARLSGMGRDLEEAANDLGATPWQTFRYVTFPAIAPGVISAALL 189
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIV 246
TLS DDFVI+FFVSGPGS+TLPL IYSM++ GVSP +NALS ILIV
Sbjct: 190 TFTLSIDDFVISFFVSGPGSTTLPLYIYSMVKRGVSPEINALSTILIV 237
>gi|113935060|ref|ZP_01420959.1| Binding-protein-dependent transport systems inner membrane
component [Caulobacter sp. K31]
gi|113730524|gb|EAU11595.1| Binding-protein-dependent transport systems inner membrane
component [Caulobacter sp. K31]
Length = 287
Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 105/245 (42%), Positives = 160/245 (65%), Gaps = 9/245 (3%)
Query: 23 IFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVS 81
IF Y PLI L+ +SFND + +VW GF+L++Y + F H +++ +AF S+ IA + +++S
Sbjct: 29 IFLYAPLIALMAFSFNDSRRNIVWKGFTLKYYDKAF-HDSSLIEAFANSLTIAALCTVLS 87
Query: 82 TIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFAT-------LKFKLG 134
I+G A+ L F F GK L LP+VVP+I +GV++L+ FA L + L
Sbjct: 88 VILGAMVALVLWRFRFPGKTVLDGALALPIVVPEICMGVAMLVFFAKVLPWPVGLPWPLN 147
Query: 135 IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIIS 194
+ I IAH +F+ P+V +V +R+ F+ + EAA DLGA +T+ VI+P + P++++
Sbjct: 148 LGAITIAHVSFSFPFVAVVVRARMASFNREMEEAARDLGAGEWRTIWDVILPHMAPSLVA 207
Query: 195 AFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLS 254
L+A TLS DDFVITFF +GP + T P+++YSM+R V+P VNA S ILIV++++LT
Sbjct: 208 GALLAFTLSLDDFVITFFTAGPDTVTFPVKVYSMVRFSVTPEVNAASTILIVLTVILTAV 267
Query: 255 TKKLQ 259
KLQ
Sbjct: 268 ALKLQ 272
>gi|53804961|ref|YP_113364.1| spermidine/putrescine ABC transporter membrane component
[Methylococcus capsulatus str. Bath]
gi|53758722|gb|AAU93013.1| spermidine/putrescine ABC transporter, permease protein PotC
[Methylococcus capsulatus str. Bath]
Length = 270
Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats.
Identities = 104/232 (44%), Positives = 158/232 (68%), Gaps = 2/232 (0%)
Query: 19 ILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALIS 77
+L F YLP+ VL++ SFN K G+ W GF+L WY+ L + I A S+ +A +S
Sbjct: 25 VLIYAFLYLPMAVLILGSFNASKYGIGWQGFTLDWYENL-ANDAEILAAARNSLAVAALS 83
Query: 78 SLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
+ ++T++GT GA+ L + F+G+K+L + + L+ PDI++ VSLL++F L +LG+ T
Sbjct: 84 ASLATVVGTLGAVGLHRYRFRGRKFLMGLLFVTLMSPDIVMAVSLLVLFIGLHLELGLFT 143
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
+++AHT F +P+V V +RL FD ++VEAA DLGA + +V++P+ LPAI + +L
Sbjct: 144 LWLAHTGFCLPFVTLTVHARLQGFDNALVEAARDLGAGEWTAIRRVVLPLALPAIAAGWL 203
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
M+ TLS DD V++FFV+GP LPLRIYSM+RLGV P VNAL+ +L +S+
Sbjct: 204 MSFTLSLDDAVVSFFVTGPDFEVLPLRIYSMVRLGVKPEVNALASLLFAVSL 255
>gi|15964470|ref|NP_384823.1| PROBABLE PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN
[Sinorhizobium meliloti 1021]
gi|15073647|emb|CAC45289.1| PROBABLE PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN
[Sinorhizobium meliloti]
Length = 273
Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats.
Identities = 105/234 (44%), Positives = 160/234 (68%), Gaps = 3/234 (1%)
Query: 19 ILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALIS 77
+L F YLP+++LVI+SFN+ K + VW GFS +WY +L+ H+ + A + +I +AL+S
Sbjct: 13 VLGFGFLYLPIVLLVIFSFNESKLVTVWAGFSTKWYTQLW-HNQGLLDAAWVTIRVALLS 71
Query: 78 SLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGII 136
+ +T++GT A+AL ++ F+G+ M PLV+P++I G+SLL++F + F G
Sbjct: 72 ATCATVLGTLAALALVRYTRFRGRVLFSGMVYAPLVMPEVITGLSLLLLFVAIGFDRGFW 131
Query: 137 TIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAF 196
TI +AH TF + +V +V SRL FD SI EAA DLGAT +T + +P++ PA+ S +
Sbjct: 132 TITLAHITFTMCFVAVVVQSRLLSFDQSIEEAALDLGATPVRTFFAITLPVIAPAVFSGW 191
Query: 197 LMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISIL 250
++A TLS DD VI+ F +GPG++TLP++IYS +RLGV+P +NA+ ILI I L
Sbjct: 192 ILAFTLSLDDLVISSFTTGPGATTLPMKIYSQVRLGVTPEINAICTILIGIVAL 245
>gi|118442995|ref|YP_877311.1| spermidine/putrescine ABC transporter, permease protein 2
[Clostridium novyi NT]
gi|118133451|gb|ABK60495.1| spermidine/putrescine ABC transporter, permease protein 2
[Clostridium novyi NT]
Length = 263
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 108/239 (45%), Positives = 157/239 (65%), Gaps = 6/239 (2%)
Query: 4 MSNNLNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGMV-WNGFSLRWYKELFKHSNN 62
M N +R +F+IF+ F Y P++VL+++SFN+ K W+GF+L+WY LF +
Sbjct: 1 MVNKFLKRFYAFLIFV----FLYAPIVVLIVFSFNNSKSRAHWDGFTLKWYMALF-NDQQ 55
Query: 63 IWKAFYYSIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSL 122
I K+ YY+I +A++SSLV+TIIGT AI + KK + N++ LP++ PDI+ GV+L
Sbjct: 56 ILKSLYYTIAVAVLSSLVATIIGTAAAIGINNMKSVSKKIMLNINYLPVLNPDIVTGVAL 115
Query: 123 LIMFATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTK 182
+ +F K LG +T+ ++H TFNIPYV+ VL +L + EAA DLGAT L K
Sbjct: 116 MSLFIFAKLNLGFLTMLLSHITFNIPYVILSVLPKLRQLPKDTTEAAMDLGATPSYALRK 175
Query: 183 VIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALS 241
VI+P + P I++ LMA T+S DDFVI+FF +G G S L + IYSM R G++P +NA+S
Sbjct: 176 VILPQIKPGIVTGALMAFTMSIDDFVISFFTTGEGVSNLSITIYSMARRGINPKINAIS 234
>gi|150395540|ref|YP_001326007.1| Ornithine carbamoyltransferase [Sinorhizobium medicae WSM419]
gi|150027055|gb|ABR59172.1| Ornithine carbamoyltransferase [Sinorhizobium medicae WSM419]
Length = 273
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 103/234 (44%), Positives = 160/234 (68%), Gaps = 3/234 (1%)
Query: 19 ILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALIS 77
+L F YLP+++LVI+SFN+ K + VW GFS +WY +L++ + ++ A + +I +AL+S
Sbjct: 13 VLGFGFLYLPIVLLVIFSFNESKLVTVWAGFSTKWYGQLWQ-NQSLLDAAWVTIRVALLS 71
Query: 78 SLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGII 136
+ +T++GT A+AL ++ F+G+ M PLV+P++I G+SLL++F + F G
Sbjct: 72 ATCATVLGTMAALALVRYTRFRGRVLFSGMVYAPLVMPEVITGLSLLLLFVAIGFDRGFW 131
Query: 137 TIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAF 196
TI +AH TF + +V +V SRL FD SI EAA DLGAT +T + +P++ PA+ S +
Sbjct: 132 TITLAHITFTMCFVAVVVQSRLLSFDQSIEEAALDLGATPVRTFFAITLPVIAPAVFSGW 191
Query: 197 LMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISIL 250
++A TLS DD VI F +GPG++TLP++IYS +RLGV+P +NA+ ILI + L
Sbjct: 192 ILAFTLSLDDLVIASFTTGPGATTLPMKIYSQVRLGVTPEINAICTILIGVVAL 245
>gi|78358711|ref|YP_390160.1| polyamine ABC transporter, permease protein [Desulfovibrio
desulfuricans G20]
gi|78221116|gb|ABB40465.1| polyamine ABC transporter, permease protein [Desulfovibrio
desulfuricans G20]
Length = 256
Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats.
Identities = 98/238 (41%), Positives = 153/238 (64%), Gaps = 2/238 (0%)
Query: 24 FFYLPLIVLVIYSFNDGKGMV-WNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVST 82
F Y+P++V++ YS N+ K W GF+ +WY++LF + + A S+ +A +++ +T
Sbjct: 15 FLYIPILVVIAYSVNNAKYTTDWKGFTWKWYQQLFS-NQQLMDAAANSLMVATVAATCAT 73
Query: 83 IIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAH 142
++GT A+ + + F G+K L ++ + V PDI++G+SLLI F +LG T+ AH
Sbjct: 74 VLGTLAALCIHRYRFTGRKVLHGLTYVLTVSPDIVMGISLLIFFIFFHIELGFGTLLAAH 133
Query: 143 TTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTL 202
T +P+V VL R EFD +V AA DLGA+ Q VI+P+++PA+++ +L++ TL
Sbjct: 134 ITLCLPFVTVTVLGRFSEFDEDVVAAAKDLGASEGQAFRHVILPLIMPAVMAGWLLSFTL 193
Query: 203 SFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQK 260
S DD +I+FFV+GP LPLRIYSM+RLGV P +NALS +L ++I+L L L K
Sbjct: 194 SMDDVLISFFVTGPNFDILPLRIYSMVRLGVKPDINALSAVLFCLTIVLVLLAHTLSK 251
>gi|13475459|ref|NP_107023.1| ABC transporter, polyamine transport protein, permease protein
[Mesorhizobium loti MAFF303099]
gi|14026211|dbj|BAB52809.1| ABC transporter, polyamine transport protein, permease protein
[Mesorhizobium loti MAFF303099]
Length = 272
Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats.
Identities = 99/231 (42%), Positives = 155/231 (67%), Gaps = 3/231 (1%)
Query: 19 ILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALIS 77
+L F YLP+++L+++SFN+ K + VW GFS +WY LF H+ + A + + + +IS
Sbjct: 14 VLGFAFLYLPIVLLIVFSFNESKLVTVWGGFSTKWYVSLF-HNQGLMDATWVTARVGVIS 72
Query: 78 SLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGII 136
+ V+T++GT A+ L ++ F+G+ M PLV+P++I G+SLL++F + G
Sbjct: 73 ATVATVLGTLAALTLTRYTRFRGRVLFSGMVFAPLVMPEVITGLSLLLLFVAIGLDRGFF 132
Query: 137 TIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAF 196
T+ +AH T + +V +V SRL FD S+ EAA DLGAT +T ++ +P++LPAI+S +
Sbjct: 133 TVTLAHITLTMCFVAVVVQSRLVSFDRSLEEAAMDLGATPAKTFFQITLPVILPAIVSGW 192
Query: 197 LMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
++A TLS DD VI F SGPG++TLP++IYS +RLGV+P +NA ILI +
Sbjct: 193 MLAFTLSLDDLVIASFTSGPGATTLPMKIYSQVRLGVTPEINAACTILIAV 243
>gi|118728215|ref|ZP_01576781.1| binding-protein-dependent transport systems inner membrane
component [Clostridium cellulolyticum H10]
gi|118662405|gb|EAV69100.1| binding-protein-dependent transport systems inner membrane
component [Clostridium cellulolyticum H10]
Length = 273
Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats.
Identities = 111/237 (46%), Positives = 158/237 (66%), Gaps = 6/237 (2%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L +IF YLP++VL+ +SFN K W GF+ +WY+ELFK+S I A Y +I IAL+SS
Sbjct: 13 LILIFMYLPIVVLIAFSFNKSKSRGNWTGFTFKWYEELFKNSQ-IKDALYNTIVIALLSS 71
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL----KFKLG 134
+++ +IGT AI + + + NM+ LP++ PDI+ GVSL++MF + KLG
Sbjct: 72 VIAVVIGTLAAIGIHNMKKAKRTAVMNMTYLPVLNPDIVTGVSLMLMFVFIGTFVNLKLG 131
Query: 135 IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIIS 194
T+ +AH TFNIPYV+ VL +L + + ++ EAA DLGA++ KVIIP ++P I+S
Sbjct: 132 FFTMLLAHVTFNIPYVILCVLPKLKQMNTNLYEAALDLGASSSYAFRKVIIPQIMPGIVS 191
Query: 195 AFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILL 251
FLMA+TLS DDFVI++F +G G S L + IYSM R GV P +NALS ++ +LL
Sbjct: 192 GFLMAITLSVDDFVISYFTTGSGVSNLSITIYSMARTGVKPTINALSTLMFTGVLLL 248
>gi|116250538|ref|YP_766376.1| probable putrescine transport system permease protein [Rhizobium
leguminosarum bv. viciae 3841]
gi|115255186|emb|CAK06260.1| probable putrescine transport system permease protein; putative
putrescine transport system permease component of ABC
transporter [Rhizobium leguminosarum bv. viciae 3841]
Length = 272
Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats.
Identities = 105/236 (44%), Positives = 156/236 (66%), Gaps = 3/236 (1%)
Query: 14 SFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIF 72
+ I L F YLP+++LVI+SFN+ K + VW GFS +WY L + + A + +I
Sbjct: 8 NIISVTLGFAFLYLPIVLLVIFSFNESKLVTVWGGFSTKWYVSLLS-NQGLLDAAWVTIR 66
Query: 73 IALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF 131
+ L+S+ ++TI+GT A+ L ++ F+G+ M PLV+PD+I G+SLL++F + F
Sbjct: 67 VGLLSATLATILGTMAALTLVRYTRFRGRMLFSGMIYAPLVMPDVITGLSLLLLFVAIGF 126
Query: 132 KLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPA 191
G TI +AHTT + +V +V SRL FD SI EAA DLGA +T ++ +P++ PA
Sbjct: 127 DRGFWTITLAHTTLTMCFVAVVVQSRLLSFDQSIEEAAQDLGAPPVRTFFEITLPIIAPA 186
Query: 192 IISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
++S +++A TLS DD VI F SGPG++TLP+RIYS +RLGV+P +NA+ ILI I
Sbjct: 187 VLSGWILAFTLSLDDLVIASFTSGPGATTLPMRIYSQVRLGVTPEINAVCTILIAI 242
>gi|114770362|ref|ZP_01447900.1| Binding-protein-dependent transport systems inner membrane
component [alpha proteobacterium HTCC2255]
gi|114549199|gb|EAU52082.1| Binding-protein-dependent transport systems inner membrane
component [alpha proteobacterium HTCC2255]
Length = 279
Score = 181 bits (458), Expect = 6e-44, Method: Composition-based stats.
Identities = 114/246 (46%), Positives = 161/246 (65%), Gaps = 9/246 (3%)
Query: 10 RRKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFY 68
R K ++ + M FFY+P+I+LVIYSFN K +VW G+S RWYK LF+ S +W A
Sbjct: 5 RSKFLTVMLTIGMAFFYIPIILLVIYSFNYSKLVLVWGGWSTRWYKVLFE-SEEVWAAVN 63
Query: 69 YSIFIALISSLVSTIIGTFGAIALKWF-DFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFA 127
S+ IAL+++ +TI+G A+++ F F+G+ M V PLV+P++I G+SLL+MF
Sbjct: 64 MSLKIALVNATFATILGMLAALSMVRFGKFRGRTLFGGMLVAPLVMPEVITGLSLLVMFI 123
Query: 128 TLKF------KLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLT 181
TLK G TI IAH TF++ YV + +RL S+ EAA DLGA + LT
Sbjct: 124 TLKQFFGWPENRGFATITIAHITFSMAYVAVTIQARLTGMGQSLEEAAADLGAKPFKVLT 183
Query: 182 KVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALS 241
+ +P L PA+IS +L+A TLS DD VI FVSGPG++TLP+ I+S IRLG+ P +NAL+
Sbjct: 184 AITMPRLTPALISGWLLAFTLSLDDLVIASFVSGPGANTLPILIFSRIRLGLRPDINALA 243
Query: 242 VILIVI 247
I+I++
Sbjct: 244 TIIILV 249
>gi|46578513|ref|YP_009321.1| spermidine/putrescine ABC transporter membrane component
[Desulfovibrio vulgaris subsp. vulgaris str.
Hildenborough]
gi|120603904|ref|YP_968304.1| binding-protein-dependent transport systems inner membrane
component [Desulfovibrio vulgaris subsp. vulgaris DP4]
gi|46447924|gb|AAS94580.1| polyamine ABC transporter, permease protein [Desulfovibrio vulgaris
subsp. vulgaris str. Hildenborough]
gi|120564133|gb|ABM29877.1| binding-protein-dependent transport systems inner membrane
component [Desulfovibrio vulgaris subsp. vulgaris DP4]
Length = 257
Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats.
Identities = 103/240 (42%), Positives = 160/240 (66%), Gaps = 2/240 (0%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F YLP++V+++YSFN K W+GF+L WY +L ++ + A S+ +A +S+
Sbjct: 13 LVYAFLYLPILVVIVYSFNASKYSTAWSGFTLDWYAKLLANTPLV-DAALNSLSVATLSA 71
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
++T++G+ A+ L + F G+K L + + V PDI++G+SLLI F L+ +LG +T+
Sbjct: 72 TLATLLGSLAAMCLHRYRFPGRKVLHSSIYVLTVSPDIVMGISLLIFFIALRMELGFVTL 131
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
IAHTT +P+V VL+RL EFD +VEAA DLGA+ +I+P+ LPA+ + +L+
Sbjct: 132 LIAHTTLGLPFVTVTVLARLAEFDEHLVEAARDLGASEAAAYRHIILPLTLPAVAAGWLL 191
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKL 258
+ TLS DD +I+FFV+GP LPL+IYSM+RLGV P +NALS ++ ++I+L L + L
Sbjct: 192 SFTLSMDDVLISFFVTGPSFEVLPLKIYSMVRLGVKPDINALSAVMFGVTIVLVLLAQAL 251
>gi|59711924|ref|YP_204700.1| spermidine/putrescine ABC transporter membrane component [Vibrio
fischeri ES114]
gi|59480025|gb|AAW85812.1| spermidine/putrescine transport system permease protein PotC
[Vibrio fischeri ES114]
Length = 256
Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats.
Identities = 107/255 (41%), Positives = 174/255 (68%), Gaps = 2/255 (0%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYY 69
R F L +F YLP+IVL+ SFN K GM W GF+ +WY+ L +++++ +A ++
Sbjct: 3 RTIRFSFMSLVYLFLYLPIIVLIANSFNASKFGMKWGGFTTKWYEALV-NNDSLMQAAWH 61
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
SI IA+IS +TIIG+ A+AL + FKGKK++ + + ++ PDI++ +SLL +F +
Sbjct: 62 SITIAVISGTAATIIGSLTAVALFRYQFKGKKFVNGLLFVVMMSPDIVMAISLLAIFLVI 121
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
F+LG +T+ IAH TF +P+V+ V SRL FD ++EAA DLGA+ L ++I+P+
Sbjct: 122 GFELGFLTLLIAHITFCLPFVVVTVYSRLKGFDVKMLEAARDLGASEWVILKQIILPLAK 181
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
PA+ + +L++ TLS DD +I+ FV+GP LPL+IYSM+++G+SP VNAL+ +++ +S+
Sbjct: 182 PAVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLFVSL 241
Query: 250 LLTLSTKKLQKNFIK 264
+L + ++ L + IK
Sbjct: 242 ILVVLSQLLAREKIK 256
>gi|39937218|ref|NP_949494.1| ABC transporter, polyamine transport protein, permease protein
[Rhodopseudomonas palustris CGA009]
gi|39651076|emb|CAE29599.1| ABC transporter, polyamine transport protein, permease protein
[Rhodopseudomonas palustris CGA009]
Length = 266
Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats.
Identities = 99/245 (40%), Positives = 159/245 (64%), Gaps = 4/245 (1%)
Query: 14 SFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIF 72
+ + L + F YLP+++LV+YSFND + + VW G+SLRWY+E F+ + A + S+
Sbjct: 7 NLVSLTLGLAFLYLPIVILVVYSFNDSRLVTVWGGWSLRWYREFFQ-DQPMLDAAWMSLR 65
Query: 73 IALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF 131
+AL S+ + ++GT A+AL + FKG+ M PLV+P++I G+SLL++F +
Sbjct: 66 VALTSATAAAVLGTLAAVALSRAGHFKGRTLFSGMLYAPLVMPEVITGLSLLLLFVAISA 125
Query: 132 KLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPA 191
+ G T+ IAHTT + +V +V SRL D SI EAA DLG + + +P++ PA
Sbjct: 126 ERGFWTVVIAHTTLTMCFVAVVVQSRLHALDRSIEEAAMDLGCAPVEAFLRATVPLIWPA 185
Query: 192 IISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL-SVILIVISIL 250
I + +++A LS DD VI F +GPGS+TLP+RIYS +RLGV P +NA+ ++I+ +++L
Sbjct: 186 IAAGWMLAFALSLDDLVIASFTTGPGSTTLPIRIYSEVRLGVKPEINAICTLIIAAVTVL 245
Query: 251 LTLST 255
+ +++
Sbjct: 246 IVVAS 250
>gi|90413860|ref|ZP_01221847.1| putative spermidine/putrescine ABC transporter, permease protein
[Photobacterium profundum 3TCK]
gi|90325171|gb|EAS41674.1| putative spermidine/putrescine ABC transporter, permease protein
[Photobacterium profundum 3TCK]
Length = 256
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 100/255 (39%), Positives = 174/255 (68%), Gaps = 2/255 (0%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYY 69
R F L F Y P+++L++ SFN K GM W GF+ +WY++LF +++++ +A ++
Sbjct: 3 RTFKFGFMSLVYAFLYTPILILIVNSFNSSKFGMKWGGFTTKWYEQLF-NNDSLMQAAWH 61
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
SI IA+ S+ + IIG+ A+AL + F+GKK++ M + ++ PDI++ +SLL +F +
Sbjct: 62 SITIAVFSASAAAIIGSLTAVALFRYQFRGKKFVNGMLFVVMMSPDIVMAISLLALFLLM 121
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
+LG +T+ ++H TF +P+V+ V SRL FD ++EAA DLGA+ L ++I+P+
Sbjct: 122 GAQLGFLTLLLSHITFCLPFVVVTVYSRLKGFDVKMLEAARDLGASEWVILKQIILPLAK 181
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
PA+ + +L++ TLS DD +++ FV+GP LPL+IYSM+++G+SP VNAL+ I++++S+
Sbjct: 182 PAVAAGWLLSFTLSLDDVIVSSFVTGPSYEILPLKIYSMVKVGISPEVNALATIMLIVSL 241
Query: 250 LLTLSTKKLQKNFIK 264
L + ++ L ++ IK
Sbjct: 242 FLVVCSQLLARDKIK 256
>gi|153854794|ref|ZP_01996028.1| hypothetical protein DORLON_02026 [Dorea longicatena DSM 13814]
gi|149752701|gb|EDM62632.1| hypothetical protein DORLON_02026 [Dorea longicatena DSM 13814]
Length = 630
Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats.
Identities = 91/240 (37%), Positives = 156/240 (65%), Gaps = 11/240 (4%)
Query: 7 NLNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGMV-WNGFSLRWYKELFKHSNNIWK 65
N +R I+ IL+++FFYLP++ ++I+SFNDGK + + GFSLRWYK + + S ++
Sbjct: 2 NKGKRPIGKILMILSVVFFYLPILYMIIFSFNDGKSLTSFTGFSLRWYKHMLE-SADMMD 60
Query: 66 AFYYSIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNM----SVLPLVVPDIIIGVS 121
A + IAL+++ +ST+ GT AI + K KK ++++ + LP++ P+I+ +
Sbjct: 61 ALSTTFSIALLATFISTVAGTIAAIGVS----KSKKLIRDLMEQANNLPIMNPEIVTAIG 116
Query: 122 LLIMFATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLT 181
+++F T + G +T+ +AH F IPYV+ V+ ++ D ++ +AA DLGAT Q LT
Sbjct: 117 FMLLFITFHVEKGYVTMLLAHIAFCIPYVMLSVMPKIKSLDPNLADAAMDLGATPWQALT 176
Query: 182 KVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALS 241
KV++P + P I++ L+A T+S DDF+I++FV+G G L + +Y+M + V+P +NA+S
Sbjct: 177 KVVVPQITPGIVAGALIAFTMSVDDFIISYFVTGRGVKNLSIMVYTMSKR-VNPSINAIS 235
>gi|154484066|ref|ZP_02026514.1| hypothetical protein EUBVEN_01777 [Eubacterium ventriosum ATCC
27560]
gi|149735108|gb|EDM50994.1| hypothetical protein EUBVEN_01777 [Eubacterium ventriosum ATCC
27560]
Length = 625
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 96/238 (40%), Positives = 154/238 (64%), Gaps = 6/238 (2%)
Query: 8 LNRRKTSF---IIFILAMIFFYLPLIVLVIYSFNDGKGMV-WNGFSLRWYKELFKHSNNI 63
+N++K S + L IFFYLP+ V + +SFN K + + GFSL+WYK+L N+I
Sbjct: 1 MNKKKISIGPKLYITLCFIFFYLPIAVTMFFSFNSSKSLTKFTGFSLKWYKKLLT-DNDI 59
Query: 64 WKAFYYSIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLL 123
A Y SI IA+I++++ST++GT AI L +++L N++ +P++ PDI+ + L+
Sbjct: 60 IAAVYVSISIAVIATIISTVLGTITAIGLSRSRKILREWLLNVNNMPIMNPDIVTAIGLM 119
Query: 124 IMFATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKV 183
I+F +++ + G +T+ +AH F PYV+ V ++ D+++ A DLGAT Q LTKV
Sbjct: 120 ILFTSMRLERGYLTMLLAHIAFCTPYVITSVYPKVRSMDHNLANVAMDLGATPFQALTKV 179
Query: 184 IIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALS 241
IIPML P I + L+A T+S DDFV+++FV+G G S + + +Y+M + +P +NALS
Sbjct: 180 IIPMLKPGIFAGMLLAFTMSLDDFVVSYFVTGNGVSNISIVVYNMTKR-TNPTINALS 236
>gi|47566173|ref|ZP_00237201.1| spermidine/putrescine ABC transporter, permease protein [Bacillus
cereus G9241]
gi|47556726|gb|EAL15057.1| spermidine/putrescine ABC transporter, permease protein [Bacillus
cereus G9241]
Length = 266
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 110/228 (48%), Positives = 159/228 (69%), Gaps = 2/228 (0%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L ++F Y P++VL++YSFND + W GF+ WY +LF+ + I AF S+ IA++++
Sbjct: 11 LILLFLYFPMMVLMVYSFNDSRINAEWEGFTFHWYTDLFQKQDVI-DAFVNSMTIAVVTT 69
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
+V+T++G AIAL + ++ + + + LP+++PDI++G+SLLI+F+ L +LG TI
Sbjct: 70 IVTTVLGVIFAIALHRYKYRYEGAINGLVYLPILIPDILMGLSLLILFSQLGMELGKTTI 129
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
IAH TF+I +V+ I+ +RL + EAA DLGAT QT V P + P +ISA L+
Sbjct: 130 IIAHITFSISFVVVILAARLSGMGRDLEEAANDLGATPWQTFRYVTFPAIAPGVISAALL 189
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIV 246
TLS DDFVI+FFVSGPGS+TLPL IYSM++ GVSP +NALS ILIV
Sbjct: 190 TFTLSIDDFVISFFVSGPGSTTLPLYIYSMVKRGVSPEINALSTILIV 237
>gi|110632528|ref|YP_672736.1| binding-protein-dependent transport systems inner membrane
component [Mesorhizobium sp. BNC1]
gi|110283512|gb|ABG61571.1| binding-protein-dependent transport systems inner membrane
component [Mesorhizobium sp. BNC1]
Length = 272
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 104/230 (45%), Positives = 157/230 (68%), Gaps = 3/230 (1%)
Query: 18 FILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALI 76
+L F YLP+++LVIYSFN+ + + VW GFS RWY L + + +A + + IA I
Sbjct: 13 LVLGFAFLYLPIVLLVIYSFNESRLVTVWAGFSTRWYVSLLS-NRGLMEAAWVTARIAFI 71
Query: 77 SSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGI 135
S+ V+T++GT A+AL ++ F+G+ M PLV+P++I G+SLL++F + G
Sbjct: 72 SATVATVLGTMAAVALTRYTRFRGRLLFSGMVFAPLVMPEVITGLSLLLLFVAIGLDRGF 131
Query: 136 ITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISA 195
+T+ +AH TF++ +V +V SRL FD S+ EAA DLGAT + +V +P++LPA+IS
Sbjct: 132 MTVTLAHITFSMCFVAVVVQSRLVSFDRSLEEAAMDLGATPMRAFFQVTLPIILPAVISG 191
Query: 196 FLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
+++A TLS DD VI F SGPG++TLP++IYS +RLGV+P +NA+ ILI
Sbjct: 192 WMLAFTLSLDDLVIASFTSGPGATTLPMKIYSQVRLGVTPEINAVCTILI 241
>gi|93005068|ref|YP_579505.1| binding-protein-dependent transport systems inner membrane
component [Psychrobacter cryohalolentis K5]
gi|92392746|gb|ABE74021.1| binding-protein-dependent transport systems inner membrane
component [Psychrobacter cryohalolentis K5]
Length = 276
Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats.
Identities = 103/240 (42%), Positives = 163/240 (67%), Gaps = 2/240 (0%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L YLP+IVLV+ SFN K G W GFSL+WY+ L ++ + AF++SI + L+++
Sbjct: 34 LIYTLLYLPIIVLVVMSFNKSKIGYNWGGFSLKWYESLL-NNQAMLDAFWHSILLGLVAA 92
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
VSTIIGT A+AL +DF+GK L + + ++ P+I++ +SLL +F + +LG +++
Sbjct: 93 TVSTIIGTLTALALHRYDFRGKGLLNGLLFVLMMSPEIVLAISLLALFLLIGLQLGFVSL 152
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
+AH TF +P+V+ V +RL D ++EAA DLGA+ + V+IP++ PA+++ +L+
Sbjct: 153 LLAHITFCLPFVVITVFARLSSLDERLMEAARDLGASESTMVRTVLIPVIFPAVMAGWLL 212
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKL 258
A TLS DD V++ FV+GP LPLRIYSM+R+G+ P VNA+ IL+V S++L + ++ L
Sbjct: 213 AFTLSLDDVVVSTFVTGPSYEILPLRIYSMVRVGLKPEVNAIGTILLVASLILVVISQLL 272
>gi|114705305|ref|ZP_01438213.1| spermidine/putrescine ABC transporter, permease protein, putative
[Fulvimarina pelagi HTCC2506]
gi|114540090|gb|EAU43210.1| spermidine/putrescine ABC transporter, permease protein, putative
[Fulvimarina pelagi HTCC2506]
Length = 271
Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats.
Identities = 103/244 (42%), Positives = 163/244 (66%), Gaps = 3/244 (1%)
Query: 19 ILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALIS 77
I+ F YLP+++LVIYSFN + + VW GFS RWY +LF ++ + A + ++ + ++S
Sbjct: 14 IIGFSFLYLPIVLLVIYSFNASQLVTVWAGFSTRWYVQLF-NNQGLLDAAWVTLRVGVLS 72
Query: 78 SLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGII 136
+ V+T++GTF A+AL ++ F+G+ M PLV+P++I G+SLL++F + F G
Sbjct: 73 ATVATLLGTFAAVALTRYTRFRGRVLFTGMVYAPLVMPEVITGLSLLLLFVAIDFDRGFW 132
Query: 137 TIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAF 196
T+ +AH TF++ +V IV S+L FD S+ EAA DLGAT +T + +P++ PA+ + +
Sbjct: 133 TVTLAHITFSMCFVAVIVQSKLLSFDRSLEEAAMDLGATPAKTFLSITLPVIWPAVAAGW 192
Query: 197 LMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTK 256
L+A TLS DD V+ F +GP ++TLP++IYS +RLGV+P +NA+ ILI I + LS
Sbjct: 193 LLAFTLSLDDLVVASFTTGPAATTLPMKIYSAVRLGVTPEINAVCTILIAIVTVGVLSAT 252
Query: 257 KLQK 260
+ K
Sbjct: 253 LVNK 256
>gi|151937927|gb|EDN56772.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
Length = 256
Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats.
Identities = 103/255 (40%), Positives = 172/255 (67%), Gaps = 2/255 (0%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYY 69
R F L F YLP++VL++ SFN K GM W GF+ +WY+ L +++++ +A ++
Sbjct: 3 RTVRFSFMALVYAFLYLPIVVLIVNSFNANKFGMKWGGFTTKWYETLV-NNDSLMQAAWH 61
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
S+ +A+ S+ +TIIG+ A+AL + FKGK + M + ++ PDI++ +SLL +F L
Sbjct: 62 SLNVAVFSATAATIIGSLTAVALFRYSFKGKGAVNGMLFVVMMSPDIVMAISLLALFLVL 121
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
+LG T+ IAH TF +P+V+ V SRL+ FD ++EAA DLGA+ L ++I+P+
Sbjct: 122 GAQLGFFTLLIAHITFCLPFVVVTVYSRLNGFDVKMLEAAKDLGASEWVILKQIILPLAK 181
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
PA+ + +L++ TLS DD +I+ FV+GP LPL+IYSM+++G+SP VNAL+ +++V+S+
Sbjct: 182 PAVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSL 241
Query: 250 LLTLSTKKLQKNFIK 264
+L + ++ L + +K
Sbjct: 242 ILVVISQLLAREKVK 256
>gi|154502785|ref|ZP_02039845.1| hypothetical protein RUMGNA_00599 [Ruminococcus gnavus ATCC 29149]
gi|153796668|gb|EDN79088.1| hypothetical protein RUMGNA_00599 [Ruminococcus gnavus ATCC 29149]
Length = 627
Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 144/221 (65%), Gaps = 2/221 (0%)
Query: 32 LVIYSFNDGKGMV-WNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAI 90
LV+ SFN+ K W GF+ +WY LF++ + I A Y ++ IAL+S+L++T+IGT ++
Sbjct: 24 LVVLSFNNSKTRAKWGGFTGKWYISLFQNPD-IMNALYTTLIIALLSALIATLIGTAASL 82
Query: 91 ALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYV 150
++ K + ++ ++ +P++ DI+ G+SL+++F +F LG T+ +AH TFNIPYV
Sbjct: 83 GIQAMKPKMRTFMMGVTNIPMLNADIVTGISLMLLFVAFRFTLGFSTVLLAHITFNIPYV 142
Query: 151 LFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVIT 210
+ V+ +L + S EAA DLGA+ KV++P ++P IIS FL+A T+S DDFVIT
Sbjct: 143 ILSVMPKLKQTKKSTYEAALDLGASPIYAFFKVVLPDIMPGIISGFLLAFTMSLDDFVIT 202
Query: 211 FFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILL 251
F GPG TL +IYS +R G+ P + ALS I+ + ++L
Sbjct: 203 HFTKGPGVDTLSTKIYSEVRKGIKPEMYALSTIMFMTVLVL 243
>gi|54309040|ref|YP_130060.1| spermidine/putrescine ABC transporter membrane component
[Photobacterium profundum SS9]
gi|46913472|emb|CAG20258.1| putative spermidine/putrescine ABC transporter, permease protein
[Photobacterium profundum SS9]
Length = 256
Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats.
Identities = 99/255 (38%), Positives = 173/255 (67%), Gaps = 2/255 (0%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYY 69
R F L F Y P+++L++ SFN K GM W GF+ +WY++L +++++ +A ++
Sbjct: 3 RTFKFGFMTLVYAFLYTPILILIVNSFNASKFGMKWGGFTTKWYEQLL-NNDSLIQAAWH 61
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
SI IA+ S+ + IIG+ A+AL + F+GKK++ M + ++ PDI++ +SLL +F +
Sbjct: 62 SITIAVFSATAAAIIGSLTAVALFRYQFRGKKFVNGMLFVVMMSPDIVMAISLLALFLIM 121
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
+LG +T+ ++H TF +P+V+ V SRL FD ++EAA DLGA+ L ++I+P+
Sbjct: 122 GAQLGFLTLLLSHITFCLPFVVVTVYSRLKGFDVKMLEAARDLGASEWVILKQIILPLAK 181
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
PA+ + +L++ TLS DD +++ FV+GP LPL+IYSM+++G+SP VNAL+ I++++S+
Sbjct: 182 PAVAAGWLLSFTLSLDDVIVSSFVTGPSYEILPLKIYSMVKVGISPEVNALATIMLIVSL 241
Query: 250 LLTLSTKKLQKNFIK 264
L + ++ L ++ IK
Sbjct: 242 FLVVCSQLLARDKIK 256
>gi|28898301|ref|NP_797906.1| spermidine/putrescine ABC transporter membrane component [Vibrio
parahaemolyticus RIMD 2210633]
gi|28806518|dbj|BAC59790.1| spermidine/putrescine ABC transporter, permease protein [Vibrio
parahaemolyticus RIMD 2210633]
Length = 256
Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats.
Identities = 103/255 (40%), Positives = 172/255 (67%), Gaps = 2/255 (0%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYY 69
R F L F YLP+IVL++ SFN K GM W GF+ +WY+ L +++++ +A ++
Sbjct: 3 RTVRFSFMALVYAFLYLPIIVLIVNSFNANKFGMKWGGFTTKWYETLV-NNDSLMQAAWH 61
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
S+ +A+ S+ +TIIG+ A+AL + FKGK + M + ++ PDI++ +SLL +F L
Sbjct: 62 SLNVAVFSATAATIIGSLTAVALFRYSFKGKGAVNGMLFVVMMSPDIVMAISLLALFLVL 121
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
+LG T+ IAH TF +P+V+ V SRL+ FD ++EAA DLGA+ L ++I+P+
Sbjct: 122 GAQLGFFTLLIAHITFCLPFVVVTVYSRLNGFDVKMLEAAKDLGASEWVILKQIILPLAK 181
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
PA+ + +L++ TLS DD +I+ FV+GP LPL+IYSM+++G+SP VNAL+ +++++S+
Sbjct: 182 PAVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLIVSL 241
Query: 250 LLTLSTKKLQKNFIK 264
+L + ++ L + +K
Sbjct: 242 VLVVISQLLAREKVK 256
>gi|154246878|ref|YP_001417836.1| Ornithine carbamoyltransferase [Xanthobacter autotrophicus Py2]
gi|154160963|gb|ABS68179.1| Ornithine carbamoyltransferase [Xanthobacter autotrophicus Py2]
Length = 272
Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats.
Identities = 99/224 (44%), Positives = 150/224 (66%), Gaps = 3/224 (1%)
Query: 19 ILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALIS 77
+L F Y+P+++LVIYSFN + + VW GFS +WY L ++ + A + ++ IA S
Sbjct: 14 VLGFAFLYIPILLLVIYSFNASRLVTVWAGFSTQWYWALLENEQ-LMDAAWVTLRIAFFS 72
Query: 78 SLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGII 136
SLVST++GT A+ L ++ F G+ M PLV+P++I G+SLL++F + F G
Sbjct: 73 SLVSTVLGTMAALTLTRYGRFPGRTLFSGMIYAPLVMPEVITGLSLLLLFVAVNFDRGFW 132
Query: 137 TIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAF 196
T+ +AH TF + +V +V SRL FD ++ EAA DLG +T K+ +P++LPA++S F
Sbjct: 133 TVLLAHITFTMCFVAVVVQSRLVTFDRALEEAALDLGCPPFKTFFKITLPLILPAVVSGF 192
Query: 197 LMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL 240
++A TLS DD VI F +GPG++TLP+RIYS +RLGV+P +NA+
Sbjct: 193 MLAFTLSLDDLVIASFTTGPGATTLPMRIYSQVRLGVTPEINAV 236
>gi|152980487|ref|YP_001354794.1| spermidine/putrescine transport system permease protein
[Janthinobacterium sp. Marseille]
gi|151280564|gb|ABR88974.1| spermidine/putrescine transport system permease protein
[Janthinobacterium sp. Marseille]
Length = 259
Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats.
Identities = 104/244 (42%), Positives = 160/244 (65%), Gaps = 5/244 (2%)
Query: 19 ILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALIS 77
+L F Y+PL ++V+YSFND + W GF+L WY+ LF + + +A S+ IAL+S
Sbjct: 16 VLVYAFLYVPLAIVVVYSFNDSRLNAEWVGFTLDWYRTLFANEE-MLRAAGNSLIIALVS 74
Query: 78 SLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
S VST++GT AL + + L+ + + P+ +P+I++GVSLLI F L LG+++
Sbjct: 75 SAVSTLLGTMAGFALHRYKIR---LLQVLVLTPIAIPEILVGVSLLIFFVMLNLTLGMLS 131
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
+ +AH F++ +V +V SRL D S+ EAA D GAT Q +V +P+++P +++ L
Sbjct: 132 VTLAHIAFSMGFVAIVVRSRLSGMDESLTEAARDCGATPWQAFRRVTLPLIMPGVVAGAL 191
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKK 257
MA TLS DDFVITFF +G +STLPL+IYSMI++ V+P VNA+S +L+ +++ L + K
Sbjct: 192 MAFTLSIDDFVITFFTAGANTSTLPLQIYSMIKIAVTPEVNAVSTLLMALTLFLIVIASK 251
Query: 258 LQKN 261
L N
Sbjct: 252 LSPN 255
>gi|127511909|ref|YP_001093106.1| binding-protein-dependent transport systems inner membrane
component [Shewanella loihica PV-4]
gi|126637204|gb|ABO22847.1| binding-protein-dependent transport systems inner membrane
component [Shewanella loihica PV-4]
Length = 275
Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats.
Identities = 110/258 (42%), Positives = 163/258 (63%), Gaps = 9/258 (3%)
Query: 4 MSNNLNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNN 62
MSN L + S ++ M F Y P+ +LV YSFN+ K + VW GFS +WY ELF+ +
Sbjct: 1 MSNRLRKLSFSTLMLWGGMFFLYAPMFILVFYSFNESKLVTVWGGFSAKWYGELFR-DDQ 59
Query: 63 IWKAFYYSIFIALISSLVSTIIGTFGAIALKWFDFK-GKKYLKNMSVLPLVVPDIIIGVS 121
I A S+ +A +S ++ I+GT A + F GK L NM PLV+P++I G+S
Sbjct: 60 ILDAVATSLKVAFFASTMAVILGTMAAFVMTRFARSWGKMTLSNMITAPLVMPEVITGLS 119
Query: 122 LLIMFATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGAT 175
LL++F + LG ++T++IAH+TF YV +V SRL E D SI EAA DLGAT
Sbjct: 120 LLLLFVHMADLLGWPAERGMLTVWIAHSTFCAAYVAVVVSSRLRELDMSIEEAAQDLGAT 179
Query: 176 NRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSP 235
+T + +PM+ PA+I+ +L++ +LS DD VI F SGPG++TLP+ ++S +R+GVSP
Sbjct: 180 PLKTFFHITVPMISPALIAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSVRMGVSP 239
Query: 236 VVNALSVILIVISILLTL 253
+NAL+ ++I+I L+
Sbjct: 240 KINALATLIILIVSLIAF 257
>gi|156974569|ref|YP_001445476.1| hypothetical protein VIBHAR_02287 [Vibrio harveyi ATCC BAA-1116]
gi|156526163|gb|ABU71249.1| hypothetical protein VIBHAR_02287 [Vibrio harveyi ATCC BAA-1116]
Length = 256
Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats.
Identities = 103/255 (40%), Positives = 171/255 (67%), Gaps = 2/255 (0%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYY 69
R F L F YLP+IVL++ SFN K GM W GF+ +WY+ L ++++ +A ++
Sbjct: 3 RTVRFSFMALVYAFLYLPIIVLIVNSFNANKFGMKWGGFTTKWYETLVS-NDSLMQAAWH 61
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
S+ +A+ S+ +TIIG+ A+AL + FKGK + M + ++ PDI++ +SLL +F L
Sbjct: 62 SLNVAVFSATAATIIGSLTAVALFRYSFKGKGAVNGMLFVVMMSPDIVMAISLLALFLVL 121
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
+LG T+ IAH TF +P+V+ V SRL+ FD ++EAA DLGA+ L ++I+P+
Sbjct: 122 GAQLGFFTLLIAHITFCLPFVVVTVYSRLNGFDVKMLEAAKDLGASEWVILKQIILPLAK 181
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
PA+ + +L++ TLS DD +I+ FV+GP LPL+IYSM+++G+SP VNAL+ +++++S+
Sbjct: 182 PAVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLIVSL 241
Query: 250 LLTLSTKKLQKNFIK 264
+L + ++ L + +K
Sbjct: 242 VLVVISQLLAREKVK 256
>gi|94313322|ref|YP_586531.1| binding-protein-dependent transport systems inner membrane
component [Ralstonia metallidurans CH34]
gi|93357174|gb|ABF11262.1| binding-protein-dependent transport systems inner membrane
component [Ralstonia metallidurans CH34]
Length = 260
Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats.
Identities = 93/239 (38%), Positives = 159/239 (66%), Gaps = 5/239 (2%)
Query: 24 FFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVST 82
F YLPL+++V YSFND + W+GF+L WY ++ ++ A + S+ I I++ S
Sbjct: 20 FLYLPLLIVVAYSFNDSRLNAEWDGFTLHWY-DVLASDPDMLGAAWNSLMIGAIAAGTSC 78
Query: 83 IIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAH 142
++GT AIAL + L + + P+ +P++++GVSLL+ F + LG+ + ++H
Sbjct: 79 VLGTLAAIALHRYR---PPLLATLVLAPIAMPEVLMGVSLLLFFVAVNIDLGLTAVALSH 135
Query: 143 TTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTL 202
TF + +V +V +RL+ D S+++AA DLGA+ Q V++P++LP +++ L+A TL
Sbjct: 136 ITFCVGFVAVVVRARLEGLDESLIDAARDLGASPLQAGWHVMLPLMLPGVLAGALLAFTL 195
Query: 203 SFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKN 261
S DDFV+TFF +GPG TLPL+IYSMIR+ V+P VNA+S IL+++++ ++L+ ++ ++
Sbjct: 196 SMDDFVVTFFTAGPGQPTLPLQIYSMIRIAVTPEVNAISSILMMLTLAVSLTAYRVSRD 254
>gi|84385475|ref|ZP_00988506.1| spermidine/putrescine ABC transporter, permease protein [Vibrio
splendidus 12B01]
gi|84379455|gb|EAP96307.1| spermidine/putrescine ABC transporter, permease protein [Vibrio
splendidus 12B01]
Length = 256
Score = 177 bits (448), Expect = 7e-43, Method: Composition-based stats.
Identities = 103/255 (40%), Positives = 169/255 (66%), Gaps = 2/255 (0%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYY 69
R F L F YLP+IVL+ SFN K GM W GF+ +WY L +++++ +A ++
Sbjct: 3 RTVKFSFMALVYAFLYLPIIVLIANSFNANKFGMKWGGFTTKWYDALI-NNDSLMQAAWH 61
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
SI +A+ S+ +TI+G+ A+AL + FKGK + M + ++ PDI++ +SLL +F +
Sbjct: 62 SINVAVFSATAATIVGSLTAVALFRYQFKGKGIVNGMLFIVMMSPDIVMAISLLALFLVM 121
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
+LG T+ AH TF +P+V+ V SRL+ FD ++EAA DLGA+ L ++I+P+
Sbjct: 122 GVQLGFFTLLAAHITFCLPFVVVTVYSRLNGFDVKMLEAAKDLGASEWTILKQIILPLAK 181
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
PA+ + +L++ TLS DD +I+ FV+GP LPL+IYSM+++G+SP VNAL+ +++V+S+
Sbjct: 182 PAVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSL 241
Query: 250 LLTLSTKKLQKNFIK 264
+L + ++ L + IK
Sbjct: 242 ILVIISQLLAREKIK 256
>gi|86356368|ref|YP_468260.1| spermidine/putrescine ABC transporter, permease component II
protein [Rhizobium etli CFN 42]
gi|86280470|gb|ABC89533.1| spermidine/putrescine ABC transporter, permease component II
protein [Rhizobium etli CFN 42]
Length = 272
Score = 177 bits (448), Expect = 8e-43, Method: Composition-based stats.
Identities = 102/236 (43%), Positives = 155/236 (65%), Gaps = 3/236 (1%)
Query: 14 SFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIF 72
+ I +L F YLP+++LV++SFN+ K + VW GFS +WY L + + A + +I
Sbjct: 8 NIISVVLGFAFLYLPIVLLVVFSFNESKLVTVWGGFSAKWYVSLLS-NQALLDAAWVTIR 66
Query: 73 IALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF 131
+ L+S+ +TI+GT A+ L ++ F+G+ M PLV+P++I G+SLL++F + F
Sbjct: 67 VGLLSATFATILGTMAALTLVRYTRFRGRMLFSGMVYAPLVMPEVITGLSLLLLFVAIGF 126
Query: 132 KLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPA 191
G TI +AHTT + +V +V SRL FD SI EAA DLGA +T ++ +P++ PA
Sbjct: 127 DRGFWTITLAHTTLTMCFVAVVVQSRLLSFDQSIEEAAQDLGAPPVRTFFEITLPIISPA 186
Query: 192 IISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
+ S +++A TLS DD VI F SGPG++TLP++IYS +RLGV+P +NA+ ILI I
Sbjct: 187 VFSGWILAFTLSLDDLVIASFTSGPGATTLPMKIYSQVRLGVTPEINAICTILIAI 242
>gi|126665311|ref|ZP_01736293.1| spermidine/putrescine ABC transporter membrane protein
[Marinobacter sp. ELB17]
gi|126629939|gb|EBA00555.1| spermidine/putrescine ABC transporter membrane protein
[Marinobacter sp. ELB17]
Length = 255
Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats.
Identities = 100/231 (43%), Positives = 160/231 (69%), Gaps = 2/231 (0%)
Query: 27 LPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIG 85
+P+ VLV++SFN+ + G W G SLRWY+ LF ++ + KA S+F+AL ++ VST+IG
Sbjct: 18 IPIAVLVVFSFNNSRTGYSWGGLSLRWYESLF-NNYAMMKALGNSLFLALTAATVSTLIG 76
Query: 86 TFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTF 145
A+AL + F+GKK LK M + ++ P+I++ +SLL +F +LG +++ +AH TF
Sbjct: 77 ALTALALHRYRFRGKKALKGMLFVVMMSPEIVLAISLLGLFLLAGIQLGYVSLLLAHVTF 136
Query: 146 NIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFD 205
+P+V+ V++RL FD + EAA DLGA++ V+IP+++PA+++ +L+ TLS D
Sbjct: 137 CLPFVVITVMARLSGFDERLPEAARDLGASDFTMTRTVLIPVIMPALLAGWLLGFTLSMD 196
Query: 206 DFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTK 256
D V++ FVSGP LPLRIYSM+R+G+ P VNAL +L+V S+++ L ++
Sbjct: 197 DVVVSTFVSGPSYEILPLRIYSMVRVGLKPEVNALGTLLLVFSLVMLLLSQ 247
>gi|119483301|ref|ZP_01618715.1| Binding-protein-dependent transport systems inner membrane
component [Lyngbya sp. PCC 8106]
gi|119458068|gb|EAW39190.1| Binding-protein-dependent transport systems inner membrane
component [Lyngbya sp. PCC 8106]
Length = 284
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 106/248 (42%), Positives = 151/248 (60%), Gaps = 4/248 (1%)
Query: 4 MSNNLNRRKTSFIIFILAMIFFY--LPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHS 60
M + + K S+ + + ++FFY LP+ VL YSFN + W GF+L WY +LF+ +
Sbjct: 18 MRDTKPKLKVSWQVIFVGLMFFYMYLPIFVLTFYSFNKSRYSAGWQGFTLEWYTKLFQDT 77
Query: 61 NNIWKAFYYSIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGV 120
I A S+ +A + VS +IGT A+ L F F+GK + +S LPL+VPDI I V
Sbjct: 78 R-ILSALQNSVIVAFSAVGVSAVIGTLMAVGLARFRFRGKSLYQGVSYLPLIVPDIAIAV 136
Query: 121 SLLIMFATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTL 180
S L+ A + L I TI AH F + YV +V +RL + + + EAA DLGAT +
Sbjct: 137 STLVFLAAVAIPLSIWTIVSAHIVFCLAYVALVVSTRLADLNPHLEEAALDLGATPVEAF 196
Query: 181 TKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL 240
+V++P L+P I+S L+A LS DDF+I F +G G++TLP+ I+S IR GV P +NAL
Sbjct: 197 IQVLLPELMPGILSGCLLAFVLSMDDFLIASFTAGSGATTLPMEIFSRIRTGVKPDINAL 256
Query: 241 SVILIVIS 248
SVILI+ S
Sbjct: 257 SVILIIGS 264
>gi|116184830|ref|ZP_01474755.1| hypothetical protein VEx2w_02002692 [Vibrio sp. Ex25]
Length = 247
Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 101/246 (41%), Positives = 170/246 (69%), Gaps = 2/246 (0%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F YLP++VL++ SFN K GM W GF+ +WY+ L +++++ +A ++S+ +A+ S+
Sbjct: 3 LVYAFLYLPIVVLIVNSFNANKFGMKWGGFTTKWYETLV-NNDSLMQAAWHSLNVAVFSA 61
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
+TIIG+ A+AL + FKGK + M + ++ PDI++ +SLL +F L +LG T+
Sbjct: 62 TAATIIGSLTAVALFRYSFKGKGAVNGMLFVVMMSPDIVMAISLLALFLVLGAQLGFFTL 121
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
IAH TF +P+V+ V SRL+ FD ++EAA DLGA+ L ++I+P+ PA+ + +L+
Sbjct: 122 LIAHITFCLPFVVVTVYSRLNGFDVKMLEAAKDLGASEWVILKQIILPLAKPAVAAGWLL 181
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKL 258
+ TLS DD +I+ FV+GP LPL+IYSM+++G+SP VNAL+ +++V+S++L + ++ L
Sbjct: 182 SFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLILVVISQLL 241
Query: 259 QKNFIK 264
+ +K
Sbjct: 242 AREKVK 247
>gi|90419924|ref|ZP_01227833.1| permease protein, ABC-type spermidine/putrescine transporter
[Aurantimonas sp. SI85-9A1]
gi|90335965|gb|EAS49713.1| permease protein, ABC-type spermidine/putrescine transporter
[Aurantimonas sp. SI85-9A1]
Length = 273
Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 99/231 (42%), Positives = 155/231 (67%), Gaps = 3/231 (1%)
Query: 19 ILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALIS 77
+ F YLP+++LVIYSFN + + VW GFS WY+EL+ + + A + ++ +AL+S
Sbjct: 14 VFGFAFLYLPILLLVIYSFNASRLVTVWAGFSTVWYRELW-NDQALLDAAWVTLRVALLS 72
Query: 78 SLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGII 136
+ ++TI+GT A L ++FDF+G+ M PLV+P++I G+SLL++F + F G
Sbjct: 73 ASIATILGTLAATTLVRFFDFRGRLLFAGMVYAPLVMPEVITGLSLLLLFVAMDFDRGFW 132
Query: 137 TIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAF 196
T+ IAH TF++ +V +V SRL FD S+ EAA DLG +T + +P++ PA+ + +
Sbjct: 133 TVTIAHITFSMCFVAVVVQSRLISFDRSLEEAAQDLGCPPWKTFFLITMPVIWPAVAAGW 192
Query: 197 LMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
++A TLS DD VI F SGPG++TLP++IYS +RLGV+P +NA+ +LI +
Sbjct: 193 MLAFTLSLDDLVIASFTSGPGATTLPMKIYSQVRLGVTPKINAVCTLLIAV 243
>gi|152979402|ref|YP_001345031.1| Ornithine carbamoyltransferase [Actinobacillus succinogenes 130Z]
gi|150841125|gb|ABR75096.1| Ornithine carbamoyltransferase [Actinobacillus succinogenes 130Z]
Length = 256
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 106/247 (42%), Positives = 165/247 (66%), Gaps = 3/247 (1%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFN-DGKGMVWNGFSLRWYKELFKHSNNIWKA 66
+NR +F +F++ + Y+P+ +LV SFN D G+ W GFS WY+ LF + I +A
Sbjct: 1 MNRMLRNFFMFVV-YAYLYIPIFILVGNSFNGDRYGLSWKGFSWNWYERLFSNDTLI-QA 58
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMF 126
+S+ IA + + ++T+IG+ AIAL + F+GK+ + M + ++ PDI++ VSLL +F
Sbjct: 59 AIHSVVIAFVGATLATVIGSLTAIALYRYKFRGKQAVSGMLFVVMMSPDIVMAVSLLALF 118
Query: 127 ATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIP 186
+ LG ++ +AH TF +PYV+ V SRL FD ++EAA DLGA+ L K+I+P
Sbjct: 119 MIVGISLGFWSLLLAHVTFCLPYVVVSVFSRLKGFDIRMLEAARDLGASEVTILRKIILP 178
Query: 187 MLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIV 246
+ LPAI+S +L++ TLS DD V++ FVSG LPL+IYS+++ GV+P VNAL+ I+IV
Sbjct: 179 LALPAIVSGWLLSFTLSLDDVVVSSFVSGASYEILPLKIYSLVKTGVTPEVNALATIMIV 238
Query: 247 ISILLTL 253
+S+LL +
Sbjct: 239 LSLLLVM 245
>gi|149911833|ref|ZP_01900435.1| putative spermidine/putrescine ABC transporter, permease protein
[Moritella sp. PE36]
gi|149805086|gb|EDM65110.1| putative spermidine/putrescine ABC transporter, permease protein
[Moritella sp. PE36]
Length = 256
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 103/253 (40%), Positives = 169/253 (66%), Gaps = 2/253 (0%)
Query: 10 RRKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFY 68
+R S ++ + I+ Y P+ +L+ SFN K G+ W GF+ +WY EL +++ + +A +
Sbjct: 3 KRHISKVLLLFVYIYLYTPIFILIGNSFNGSKYGLKWKGFTTKWY-ELLWNNDTLLQAAF 61
Query: 69 YSIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFAT 128
SI IA+ +S ++ +IGT GA+AL FKGKK++ + + ++ PDI++ +SLL +F
Sbjct: 62 NSITIAVFASSIAVVIGTLGAVALFKHQFKGKKFISGLLFVVMMSPDIVMAISLLALFII 121
Query: 129 LKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPML 188
L LG +T+ IAH TF IP+V+ V SRL FD +I++A DLGA+ ++I+P+
Sbjct: 122 LGLDLGFVTLLIAHITFCIPFVVITVYSRLSNFDNAILDAGKDLGASEATIFRRIILPIA 181
Query: 189 LPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVIS 248
PAII+++L++ TLS DD +++ FV+GP LPL+IYSM+++GVSP VNAL+ ++I+IS
Sbjct: 182 KPAIIASWLLSFTLSLDDVIVSSFVTGPSFEVLPLKIYSMVKVGVSPEVNALATVMILIS 241
Query: 249 ILLTLSTKKLQKN 261
I ++ + K+
Sbjct: 242 ISFVVAAGLVNKS 254
>gi|46446507|ref|YP_007872.1| probable spermidine/putrescine transport system permease, component
of ATP-transporter system [Candidatus Protochlamydia
amoebophila UWE25]
gi|46400148|emb|CAF23597.1| probable spermidine/putrescine transport system permease, component
of ATP-transporter system [Candidatus Protochlamydia
amoebophila UWE25]
Length = 255
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 105/254 (41%), Positives = 171/254 (67%), Gaps = 2/254 (0%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKA 66
+ + SF I + +IF Y+P++VL+I SFND + G W GF+ +WY L+ + + +W A
Sbjct: 1 MKKSPLSFWITVFVLIFLYVPILVLIINSFNDSRFGGQWVGFTYKWYDRLW-NEHKMWYA 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMF 126
S+ + + +++VST +GT A AL + K + + + PL++PDI+ G+SLL+ F
Sbjct: 60 LRNSLIVGVSATIVSTFLGTCAAFALHLYKSKLQNFHYGLIYTPLLIPDILTGISLLLFF 119
Query: 127 ATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIP 186
T+ KLG+ T+FIAHTTF + YV ++LS+L FD++++EAA DLGA + K+++P
Sbjct: 120 VTVNVKLGLFTVFIAHTTFCMSYVTMVMLSKLQNFDFTLIEAAQDLGANTWTLIKKILLP 179
Query: 187 MLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIV 246
+L P +++ L+A LS DDFVITFFV+G G TLP+ +Y+MI+ G +P+VNALSV+++
Sbjct: 180 LLAPGLMTGALLAFILSIDDFVITFFVAGQGVLTLPVYVYNMIKFGSTPIVNALSVLILG 239
Query: 247 ISILLTLSTKKLQK 260
++ + T++L K
Sbjct: 240 VTFVFIFFTQRLSK 253
>gi|153816189|ref|ZP_01968857.1| hypothetical protein RUMTOR_02437 [Ruminococcus torques ATCC 27756]
gi|145846524|gb|EDK23442.1| hypothetical protein RUMTOR_02437 [Ruminococcus torques ATCC 27756]
Length = 603
Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats.
Identities = 90/220 (40%), Positives = 141/220 (64%), Gaps = 2/220 (0%)
Query: 33 VIYSFNDGKGMV-WNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIA 91
++ SFN+ K WNGF+ +WY +LF+ + +I A Y ++ IA +S+L++T+IGT A+
Sbjct: 1 MVLSFNNTKTRSKWNGFTGKWYLQLFQ-NKDIMNALYTTLIIAFLSALIATLIGTAAALG 59
Query: 92 LKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVL 151
++ K + L ++ +P++ DI+ G+SL+++F +F LG TI +AH TFNIPYV+
Sbjct: 60 IQAMRTKARTLLLGVTNIPMLNADIVTGISLMLLFIACRFTLGFSTILLAHITFNIPYVI 119
Query: 152 FIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITF 211
V+ +L + EAA DLGA+ KV++P ++P I S FL+A T+S DDFVIT
Sbjct: 120 LSVMPKLKQTSKRTYEAALDLGASPSYAFRKVVLPDIMPGIFSGFLLAFTMSLDDFVITH 179
Query: 212 FVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILL 251
F GPG TL +IYS +R G+ P + ALS I+ + ++L
Sbjct: 180 FTKGPGIDTLSTKIYSEVRKGIKPEMYALSTIMFLTVLIL 219
>gi|92116802|ref|YP_576531.1| binding-protein-dependent transport systems inner membrane
component [Nitrobacter hamburgensis X14]
gi|91799696|gb|ABE62071.1| binding-protein-dependent transport systems inner membrane
component [Nitrobacter hamburgensis X14]
Length = 272
Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 107/243 (44%), Positives = 157/243 (64%), Gaps = 7/243 (2%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L + F YLP++VLVIYSFN + + VW G+SLRWY E F + + A S+ + +S+
Sbjct: 19 LGLAFLYLPIVVLVIYSFNASRLVTVWGGWSLRWYFEFF-NDAAMLSAAAMSLRVGAVSA 77
Query: 79 LVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
+TI+GTF A+AL D F+G+ M PLV+P++I G+SLL++F + + G T
Sbjct: 78 TAATILGTFAAVALTRADNFRGRTLFSGMLYAPLVMPEVITGLSLLLLFVAVDAERGFWT 137
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
+ IAHTT + +V +V SRL D S+ EAA DLG + KV +P++LP+I + ++
Sbjct: 138 VTIAHTTLTMCFVAVVVQSRLGSLDRSLEEAAMDLGCDPLRAFVKVTLPLILPSIAAGWM 197
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI----VISILLTL 253
+A TLS DD VI F +GPGS+TLP+RIYS +RLGV P VNA+ ++I V+ I +L
Sbjct: 198 LAFTLSLDDLVIASFTTGPGSTTLPIRIYSEVRLGVKPEVNAICTLIIGLLAVVIIAASL 257
Query: 254 STK 256
++K
Sbjct: 258 ASK 260
>gi|17402697|gb|AAL38941.1|AF325834_3 PotC [Salmonella enterica]
Length = 259
Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 95/242 (39%), Positives = 170/242 (70%), Gaps = 2/242 (0%)
Query: 24 FFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVST 82
+ Y+P+I+LV+ SFN + G+ W GF+ +WY EL +++++ +A +S+ +A+ S+ +T
Sbjct: 17 YLYIPIIILVVNSFNSSRFGINWQGFTTKWY-ELLVNNDSLLQAAQHSLTMAIFSATFAT 75
Query: 83 IIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAH 142
+IG+ A+AL + F+GK ++ M + ++ PDI++ +SLL++F L +LG ++ +H
Sbjct: 76 MIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSH 135
Query: 143 TTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTL 202
TF +P+V+ V SRL FD ++EAA DLGA+ L K+I+P+ +PA+ + +L++ TL
Sbjct: 136 ITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTL 195
Query: 203 SFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNF 262
S DD V++ FV+GPG LPL+IYSM+++GVSP VNAL+ L+V+S+++ ++++ + ++
Sbjct: 196 SMDDVVVSSFVTGPGYEILPLKIYSMVKVGVSPEVNALATALLVLSLVMVIASQLIARDK 255
Query: 263 IK 264
K
Sbjct: 256 TK 257
>gi|126729924|ref|ZP_01745736.1| putrescine ABC transporter, permease protein [Sagittula stellata
E-37]
gi|126709304|gb|EBA08358.1| putrescine ABC transporter, permease protein [Sagittula stellata
E-37]
Length = 272
Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 104/229 (45%), Positives = 154/229 (67%), Gaps = 3/229 (1%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F YLP++VLVIYSFN + + VW GFS +WY ELF+ A + ++ +A SS
Sbjct: 14 LGFAFLYLPMVVLVIYSFNASRLVTVWAGFSTQWYAELFR-DQEFLDAAWVTLRVAFFSS 72
Query: 79 LVSTIIGTFGA-IALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
++T++GT A + ++ F+G+ M PLV+P++I G+SLL++F + G++T
Sbjct: 73 TIATVLGTMAAHVLIRTGRFRGRTLFSGMIYAPLVMPEVITGLSLLLLFIGIGLDRGVLT 132
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
+ +AHTTF + YV +V SRL FD ++ EAA DLGAT + V +P++ PA+IS +L
Sbjct: 133 VVLAHTTFAMCYVSVVVSSRLATFDTALEEAALDLGATPFEAFRLVTLPIIAPAVISGWL 192
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIV 246
+A TLS DD VI F +GPG++TLP++I+S +RLGVSP +NALS +LIV
Sbjct: 193 LAFTLSLDDLVIASFTTGPGATTLPIKIFSAVRLGVSPQINALSTLLIV 241
>gi|110803872|ref|YP_699247.1| spermidine/putrescine ABC transporter, permease protein (potC)-like
protein [Clostridium perfringens SM101]
gi|110684373|gb|ABG87743.1| spermidine/putrescine ABC transporter, permease protein (potC)-like
protein [Clostridium perfringens SM101]
Length = 266
Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 106/247 (42%), Positives = 157/247 (63%), Gaps = 6/247 (2%)
Query: 18 FILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALI 76
IL IF Y P++ L+I+SFN K M VW GF+ WY L + ++ I A YY+I IA+I
Sbjct: 14 LILVFIFLYAPIVTLMIFSFNKTKSMAVWGGFTFDWYSSLLE-NDRIISALYYTILIAVI 72
Query: 77 SSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFAT----LKFK 132
+S+++T+IGT AI + + L N++ LP++ PDI+ G+SL+ +FA K
Sbjct: 73 ASVIATVIGTISAIGINNMKKGPRTLLLNVNYLPVLNPDIVTGISLMTLFAIGGVLFNLK 132
Query: 133 LGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAI 192
G T+ +AH TF+IPYV+ VL +L + ++ +AA DLGA L KV+IP ++P I
Sbjct: 133 PGFWTMLLAHITFDIPYVILSVLPKLRQLPPNLTDAALDLGAKPSYALRKVVIPQIMPGI 192
Query: 193 ISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLT 252
+ FL+A T+S DDFVI+FF +GPG S L + IYSM R G+SP +NALS ++ ++ + L
Sbjct: 193 AAGFLIAFTMSIDDFVISFFTTGPGVSNLSIEIYSMARRGISPEINALSTLMFIVVLALL 252
Query: 253 LSTKKLQ 259
L + Q
Sbjct: 253 LIANRKQ 259
>gi|109649372|ref|ZP_01373260.1| binding-protein-dependent transport systems inner membrane
component [Desulfitobacterium hafniense DCB-2]
gi|109639548|gb|EAT49106.1| binding-protein-dependent transport systems inner membrane
component [Desulfitobacterium hafniense DCB-2]
Length = 258
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 106/244 (43%), Positives = 163/244 (66%), Gaps = 3/244 (1%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F Y P+++L+I+SFND K W+GF+LRWY ELF+ I A YY++ +A+++S
Sbjct: 7 LIFFFLYAPILILMIFSFNDSKSRGNWDGFTLRWYIELFQ-DGQIASALYYTLVVAILAS 65
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
L++T+IGT AI + K N++ LP++ PDI++G+SL+++F +KFKLG IT+
Sbjct: 66 LIATLIGTLAAIGINNMHGFPKVITLNVTYLPMLSPDIVMGISLMLLFIFIKFKLGFITM 125
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
AH TFN+P+V+F VL +L + + AA DLGAT + KVI+P + P I++ FL+
Sbjct: 126 LFAHITFNLPFVIFSVLPKLRQLNDDTYAAALDLGATPFEAYKKVILPQISPGIVTGFLL 185
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA-LSVILIVISILLTLSTKK 257
A T+S DDFV++FF +G G S L + IYSM R G++P +NA L+++ I I I+L +
Sbjct: 186 AFTMSIDDFVVSFFTTGSGVSNLAITIYSMARRGINPKINALLTLMFIFIMIILVFVNYR 245
Query: 258 LQKN 261
+ K+
Sbjct: 246 MAKD 249
>gi|125973266|ref|YP_001037176.1| binding-protein-dependent transport systems inner membrane
component [Clostridium thermocellum ATCC 27405]
gi|125713491|gb|ABN51983.1| binding-protein-dependent transport systems inner membrane
component [Clostridium thermocellum ATCC 27405]
Length = 264
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 96/228 (42%), Positives = 151/228 (66%), Gaps = 2/228 (0%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGMV-WNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L M+F Y P++ L+++SFND K W GF+L+WYK + + I K+ YY++ IAL+++
Sbjct: 13 LIMLFLYAPILTLIVFSFNDSKSRAKWGGFTLKWYKNML-NDPMISKSIYYTLLIALLAA 71
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
++ST+IGT AI + K K + N++ LP++ PDI+ G++ ++ F + KLG ++
Sbjct: 72 VISTVIGTLAAIGIHVMKKKTKTVVLNVTYLPVLNPDIVTGIAFMLFFVAIGLKLGFTSM 131
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
IAH TFNIPYV+ +L +L + EAA DLGA Q + KVIIP ++P II+ FL+
Sbjct: 132 LIAHITFNIPYVILNILPKLSSLNKYTYEAALDLGAHPMQAIWKVIIPEIMPNIITGFLL 191
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIV 246
A TLS DDF+I++F +G G + L + IY+M R G+ P +NA+S ++ +
Sbjct: 192 AFTLSLDDFIISYFTTGSGVTNLSITIYTMTRRGIKPEINAVSTVMFL 239
>gi|75675201|ref|YP_317622.1| Binding-protein-dependent transport systems inner membrane
component [Nitrobacter winogradskyi Nb-255]
gi|74420071|gb|ABA04270.1| Binding-protein-dependent transport systems inner membrane
component [Nitrobacter winogradskyi Nb-255]
Length = 273
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 103/248 (41%), Positives = 159/248 (64%), Gaps = 11/248 (4%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L + F YLP+++LVIYSFN + + VW G+SLRWY E F + + A S+ +A +S+
Sbjct: 20 LGLAFLYLPIVILVIYSFNASRLVTVWGGWSLRWYVEFF-NDEAMLSALAMSLRVAAMSA 78
Query: 79 LVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
+TI+GT A+AL + F G+ M PLV+P++I G+SLL++F + + G T
Sbjct: 79 TAATILGTLAAVALTRAGSFHGRTLFSGMLYAPLVMPEVITGLSLLLLFVAVDAQRGFWT 138
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
+ IAHTT + +V +V SRL D S+ EAA DLG KV +P++LP++++ ++
Sbjct: 139 VTIAHTTLTMCFVTVVVQSRLGSLDRSLEEAAMDLGCDPFWAFVKVTLPLILPSVVAGWM 198
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA--------LSVILIVISI 249
+A TLS DD VI F +GPGS+TLP+RIYS +RLGV P +NA ++V+++V S+
Sbjct: 199 LAFTLSMDDVVIASFTTGPGSTTLPIRIYSEVRLGVKPEINAICTLIVGSIAVVIVVASL 258
Query: 250 LLTLSTKK 257
+ LS+++
Sbjct: 259 VSKLSSRQ 266
>gi|24372854|ref|NP_716896.1| polyamine ABC transporter, permease protein [Shewanella oneidensis
MR-1]
gi|24346962|gb|AAN54341.1|AE015571_4 polyamine ABC transporter, permease protein [Shewanella oneidensis
MR-1]
Length = 271
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 110/250 (44%), Positives = 164/250 (65%), Gaps = 10/250 (4%)
Query: 14 SFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIF 72
S ++ ++F Y P+++LVIYSFN+ K + VW GFS +WY ELFK I A + S+
Sbjct: 7 SSVMLWFGLLFLYAPMLILVIYSFNESKLVTVWGGFSPKWYGELFK-DQQILDAVWTSLR 65
Query: 73 IALISSLVSTIIGTFGAIALKWFDFK-GKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF 131
IA SS ++ IIGT A + F K L NM PLV+P++I G+SLL++F +
Sbjct: 66 IAFYSSTMAVIIGTMAAFVMTRFKRSWAKLTLSNMITAPLVMPEVITGLSLLLLFVHMAD 125
Query: 132 KLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVII 185
LG ++T++IAH+TF YV +V SRL E D SI EAA DLGAT +T + +
Sbjct: 126 LLGWPKERGMVTVWIAHSTFCAAYVAVVVSSRLRELDRSIEEAAMDLGATPLKTFFLITV 185
Query: 186 PMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
PM+ PA+++ +L++ +LS DD VI+ F SGPG++TLP+ ++S +RLGVSP +NAL+ ++I
Sbjct: 186 PMISPALVAGWLLSFSLSLDDLVISSFASGPGATTLPMVVFSSVRLGVSPKINALATLII 245
Query: 246 V-ISILLTLS 254
+ +S++ LS
Sbjct: 246 LCVSLIAFLS 255
>gi|94987273|ref|YP_595206.1| ABC-type spermidine/putrescine transport system, permease component
II [Lawsonia intracellularis PHE/MN1-00]
gi|94731522|emb|CAJ54885.1| ABC-type spermidine/putrescine transport system, permease component
II [Lawsonia intracellularis PHE/MN1-00]
Length = 258
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 107/244 (43%), Positives = 159/244 (65%), Gaps = 2/244 (0%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGMV-WNGFSLRWYKELFKHSNNIWKAFYY 69
++ I + IF YLP+IV++ YSFN K W GF+L+WY +L ++ I A
Sbjct: 2 KRLGLIWLWIVYIFLYLPIIVVIGYSFNIAKYTSDWKGFTLQWYSQLMNNTPLI-DAGIN 60
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
S+ +A +S+ ST +G A+A++ + F G+K L + V PDI++G+SLLI F
Sbjct: 61 SLSVAALSASFSTFLGVLTALAIRRYRFPGRKILYGSIYVLTVSPDIVMGISLLIFFIFF 120
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
LG +++FIAHTT ++P+V+ VL+RL EFD +VEAA DLGA Q VI+P+++
Sbjct: 121 HIPLGFLSLFIAHTTLSLPFVVLTVLTRLMEFDEQLVEAARDLGANESQAFRYVILPLIM 180
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
PAI++ +L+A TLS DD +I+FFV+GP LPL+IYSM+RLGV P +NALS I+ I++
Sbjct: 181 PAIVAGWLLAFTLSMDDVLISFFVTGPTFEILPLKIYSMVRLGVKPEINALSAIMFCITV 240
Query: 250 LLTL 253
+
Sbjct: 241 VFVF 244
>gi|134096009|ref|YP_001101084.1| spermidine/putrescine transport protein (ABC superfamily,
membrane). Putative conserved domain: IPR000515
(Binding-protein-dependent transport systems inner
membrane component) [Herminiimonas arsenicoxydans]
gi|133739912|emb|CAL62963.1| spermidine/putrescine transport protein (ABC superfamily,
membrane). Putative conserved domain: IPR000515
(Binding-protein-dependent transport systems inner
membrane component) [Herminiimonas arsenicoxydans]
Length = 258
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 103/244 (42%), Positives = 159/244 (65%), Gaps = 5/244 (2%)
Query: 19 ILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALIS 77
+L F Y+PL ++V+YSFND + W GF+L WY+ LF + +A S+ IAL+S
Sbjct: 15 VLVYAFLYVPLAIVVMYSFNDSRLNAEWVGFTLDWYRVLFA-DEEMLRAAGNSLIIALVS 73
Query: 78 SLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
S VST++GT AL + + L+ + + P+ +P+I++GVSLLI F L LG+++
Sbjct: 74 SAVSTVLGTMAGFALHRYKIRT---LQILVLTPIAIPEILVGVSLLIFFVMLNITLGMLS 130
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
+ +AH F++ +V +V SRL D S+ EAA D GAT Q +V +P+++P +++ L
Sbjct: 131 VMLAHIAFSLGFVAIVVRSRLSGMDESLTEAARDCGATPWQAFRRVTLPLIMPGVVAGAL 190
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKK 257
MA TLS DDFVITFF +G + TLPL+IYSMI++ V+P VNA+S +L+ ++++L + K
Sbjct: 191 MAFTLSIDDFVITFFTAGANTQTLPLQIYSMIKIAVTPEVNAVSTLLMALTLILIVIASK 250
Query: 258 LQKN 261
L N
Sbjct: 251 LSPN 254
>gi|15641437|ref|NP_231069.1| spermidine/putrescine ABC transporter membrane component [Vibrio
cholerae O1 biovar eltor str. N16961]
gi|121590939|ref|ZP_01678260.1| spermidine/putrescine ABC transporter, permease protein [Vibrio
cholerae 2740-80]
gi|147673527|ref|YP_001216983.1| spermidine/putrescine ABC transporter, permease protein [Vibrio
cholerae O395]
gi|153221136|ref|ZP_01952171.1| spermidine/putrescine ABC transporter, permease protein [Vibrio
cholerae MAK 757]
gi|153827257|ref|ZP_01979924.1| spermidine/putrescine ABC transporter, permease protein [Vibrio
cholerae MZO-2]
gi|9655924|gb|AAF94583.1| spermidine/putrescine ABC transporter, permease protein [Vibrio
cholerae O1 biovar eltor str. N16961]
gi|121547214|gb|EAX57339.1| spermidine/putrescine ABC transporter, permease protein [Vibrio
cholerae 2740-80]
gi|124119840|gb|EAY38583.1| spermidine/putrescine ABC transporter, permease protein [Vibrio
cholerae MAK 757]
gi|146315410|gb|ABQ19949.1| spermidine/putrescine ABC transporter, permease protein [Vibrio
cholerae O395]
gi|149738837|gb|EDM53177.1| spermidine/putrescine ABC transporter, permease protein [Vibrio
cholerae MZO-2]
gi|150423796|gb|EDN15737.1| spermidine/putrescine ABC transporter, permease protein [Vibrio
cholerae AM-19226]
Length = 256
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 104/255 (40%), Positives = 173/255 (67%), Gaps = 2/255 (0%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYY 69
R F L +F YLP+IVL+ SFN+ K G+ W GF+ +WY L +++++ +A ++
Sbjct: 3 RSIRFSFMSLVYLFLYLPIIVLIANSFNENKFGIKWGGFTTKWYHALM-NNDSLMQAAWH 61
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
SI +A+ S+ +T+IG+ A+AL + FKGKK + M + ++ PDI++ +SLL +F +
Sbjct: 62 SINVAVFSATAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVM 121
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
KLG T+ IAH TF +P+V+ V +RL+ FD ++EAA DLGA L K+I+P+
Sbjct: 122 GAKLGFFTLLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAK 181
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
PA+ + +L++ TLS DD +I+ FV+GP LPL+IYSM+++G+SP VNAL+ +++V+S+
Sbjct: 182 PAVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSL 241
Query: 250 LLTLSTKKLQKNFIK 264
+L ++++ L + +K
Sbjct: 242 VLVVASQLLAREKVK 256
>gi|153896817|ref|ZP_02017385.1| binding-protein-dependent transport systems inner membrane
component [Methylobacterium extorquens PA1]
gi|156448615|ref|ZP_02054999.1| Ornithine carbamoyltransferase [Methylobacterium chloromethanicum
CM4]
gi|151591667|gb|EDN55073.1| binding-protein-dependent transport systems inner membrane
component [Methylobacterium extorquens PA1]
gi|156192131|gb|EDO24316.1| Ornithine carbamoyltransferase [Methylobacterium chloromethanicum
CM4]
Length = 259
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 104/241 (43%), Positives = 152/241 (63%), Gaps = 3/241 (1%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
LA+ F Y P++VLV YSFND K + VW GFS RWY LF+ I A S+ +A++S+
Sbjct: 11 LALAFLYAPILVLVAYSFNDSKLVTVWGGFSTRWYGVLFRDGPLIASALV-SLKVAVLSA 69
Query: 79 LVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
++ ++GT A+AL + F G+ + P+V+P++I G+SLL++F + GI T
Sbjct: 70 AIAGVLGTCAALALDRHGRFWGRGAYTGLLYAPMVMPEVITGLSLLLLFVGIGLDRGIAT 129
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
+ IAH TF +V +V +RL D S+ EAA DLGA + + +P++ P++ + FL
Sbjct: 130 LVIAHATFATGFVAVVVGARLKGLDRSLEEAAADLGAGPARVFFGITLPLIAPSVAAGFL 189
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKK 257
+A TLS DD VI FVSGPG++TLP+RIYS +RLGV+P +NA S +LI L+ L
Sbjct: 190 LAFTLSLDDLVIASFVSGPGATTLPMRIYSQVRLGVNPEINAASTLLIAAVGLVVLGASW 249
Query: 258 L 258
L
Sbjct: 250 L 250
>gi|18310952|ref|NP_562886.1| probable spermidine/putrescine ABC transporter [Clostridium
perfringens str. 13]
gi|18145634|dbj|BAB81676.1| probable spermidine/putrescine ABC transporter [Clostridium
perfringens str. 13]
Length = 266
Score = 174 bits (440), Expect = 6e-42, Method: Composition-based stats.
Identities = 105/245 (42%), Positives = 156/245 (63%), Gaps = 6/245 (2%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L IF Y P++ L+I+SFN K M VW GF+ WY L + ++ I A YY++ IA+I+S
Sbjct: 16 LVFIFLYAPIVTLMIFSFNKTKSMAVWGGFTFDWYSSLLE-NDRIIAALYYTVLIAVIAS 74
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFAT----LKFKLG 134
+V+T+IGT AI + + L N++ LP++ PDI+ G+SL+ +FA K G
Sbjct: 75 VVATVIGTISAIGINNMKKGPRTLLLNVNYLPVLNPDIVTGISLMTLFAIGGVLFNLKPG 134
Query: 135 IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIIS 194
T+ +AH TF+IPYV+ VL +L + ++ +AA DLGA L KV+IP ++P I +
Sbjct: 135 FWTMLLAHITFDIPYVILSVLPKLRQLPPNLTDAALDLGAKPSYALRKVVIPQIIPGIAA 194
Query: 195 AFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLS 254
FL+A T+S DDFVI+FF +GPG S L + IYSM R G+SP +NALS ++ ++ + L L
Sbjct: 195 GFLIAFTMSIDDFVISFFTTGPGVSNLSIEIYSMARRGISPEINALSTLMFIVVLALLLI 254
Query: 255 TKKLQ 259
+ Q
Sbjct: 255 ANRKQ 259
>gi|89894209|ref|YP_517696.1| hypothetical protein DSY1463 [Desulfitobacterium hafniense Y51]
gi|89333657|dbj|BAE83252.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 263
Score = 174 bits (440), Expect = 7e-42, Method: Composition-based stats.
Identities = 105/244 (43%), Positives = 163/244 (66%), Gaps = 3/244 (1%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F Y P+++L+I+SFND K W+GF+LRWY ELF+ I A YY++ +A+++S
Sbjct: 12 LIFFFLYAPILILMIFSFNDSKSRGNWDGFTLRWYIELFQ-DGQIASALYYTLVVAILAS 70
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
L++T+IGT AI + K N++ LP++ PDI++G+SL+++F +KFKLG IT+
Sbjct: 71 LIATLIGTLAAIGINNMHGFPKVVTLNVTYLPMLSPDIVMGISLMLLFIFIKFKLGFITM 130
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
AH TFN+P+V+F VL +L + + AA DLGAT + KVI+P + P I++ FL+
Sbjct: 131 LFAHITFNLPFVIFSVLPKLRQLNDDTYAAALDLGATPFEAYKKVILPQISPGIVTGFLL 190
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA-LSVILIVISILLTLSTKK 257
A T+S DDFV++FF +G G + L + IYSM R G++P +NA L+++ I I I+L +
Sbjct: 191 AFTMSIDDFVVSFFTTGSGVTNLAITIYSMARRGINPKINALLTLMFIFIMIILVFVNYR 250
Query: 258 LQKN 261
+ K+
Sbjct: 251 MAKD 254
>gi|37679871|ref|NP_934480.1| spermidine/putrescine ABC transporter membrane component [Vibrio
vulnificus YJ016]
gi|37198616|dbj|BAC94451.1| ABC-type spermidine/putrescine transport system, permease component
II [Vibrio vulnificus YJ016]
Length = 256
Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats.
Identities = 103/255 (40%), Positives = 171/255 (67%), Gaps = 2/255 (0%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYY 69
R F L F YLP+IVL+ SFN+ K GM W GF+ +WY L +++++ +A ++
Sbjct: 3 RTVRFSFMTLVYAFLYLPIIVLIANSFNENKFGMKWGGFTTKWYHALV-NNDSLMQAAWH 61
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
S +A+ S+ +TIIG+ A+AL + FKGK + M + ++ PDI++ +SLL +F L
Sbjct: 62 SFNVAIFSATAATIIGSLTAVALFRYQFKGKSAVNGMLFVVMMSPDIVMAISLLALFLVL 121
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
+LG T+ +AH TF +P+V+ V SRL+ FD ++EAA DLGA+ L ++I+P+
Sbjct: 122 GAQLGFFTLLVAHITFCLPFVVVTVYSRLNGFDVKMLEAAKDLGASEWVILKQIILPLAK 181
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
PA+ + +L++ TLS DD +I+ FV+GP LPL+IYSM+++G+SP VNAL+ +++V+S+
Sbjct: 182 PAVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSL 241
Query: 250 LLTLSTKKLQKNFIK 264
+L ++++ L + +K
Sbjct: 242 VLVITSQILAREKVK 256
>gi|110799954|ref|YP_696649.1| spermidine/putrescine ABC transporter, permease protein PotC
[Clostridium perfringens ATCC 13124]
gi|110674601|gb|ABG83588.1| spermidine/putrescine ABC transporter, permease protein PotC
[Clostridium perfringens ATCC 13124]
Length = 266
Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats.
Identities = 104/245 (42%), Positives = 156/245 (63%), Gaps = 6/245 (2%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L IF Y P++ L+++SFN K M VW GF+ WY L + ++ I A YY++ IA+I+S
Sbjct: 16 LVFIFLYAPIVTLMVFSFNKTKSMAVWGGFTFDWYSSLLE-NDRIIAALYYTVLIAVIAS 74
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFAT----LKFKLG 134
+V+T+IGT AI + + L N++ LP++ PDI+ G+SL+ +FA K G
Sbjct: 75 VVATVIGTISAIGINNMKKGPRTLLLNVNYLPVLNPDIVTGISLMTLFAIGGVLFNLKPG 134
Query: 135 IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIIS 194
T+ +AH TF+IPYV+ VL +L + ++ +AA DLGA L KV+IP ++P I +
Sbjct: 135 FWTMLLAHITFDIPYVILSVLPKLRQLPPNLTDAALDLGAKPSYALRKVVIPQIIPGIAA 194
Query: 195 AFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLS 254
FL+A T+S DDFVI+FF +GPG S L + IYSM R G+SP +NALS ++ ++ + L L
Sbjct: 195 GFLIAFTMSIDDFVISFFTTGPGVSNLSIEIYSMARRGISPEINALSTLMFIVVLALLLI 254
Query: 255 TKKLQ 259
+ Q
Sbjct: 255 ANRKQ 259
>gi|114564169|ref|YP_751683.1| binding-protein-dependent transport systems inner membrane
component [Shewanella frigidimarina NCIMB 400]
gi|114335462|gb|ABI72844.1| binding-protein-dependent transport systems inner membrane
component [Shewanella frigidimarina NCIMB 400]
Length = 271
Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats.
Identities = 110/241 (45%), Positives = 156/241 (64%), Gaps = 9/241 (3%)
Query: 14 SFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIF 72
S ++ + +IF Y P+++LVIYSFND K + VW GFS +WY ELF+ I A + S+
Sbjct: 7 SKVMLWVGLIFLYAPMLILVIYSFNDSKLVTVWGGFSPKWYGELFQ-DQQILNAVWTSLR 65
Query: 73 IALISSLVSTIIGTFGAIALKWFDFK-GKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF 131
IA SS ++ IIGT A + F K L NM PLV+P++I G+SLL++F +
Sbjct: 66 IAFYSSTMAVIIGTMAAFVMTRFRRSWAKLTLSNMITAPLVMPEVITGLSLLLLFVQMSE 125
Query: 132 KLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVII 185
G + T++IAH+TF YV +V SRL E D SI EAA DLGAT +T + I
Sbjct: 126 TFGWPTERGMFTVWIAHSTFCAAYVAVVVSSRLRELDLSIEEAAMDLGATRLKTFFLITI 185
Query: 186 PMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
PM+ P++I+ +L++ +LS DD VI F SGPGS+TLP+ ++S +RLGVSP +NAL+ I+I
Sbjct: 186 PMIAPSLIAGWLLSFSLSLDDLVIASFTSGPGSTTLPMVVFSSVRLGVSPKINALATIII 245
Query: 246 V 246
+
Sbjct: 246 L 246
>gi|120599864|ref|YP_964438.1| binding-protein-dependent transport systems inner membrane
component [Shewanella sp. W3-18-1]
gi|124546971|ref|ZP_01705976.1| binding-protein-dependent transport systems inner membrane
component [Shewanella putrefaciens 200]
gi|146292200|ref|YP_001182624.1| binding-protein-dependent transport systems inner membrane
component [Shewanella putrefaciens CN-32]
gi|120559957|gb|ABM25884.1| binding-protein-dependent transport systems inner membrane
component [Shewanella sp. W3-18-1]
gi|124509665|gb|EAY53742.1| binding-protein-dependent transport systems inner membrane
component [Shewanella putrefaciens 200]
gi|145563890|gb|ABP74825.1| binding-protein-dependent transport systems inner membrane
component [Shewanella putrefaciens CN-32]
Length = 271
Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 110/250 (44%), Positives = 163/250 (65%), Gaps = 10/250 (4%)
Query: 14 SFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIF 72
S ++ +IF Y P+++LVIYSFND K + VW GFS +WY ELF+ I A + S+
Sbjct: 7 SSVMLWFGLIFLYAPMLILVIYSFNDSKLVTVWGGFSPKWYGELFQ-DQQILDAVWTSLR 65
Query: 73 IALISSLVSTIIGTFGAIALKWFDFK-GKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF 131
IA SS ++ IIGT A + F K L NM PLV+P++I G+SLL++F +
Sbjct: 66 IAFYSSTMAVIIGTMAAFVMTRFKRSWAKLTLSNMITAPLVMPEVITGLSLLLLFVHMAD 125
Query: 132 KLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVII 185
LG ++T++IAH+TF YV +V SRL E D SI EAA DLGAT +T + +
Sbjct: 126 LLGWPRERGMVTVWIAHSTFCAAYVAVVVSSRLRELDMSIEEAAMDLGATPLKTFFLITV 185
Query: 186 PMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
P++ PA+++ +L++ +LS DD VI F SGPG++TLP+ ++S +RLGVSP +NAL+ ++I
Sbjct: 186 PIISPALMAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSVRLGVSPKINALATLII 245
Query: 246 V-ISILLTLS 254
+ +S++ LS
Sbjct: 246 LCVSLIAFLS 255
>gi|126668741|ref|ZP_01739690.1| putrescine ABC transporter, permease protein [Marinobacter sp.
ELB17]
gi|126626778|gb|EAZ97426.1| putrescine ABC transporter, permease protein [Marinobacter sp.
ELB17]
Length = 269
Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 116/270 (42%), Positives = 170/270 (62%), Gaps = 17/270 (6%)
Query: 8 LNRRKTSFIIF-ILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWK 65
+ R S +IF +L +F Y P++ LV++SFN+ + + VW GFS +WY ELF+ I
Sbjct: 1 MKRPSRSLMIFGVLGFVFLYAPILSLVVFSFNESRLVTVWGGFSTKWYGELFRDPQ-ILD 59
Query: 66 AFYYSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLI 124
A + S+ +AL S+ +S +IGT + L F F+ K L M PLV+P++IIG++LL+
Sbjct: 60 AAWVSLRVALASATLSVVIGTVASFVLVRFRRFRTKTLLSMMITAPLVMPEVIIGLALLL 119
Query: 125 MFATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQ 178
MF ++ LG I+TI IAH+TF Y I+ SRL + D SI EAA DLGA +
Sbjct: 120 MFVAMESILGWPGQRGIMTIIIAHSTFGAAYAAVIIQSRLVDMDLSIEEAALDLGAHPVR 179
Query: 179 TLTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVN 238
V +P++ PA++S +L+A TLS DD V+ FVSGPG+STLP+ I+S +RLGVSP VN
Sbjct: 180 VFFDVTLPVIAPALMSGWLLAFTLSLDDLVVASFVSGPGASTLPMVIFSKVRLGVSPDVN 239
Query: 239 ALSVIL-------IVISILLTLSTKKLQKN 261
AL+ I+ I+++ L +KK+ +N
Sbjct: 240 ALAAIIIGVASIGIIVAALQVSRSKKISQN 269
>gi|149191937|ref|ZP_01870169.1| spermidine/putrescine ABC transporter membrane protein [Vibrio
shilonii AK1]
gi|148834242|gb|EDL51247.1| spermidine/putrescine ABC transporter membrane protein [Vibrio
shilonii AK1]
Length = 256
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 99/255 (38%), Positives = 169/255 (66%), Gaps = 2/255 (0%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYY 69
R F + F YLP+IVL+ SFN K GM W G++ +WY L +++++ +A ++
Sbjct: 3 RVVRFSFMSVVYAFLYLPIIVLIANSFNANKFGMKWGGWTTKWYHALV-NNDSLMQAAWH 61
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
S+ +A+ S+ +TIIG+ A+AL + FKGK + + + ++ PDI++ +SLL +F L
Sbjct: 62 SLNVAVFSATAATIIGSLTAVALFRYQFKGKGAVSGLLFIVMMSPDIVMAISLLAIFLVL 121
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
+LG ++ IAH TF +P+V+ V SRL FD ++EAA DLGA L ++I+P+
Sbjct: 122 GAQLGFFSLLIAHITFCLPFVVVTVYSRLKGFDVKMLEAAKDLGAGEWTILKQIILPLAK 181
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
PA+ + +L++ TLS DD +++ FV+GP LPL+IYSM+++G+SP VNAL+ I++++S+
Sbjct: 182 PAVAAGWLLSFTLSLDDVIVSSFVTGPTYEILPLKIYSMVKVGISPEVNALATIMLIVSL 241
Query: 250 LLTLSTKKLQKNFIK 264
+L ++++ L + +K
Sbjct: 242 ILVVASQLLAREKVK 256
>gi|148976185|ref|ZP_01812928.1| spermidine/putrescine ABC transporter membrane protein [Vibrionales
bacterium SWAT-3]
gi|145964580|gb|EDK29834.1| spermidine/putrescine ABC transporter membrane protein [Vibrionales
bacterium SWAT-3]
Length = 256
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 103/255 (40%), Positives = 169/255 (66%), Gaps = 2/255 (0%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYY 69
R F L F YLP+IVL+ SFN K GM W GF+ +WY L +++++ +A ++
Sbjct: 3 RTVKFSFMALVYAFLYLPIIVLIANSFNANKFGMKWGGFTTKWYDALI-NNDSLMQAAWH 61
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
SI +A+ S+ +TI+G+ A+AL + FKGK + M + ++ PDI++ +SLL +F +
Sbjct: 62 SINVAVFSATAATIVGSLTAVALFRYQFKGKGVVNGMLFIVMMSPDIVMAISLLALFLVM 121
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
+LG T+ AH TF +P+V+ V SRL+ FD ++EAA DLGA+ L ++I+P+
Sbjct: 122 GVQLGFFTLLAAHITFCLPFVVVTVYSRLNGFDVKMLEAAKDLGASEWTILKQIILPLAK 181
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
PA+ + +L++ TLS DD +I+ FV+GP LPL+IYSM+++G+SP VNAL+ +++V+S+
Sbjct: 182 PAVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSL 241
Query: 250 LLTLSTKKLQKNFIK 264
+L + ++ L + IK
Sbjct: 242 VLVIISQLLAREKIK 256
>gi|86145990|ref|ZP_01064317.1| spermidine/putrescine ABC transporter, permease protein [Vibrio sp.
MED222]
gi|85836195|gb|EAQ54326.1| spermidine/putrescine ABC transporter, permease protein [Vibrio sp.
MED222]
Length = 256
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 103/255 (40%), Positives = 169/255 (66%), Gaps = 2/255 (0%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYY 69
R F L F YLP+IVL+ SFN K GM W GF+ +WY L +++++ +A ++
Sbjct: 3 RTVKFSFMALVYAFLYLPIIVLIANSFNANKFGMKWGGFTTKWYDALI-NNDSLMQAAWH 61
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
SI +A+ S+ +TI+G+ A+AL + FKGK + M + ++ PDI++ +SLL +F +
Sbjct: 62 SINVAVFSATAATIVGSLTAVALFRYQFKGKGIVNGMLFIVMMSPDIVMAISLLALFLVM 121
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
+LG T+ AH TF +P+V+ V SRL+ FD ++EAA DLGA+ L ++I+P+
Sbjct: 122 GVQLGFFTLLAAHITFCLPFVVVTVYSRLNGFDVKMLEAAKDLGASEWTILKQIILPLAK 181
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
PA+ + +L++ TLS DD +I+ FV+GP LPL+IYSM+++G+SP VNAL+ +++V+S+
Sbjct: 182 PAVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSL 241
Query: 250 LLTLSTKKLQKNFIK 264
+L + ++ L + IK
Sbjct: 242 VLVIISQLLAREKIK 256
>gi|103486603|ref|YP_616164.1| binding-protein-dependent transport systems inner membrane
component [Sphingopyxis alaskensis RB2256]
gi|98976680|gb|ABF52831.1| binding-protein-dependent transport systems inner membrane
component [Sphingopyxis alaskensis RB2256]
Length = 281
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 103/247 (41%), Positives = 156/247 (63%), Gaps = 12/247 (4%)
Query: 22 MIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLV 80
M+F Y PL+VL+I+SFND K +VW GF+ ++Y++ ++ + +A S+ IA +++L
Sbjct: 29 MVFLYAPLVVLMIFSFNDSKRNVVWRGFTTKYYEKALG-NDQLVEALVNSLTIAALATLA 87
Query: 81 STIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL--------KFK 132
S ++GT A+ L F F K + LP++VP+I +GV+ L+ FA + F
Sbjct: 88 SLVLGTLAAVMLWRFRFPWKGAIDGTISLPIIVPEICLGVAFLMFFAAIGWPNDLVWPFN 147
Query: 133 LGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAI 192
LG ITI AH TF P+V +V SRL F+ EAA DLGA+ Q V+IP + PA+
Sbjct: 148 LGAITI--AHITFCFPFVTMVVRSRLASFNREQEEAAKDLGASEWQVFRDVLIPHMKPAL 205
Query: 193 ISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLT 252
++ L++ TLS DDFVIT+F SGP + T P+++YSM+R V+P VNA S +LI+++++LT
Sbjct: 206 VAGALLSFTLSLDDFVITYFTSGPDTITFPVKVYSMVRFSVTPEVNAASTLLIILTVVLT 265
Query: 253 LSTKKLQ 259
K Q
Sbjct: 266 FVALKAQ 272
>gi|114048488|ref|YP_739038.1| binding-protein-dependent transport systems inner membrane
component [Shewanella sp. MR-7]
gi|113889930|gb|ABI43981.1| binding-protein-dependent transport systems inner membrane
component [Shewanella sp. MR-7]
Length = 271
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 109/250 (43%), Positives = 162/250 (64%), Gaps = 10/250 (4%)
Query: 14 SFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIF 72
S ++ + F Y P+++LVIYSFN+ K + VW GFS +WY ELF+ I A + S+
Sbjct: 7 SSVMLWFGLFFLYAPMLILVIYSFNESKLVTVWGGFSPKWYGELFR-DQQILDAVWTSLR 65
Query: 73 IALISSLVSTIIGTFGAIALKWFDFK-GKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF 131
IA SS ++ IIGT A + F K L NM PLV+P++I G+SLL++F +
Sbjct: 66 IAFYSSTMAVIIGTMAAFVMTRFKRSWAKLTLSNMITAPLVMPEVITGLSLLLLFVHMAD 125
Query: 132 KLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVII 185
LG ++T++IAH+TF YV +V SRL E D SI EAA DLGAT +T + +
Sbjct: 126 LLGWPKERGMVTVWIAHSTFCAAYVAVVVSSRLRELDMSIEEAAMDLGATPLKTFFLITV 185
Query: 186 PMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
PM+ PA+++ +L++ +LS DD VI F SGPG++TLP+ ++S +RLGVSP +NAL+ ++I
Sbjct: 186 PMISPALVAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSVRLGVSPKINALATLII 245
Query: 246 V-ISILLTLS 254
+ +S++ LS
Sbjct: 246 LCVSLIAFLS 255
>gi|126173352|ref|YP_001049501.1| binding-protein-dependent transport systems inner membrane
component [Shewanella baltica OS155]
gi|149116507|ref|ZP_01843230.1| binding-protein-dependent transport systems inner membrane
component [Shewanella baltica OS223]
gi|152999703|ref|YP_001365384.1| Ornithine carbamoyltransferase [Shewanella baltica OS185]
gi|125996557|gb|ABN60632.1| binding-protein-dependent transport systems inner membrane
component [Shewanella baltica OS155]
gi|146863533|gb|EDK49050.1| binding-protein-dependent transport systems inner membrane
component [Shewanella baltica OS223]
gi|151364321|gb|ABS07321.1| Ornithine carbamoyltransferase [Shewanella baltica OS185]
Length = 271
Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 109/244 (44%), Positives = 159/244 (65%), Gaps = 10/244 (4%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
+ F Y P++VLVIYSFND K + VW GFS +WY ELF+ I A + S+ IA SS
Sbjct: 13 FGLFFLYAPMLVLVIYSFNDSKLVTVWGGFSPKWYGELFQ-DQQILDAVWTSLRIAFYSS 71
Query: 79 LVSTIIGTFGAIALKWFDFK-GKKYLKNMSVLPLVVPDIIIGVSLLIMFATLK------F 131
++ IIGT A + F K L NM PLV+P++I G+SLL++F +
Sbjct: 72 TMAVIIGTMAAFVMTRFKRSWAKLTLSNMITAPLVMPEVITGLSLLLLFVHMADLFGWPK 131
Query: 132 KLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPA 191
+ G++T++IAH+TF YV +V SRL E D SI EAA DLGAT +T + +PM+ PA
Sbjct: 132 ERGMLTVWIAHSTFCAAYVAVVVSSRLRELDMSIEEAAMDLGATPLKTFFLITVPMISPA 191
Query: 192 IISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIV-ISIL 250
+++ +L++ +LS DD VI F SGPG++TLP+ ++S +RLGVSP +NAL+ ++I+ +S++
Sbjct: 192 LVAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSVRLGVSPKINALATLIILCVSLI 251
Query: 251 LTLS 254
LS
Sbjct: 252 AFLS 255
>gi|53687109|ref|ZP_00107385.2| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Nostoc punctiforme PCC 73102]
Length = 242
Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 99/229 (43%), Positives = 141/229 (61%), Gaps = 2/229 (0%)
Query: 26 YLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTII 84
YLP++VL YSFN W GF+L WY++LF + I A S+ +A + VS ++
Sbjct: 2 YLPILVLSFYSFNQSPYSATWQGFTLDWYRKLFS-DDRILSALQNSMIVAGCAVGVSAVL 60
Query: 85 GTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTT 144
GT A+ L ++F GKK + +S LPL++PDI I V+ L+ A L + TI AH
Sbjct: 61 GTLMAVGLARYEFPGKKLYRGISYLPLIIPDIAIAVATLVCLAAFAIPLSLWTIVAAHIV 120
Query: 145 FNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSF 204
F + YV +V SRL D + EAA DLGAT Q +V++P L+P I++ L+A LS
Sbjct: 121 FCLAYVGLVVASRLTNLDPHLEEAALDLGATPTQAFIQVLLPQLMPGILAGCLLAFVLSL 180
Query: 205 DDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTL 253
DDF+I+ F +G GS+TLP+ I+S IR GV P +NALSV+LI +S ++
Sbjct: 181 DDFLISSFTAGSGSNTLPMEIFSRIRTGVKPDINALSVMLISVSAIVAF 229
>gi|86139466|ref|ZP_01058035.1| putrescine ABC transporter, permease protein [Roseobacter sp.
MED193]
gi|85823969|gb|EAQ44175.1| putrescine ABC transporter, permease protein [Roseobacter sp.
MED193]
Length = 271
Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 108/246 (43%), Positives = 161/246 (65%), Gaps = 3/246 (1%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F Y+P+++LVIYSFN+ K + VW GFS +WY EL ++ + A + +I +A+ISS
Sbjct: 14 LGFAFLYVPMLILVIYSFNESKLVTVWAGFSTKWYGELMQNEAFL-SAAWVTIKVAVISS 72
Query: 79 LVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
++T++GT A L + F G+ M PLV+P++I G+SLL++F + G++T
Sbjct: 73 TIATVLGTMAAYVLVRGGRFMGRTLFSGMIYAPLVMPEVITGLSLLLLFIGIGLDRGVLT 132
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
I +AHTTF++ YV +V SRL FD S+ EAA DLG + + V +P++ PA+IS +L
Sbjct: 133 IVLAHTTFSMCYVSVVVSSRLVTFDRSLEEAALDLGCSPSEAFRLVTLPIIAPAVISGWL 192
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKK 257
+A TLS DD VI F SGP ++TLP++IYS +RLGVSP +NALS ++I I + L+
Sbjct: 193 LAFTLSLDDLVIASFTSGPAATTLPIKIYSAVRLGVSPEINALSTLMIAIVTIGVLTASL 252
Query: 258 LQKNFI 263
+ K I
Sbjct: 253 VNKRQI 258
>gi|120553284|ref|YP_957635.1| binding-protein-dependent transport systems inner membrane
component [Marinobacter aquaeolei VT8]
gi|120323133|gb|ABM17448.1| binding-protein-dependent transport systems inner membrane
component [Marinobacter aquaeolei VT8]
Length = 256
Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 96/230 (41%), Positives = 158/230 (68%), Gaps = 2/230 (0%)
Query: 28 PLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGT 86
P++VLV++SFND + G W G SLRWY+ L + + +A + S+++AL ++ VST+IG
Sbjct: 20 PIVVLVVFSFNDSRTGYEWGGLSLRWYEALLNNRAMV-QAMWNSLWLALSAATVSTLIGA 78
Query: 87 FGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFN 146
A+AL + F+GKK L M + ++ P+I++ +SLL +F + +LG +++ +AH TF
Sbjct: 79 LTALALHRYRFRGKKVLNGMLFVVMMSPEIVLAISLLALFLLVGLQLGYVSLLLAHVTFC 138
Query: 147 IPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDD 206
+P+V+ V++RL FD + EAA DLGA + V+IP+++PA+++ +L+ TLS DD
Sbjct: 139 LPFVVITVMARLSGFDERLPEAARDLGANDFTMTRTVLIPVIMPALLAGWLLGFTLSLDD 198
Query: 207 FVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTK 256
V++ FVSGP LPLRIYSM+R+G+ P VNAL +L+V S+++ + ++
Sbjct: 199 VVVSTFVSGPSYEILPLRIYSMVRVGLKPEVNALGTLLLVFSLVMLILSQ 248
>gi|149375456|ref|ZP_01893226.1| spermidine/putrescine ABC transporter membrane protein
[Marinobacter algicola DG893]
gi|149360161|gb|EDM48615.1| spermidine/putrescine ABC transporter membrane protein
[Marinobacter algicola DG893]
Length = 256
Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 96/230 (41%), Positives = 161/230 (70%), Gaps = 2/230 (0%)
Query: 28 PLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGT 86
P++VLV++SFN + G W G SL+WY+ LF +++ + +A + S+++AL ++ VSTIIG
Sbjct: 20 PILVLVVFSFNSSRTGYRWGGLSLQWYESLF-NNHAMVQAMWNSLWLALTAATVSTIIGA 78
Query: 87 FGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFN 146
A+AL + F+GK+ L+ M + ++ P+I++ +SLL +F + +LG +++ +AH TF
Sbjct: 79 LTALALHRYRFRGKRVLRGMLFVVMMSPEIVLAISLLALFLLVGLQLGFVSLLLAHVTFC 138
Query: 147 IPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDD 206
+P+V+ V++RL FD S+ EAA DLGA + V+IP+++PA+++ +L+ TLS DD
Sbjct: 139 LPFVVITVMARLSGFDESLPEAARDLGANDFTMTRTVLIPVIMPALLAGWLLGFTLSLDD 198
Query: 207 FVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTK 256
V++ FVSGP LPLRIYSM+R+G+ P VNAL +L+V S+ + + ++
Sbjct: 199 VVVSTFVSGPSYEILPLRIYSMVRVGLKPEVNALGTLLLVFSLAMLMLSQ 248
>gi|153812232|ref|ZP_01964900.1| hypothetical protein RUMOBE_02631 [Ruminococcus obeum ATCC 29174]
gi|149831639|gb|EDM86726.1| hypothetical protein RUMOBE_02631 [Ruminococcus obeum ATCC 29174]
Length = 243
Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 96/229 (41%), Positives = 157/229 (68%), Gaps = 2/229 (0%)
Query: 26 YLPLIVLVIYSFNDGKGMV-WNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTII 84
YLP+ V++++SFN+ K V + GFSL+WY+EL H + + +A S+F+ ++S LVS +I
Sbjct: 2 YLPIAVVIVFSFNESKLPVRFTGFSLKWYQELI-HDDAMIEALGNSLFLGVVSCLVSAVI 60
Query: 85 GTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTT 144
GT GA+ L +K K L+ +S+LPL++P+II+G+ L+ F + G++T+ I HT
Sbjct: 61 GTLGAVGLSRIHWKTKGILEYISILPLMIPEIILGMVLMAFFYMMNLPFGMLTLLIGHTV 120
Query: 145 FNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSF 204
F +PY+L V +RL D S+ EAA DLGA + +I+P+++PA++S L+A +S
Sbjct: 121 FCVPYILMEVKARLAGMDPSLEEAARDLGAGPFRAFWDIILPLIMPAVLSGSLLAFAMSM 180
Query: 205 DDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTL 253
DD VI+ F++GP +TLP+++Y+ I+ GV+P VNAL I++V ++L+ L
Sbjct: 181 DDVVISIFINGPRLATLPIKVYTQIKTGVTPEVNALCTIMLVFTLLILL 229
>gi|121611659|ref|YP_999466.1| binding-protein-dependent transport systems inner membrane
component [Verminephrobacter eiseniae EF01-2]
gi|121556299|gb|ABM60448.1| binding-protein-dependent transport systems inner membrane
component [Verminephrobacter eiseniae EF01-2]
Length = 264
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 97/235 (41%), Positives = 157/235 (66%), Gaps = 2/235 (0%)
Query: 18 FILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALI 76
F +A++F YLP+++LV+ SFN+ +W G SLRWY +F + N I +A S+ +A +
Sbjct: 18 FGIALVFLYLPIVLLVLLSFNENNVATLWTGLSLRWYGIVFDNPN-ILRAAGNSMLVACV 76
Query: 77 SSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGII 136
+++VST+ A+A+ +FKG+ + M LPL+VP+I+ V+ L+ F +L LG+
Sbjct: 77 ATVVSTVFAGMAALAMARRNFKGQNVISGMLGLPLLVPEIVTAVASLLFFLSLGMDLGLR 136
Query: 137 TIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAF 196
T+ IAH F IP+ + +RL D +VEAA DL A+ Q ++ +P+L+P IIS
Sbjct: 137 TVTIAHIVFCIPFAYLPIRARLANMDPRLVEAAADLYASPGQAFRRITLPLLMPGIISGA 196
Query: 197 LMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILL 251
++A +S DDFVITFFV+GPG++TLP+ I+ M+R+G++P VNAL+ +L++ S++
Sbjct: 197 MLAFIVSLDDFVITFFVAGPGATTLPVYIFGMVRMGITPEVNALAALLLIASMVF 251
>gi|114763507|ref|ZP_01442912.1| putrescine ABC transporter, permease protein [Roseovarius sp.
HTCC2601]
gi|114543787|gb|EAU46799.1| putrescine ABC transporter, permease protein [Roseovarius sp.
HTCC2601]
Length = 272
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 101/230 (43%), Positives = 155/230 (67%), Gaps = 3/230 (1%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F YLP+++LV+YSFN+ + + VW GFS +WY EL ++ + A + ++ +A+ SS
Sbjct: 14 LGFAFLYLPMVLLVVYSFNESRLVTVWAGFSTKWYGELLRNEEFL-DAAWVTLKVAVFSS 72
Query: 79 LVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
++T++GT A L + F+G+ M PLV+P++I G+SLL++F + G++T
Sbjct: 73 TIATVLGTMAAYVLVRAGRFRGRTLFSGMIYAPLVMPEVITGLSLLLLFIGIGLDRGVLT 132
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
I +AHTTF++ YV +V SRL FD S+ EAA DLG + + V +P++ PA+IS +L
Sbjct: 133 IVLAHTTFSMCYVSVVVSSRLTSFDRSLEEAALDLGCSPFEAFRLVTLPIIAPAVISGWL 192
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
+A TLS DD VI F +GP ++TLP++I+S +RLGVSP +NALS +LI I
Sbjct: 193 LAFTLSLDDLVIASFTTGPSATTLPIKIFSAVRLGVSPEINALSTLLIGI 242
>gi|27382214|ref|NP_773743.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
110]
gi|27355385|dbj|BAC52368.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
110]
Length = 270
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 100/228 (43%), Positives = 149/228 (65%), Gaps = 3/228 (1%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L + F YLP+++LVIYSFN + + VW G+SLRWY E F I +A + S+ +A+ S+
Sbjct: 17 LGLAFLYLPILILVIYSFNASRLVTVWGGWSLRWYHEFFNDRAMI-EAAWMSLRVAVSSA 75
Query: 79 LVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
++T++GT A+AL + F+G+ M PLV+P++I G+SLL++F L + G T
Sbjct: 76 SIATLLGTLAAVALSRGERFRGRTLFSGMLYAPLVMPEVITGLSLLLLFVALNAERGFWT 135
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
+ IAHTT + +V +V SRL D S+ EAA DLG V +P++ PAI++ ++
Sbjct: 136 VTIAHTTLTMCFVAVVVQSRLGSLDRSLEEAAMDLGCNPVCAFAAVTLPLIAPAIVAGWM 195
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
+A TLS DD VI F +GPGS+TLP+RIYS +RLGV P +NA+ ++I
Sbjct: 196 LAFTLSLDDLVIASFTTGPGSATLPIRIYSEVRLGVKPEINAICTLVI 243
>gi|13473550|ref|NP_105118.1| spermidine/putrescine ABC transporter, permease protein
[Mesorhizobium loti MAFF303099]
gi|14024300|dbj|BAB50904.1| spermidine/putrescine ABC transporter, permease protein
[Mesorhizobium loti MAFF303099]
Length = 264
Score = 171 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 103/256 (40%), Positives = 167/256 (65%), Gaps = 5/256 (1%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYY 69
R+T +++ L F Y+P+ VLV SFN+G W+GFSL+WY L +S I A
Sbjct: 9 RRTLWLVLSLVFAFLYIPIAVLVALSFNEGGLPTAWSGFSLKWYASLANNS-AILSAALN 67
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
++ +AL+S+ ++T++GT AI ++ GK L+ + P+++PDI++ ++LL F+ L
Sbjct: 68 TLIVALVSTAIATLLGTLLAIGVEMRRQYGKG-LEALIFAPMIIPDIVLAIALLSFFSML 126
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
+G+ TI +AH FN+ +V +V +RL FD+SIVEA+ DLGA+ T +V +P++
Sbjct: 127 NLTMGLHTIILAHVVFNLAFVCSVVRARLKSFDWSIVEASADLGASAITTFRRVTLPVIA 186
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPG--SSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
PA+I+ L+A TLS D+F+I FF +G G S+TLP++IY+MIR G++P +NAL+ I + +
Sbjct: 187 PAVIAGALLAFTLSVDEFIIAFFTAGAGRASTTLPMQIYAMIRFGITPEINALATIFMAV 246
Query: 248 SILLTLSTKKLQKNFI 263
SI +++L K I
Sbjct: 247 SITALTLSQRLNKGVI 262
>gi|99082821|ref|YP_614975.1| binding-protein-dependent transport systems inner membrane
component [Silicibacter sp. TM1040]
gi|99039101|gb|ABF65713.1| binding-protein-dependent transport systems inner membrane
component [Silicibacter sp. TM1040]
Length = 272
Score = 171 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 100/243 (41%), Positives = 161/243 (66%), Gaps = 3/243 (1%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F Y+P+++L+++SFN+ K + VW GFS +WY EL ++ + +A + ++ +A+ SS
Sbjct: 14 LGFAFLYIPMLILILFSFNESKLVTVWAGFSTKWYGELMQNE-AMLQAAWVTVKVAVFSS 72
Query: 79 LVSTIIGTFGA-IALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
++T++GT A + ++ F G+ M PLV+P++I G+SLL++F + G++T
Sbjct: 73 TIATVLGTMAAYVMIRGGRFMGRTLFSGMIYAPLVMPEVITGLSLLLLFIGIGLDRGVLT 132
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
I +AHTTF++ YV +V SRL FD S+ EAA DLG + Q V +P++ PA++S +L
Sbjct: 133 IVLAHTTFSMCYVSVVVSSRLATFDRSLEEAALDLGCSQAQAFRLVTLPIIAPAVVSGWL 192
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKK 257
+A TLS DD VI F +GP ++TLP++I+S +RLGVSP +NALS I+I I + +S
Sbjct: 193 LAFTLSLDDLVIASFTTGPAATTLPIKIFSAVRLGVSPEINALSTIMIAIVTVGVISASL 252
Query: 258 LQK 260
+ K
Sbjct: 253 VSK 255
>gi|118755924|ref|ZP_01603709.1| binding-protein-dependent transport systems inner membrane
component [Shewanella pealeana ATCC 700345]
gi|118692619|gb|EAV98850.1| binding-protein-dependent transport systems inner membrane
component [Shewanella pealeana ATCC 700345]
Length = 271
Score = 171 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 104/248 (41%), Positives = 159/248 (64%), Gaps = 9/248 (3%)
Query: 14 SFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIF 72
S ++ M F Y P+ +LVIYSFN+ K + VW GFS +WY ELF+ I A + S+
Sbjct: 7 STVMLWAGMFFLYAPMFILVIYSFNESKLVTVWAGFSTKWYGELFR-DQQILDAVWTSLQ 65
Query: 73 IALISSLVSTIIGTFGAIALKWFDFK-GKKYLKNMSVLPLVVPDIIIGVSLLIMFATLK- 130
+A +S ++ I+GT A + F GK L NM PLV+P++I G+SLL++F +
Sbjct: 66 VAFYASTMAVILGTMAAFVMTRFARGWGKLTLSNMITAPLVMPEVITGLSLLLLFVHMAD 125
Query: 131 -----FKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVII 185
+ G++T++IAH+TF YV +V SRL E D S+ EAA DLGAT +T + +
Sbjct: 126 FFGWPAERGMLTVWIAHSTFCAAYVAVVVSSRLREIDRSVEEAAQDLGATPFKTFFAITV 185
Query: 186 PMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
PM+ PA+++ +L++ +LS DD VI F SGPG++TLP+ ++S +R+GVSP +NAL+ ++I
Sbjct: 186 PMISPALVAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSVRMGVSPKINALATLII 245
Query: 246 VISILLTL 253
+I L+
Sbjct: 246 LIVSLIAF 253
>gi|113971250|ref|YP_735043.1| binding-protein-dependent transport systems inner membrane
component [Shewanella sp. MR-4]
gi|117921532|ref|YP_870724.1| binding-protein-dependent transport systems inner membrane
component [Shewanella sp. ANA-3]
gi|113885934|gb|ABI39986.1| binding-protein-dependent transport systems inner membrane
component [Shewanella sp. MR-4]
gi|117613864|gb|ABK49318.1| binding-protein-dependent transport systems inner membrane
component [Shewanella sp. ANA-3]
Length = 271
Score = 171 bits (432), Expect = 6e-41, Method: Composition-based stats.
Identities = 109/250 (43%), Positives = 161/250 (64%), Gaps = 10/250 (4%)
Query: 14 SFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIF 72
S ++ + F Y P+++LVIYSFN+ K + VW GFS +WY ELF I A + S+
Sbjct: 7 SSVMLWFGLFFLYAPMLILVIYSFNESKLVTVWGGFSPKWYGELFA-DQQILDAVWTSLR 65
Query: 73 IALISSLVSTIIGTFGAIALKWFDFK-GKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF 131
IA SS ++ IIGT A + F K L NM PLV+P++I G+SLL++F +
Sbjct: 66 IAFYSSTMAVIIGTMAAFVMTRFKRSWAKLTLSNMITAPLVMPEVITGLSLLLLFVHMAD 125
Query: 132 KLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVII 185
LG ++T++IAH+TF YV +V SRL E D SI EAA DLGAT +T + +
Sbjct: 126 LLGWPKERGMVTVWIAHSTFCAAYVAVVVSSRLRELDMSIEEAAMDLGATPLKTFFLITV 185
Query: 186 PMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
PM+ PA+++ +L++ +LS DD VI F SGPG++TLP+ ++S +RLGVSP +NAL+ ++I
Sbjct: 186 PMISPALVAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSVRLGVSPKINALATLII 245
Query: 246 V-ISILLTLS 254
+ +S++ LS
Sbjct: 246 LCVSLIAFLS 255
>gi|149913019|ref|ZP_01901553.1| putrescine ABC transporter, permease protein [Roseobacter sp.
AzwK-3b]
gi|149813425|gb|EDM73251.1| putrescine ABC transporter, permease protein [Roseobacter sp.
AzwK-3b]
Length = 271
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 104/226 (46%), Positives = 154/226 (68%), Gaps = 3/226 (1%)
Query: 24 FFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVST 82
F YLP+++LVIYSFND K + VW GFS +WY EL ++ + A + +I +A +SS ++T
Sbjct: 18 FLYLPMVLLVIYSFNDSKLVTVWAGFSTKWYGELLRNEAFL-DAAWVTIQVAFVSSTIAT 76
Query: 83 IIGTFGA-IALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIA 141
I+GT GA + ++ F G+ M PLV+P++I G+SLL++F + G+ TI +A
Sbjct: 77 ILGTMGAYVIVRAGRFTGRTLFSGMIYAPLVMPEVITGLSLLLLFIGIGLDRGMFTIILA 136
Query: 142 HTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALT 201
HTTF++ YV +V SRL FD S+ EAA DLG + Q V +P++ PA+++ +L+A T
Sbjct: 137 HTTFSMCYVSVVVSSRLVTFDRSLEEAALDLGCSPMQAFRLVTLPIIAPAVVAGWLLAFT 196
Query: 202 LSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
LS DD VI F +GP ++TLP++I+S IRLGVSP +NALS +LI +
Sbjct: 197 LSLDDLVIASFTAGPSATTLPIKIWSSIRLGVSPEINALSTLLIAV 242
>gi|33151767|ref|NP_873120.1| spermidine/putrescine ABC transporter membrane component
[Haemophilus ducreyi 35000HP]
gi|33147988|gb|AAP95509.1| spermidine/putrescine transport system permease protein
[Haemophilus ducreyi 35000HP]
Length = 255
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 101/238 (42%), Positives = 164/238 (68%), Gaps = 2/238 (0%)
Query: 20 LAMIFFYLPLIVLVIYSFN-DGKGMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L ++ Y+P+I+LVI SFN D G+ W GFS WY+ LF + I A SI IA ++
Sbjct: 12 LVFVYLYIPIIILVINSFNADRYGLKWKGFSWNWYERLFANDTLI-NATTNSITIAFFAA 70
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
+STI+G+ +IAL + F+GK+++ M + ++ PDI++ VS+L++F + KLG +++
Sbjct: 71 TLSTILGSLTSIALYRYKFRGKQFVGGMLFVVMMSPDIVMAVSMLVLFMIIGVKLGFLSL 130
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
IAH TF +PYV+ + SRL +FD ++EAA DLGA+ TL K+++P+ LP+IIS +L+
Sbjct: 131 LIAHITFCLPYVVITISSRLSDFDGKMLEAAKDLGASEVTTLRKIVLPLALPSIISGWLL 190
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTK 256
+ T+S DD V++ FV+ P LPL+I+S+++ GV+P VNAL+ I+I+ S+ L + ++
Sbjct: 191 SFTISLDDVVVSSFVTSPSYEVLPLKIFSLVKTGVTPEVNALATIMIIFSLSLVVLSQ 248
>gi|77976849|ref|ZP_00832317.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Yersinia intermedia ATCC 29909]
Length = 281
Score = 170 bits (430), Expect = 9e-41, Method: Composition-based stats.
Identities = 106/244 (43%), Positives = 157/244 (64%), Gaps = 10/244 (4%)
Query: 16 IIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIA 74
+I ++ F Y P+++LVIYSFN K + VW G+S RWY ELF S I A S+ IA
Sbjct: 14 VILVIGYTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYTELFNDSAMI-SAVGLSLTIA 72
Query: 75 LISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKL 133
S+ ++ ++GT A+ + F F+G M PLV+PD+I G+SLL++F + +
Sbjct: 73 AASATMAVVLGTIAAVVMVRFGRFRGSTGFAFMLTAPLVMPDVITGLSLLLLFVAMGHAI 132
Query: 134 G------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPM 187
G + TI++AH TF YV ++ SRL E D SI EAA DLGAT + + +PM
Sbjct: 133 GWPAERGMFTIWLAHVTFCTAYVTVVISSRLRELDRSIEEAAMDLGATPLKVFFVITVPM 192
Query: 188 LLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL-SVILIV 246
+ PA+IS +L+A TLS DD VI FV+GPG++TLP+ ++S +R+GV+P +NAL ++IL+V
Sbjct: 193 IAPALISGWLLAFTLSLDDLVIASFVAGPGATTLPMLVFSSVRMGVNPEINALATLILLV 252
Query: 247 ISIL 250
+ I+
Sbjct: 253 VGII 256
>gi|94499309|ref|ZP_01305847.1| polyamine ABC transporter, permease protein [Oceanobacter sp.
RED65]
gi|94428941|gb|EAT13913.1| polyamine ABC transporter, permease protein [Oceanobacter sp.
RED65]
Length = 273
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 104/251 (41%), Positives = 163/251 (64%), Gaps = 9/251 (3%)
Query: 4 MSNNLNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNN 62
MS ++ S I F + + F YLP+++L+IYSFN+ + + VW GFS +WY ELFK +
Sbjct: 1 MSLDIRNWSFSKIFFWIGIAFLYLPMVILIIYSFNESRLVTVWAGFSTKWYVELFK-DDQ 59
Query: 63 IWKAFYYSIFIALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVS 121
I A S+ +A S+ + +G F AI + + FK + + PLV+PD+IIG+S
Sbjct: 60 IMTAVGRSLQVAFYSATAAVALGIFAAIVMVRIKKFKTRTFFTGTITAPLVMPDVIIGLS 119
Query: 122 LLIMFATL------KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGAT 175
+L++F + + G++TI+IAHTTF + Y ++ SRL E D+SI EAA DLGA
Sbjct: 120 MLLLFVAMGQLIGWPAERGMLTIWIAHTTFCLAYSTVVISSRLLEMDHSIEEAALDLGAN 179
Query: 176 NRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSP 235
+ K+ +P++ PAI SA+L++ TLS DD VI FV+GPG++TLP+ ++S +RLG++P
Sbjct: 180 QLEAFVKITMPVIAPAIASAWLLSFTLSLDDVVIASFVTGPGATTLPIEVFSSVRLGITP 239
Query: 236 VVNALSVILIV 246
+NAL+ ++I+
Sbjct: 240 KINALATLIIL 250
>gi|77957671|ref|ZP_00821721.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Yersinia bercovieri ATCC 43970]
Length = 281
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 107/244 (43%), Positives = 158/244 (64%), Gaps = 10/244 (4%)
Query: 16 IIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIA 74
+I I+ F Y P+++LVIYSFN K + VW G+S+RWY ELF S I A S+ IA
Sbjct: 14 VILIIGYTFLYAPMLMLVIYSFNSSKLVTVWAGWSIRWYIELFNDSAMI-SAVGLSLTIA 72
Query: 75 LISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKL 133
S+ ++ ++GT A+ + F F+G M PLV+PD+I G+SLL++F + +
Sbjct: 73 AASATMAVVLGTIAAVVMVRFGRFRGSTGFAFMLTAPLVMPDVITGLSLLLLFVAMGHAI 132
Query: 134 G------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPM 187
G + TI++AH TF YV ++ SRL E D SI EAA DLGAT + + +PM
Sbjct: 133 GWPAERGMFTIWLAHVTFCTAYVTVVISSRLRELDRSIEEAAMDLGATPLKVFFVITVPM 192
Query: 188 LLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL-SVILIV 246
+ PA+IS +L+A TLS DD VI FV+GPG++TLP+ ++S +R+GV+P +NAL ++IL+V
Sbjct: 193 IAPALISGWLLAFTLSLDDLVIASFVAGPGATTLPMLVFSSVRMGVNPEINALATLILLV 252
Query: 247 ISIL 250
+ I+
Sbjct: 253 VGII 256
>gi|118072737|ref|ZP_01540924.1| binding-protein-dependent transport systems inner membrane
component [Shewanella woodyi ATCC 51908]
gi|118022758|gb|EAV36575.1| binding-protein-dependent transport systems inner membrane
component [Shewanella woodyi ATCC 51908]
Length = 275
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 107/258 (41%), Positives = 163/258 (63%), Gaps = 9/258 (3%)
Query: 4 MSNNLNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNN 62
MSN L + S I+ M F Y P+ +LVIYSFN+ K + VW GFS +WY ELF+
Sbjct: 1 MSNRLKKMSFSTIMLWAGMFFLYAPMFILVIYSFNESKLVTVWGGFSPKWYGELFR-DQQ 59
Query: 63 IWKAFYYSIFIALISSLVSTIIGTFGAIALKWFDFK-GKKYLKNMSVLPLVVPDIIIGVS 121
I A + S+ +A +S ++ I+GT A + F GK L NM PLV+P++I G+S
Sbjct: 60 ILDAVWTSLRVAFFASTMAVILGTMAAFVMTRFKRSWGKMTLSNMITAPLVMPEVITGLS 119
Query: 122 LLIMFATLK------FKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGAT 175
LL++F + + G++T++IAH+TF YV +V +RL E D SI EAA DLGAT
Sbjct: 120 LLLLFVHMADLFGWPAERGMLTVWIAHSTFCAAYVAVVVSARLRELDQSIEEAAQDLGAT 179
Query: 176 NRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSP 235
+T + +PM+ P++++ +L++ +LS DD VI F SGPG++TLP+ ++S +R+GVSP
Sbjct: 180 PLKTFFYITVPMITPSLMAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSVRMGVSP 239
Query: 236 VVNALSVILIVISILLTL 253
+NAL+ ++I+ L+
Sbjct: 240 KINALATLIILTVSLIAF 257
>gi|77974800|ref|ZP_00830338.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Yersinia frederiksenii ATCC 33641]
Length = 281
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 107/244 (43%), Positives = 158/244 (64%), Gaps = 10/244 (4%)
Query: 16 IIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIA 74
+I I+ F Y P+++LVIYSFN K + VW G+S+RWY ELF S I A S+ IA
Sbjct: 14 VILIVGYTFLYAPMLMLVIYSFNSSKLVTVWAGWSIRWYIELFNDSAMI-SAVGLSLTIA 72
Query: 75 LISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKL 133
S+ ++ ++GT A+ + F F+G M PLV+PD+I G+SLL++F + +
Sbjct: 73 AASATMAVVLGTIAAVVMVRFGRFRGSTGFAFMLTAPLVMPDVITGLSLLLLFVAMGHAI 132
Query: 134 G------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPM 187
G + TI++AH TF YV ++ SRL E D SI EAA DLGAT + + +PM
Sbjct: 133 GWPAERGMFTIWLAHVTFCTAYVTVVISSRLRELDRSIEEAAMDLGATPLKVFFVITVPM 192
Query: 188 LLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL-SVILIV 246
+ PA+IS +L+A TLS DD VI FV+GPG++TLP+ ++S +R+GV+P +NAL ++IL+V
Sbjct: 193 IAPALISGWLLAFTLSLDDLVIASFVAGPGATTLPMLVFSSVRMGVNPEINALATLILLV 252
Query: 247 ISIL 250
+ I+
Sbjct: 253 VGII 256
>gi|77960543|ref|ZP_00824410.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Yersinia mollaretii ATCC 43969]
Length = 281
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 107/244 (43%), Positives = 158/244 (64%), Gaps = 10/244 (4%)
Query: 16 IIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIA 74
+I I+ F Y P+++LVIYSFN K + VW G+S+RWY ELF S I A S+ IA
Sbjct: 14 VILIIGYTFLYAPMLMLVIYSFNSSKLVTVWAGWSIRWYIELFNDSAMI-SAVGLSLTIA 72
Query: 75 LISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKL 133
S+ ++ ++GT A+ + F F+G M PLV+PD+I G+SLL++F + +
Sbjct: 73 AASATMAVVLGTIAAVVMVRFGRFRGSTGFAFMLTAPLVMPDVITGLSLLLLFVAMGHAI 132
Query: 134 G------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPM 187
G + TI++AH TF YV ++ SRL E D SI EAA DLGAT + + +PM
Sbjct: 133 GWPAERGMFTIWLAHVTFCTAYVTVVISSRLRELDRSIEEAAMDLGATPLKVFFVITVPM 192
Query: 188 LLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL-SVILIV 246
+ PA+IS +L+A TLS DD VI FV+GPG++TLP+ ++S +R+GV+P +NAL ++IL+V
Sbjct: 193 IAPALISGWLLAFTLSLDDLVIASFVAGPGATTLPMLVFSSVRMGVNPEINALATLILLV 252
Query: 247 ISIL 250
+ I+
Sbjct: 253 VGII 256
>gi|83950998|ref|ZP_00959731.1| putrescine ABC transporter, permease protein [Roseovarius
nubinhibens ISM]
gi|83838897|gb|EAP78193.1| putrescine ABC transporter, permease protein [Roseovarius
nubinhibens ISM]
Length = 271
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 107/243 (44%), Positives = 158/243 (65%), Gaps = 3/243 (1%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F YLP+++LV+YSFN K + VW GFS RWY EL ++ + A + ++ +A++SS
Sbjct: 14 LGFAFLYLPMVILVVYSFNASKLVTVWGGFSTRWYGELMRNEAFL-DAAWVTVKVAVMSS 72
Query: 79 LVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
++TI+GT A L + F G+ M PLV+P++I G+SLL++F + G++T
Sbjct: 73 TLATILGTMAAYVLVRAGRFAGRTLFSGMIYAPLVMPEVITGLSLLLLFIGIGMDRGVMT 132
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
I +AHTTF + YV +V SRL FD S+ EAA DLG T + V +P++ PA+IS +L
Sbjct: 133 IVLAHTTFAMCYVSVVVSSRLVSFDRSLEEAALDLGCTPFEAFRLVTLPIIAPAVISGWL 192
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKK 257
+A TLS DD VI F +GP ++TLP++I+S +RLGVSP +NALS I+I I + +S
Sbjct: 193 LAFTLSLDDLVIASFTAGPSATTLPIKIFSAVRLGVSPEINALSTIMIGIVTVGVISASL 252
Query: 258 LQK 260
+ K
Sbjct: 253 ISK 255
>gi|123441808|ref|YP_001005792.1| putrescine transport system permease protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122088769|emb|CAL11574.1| putrescine transport system permease protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 281
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 106/244 (43%), Positives = 158/244 (64%), Gaps = 10/244 (4%)
Query: 16 IIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIA 74
+I ++ F Y P+++LVIYSFN K + VW G+S+RWY ELF S I A S+ IA
Sbjct: 14 VILMVGYTFLYAPMLMLVIYSFNSSKLVTVWAGWSIRWYIELFNDSAMI-SAVGLSLTIA 72
Query: 75 LISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKL 133
S+ ++ ++GT A+ + F F+G M PLV+PD+I G+SLL++F + +
Sbjct: 73 AASATMAVVLGTIAAVVMVRFGRFRGSTGFAFMLTAPLVMPDVITGLSLLLLFVAMGHAI 132
Query: 134 G------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPM 187
G + TI++AH TF YV ++ SRL E D SI EAA DLGAT + + +PM
Sbjct: 133 GWPADRGMFTIWLAHVTFCTAYVTVVISSRLRELDRSIEEAAMDLGATPLKVFFVITVPM 192
Query: 188 LLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL-SVILIV 246
+ PA+IS +L+A TLS DD VI FV+GPG++TLP+ ++S +R+GV+P +NAL ++IL+V
Sbjct: 193 IAPALISGWLLAFTLSLDDLVIASFVAGPGATTLPMLVFSSVRMGVNPEINALATLILLV 252
Query: 247 ISIL 250
+ I+
Sbjct: 253 VGII 256
>gi|148258044|ref|YP_001242629.1| putrescine transport protein (ABC superfamily, membrane)
[Bradyrhizobium sp. BTAi1]
gi|146410217|gb|ABQ38723.1| putrescine transport protein (ABC superfamily, membrane)
[Bradyrhizobium sp. BTAi1]
Length = 274
Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 101/243 (41%), Positives = 156/243 (64%), Gaps = 7/243 (2%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L + F YLP+++LVIYSFN + + VW G+SLRWY E F I A + S+ + S+
Sbjct: 21 LGLAFLYLPILILVIYSFNASRLVTVWGGWSLRWYHEFFNDRAMI-DAAWMSLRVGATSA 79
Query: 79 LVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
+T++GT A+AL + F+G+ M PLV+P++I G+SLL++F L+ + G T
Sbjct: 80 TAATVLGTLAAVALSRGQGFRGRMLFSGMLYAPLVMPEVITGLSLLLLFVALEAERGFWT 139
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
+ IAHTT + +V +V SRL D S+ EAA DLG + V +P++ PA+++ ++
Sbjct: 140 VTIAHTTLTMCFVAVVVQSRLVSLDRSLEEAAMDLGCDPLRAFVLVTLPLIAPAVVAGWM 199
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI----VISILLTL 253
+A TLS DD VI F +GPGS+TLP+RIYS +RLGV P +NA+ ++I V+ ++ +L
Sbjct: 200 LAFTLSLDDLVIASFTTGPGSATLPIRIYSEVRLGVKPEINAICTLVIGLIAVVIVVASL 259
Query: 254 STK 256
++K
Sbjct: 260 ASK 262
>gi|156934646|ref|YP_001438562.1| hypothetical protein ESA_02480 [Enterobacter sakazakii ATCC
BAA-894]
gi|156532900|gb|ABU77726.1| hypothetical protein ESA_02480 [Enterobacter sakazakii ATCC
BAA-894]
Length = 281
Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 107/250 (42%), Positives = 160/250 (64%), Gaps = 10/250 (4%)
Query: 10 RRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFY 68
R +I IL F Y P+++LV+YSFN K + VW G+S RWY ELF H + + A
Sbjct: 8 RSPWRILILILGFTFLYAPMLMLVVYSFNSSKLVTVWAGWSTRWYGELF-HDSAMINAVG 66
Query: 69 YSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFA 127
S+ IA ++ ++ ++GT A+ + F F+G M PLV+PD+I G+SLL++F
Sbjct: 67 LSLTIAACAATMAVVLGTIAAVVMVRFGRFRGSNGFAFMLTAPLVMPDVITGLSLLLLFV 126
Query: 128 TLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLT 181
L +G ++TI++AH TF YV ++ SRL E D SI EAA DLGAT +
Sbjct: 127 ALGHAIGWPSDRGMLTIWLAHVTFCTAYVSVVISSRLRELDRSIEEAAMDLGATPLKVFF 186
Query: 182 KVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL- 240
+ +PM++PA++S +L+A TLS DD VI FVSGPG++TLP+ ++S +R+GV+P +NAL
Sbjct: 187 VITLPMIMPAVVSGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALA 246
Query: 241 SVILIVISIL 250
S+IL V+ ++
Sbjct: 247 SIILGVVGVI 256
>gi|56698289|ref|YP_168662.1| putrescine ABC transporter, permease protein [Silicibacter pomeroyi
DSS-3]
gi|56680026|gb|AAV96692.1| putrescine ABC transporter, permease protein [Silicibacter
pomeroyi DSS-3]
Length = 271
Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 105/243 (43%), Positives = 161/243 (66%), Gaps = 3/243 (1%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F Y+P+++L++YSFN+ K + VW GFS +WY ELF+ ++ A + ++ +A++SS
Sbjct: 14 LGFAFLYIPMLILIVYSFNESKLVTVWAGFSTKWYGELFQ-NDAFLNAAWVTLKVAVMSS 72
Query: 79 LVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
++TI+GT A+ L + F G+ M PLV+P++I G+SLL++F + G++T
Sbjct: 73 TLATILGTMAALVLVRAGRFMGRTLFSGMIYAPLVMPEVITGLSLLLLFIGIGLDRGVMT 132
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
I +AHTTF + YV +V SRL FD S+ EAA DLG + + V +P++ PA+IS +L
Sbjct: 133 IVLAHTTFAMCYVSVVVSSRLVTFDRSLEEAALDLGCSAAEAFRLVTLPIIAPAVISGWL 192
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKK 257
+A TLS DD VI F SGP ++TLP++I+S +RLGVSP +NALS I+I I + +S
Sbjct: 193 LAFTLSLDDLVIASFTSGPAATTLPIKIFSAVRLGVSPEINALSTIMIGIVTVGVISASL 252
Query: 258 LQK 260
+ K
Sbjct: 253 ISK 255
>gi|46203969|ref|ZP_00050694.2| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Magnetospirillum magnetotacticum MS-1]
Length = 258
Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 102/244 (41%), Positives = 152/244 (62%), Gaps = 3/244 (1%)
Query: 17 IFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIAL 75
+ LA+ F Y P++VL++YSFN K + VW GFS WY LF I A S+ +A+
Sbjct: 8 VLALALTFLYAPILVLIVYSFNASKLVTVWGGFSTHWYGVLFADGPLIAAALV-SLKVAV 66
Query: 76 ISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLG 134
+S+ ++ ++GT A+AL + F G+ + P+V+P++I G+SLL++F + G
Sbjct: 67 LSAAIAGVLGTCAALALDRHGRFFGRGAYTGLLYAPMVMPEVITGLSLLLLFVGIGLDRG 126
Query: 135 IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIIS 194
I T+ IAH TF +V +V +RL D S+ EAA DLGA + + +P++ PA+ +
Sbjct: 127 IGTLVIAHATFATGFVAVVVGARLKGLDRSLEEAAADLGAGPARVFFGITLPLIAPAVAA 186
Query: 195 AFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLS 254
FL+A TLS DD VI FVSGPG++TLP+RIYS +RLGV+P +NA S +LI L+ L+
Sbjct: 187 GFLLAFTLSLDDLVIASFVSGPGATTLPMRIYSQVRLGVNPEINAASTLLIATVGLVVLA 246
Query: 255 TKKL 258
L
Sbjct: 247 ASWL 250
>gi|51891607|ref|YP_074298.1| spermidine/putrescine ABC transporter permease protein
[Symbiobacterium thermophilum IAM 14863]
gi|51855296|dbj|BAD39454.1| spermidine/putrescine ABC transporter permease protein
[Symbiobacterium thermophilum IAM 14863]
Length = 257
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 103/241 (42%), Positives = 164/241 (68%), Gaps = 2/241 (0%)
Query: 24 FFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVST 82
F YLP+ +LVI SFN + VW GF+L WY LF+ + +W+A S+ IA +++++T
Sbjct: 18 FLYLPIFLLVILSFNSSRTSAVWKGFTLDWYVRLFQ-NRLLWEAVKNSLIIAAATAVIAT 76
Query: 83 IIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAH 142
+GT A+AL G+ +++ + +PLV+PDI++GV L++F L LG+ TI AH
Sbjct: 77 ALGTAAALALHRRHIPGRVWIEGLLYVPLVLPDIVLGVGALVLFTALGISLGLGTILAAH 136
Query: 143 TTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTL 202
+I YV+ ++ +RL + D + EAA DLGAT QTL V +P+L+PAI++A L++ TL
Sbjct: 137 VGTSISYVVLVLRARLSDMDERLEEAARDLGATPWQTLRYVTLPLLMPAIVAAILLSFTL 196
Query: 203 SFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNF 262
S DDF+++FF +GPG++TLPLR+Y M++ G++P VNALS I+++++ + T +L +N
Sbjct: 197 SLDDFILSFFTAGPGATTLPLRVYGMMKTGLTPEVNALSTIMVLVTGIATTLYLRLTENR 256
Query: 263 I 263
I
Sbjct: 257 I 257
>gi|87120807|ref|ZP_01076700.1| putrescine ABC transporter, permease protein [Marinomonas sp.
MED121]
gi|86164035|gb|EAQ65307.1| putrescine ABC transporter, permease protein [Marinomonas sp.
MED121]
Length = 273
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 108/236 (45%), Positives = 151/236 (63%), Gaps = 9/236 (3%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L +F Y P+ L+IYSFN K + VW G+SL+WY ELF++ I A S+ IA IS+
Sbjct: 14 LGYLFLYAPIFSLIIYSFNKSKLVTVWGGWSLKWYSELFENEQ-IINAALLSLKIAFISA 72
Query: 79 LVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLG--- 134
++ ++GT L F FKGK L PLV+P++I G+SLL++F ++ G
Sbjct: 73 TLAVVLGTMAGFVLSRFGPFKGKMILSGWVTAPLVMPEVITGLSLLLLFVAMEGLFGWPS 132
Query: 135 ---IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPA 191
+TI IAHTTF + YV IV SRL D ++ EAA DLGA V +P+++PA
Sbjct: 133 GRGTLTIIIAHTTFCLAYVAVIVQSRLASMDETLEEAAMDLGAKPGSLFFLVTLPLIMPA 192
Query: 192 IISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
IIS +L++ TLS DD VI FVSGPG+STLP+ I+S +RLGV+P VNAL+ ++I++
Sbjct: 193 IISGWLLSFTLSLDDLVIASFVSGPGNSTLPMVIFSKVRLGVTPEVNALATLMILV 248
>gi|89076801|ref|ZP_01163059.1| putative spermidine/putrescine ABC transporter, permease protein
[Photobacterium sp. SKA34]
gi|89047561|gb|EAR53181.1| putative spermidine/putrescine ABC transporter, permease protein
[Photobacterium sp. SKA34]
Length = 256
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 102/254 (40%), Positives = 177/254 (69%), Gaps = 4/254 (1%)
Query: 12 KTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYS 70
K SF+ + A F Y P+I+L++ SFN+ K GM W GF+ +WY++L ++++ +A +S
Sbjct: 6 KFSFMTVVYA--FLYTPIIILIVNSFNESKFGMKWGGFTTKWYEQLVS-NDSLMQAAGHS 62
Query: 71 IFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLK 130
I IA+ S+ +++IG+ A+AL ++FKGKK++ M L ++ PDI++ +SLL +F L
Sbjct: 63 ITIAVFSATAASLIGSLTAVALFRYNFKGKKFVSGMLFLVMMSPDIVMAISLLALFLLLG 122
Query: 131 FKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLP 190
LG +T+ ++H TF +P+V+ V SRL FD ++EAA DLGA+ L ++I+P+ P
Sbjct: 123 ANLGFLTLLLSHITFCLPFVVVTVYSRLKGFDVKMLEAARDLGASEWVILKQIILPLAKP 182
Query: 191 AIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISIL 250
A+ + +L++ TLS DD +++ FV+GP LPL+IYSM+++G+SP VNAL+ +++++S++
Sbjct: 183 AVAAGWLLSFTLSLDDVIVSSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLIVSLV 242
Query: 251 LTLSTKKLQKNFIK 264
L + ++ L ++ IK
Sbjct: 243 LVICSQLLARDKIK 256
>gi|90578573|ref|ZP_01234383.1| spermidine/putrescine ABC transporter membrane component [Vibrio
angustum S14]
gi|90439406|gb|EAS64587.1| spermidine/putrescine ABC transporter membrane component [Vibrio
angustum S14]
Length = 256
Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats.
Identities = 102/254 (40%), Positives = 178/254 (70%), Gaps = 4/254 (1%)
Query: 12 KTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYS 70
K SF+ + A F Y P+I+L++ SFN+ K GM W GF+ +WY++L +++++ +A +S
Sbjct: 6 KFSFMSVVYA--FLYTPIIILIVNSFNESKFGMKWGGFTTKWYEQLV-NNDSLMQAAGHS 62
Query: 71 IFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLK 130
I IA+ S+ +++IG+ A+AL ++FKGKK++ M L ++ PDI++ +SLL +F L
Sbjct: 63 ITIAVFSATAASLIGSLTAVALFRYNFKGKKFVSGMLFLVMMSPDIVMAISLLALFLLLG 122
Query: 131 FKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLP 190
LG +T+ ++H TF +P+V+ V SRL FD ++EAA DLGA+ L ++I+P+ P
Sbjct: 123 ANLGFLTLLLSHITFCLPFVVVTVYSRLKGFDVKMLEAARDLGASEWVILKQIILPLAKP 182
Query: 191 AIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISIL 250
A+ + +L++ TLS DD +++ FV+GP LPL+IYSM+++G+SP VNAL+ +++++S++
Sbjct: 183 AVAAGWLLSFTLSLDDVIVSSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLIVSLI 242
Query: 251 LTLSTKKLQKNFIK 264
L + ++ L ++ IK
Sbjct: 243 LVICSQLLARDKIK 256
>gi|84683817|ref|ZP_01011720.1| putrescine ABC transporter, permease protein [Rhodobacterales
bacterium HTCC2654]
gi|84668560|gb|EAQ15027.1| putrescine ABC transporter, permease protein [Rhodobacterales
bacterium HTCC2654]
Length = 269
Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats.
Identities = 110/244 (45%), Positives = 160/244 (65%), Gaps = 7/244 (2%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
+ F Y+P+I+LV+YSFN+ K + VW GFS +WY ELF++ + A + ++ +A+ SS
Sbjct: 14 IGFAFLYMPMIILVVYSFNESKLVTVWAGFSTKWYGELFRNEAFL-DAAWVTLRVAVFSS 72
Query: 79 LVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
++TI+GT A L + F GK M PLV+PD+I+G+SLL++F + G++T
Sbjct: 73 TLATILGTAAAYVLVRGGKFFGKTLFSGMIYAPLVMPDVILGLSLLLLFIAVGLDRGMLT 132
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
I +AHTTF + YV +V SRL FD S+ EAA DLG T V +P++ PA++S +L
Sbjct: 133 IILAHTTFAMCYVAVVVSSRLVSFDRSLEEAALDLGCTPWDAFRSVTLPIIAPAVVSGWL 192
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI----VISILLTL 253
+ TLS DD VI F SGP S+TLP++I+S +RLGVSP +NALS ILI + I ++
Sbjct: 193 LGFTLSLDDLVIASFTSGPSSTTLPIKIFSAVRLGVSPEINALSSILIGFVTIGVITFSI 252
Query: 254 STKK 257
STK+
Sbjct: 253 STKR 256
>gi|15598805|ref|NP_252299.1| polyamine transport protein PotC [Pseudomonas aeruginosa PAO1]
gi|9949766|gb|AAG06997.1|AE004781_5 polyamine transport protein PotC [Pseudomonas aeruginosa PAO1]
Length = 256
Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats.
Identities = 101/246 (41%), Positives = 168/246 (68%), Gaps = 5/246 (2%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L +F Y+PL+++V+YSFND + W GF+L WY++LF + ++ +A S+ IAL+S+
Sbjct: 13 LVYLFLYVPLVIVVLYSFNDSRLNAEWVGFTLDWYRKLFG-NRDMLQAAANSLVIALVSA 71
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
V+T++GT +AL F + L + + P+ +P++++GVSL+I F L LG++++
Sbjct: 72 SVATLLGTLAGVALHRFKLR---VLPLLVLTPIAIPELLMGVSLVIFFIGLNMSLGMLSV 128
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
+AH TF++ +V +V +R+ D S+ EAA DLGAT Q+ V +P+++P I++ LM
Sbjct: 129 TLAHITFSVGFVALVVQARMSGMDESLTEAARDLGATPWQSFHLVTLPLIMPGIVAGALM 188
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKL 258
A TLS DDFVITFF +G G +TLP +IY+MI++ V+P VNA+S +L++++++L + KL
Sbjct: 189 AFTLSIDDFVITFFTAGGGFATLPTQIYTMIKIAVTPEVNAVSTLLMLLTLVLIVIASKL 248
Query: 259 QKNFIK 264
+ IK
Sbjct: 249 SPSAIK 254
>gi|84319589|ref|ZP_00967983.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Pseudomonas aeruginosa C3719]
gi|84325675|ref|ZP_00973708.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Pseudomonas aeruginosa 2192]
gi|107103123|ref|ZP_01367041.1| hypothetical protein PaerPA_01004192 [Pseudomonas aeruginosa PACS2]
gi|116051606|ref|YP_789555.1| polyamine transport protein PotC [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115586827|gb|ABJ12842.1| polyamine transport protein PotC [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126168456|gb|EAZ53967.1| polyamine transport protein PotC [Pseudomonas aeruginosa C3719]
gi|126195685|gb|EAZ59748.1| polyamine transport protein PotC [Pseudomonas aeruginosa 2192]
Length = 256
Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats.
Identities = 101/246 (41%), Positives = 168/246 (68%), Gaps = 5/246 (2%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L +F Y+PL+++V+YSFND + W GF+L WY++LF + ++ +A S+ IAL+S+
Sbjct: 13 LVYLFLYVPLVIVVLYSFNDSRLNAEWVGFTLDWYRKLFG-NRDMLQAAANSLVIALVSA 71
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
V+T++GT +AL F + L + + P+ +P++++GVSL+I F L LG++++
Sbjct: 72 SVATLLGTLAGVALHRFKLR---VLPLLVLTPIAIPELLMGVSLVIFFIGLNMSLGMLSV 128
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
+AH TF++ +V +V +R+ D S+ EAA DLGAT Q+ V +P+++P I++ LM
Sbjct: 129 TLAHITFSVGFVALVVQARMSGMDESLTEAARDLGATPWQSFRLVTLPLIMPGIVAGALM 188
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKL 258
A TLS DDFVITFF +G G +TLP +IY+MI++ V+P VNA+S +L++++++L + KL
Sbjct: 189 AFTLSIDDFVITFFTAGGGFATLPTQIYTMIKIAVTPEVNAVSTLLMLLTLVLIVIASKL 248
Query: 259 QKNFIK 264
+ IK
Sbjct: 249 SPSAIK 254
>gi|27365897|ref|NP_761425.1| spermidine/putrescine ABC transporter membrane component [Vibrio
vulnificus CMCP6]
gi|27362046|gb|AAO10952.1|AE016805_209 ABC-type spermidine/putrescine transport system, permease component
II [Vibrio vulnificus CMCP6]
Length = 247
Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats.
Identities = 100/246 (40%), Positives = 168/246 (68%), Gaps = 2/246 (0%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F YLP+IVL+ SFN+ K GM W GF+ +WY L +++++ +A ++S +A+ S+
Sbjct: 3 LVYAFLYLPIIVLIANSFNENKFGMKWGGFTTKWYHALV-NNDSLMQAAWHSFNVAIFSA 61
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
+TIIG+ A+AL + FKGK + M + ++ PDI++ +SLL +F L +LG T+
Sbjct: 62 TAATIIGSLTAVALFRYQFKGKSAVNGMLFVVMMSPDIVMAISLLALFLVLGAQLGFFTL 121
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
+AH TF +P+V+ V SRL+ FD ++EAA DLGA+ L ++I+P+ PA+ + +L+
Sbjct: 122 LVAHITFCLPFVVVTVYSRLNGFDVKMLEAAKDLGASEWVILKQIILPLAKPAVAAGWLL 181
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKL 258
+ TLS DD +I+ FV+GP L L+IYSM+++G+SP VNAL+ +++V+S++L ++++ L
Sbjct: 182 SFTLSLDDVIISSFVTGPTYEILSLKIYSMVKVGISPEVNALATVMLVVSLVLVITSQIL 241
Query: 259 QKNFIK 264
+ +K
Sbjct: 242 AREKVK 247
>gi|16121616|ref|NP_404929.1| putrescine transport system permease protein [Yersinia pestis CO92]
gi|22126724|ref|NP_670147.1| putrescine ABC transport protein; permease [Yersinia pestis KIM]
gi|77635189|ref|ZP_00797277.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Yersinia pestis Angola]
gi|89104712|ref|ZP_01177248.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Yersinia pestis biovar Orientalis str.
IP275]
gi|108806621|ref|YP_650537.1| putrescine transport system permease protein [Yersinia pestis
Antiqua]
gi|108812807|ref|YP_648574.1| putrescine transport system permease protein [Yersinia pestis
Nepal516]
gi|145599634|ref|YP_001163710.1| putrescine transport system permease protein [Yersinia pestis
Pestoides F]
gi|149366687|ref|ZP_01888721.1| putrescine transport system permease protein [Yersinia pestis
CA88-4125]
gi|21959744|gb|AAM86398.1|AE013887_5 putrescine ABC transport protein; permease [Yersinia pestis KIM]
gi|108776455|gb|ABG18974.1| putrescine transport system permease protein [Yersinia pestis
Nepal516]
gi|108778534|gb|ABG12592.1| putrescine transport system permease protein [Yersinia pestis
Antiqua]
gi|115347095|emb|CAL19987.1| putrescine transport system permease protein [Yersinia pestis CO92]
gi|145211330|gb|ABP40737.1| putrescine transport system permease protein [Yersinia pestis
Pestoides F]
gi|149291061|gb|EDM41136.1| putrescine transport system permease protein [Yersinia pestis
CA88-4125]
Length = 281
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 101/240 (42%), Positives = 153/240 (63%), Gaps = 9/240 (3%)
Query: 16 IIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIA 74
+I + F Y P+++LVIYSFN K + VW G+S RWY +LF S I A S+ IA
Sbjct: 14 VILTVGYTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYTQLFNDSAMI-SAVGLSLTIA 72
Query: 75 LISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKL 133
S+ ++ ++GT A+ + F F+G M PLV+PD+I G+SLL++F + +
Sbjct: 73 AASATMAVVLGTIAAVVMVRFGRFRGSTGFAFMLTAPLVMPDVITGLSLLLLFVAMGHAI 132
Query: 134 G------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPM 187
G + TI++AH TF YV ++ SRL E D SI EAA DLGAT + + +PM
Sbjct: 133 GWPAERGMFTIWLAHVTFCTAYVTVVISSRLRELDRSIEEAAMDLGATPLKVFFVITVPM 192
Query: 188 LLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
+ PA+IS +L+A TLS DD VI FV+GPG++TLP+ ++S +R+GV+P +NAL+ +++++
Sbjct: 193 IAPALISGWLLAFTLSLDDLVIASFVAGPGATTLPMLVFSSVRMGVNPEINALATLILLV 252
>gi|153947049|ref|YP_001401607.1| putrescine ABC transporter, permease protein [Yersinia
pseudotuberculosis IP 31758]
gi|152958544|gb|ABS46005.1| putrescine ABC transporter, permease protein [Yersinia
pseudotuberculosis IP 31758]
Length = 281
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 101/240 (42%), Positives = 153/240 (63%), Gaps = 9/240 (3%)
Query: 16 IIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIA 74
+I + F Y P+++LVIYSFN K + VW G+S RWY +LF S I A S+ IA
Sbjct: 14 VILTVGYTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYTQLFNDSAMI-SAVGLSLTIA 72
Query: 75 LISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKL 133
S+ ++ ++GT A+ + F F+G M PLV+PD+I G+SLL++F + +
Sbjct: 73 AASATMAVVLGTIAAVVMVRFGRFRGSTGFAFMLTAPLVMPDVITGLSLLLLFVAMGHAI 132
Query: 134 G------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPM 187
G + TI++AH TF YV ++ SRL E D SI EAA DLGAT + + +PM
Sbjct: 133 GWPTERGMFTIWLAHVTFCTAYVTVVISSRLRELDRSIEEAAMDLGATPLKVFFVITVPM 192
Query: 188 LLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
+ PA+IS +L+A TLS DD VI FV+GPG++TLP+ ++S +R+GV+P +NAL+ +++++
Sbjct: 193 IAPALISGWLLAFTLSLDDLVIASFVAGPGATTLPMLVFSSVRMGVNPEINALATLILLV 252
>gi|153889979|ref|ZP_02011079.1| Ornithine carbamoyltransferase [Opitutaceae bacterium TAV2]
gi|151583942|gb|EDN47395.1| Ornithine carbamoyltransferase [Opitutaceae bacterium TAV2]
Length = 288
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 98/242 (40%), Positives = 159/242 (65%), Gaps = 2/242 (0%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L +F Y P+IVL++YSFN + ++W GF+ +WY EL ++ I +A SI +A+I++
Sbjct: 43 LVFVFLYAPIIVLMVYSFNTSRLNILWQGFTTKWYGELVRN-RPIMEALTNSIIVAIITT 101
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
+ + I+GT GA L + ++ + ++ + +P+++P+I++G+SLLI F L LG +T+
Sbjct: 102 IAAVILGTTGAWLLYRYRYRFARSIQTLICVPMIMPEIVMGISLLIFFTVLSLPLGFLTV 161
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
IAH TF P+VL V +RL D S+ EAA DLGAT + VI+P L PAI+S LM
Sbjct: 162 SIAHVTFCFPFVLVAVQARLQGLDPSLEEAALDLGATPLRAFWLVIVPCLRPAILSGGLM 221
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKL 258
A TLS D+ +++FF GP S TLPL ++ M ++G++P++NALS I ++ + L ++ L
Sbjct: 222 AFTLSMDELIVSFFTVGPDSRTLPLLVFGMAKVGLNPMLNALSAIFVITTAAFVLFSEYL 281
Query: 259 QK 260
++
Sbjct: 282 RR 283
>gi|86609655|ref|YP_478417.1| spermidine/putrescine ABC transporter, permease protein PotC
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558197|gb|ABD03154.1| spermidine/putrescine ABC transporter, permease protein PotC
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 263
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 101/236 (42%), Positives = 161/236 (68%), Gaps = 7/236 (2%)
Query: 24 FFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVST 82
F YLP++++ +YSFN + G+ W GF+ WY LF+++ +W+A ++ +AL+S+LVST
Sbjct: 19 FLYLPILLIAVYSFNRARFGLAWTGFTFDWYLSLFQNAL-VWQATQNTLVLALVSTLVST 77
Query: 83 IIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF-----KLGIIT 137
++G+ L + F GKK L+ + +LP++VPDI++ ++LL+ + ++F +LG+ T
Sbjct: 78 LLGSLLGYGLYRYRFPGKKILQGLMLLPVIVPDIVMAIALLLFYQFVRFYTGLFELGLGT 137
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
+ +AH TF I +V +V SRL D ++ EAAYDL A Q L V +P+ +P I +A L
Sbjct: 138 MILAHITFQIAFVAIVVRSRLQLLDPALEEAAYDLYANTWQKLRYVTLPLAMPGIQAAAL 197
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTL 253
+A TLS DDFVI+FF SGP S TLP+ IYS R GV+P +NALS ++I+++++L +
Sbjct: 198 LAFTLSIDDFVISFFTSGPESLTLPILIYSTARRGVTPEINALSTLIILVTLILVV 253
>gi|118593583|ref|ZP_01550960.1| spermidine/putrescine ABC transporter, permease component II
protein [Stappia aggregata IAM 12614]
gi|118433801|gb|EAV40461.1| spermidine/putrescine ABC transporter, permease component II
protein [Stappia aggregata IAM 12614]
Length = 274
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 102/242 (42%), Positives = 160/242 (66%), Gaps = 7/242 (2%)
Query: 24 FFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVST 82
F YLP+++LVIYSFN+ + + VW GFS +WY L ++ + + A + ++ +A S+ ++T
Sbjct: 19 FLYLPILLLVIYSFNESRLVTVWGGFSTKWYASLLQN-DQLLDAAWVTLRVAFASATLAT 77
Query: 83 IIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIA 141
IIGT A+ L + F G+ M PLV+P++I+G+SLL++F + + G T+ +A
Sbjct: 78 IIGTIAALVLVRSGRFVGRSLFSGMIFAPLVMPEVILGLSLLLLFVAMDYSRGFWTVMLA 137
Query: 142 HTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALT 201
HTTF YV +V SRL FD SI EAA DLG +T + +P++LP +I+ +++A T
Sbjct: 138 HTTFASCYVAVVVQSRLVGFDKSIEEAAEDLGCPPVKTFFLITLPIILPGVIAGWMLAFT 197
Query: 202 LSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI----SILLTLSTKK 257
LS DD VI F +GPG++TLP++IYS +RLGV+P +NA+ IL+V+ I +++TK+
Sbjct: 198 LSLDDLVIASFTTGPGATTLPMKIYSQVRLGVTPEINAVCTILVVLVTMGVIAASIATKR 257
Query: 258 LQ 259
Q
Sbjct: 258 QQ 259
>gi|15793791|ref|NP_283613.1| polyamine permease inner membrane protein [Neisseria meningitidis
Z2491]
gi|121051756|emb|CAM08060.1| putative polyamine permease inner membrane protein [Neisseria
meningitidis Z2491]
Length = 295
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 104/247 (42%), Positives = 152/247 (61%), Gaps = 16/247 (6%)
Query: 16 IIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIA 74
++ L++ F Y+PL+VLV+YSFN+ K + VW GFS RWY L + ++ I +A + S+ IA
Sbjct: 12 LMLALSLAFLYIPLVVLVVYSFNESKLVTVWGGFSTRWYGALLE-NDTILEAAWLSLRIA 70
Query: 75 LISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIM-------- 125
++SSL + ++GT A+ F+G M P+V+PD+I G+S+L++
Sbjct: 71 VVSSLAAVVLGTLAGYAMARIKRFRGSTLFAGMISAPMVMPDVITGLSMLLLIIQVQIFL 130
Query: 126 -----FATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTL 180
L F G TIF+ HTT + Y+ ++ SRL E D S+ EAA DLGA +
Sbjct: 131 QGSEWLQHLYFDRGFFTIFLGHTTLCMAYITVVIRSRLVELDQSLEEAAMDLGARPLKIF 190
Query: 181 TKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL 240
+ +P++ PAI S FL+ +TLS DD VIT F+SGPGSSTLP I+S I+LG+ P +N L
Sbjct: 191 FVITLPLIAPAIASGFLLGITLSLDDLVITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVL 250
Query: 241 SVILIVI 247
+ ILI I
Sbjct: 251 ATILIGI 257
>gi|46202197|ref|ZP_00053605.2| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Magnetospirillum magnetotacticum MS-1]
Length = 268
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 103/247 (41%), Positives = 155/247 (62%), Gaps = 9/247 (3%)
Query: 9 NRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAF 67
NR + L F YLP+ +LVIYSFN K + VW GFS +WY EL H + + A
Sbjct: 3 NRGFALYSALALVYAFLYLPIALLVIYSFNASKLVTVWGGFSTKWYGELL-HDSQVLDAA 61
Query: 68 YYSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMF 126
+ S+ IA +++ +TI+GT A+ L F + G+ M PLV+P+II G++LL++F
Sbjct: 62 WLSLKIAFVNACSATILGTLAAVVLVRFKRYPGRALFTGMVSAPLVMPEIITGLALLLLF 121
Query: 127 ATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTL 180
++ LG + TI IAH TF++ +V +V SRL + D S+ EAA DLGA
Sbjct: 122 VGMEHLLGWPDGRSMTTIVIAHITFSLSFVTVVVRSRLSQMDMSLEEAAMDLGARPLTVF 181
Query: 181 TKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL 240
++ +P++ PA+ + +L+A TLS DD VI+ FVSGPG++ LP+ I+S +RLGVSP +NAL
Sbjct: 182 LRITLPIIAPALAAGWLLAFTLSVDDVVISAFVSGPGATPLPIVIFSKVRLGVSPEINAL 241
Query: 241 SVILIVI 247
+ I++ +
Sbjct: 242 ATIVVAL 248
>gi|84500628|ref|ZP_00998877.1| putrescine ABC transporter, permease protein [Oceanicola batsensis
HTCC2597]
gi|84391581|gb|EAQ03913.1| putrescine ABC transporter, permease protein [Oceanicola batsensis
HTCC2597]
Length = 271
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 111/243 (45%), Positives = 162/243 (66%), Gaps = 3/243 (1%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F YLP+++LVIYSFN+ K + VW GFS +WY EL ++ + A ++ +AL++S
Sbjct: 14 LGFAFLYLPMVILVIYSFNESKLVTVWAGFSTKWYGELVRNEAFL-DAALVTLQVALLTS 72
Query: 79 LVSTIIGTFGA-IALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
++TI+GT A + ++ F G+ M PLV+PD+I+G+SLL++F L G++T
Sbjct: 73 TLATILGTCAAYVLIRMHRFPGRTLFSGMIYAPLVMPDVILGLSLLLLFIGLNVDRGVLT 132
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
I +AHTTF + YV +V SRL FD S+ EAA DLGAT QT V +P++ PA+IS +L
Sbjct: 133 IVLAHTTFAMCYVSVVVSSRLVAFDRSLEEAALDLGATPFQTFRLVTLPIIAPAVISGWL 192
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKK 257
+A TLS DD VI F +GP S+TLP++I+S +RLGVSP +NALS I+I I + ++
Sbjct: 193 LAFTLSLDDLVIASFTAGPSSTTLPMKIFSAVRLGVSPEINALSTIMIAIVTVGVITASL 252
Query: 258 LQK 260
+ K
Sbjct: 253 VSK 255
>gi|113939299|ref|ZP_01425156.1| binding-protein-dependent transport systems inner membrane
component [Herpetosiphon aurantiacus ATCC 23779]
gi|113899101|gb|EAU18106.1| binding-protein-dependent transport systems inner membrane
component [Herpetosiphon aurantiacus ATCC 23779]
Length = 293
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 99/254 (38%), Positives = 155/254 (61%), Gaps = 14/254 (5%)
Query: 19 ILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALIS 77
I F Y+P+IVLV++SFN K G W GF+L+WY ELF + + A + S+ IA S
Sbjct: 38 IFVYTFLYVPIIVLVLFSFNAAKVGSQWQGFTLQWYNELFADAR-LGDALWTSLKIAGSS 96
Query: 78 SLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFK----- 132
+L++T IGT A+AL+ + G+K LP+++PD+++ VSLL F TL F+
Sbjct: 97 TLIATTIGTLAALALEKRGWWGRKTFDTALYLPVIIPDVVMAVSLLGFF-TLAFRQFQAL 155
Query: 133 ------LGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIP 186
+G+ T+ I+H FNI +V +V + L FD + EAA DLGAT QT ++ P
Sbjct: 156 IGLNLAMGLWTVIISHVAFNISFVTVVVGTSLANFDRRLEEAAADLGATPWQTFWRIKFP 215
Query: 187 MLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIV 246
++ P ++ L++ TLS DDFV+TFF GPG +TL +Y I+ +SP +NA+S ++++
Sbjct: 216 LIGPGVLGGALLSFTLSLDDFVVTFFTRGPGVNTLTTEVYGRIKKSISPEINAISSLMLL 275
Query: 247 ISILLTLSTKKLQK 260
S L +++ +Q+
Sbjct: 276 ASTTLVVTSLWMQR 289
>gi|152984554|ref|YP_001346916.1| polyamine transport protein PotC [Pseudomonas aeruginosa PA7]
gi|150959712|gb|ABR81737.1| polyamine transport protein PotC [Pseudomonas aeruginosa PA7]
Length = 256
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 100/246 (40%), Positives = 167/246 (67%), Gaps = 5/246 (2%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L +F Y+PL+++V+YSFND + W GF+L WY++LF + ++ +A S+ IAL+S+
Sbjct: 13 LVYLFLYVPLVIVVLYSFNDSRLNAEWVGFTLDWYRKLFG-NRDMLQAAANSLVIALVSA 71
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
V+T++GT +AL F + L + + P+ +P++++GVSL+I F L LG++++
Sbjct: 72 SVATLLGTLAGVALHRFKLR---VLPLLVLTPIAIPELLMGVSLVIFFIGLNMSLGMLSV 128
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
+AH TF++ +V +V +R+ D S+ EAA DLGAT Q+ V +P+++P +++ LM
Sbjct: 129 TLAHITFSVGFVALVVQARMSGMDESLTEAARDLGATPWQSFRLVTLPLIMPGMVAGALM 188
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKL 258
A TLS DDFVITFF +G G +TLP +IY+MI++ V+P VNA+S +L+++++ L + KL
Sbjct: 189 AFTLSIDDFVITFFTAGGGFATLPTQIYTMIKIAVTPEVNAVSTLLMLLTLALIVIASKL 248
Query: 259 QKNFIK 264
+ IK
Sbjct: 249 SPSAIK 254
>gi|126698610|ref|YP_001087507.1| putative spermidine/putrescine ABC transporter,permease protein
[Clostridium difficile 630]
gi|145955846|ref|ZP_01804847.1| hypothetical protein CdifQ_04001055 [Clostridium difficile
QCD-32g58]
gi|115250047|emb|CAJ67867.1| putative spermidine/putrescine ABC transporter,permease protein
[Clostridium difficile 630]
Length = 242
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 95/223 (42%), Positives = 146/223 (65%), Gaps = 2/223 (0%)
Query: 26 YLPLIVLVIYSFNDGKGMV-WNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTII 84
Y P+ LV++SFND K M WNGF+ +WY +L ++ + I A YY+I IA+++S++STI+
Sbjct: 2 YAPIFALVLFSFNDSKSMARWNGFTWKWYGQLLQNES-IMSALYYTIVIAILASVISTIV 60
Query: 85 GTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTT 144
GT AI + K KK + N++ LP++ +I+ V+L+ +F +K + G T+ +AH
Sbjct: 61 GTISAIGIHKMRGKSKKLILNVNYLPILNTEIVTAVALMSLFVFVKMEFGFTTMLLAHIM 120
Query: 145 FNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSF 204
F +PYV+ VL ++ + +I +AA DLGAT L KVI+P + P I+S FL+A T+S
Sbjct: 121 FCLPYVILSVLPKMKQLPDNIEDAAMDLGATPIYALRKVILPQIKPGIVSGFLIAFTMSI 180
Query: 205 DDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
DDF+I+FF +G G S L + IY M R G+ P +NALS I+ +
Sbjct: 181 DDFIISFFNAGNGVSNLSIEIYGMARRGIKPEINALSTIMFAV 223
>gi|86607036|ref|YP_475799.1| spermidine/putrescine ABC transporter, permease protein PotC
[Synechococcus sp. JA-3-3Ab]
gi|86555578|gb|ABD00536.1| spermidine/putrescine ABC transporter, permease protein PotC
[Synechococcus sp. JA-3-3Ab]
Length = 257
Score = 167 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 102/244 (41%), Positives = 163/244 (66%), Gaps = 7/244 (2%)
Query: 24 FFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVST 82
F YLP++++ +YSFN + G+VW GF+ WY LF+++ IW+A ++ +A +S+LVST
Sbjct: 8 FLYLPILLIAVYSFNRARFGLVWTGFTFDWYWALFRNAA-IWQATQNTLVLAGVSTLVST 66
Query: 83 IIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLK-----FKLGIIT 137
++G+ L + F G+K ++ + +LP+VVPDI++ ++LL+ + ++ F+LG+ T
Sbjct: 67 LLGSLLGYGLYRYRFPGQKAVQGLLLLPVVVPDIVMAITLLLFYQLVRAYTGWFELGLGT 126
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
+ IAH TF I +V +V SRL D ++ EAAYDL A Q L V +P+ +P I++A L
Sbjct: 127 MVIAHITFQIAFVAIVVRSRLQLLDPALEEAAYDLYANTWQKLRYVTLPLAMPGILAAAL 186
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKK 257
+A TLS DDFVI+FF SGP S TLP+ IYS R GV+P +NALS +++ I+++ +
Sbjct: 187 LAFTLSIDDFVISFFTSGPESQTLPILIYSTARRGVTPEINALSTVIVAITLVAVMGFPL 246
Query: 258 LQKN 261
L ++
Sbjct: 247 LSRS 250
>gi|85706008|ref|ZP_01037104.1| putrescine ABC transporter, permease protein [Roseovarius sp. 217]
gi|85669596|gb|EAQ24461.1| putrescine ABC transporter, permease protein [Roseovarius sp. 217]
Length = 271
Score = 167 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 105/243 (43%), Positives = 157/243 (64%), Gaps = 3/243 (1%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F YLP+I+L+ YSFN+ K + VW GFS +WY EL + + + A + ++ +A+ SS
Sbjct: 14 LGFAFLYLPMIILITYSFNESKLVTVWAGFSTKWYGELLSNQSFL-DAAWVTVKVAVASS 72
Query: 79 LVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
++TI+GT A+ L + F G+ M PLV+P++I G+SLL++F + GI T
Sbjct: 73 TIATILGTMAALVLVRAGRFYGRTLFSGMIYAPLVMPEVITGLSLLLLFIGIGLDRGIFT 132
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
I +AHTTF++ +V +V SRL FD S+ EAA DLG + V +P++ PA+IS +L
Sbjct: 133 IILAHTTFSMCFVSVVVSSRLATFDRSLEEAALDLGCSAFDAFRLVTLPIIAPAVISGWL 192
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKK 257
+A TLS DD VI F +GP ++TLP++I+S +RLGVSP +NALS I+I I + +S
Sbjct: 193 LAFTLSLDDLVIASFTAGPSATTLPIKIWSAVRLGVSPEINALSTIMIGIVAVGVISASL 252
Query: 258 LQK 260
+ K
Sbjct: 253 ITK 255
>gi|33593339|ref|NP_880983.1| putative inner membrane permease polyamine transport protein
[Bordetella pertussis Tohama I]
gi|33602387|ref|NP_889947.1| putative inner membrane permease polyamine transport protein
[Bordetella bronchiseptica RB50]
gi|33572695|emb|CAE42618.1| putative inner membrane permease polyamine transport protein
[Bordetella pertussis Tohama I]
gi|33576826|emb|CAE33906.1| putative inner membrane permease polyamine transport protein
[Bordetella bronchiseptica RB50]
Length = 269
Score = 167 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 98/252 (38%), Positives = 157/252 (62%), Gaps = 9/252 (3%)
Query: 16 IIFILAMIFFYLPLIVLVIYSFNDGKGMV-WNGFSLRWYKELFKHSNNIWKAFYYSIFIA 74
++ L F Y+P+I L+++SFND + W GFSLRWY L + S + +A + S IA
Sbjct: 11 LVLGLGYFFLYVPIISLMVFSFNDSPVVTSWTGFSLRWYGSLLEDSA-LLRAAWLSFKIA 69
Query: 75 LISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKL 133
++++ +TIIGT+ L + F+G M PLV+P++++G+SLL+MF ++ L
Sbjct: 70 VLTATAATIIGTWAGYVLGRMGRFRGFTLYVGMLSAPLVIPEVVLGISLLLMFVEMRGHL 129
Query: 134 G------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPM 187
G + TI++ H T + +V +V SR+ + D S+ EAA DLGAT + + +P+
Sbjct: 130 GWPEQNGVFTIWVGHVTLCMAFVAVVVQSRIRDMDRSLEEAALDLGATPIKVFFAITLPL 189
Query: 188 LLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
+ PA++SA+L+A TLS DD VI F+SGPGSSTLP+ ++S +RLG+ P +NAL+ + I+
Sbjct: 190 IAPALVSAWLLAFTLSLDDVVIASFLSGPGSSTLPMEVFSRVRLGLKPEINALATLFILA 249
Query: 248 SILLTLSTKKLQ 259
+ +LQ
Sbjct: 250 VGTCVIIANRLQ 261
>gi|156934392|ref|YP_001438308.1| hypothetical protein ESA_02223 [Enterobacter sakazakii ATCC
BAA-894]
gi|156532646|gb|ABU77472.1| hypothetical protein ESA_02223 [Enterobacter sakazakii ATCC
BAA-894]
Length = 270
Score = 167 bits (422), Expect = 8e-40, Method: Composition-based stats.
Identities = 94/242 (38%), Positives = 168/242 (69%), Gaps = 2/242 (0%)
Query: 24 FFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVST 82
+ Y+P+++L++ SFN + G+ W GF+ WY L +++++ +A +S+ +A+ S+ +T
Sbjct: 17 YLYIPIVILIVNSFNSSRFGINWQGFTTNWY-SLLMNNDSLLQAAQHSLTMAVFSATFAT 75
Query: 83 IIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAH 142
IIG A+AL + F+GK ++ M + ++ PDI++ +SLL++F + +LG ++ +H
Sbjct: 76 IIGALTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLVGIQLGFWSLLFSH 135
Query: 143 TTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTL 202
TF +P+V+ V SRL FD ++EAA DLGA+ L K+I+P+ +PA+ + +L++ TL
Sbjct: 136 ITFCLPFVVVTVYSRLKGFDVRMLEAARDLGASEITILRKIILPLAMPAVAAGWLLSFTL 195
Query: 203 SFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNF 262
S DD V++ FV+GPG LPL+IYSM+++GVSP VNAL+ IL+++S++L L+++ + ++
Sbjct: 196 SMDDVVVSSFVTGPGYEILPLKIYSMVKVGVSPEVNALATILLMLSLVLVLASQLMLRDK 255
Query: 263 IK 264
K
Sbjct: 256 TK 257
>gi|50121598|ref|YP_050765.1| putrescine transport system permease protein [Erwinia carotovora
subsp. atroseptica SCRI1043]
gi|49612124|emb|CAG75574.1| putrescine transport system permease protein [Erwinia carotovora
subsp. atroseptica SCRI1043]
Length = 281
Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats.
Identities = 108/250 (43%), Positives = 159/250 (63%), Gaps = 10/250 (4%)
Query: 10 RRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFY 68
R +I +L F Y P+++LVIYSFN K + VW G+S RWY ELF H+ + A +
Sbjct: 8 RSPWRIVILVLCFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYIELF-HNTAMISAVF 66
Query: 69 YSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFA 127
S+ IA S+ ++ I+GT A+ + F F+G M PLV+PD+I G+SLL++F
Sbjct: 67 LSLTIAAASATMAVILGTIAAVVMVRFGRFRGANGFAFMLTAPLVMPDVITGLSLLLLFV 126
Query: 128 TLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLT 181
L +G + TI++AH TF YV ++ +RL E D SI EAA DLGA +
Sbjct: 127 ALGHAIGWPAERGMFTIWLAHVTFCTAYVTVVISARLRELDRSIEEAAMDLGANPLKVFF 186
Query: 182 KVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL- 240
+ +PM+ PA++S +L+A TLS DD VI FV+GPGS+TLP+ ++S +R+GV+P +NAL
Sbjct: 187 IITVPMIAPALLSGWLLAFTLSLDDLVIASFVAGPGSTTLPMLVFSSVRMGVNPQINALA 246
Query: 241 SVILIVISIL 250
S+IL+V+ I+
Sbjct: 247 SLILLVVGII 256
>gi|91975911|ref|YP_568570.1| binding-protein-dependent transport systems inner membrane
component [Rhodopseudomonas palustris BisB5]
gi|91682367|gb|ABE38669.1| binding-protein-dependent transport systems inner membrane
component [Rhodopseudomonas palustris BisB5]
Length = 271
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 100/245 (40%), Positives = 160/245 (65%), Gaps = 4/245 (1%)
Query: 14 SFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIF 72
+ + L + F YLP++VLV+YSFND + + VW G+SLRWY+E F+ + + A + S+
Sbjct: 12 NLVSLTLGLAFLYLPIVVLVVYSFNDSRLVTVWGGWSLRWYREFFQ-DDAMLAASWMSLR 70
Query: 73 IALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF 131
+AL S+ + ++GT A+AL + F+G+ M PLV+P++I G+SLL++F L
Sbjct: 71 VALASATAAAVLGTLAAVALSRAGSFRGRTLFSGMLYAPLVMPEVITGLSLLLLFVALNA 130
Query: 132 KLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPA 191
+ G T+ IAHTT + +V +V SRL D S+ EAA DLG + + +P++ PA
Sbjct: 131 ERGFWTVAIAHTTLTMCFVAVVVQSRLGSLDRSVEEAAMDLGCGPVEAFFQATLPLIWPA 190
Query: 192 IISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL-SVILIVISIL 250
I + +++A LS DD VI F +GPGS+TLP+RIYS +RLGV P +NA+ ++I+ V++I
Sbjct: 191 IAAGWMLAFALSLDDLVIASFTTGPGSATLPIRIYSEVRLGVKPEINAICTLIIAVVTIA 250
Query: 251 LTLST 255
+ +++
Sbjct: 251 IVIAS 255
>gi|91794378|ref|YP_564029.1| binding-protein-dependent transport systems inner membrane
component [Shewanella denitrificans OS217]
gi|91716380|gb|ABE56306.1| binding-protein-dependent transport systems inner membrane
component [Shewanella denitrificans OS217]
Length = 269
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 109/264 (41%), Positives = 167/264 (63%), Gaps = 15/264 (5%)
Query: 11 RKTSF--IIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAF 67
+K SF I+ L +IF Y P+ +L+ YSFN K + VW GFS +WY ELF+ I A
Sbjct: 2 KKLSFSNIMLWLGLIFLYAPMFILIFYSFNGSKLVTVWGGFSTKWYSELFE-DQQILDAV 60
Query: 68 YYSIFIALISSLVSTIIGTFGAIALKWFDFK-GKKYLKNMSVLPLVVPDIIIGVSLLIMF 126
+ S+ IA S+ ++ IIGT A + F GK L NM PLV+P++I G+SL+++F
Sbjct: 61 WTSLQIAFYSASMAVIIGTMAAFVMTRFRRSWGKITLSNMITAPLVMPEVITGLSLMLLF 120
Query: 127 ATLK------FKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTL 180
+ + G++T+++AH+TF YV +V SRL + D SI EAA DLGAT +T
Sbjct: 121 VHMADLIGWPTQRGMLTVWLAHSTFCAAYVAVVVSSRLRDLDLSIEEAAMDLGATPFKTF 180
Query: 181 TKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL 240
++ +PM+ PA+ + +L++ +LS DD VI F SGPG++TLP+ ++S +RLGVSP +NAL
Sbjct: 181 MQITVPMIAPALSAGWLLSFSLSLDDLVIASFASGPGATTLPMIVFSSVRLGVSPKINAL 240
Query: 241 SVILI----VISILLTLSTKKLQK 260
+ ++I +I+ LL ++ +K
Sbjct: 241 ATLIILSVSLIAFLLWFFARRAEK 264
>gi|16764242|ref|NP_459857.1| putrescine transporter [Salmonella typhimurium LT2]
gi|56414030|ref|YP_151105.1| putrescine transport system permease protein PotI [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|62179443|ref|YP_215860.1| ABC superfamily (membrane), putrescine transporter [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|16419389|gb|AAL19816.1| putrescine transporter [Salmonella typhimurium LT2]
gi|56128287|gb|AAV77793.1| putrescine transport system permease protein PotI [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|62127076|gb|AAX64779.1| ABC superfamily (membrane), putrescine transporter [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
Length = 281
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 102/244 (41%), Positives = 155/244 (63%), Gaps = 9/244 (3%)
Query: 10 RRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFY 68
R +I +L F Y P+++LVIYSFN K + VW G+S RWY ELF+ + + A
Sbjct: 8 RSPWRILILVLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELFRDTA-MMSAVG 66
Query: 69 YSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFA 127
S+ IA ++ ++ ++GT A+ + F F+G M PLV+PD+I G+SLL++F
Sbjct: 67 LSLTIAACAATMAVVLGTIAAVVMVRFGRFRGANGFAFMITAPLVMPDVITGLSLLLLFV 126
Query: 128 TLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLT 181
L +G ++TI++AH TF YV ++ SRL E D SI EAA DLGA +
Sbjct: 127 ALGHAIGWPSDRGMLTIWLAHVTFCTAYVAVVIASRLRELDRSIEEAAMDLGAAPLKVFF 186
Query: 182 KVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALS 241
+ +PM++PA+IS +L+A TLS DD VI FVSGPG++TLP+ ++S +R+GV+P +NAL+
Sbjct: 187 VITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALA 246
Query: 242 VILI 245
+++
Sbjct: 247 TLIL 250
>gi|120555053|ref|YP_959404.1| binding-protein-dependent transport systems inner membrane
component [Marinobacter aquaeolei VT8]
gi|120324902|gb|ABM19217.1| binding-protein-dependent transport systems inner membrane
component [Marinobacter aquaeolei VT8]
Length = 272
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 102/240 (42%), Positives = 155/240 (64%), Gaps = 9/240 (3%)
Query: 14 SFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIF 72
S + +L M+F YLP++VL++YSFN + + VW GFS +WY L + I A + S+
Sbjct: 10 SKTMLMLGMLFLYLPMVVLIVYSFNASRLVSVWAGFSTKWYGALLANEQ-ILSAVWMSLR 68
Query: 73 IALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF 131
IA S+ ++ +GT A + F +G+ L +M PLV+P++I G+SLL++F +
Sbjct: 69 IAFYSASMAVCLGTLCAFVITRFKKMRGRTLLSSMITAPLVMPEVITGLSLLLLFVQMAQ 128
Query: 132 KLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVII 185
+G + TI+IAHTTF YV +V +RL E D SI EAA DLG T +T + +
Sbjct: 129 LIGWPTDRGMATIWIAHTTFCSAYVAVVVSARLREVDRSIEEAAMDLGCTPLKTFFVITL 188
Query: 186 PMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
P++ PA++S +L+A TLS DD VI FVSGPG++TLP+ ++S +R+GVSP +NAL+ ++I
Sbjct: 189 PVIAPALVSGWLLAFTLSLDDLVIASFVSGPGATTLPMVVFSSVRMGVSPEINALATLII 248
>gi|17402705|gb|AAL38947.1|AF325836_3 PotC [Salmonella enterica]
Length = 259
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 161/232 (69%), Gaps = 2/232 (0%)
Query: 34 IYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIAL 92
+ SFN + G+ W GF+ +WY EL +++++ +A +S+ +A+ S+ +TIIG+ A+AL
Sbjct: 27 VNSFNSSRFGINWQGFTTKWY-ELLVNNDSLLQAAQHSLTMAIFSATFATIIGSLTAVAL 85
Query: 93 KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVLF 152
+ F+GK ++ M + ++ PDI++ +SLL++F L +LG ++ +H TF +P+V+
Sbjct: 86 YRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVV 145
Query: 153 IVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFF 212
V SRL FD ++EAA DLGA+ L K+I+P+ +PA+ + +L++ TLS DD V++ F
Sbjct: 146 TVYSRLKGFDVRMLEAAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTLSMDDVVVSSF 205
Query: 213 VSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNFIK 264
V+GPG LPL+IYSM+++GVSP VNAL+ +L+ +S+++ ++++ + ++ K
Sbjct: 206 VTGPGYEILPLKIYSMVKVGVSPEVNALATVLLALSLVMVIASQLIARDKTK 257
>gi|16759790|ref|NP_455407.1| putrescine transport system permease protein PotI [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29142437|ref|NP_805779.1| putrescine transport system permease protein PotI [Salmonella
enterica subsp. enterica serovar Typhi Ty2]
gi|25308723|pir||AE0606 putrescine transport system permease protein PotI STY0913
[imported] - Salmonella enterica subsp. enterica serovar
Typhi (strain CT18)
gi|16502083|emb|CAD05319.1| putrescine transport system permease protein PotI [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29138067|gb|AAO69628.1| putrescine transport system permease protein PotI [Salmonella
enterica subsp. enterica serovar Typhi Ty2]
Length = 281
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 102/244 (41%), Positives = 155/244 (63%), Gaps = 9/244 (3%)
Query: 10 RRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFY 68
R +I +L F Y P+++LVIYSFN K + VW G+S RWY ELF+ + + A
Sbjct: 8 RSPWRILILVLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELFRDTA-MMSAVG 66
Query: 69 YSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFA 127
S+ IA ++ ++ ++GT A+ + F F+G M PLV+PD+I G+SLL++F
Sbjct: 67 LSLTIAACAATMAVVLGTIAAVVMVRFGRFRGANGFAFMITAPLVMPDVITGLSLLLLFV 126
Query: 128 TLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLT 181
L +G ++TI++AH TF YV ++ SRL E D SI EAA DLGA +
Sbjct: 127 ALGHTIGWPSDRGMLTIWLAHVTFCTAYVAVVIASRLRELDRSIEEAAMDLGAAPLKVFF 186
Query: 182 KVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALS 241
+ +PM++PA+IS +L+A TLS DD VI FVSGPG++TLP+ ++S +R+GV+P +NAL+
Sbjct: 187 VITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALA 246
Query: 242 VILI 245
+++
Sbjct: 247 TLIL 250
>gi|15676516|ref|NP_273656.1| spermidine/putrescine ABC transporter, permease protein [Neisseria
meningitidis MC58]
gi|121634406|ref|YP_974651.1| putative polyamine permease inner membrane protein [Neisseria
meningitidis FAM18]
gi|7225842|gb|AAF41039.1| spermidine/putrescine ABC transporter, permease protein [Neisseria
meningitidis MC58]
gi|120866112|emb|CAM09850.1| putative polyamine permease inner membrane protein [Neisseria
meningitidis FAM18]
Length = 295
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 104/247 (42%), Positives = 152/247 (61%), Gaps = 16/247 (6%)
Query: 16 IIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIA 74
++ L++ F Y+PL+VLVIYSFN+ K + VW GFS +WY L + ++ I +A + S+ IA
Sbjct: 12 LMLALSLAFLYIPLVVLVIYSFNESKLVTVWGGFSTKWYGALLE-NDTILEAAWLSLRIA 70
Query: 75 LISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIM-------- 125
++SSL + ++GT A+ F+G M P+V+PD+I G+S+L++
Sbjct: 71 VVSSLAAVVLGTLAGYAMARIKRFRGSTLFAGMISAPMVMPDVITGLSMLLLIIQVQIFL 130
Query: 126 -----FATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTL 180
L F G TIF+ HTT + Y+ ++ SRL E D S+ EAA DLGA +
Sbjct: 131 QGSEWLQHLYFDRGFFTIFLGHTTLCMAYITVVIRSRLVELDQSLEEAAMDLGARPLKIF 190
Query: 181 TKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL 240
+ +P++ PAI S FL+ +TLS DD VIT F+SGPGSSTLP I+S I+LG+ P +N L
Sbjct: 191 FVITLPLIAPAIASGFLLGITLSLDDLVITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVL 250
Query: 241 SVILIVI 247
+ ILI I
Sbjct: 251 ATILIGI 257
>gi|15887957|ref|NP_353638.1| hypothetical protein AGR_C_1089 [Agrobacterium tumefaciens str.
C58]
gi|17934523|ref|NP_531313.1| ABC transporter, membrane spanning protein [Agrobacterium
tumefaciens str. C58]
gi|15155559|gb|AAK86423.1| AGR_C_1089p [Agrobacterium tumefaciens str. C58]
gi|17738968|gb|AAL41629.1| ABC transporter, membrane spanning protein [Agrobacterium
tumefaciens str. C58]
Length = 270
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 101/240 (42%), Positives = 156/240 (65%), Gaps = 3/240 (1%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ R K + L F Y+P+I+L+IYSFN K + VW GFSL+WYK ++ + + A
Sbjct: 1 MKRGKFDITVLTLGFAFLYIPIIILIIYSFNASKLVTVWGGFSLQWYKSMWSN-QGLMDA 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWF-DFKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
+ ++ + ++S+ + TI+GT A++L F F G+ M PLV+P++I G+SLL++
Sbjct: 60 AWVTLRVGILSATIGTILGTLAALSLTRFARFPGRVLFSGMIYAPLVMPEVITGLSLLLL 119
Query: 126 FATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVII 185
F + G T+ IAHTTF + YV +V SRL FD S+ EAA DLG +T ++ +
Sbjct: 120 FVAVGVDRGFWTVVIAHTTFTMCYVAIVVQSRLLTFDRSLEEAALDLGCPPVKTFFRITL 179
Query: 186 PMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
P++ PA+I+ +++A TLS DD VI F +GPG++TLP++IYS +RLGV+P +NA+ ILI
Sbjct: 180 PLIFPAVIAGWMLAFTLSLDDLVIASFATGPGATTLPIKIYSQVRLGVTPEINAICTILI 239
>gi|28558951|ref|NP_788211.1| putative putrescine ABC transporter permease protein [Ruegeria sp.
PR1b]
gi|22726502|gb|AAN05297.1| RC224 [Ruegeria sp. PR1b]
Length = 267
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 106/239 (44%), Positives = 152/239 (63%), Gaps = 9/239 (3%)
Query: 17 IFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIAL 75
I + +F Y P++ LV+YSFN+ K + VW GFS +WY EL + I +A + S+ IA
Sbjct: 11 IGVAGFVFLYAPIVSLVVYSFNESKLVTVWGGFSTKWYGELLRDPQ-ILEAAWLSLRIAF 69
Query: 76 ISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF--- 131
S+ ++ IGT A L F F+ K L M PLV+P++IIG+SLL++F L+
Sbjct: 70 ASATLAIFIGTLAAFVLTRFSRFRVKTLLGGMITAPLVMPEVIIGLSLLLLFVALQGLTG 129
Query: 132 ---KLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPML 188
+ G++TI IAH TF Y ++ SRL + D S+ EA DLGA + V +P++
Sbjct: 130 WPGQRGVMTIIIAHATFGAAYSAVVIQSRLTDMDLSLEEAGQDLGAHPARVFFDVTLPVI 189
Query: 189 LPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
PA++S +L+A TLS DD V+ FVSGPG+STLP+ I+S +RLGVSP VNAL+ ++IVI
Sbjct: 190 APALVSGWLLAFTLSLDDLVVASFVSGPGASTLPMVIFSKVRLGVSPDVNALATVIIVI 248
>gi|126734540|ref|ZP_01750286.1| putrescine ABC transporter, permease protein [Roseobacter sp. CCS2]
gi|126715095|gb|EBA11960.1| putrescine ABC transporter, permease protein [Roseobacter sp. CCS2]
Length = 272
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 108/244 (44%), Positives = 163/244 (66%), Gaps = 7/244 (2%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F Y+P+IV++IYSFN+ + + VW GFS++WY EL ++ + A + + + SS
Sbjct: 14 LGFAFLYIPMIVVIIYSFNESRLVTVWGGFSIKWYGELLQNEAFL-DAAWVTFKVGFFSS 72
Query: 79 LVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
+++TI+GT GA L + F G+ M PLV+P++I G+SLL++F ++ G+ T
Sbjct: 73 IIATILGTMGAYVLVRGGRFYGRTLFSGMIYAPLVMPEVITGLSLLLLFISIGLDRGLFT 132
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
I +AH TF++ YV +V SRL FD S+ EAA DLG T + V +P++ PA+IS +L
Sbjct: 133 IVLAHATFSMCYVSVVVSSRLVSFDRSVEEAALDLGCTPFEAFRLVTLPIIAPAVISGWL 192
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI----VISILLTL 253
+ALTLS DD VI FV+GP ++TLP++++S IRLGVSP +NALS ILI + +I +L
Sbjct: 193 LALTLSLDDLVIASFVAGPSATTLPIKVFSSIRLGVSPEINALSTILIGLVTIGTIAASL 252
Query: 254 STKK 257
+TK+
Sbjct: 253 TTKR 256
>gi|86748581|ref|YP_485077.1| Binding-protein-dependent transport systems inner membrane
component [Rhodopseudomonas palustris HaA2]
gi|86571609|gb|ABD06166.1| Binding-protein-dependent transport systems inner membrane
component [Rhodopseudomonas palustris HaA2]
Length = 271
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 100/245 (40%), Positives = 157/245 (64%), Gaps = 4/245 (1%)
Query: 14 SFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIF 72
+ + L + F YLP++++VIYSFND + + VW G+SLRWY+EL + + A + S+
Sbjct: 12 NLVSLTLGLAFLYLPIVIMVIYSFNDSRLVTVWGGWSLRWYRELLQ-DEAMLAAAWMSLK 70
Query: 73 IALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF 131
+AL S+ + + GT A+AL + F+G M PLV+P++I G+SLL++F L
Sbjct: 71 VALASATAAAVFGTLAAVALSRAGHFRGWTLFSGMLYAPLVMPEVITGLSLLLLFVALNA 130
Query: 132 KLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPA 191
+ G T+ IAHTT + +V +V SRL D S+ EAA DLG + + +P++ PA
Sbjct: 131 ERGFWTVTIAHTTLTMCFVAVVVQSRLHALDRSVEEAAMDLGCGPVEAFLQATVPLIWPA 190
Query: 192 IISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL-SVILIVISIL 250
I + +++A LS DD VI F +GPGS+TLP+RIYS IRLGV P +NA+ ++I+ V+++
Sbjct: 191 IAAGWMLAFALSLDDLVIASFTTGPGSATLPIRIYSEIRLGVKPQINAVCTLIIAVVALA 250
Query: 251 LTLST 255
+ L++
Sbjct: 251 IVLAS 255
>gi|59800649|ref|YP_207361.1| putative ABC transporter, permease protein, polyamine [Neisseria
gonorrhoeae FA 1090]
gi|59717544|gb|AAW88949.1| putative ABC transporter, permease protein, polyamine [Neisseria
gonorrhoeae FA 1090]
Length = 295
Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 104/247 (42%), Positives = 152/247 (61%), Gaps = 16/247 (6%)
Query: 16 IIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIA 74
++ L++ F Y+PL+VLVIYSFN+ K + VW GFS +WY L + ++ I +A + S+ IA
Sbjct: 12 LMLALSLAFLYIPLVVLVIYSFNESKLVTVWGGFSTKWYGALLE-NDTILEAAWLSLRIA 70
Query: 75 LISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIM-------- 125
++SSL + ++GT A+ F+G M P+V+PD+I G+S+L++
Sbjct: 71 VVSSLAAVVLGTLAGYAMARIKRFRGSTLFAGMISAPMVMPDVITGLSMLLLIIQVQIFL 130
Query: 126 -----FATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTL 180
L F G TIF+ HTT + Y+ ++ SRL E D S+ EAA DLGA +
Sbjct: 131 QGSEWLQHLYFDRGFFTIFLGHTTLCMAYITVVIRSRLVELDQSLEEAAMDLGARPLKIF 190
Query: 181 TKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL 240
+ +P++ PAI S FL+ +TLS DD VIT F+SGPGSSTLP I+S I+LG+ P +N L
Sbjct: 191 FVITLPLIAPAIASGFLLGITLSLDDLVITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVL 250
Query: 241 SVILIVI 247
+ ILI I
Sbjct: 251 ATILIGI 257
>gi|146311029|ref|YP_001176103.1| binding-protein-dependent transport systems inner membrane
component [Enterobacter sp. 638]
gi|145317905|gb|ABP60052.1| binding-protein-dependent transport systems inner membrane
component [Enterobacter sp. 638]
Length = 281
Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 108/250 (43%), Positives = 162/250 (64%), Gaps = 10/250 (4%)
Query: 10 RRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFY 68
R +I +L+ F Y P+++LVIYSFN K + VW G+S RWY ELF+ S + A
Sbjct: 8 RSPWRILILVLSFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELFRDSA-MMSAVG 66
Query: 69 YSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFA 127
S+ IA ++ ++ ++GT A+ + F F+G M PLV+PD+I G+SLL++F
Sbjct: 67 LSLTIAACAATMACVLGTIAALVMVRFGRFRGSTGFAFMITAPLVMPDVITGLSLLLLFV 126
Query: 128 TLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLT 181
L +G ++TI++AH TF YV ++ SRL E D+SI EAA DLGAT +
Sbjct: 127 ALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVISSRLRELDHSIEEAAMDLGATPVKVFF 186
Query: 182 KVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL- 240
+ +PM++PA+IS +L+A TLS DD VI FVSGPG++TLP+ ++S +R+GV+P +NAL
Sbjct: 187 IITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALA 246
Query: 241 SVILIVISIL 250
S+IL V+ ++
Sbjct: 247 SIILGVVGVV 256
>gi|52841373|ref|YP_095172.1| spermidine/putrescine ABC transporter permease protein PotC
[Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|52628484|gb|AAU27225.1| spermidine/putrescine ABC transporter permease protein PotC
[Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 255
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 107/252 (42%), Positives = 169/252 (67%), Gaps = 2/252 (0%)
Query: 13 TSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSI 71
T + L F Y+P+ +LV+YS ND K + W+GFSLRWYKELF H +W A + SI
Sbjct: 5 TQRLFLSLVYAFLYIPIAILVLYSVNDAKFSLQWHGFSLRWYKELF-HDRGLWSAVFNSI 63
Query: 72 FIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF 131
+ L SSL++T +G +I L F + ++ L + +L +++PDI++GV+LLI F +
Sbjct: 64 TLGLTSSLIATTMGLLASINLFLFRTRHRQILYTLLLLLIIIPDIVLGVALLIFFNITQV 123
Query: 132 KLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPA 191
LG +++ +AH TF+IP+V+ + SR++ + +I A DLGA+ LT+V++P+L PA
Sbjct: 124 PLGFLSLLVAHITFSIPFVILTINSRINTLNPNIYFGALDLGASRYFALTRVLLPLLWPA 183
Query: 192 IISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILL 251
++SAFL++ TLSFDD +I++FV+GP + LPL IYS++R GV+P +NAL I V+S++L
Sbjct: 184 VLSAFLLSFTLSFDDVIISYFVAGPDFTILPLTIYSLVRAGVTPELNALCSITFVLSMIL 243
Query: 252 TLSTKKLQKNFI 263
+ + +L I
Sbjct: 244 VIISHRLSGKLI 255
>gi|15806322|ref|NP_295028.1| spermidine/putrescine ABC transporter, permease protein
[Deinococcus radiodurans R1]
gi|6459052|gb|AAF10874.1|AE001977_7 spermidine/putrescine ABC transporter, permease protein
[Deinococcus radiodurans R1]
Length = 270
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 95/234 (40%), Positives = 148/234 (63%), Gaps = 11/234 (4%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F YLP++VL+++SFND K G W GF+ +WY LF + + +A ++ +A+ S+
Sbjct: 15 LTYAFLYLPILVLIVFSFNDSKFGATWQGFTTKWYSVLFARPD-VREAVTNTLLVAVGST 73
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLK-------- 130
V+T++GT L F+G+ L + V+P+V+PD+++GV LL+ +A ++
Sbjct: 74 AVATVLGTLVGFGLWRGGFRGRLPLTFLLVMPIVIPDVVMGVMLLMFYALVRGLLERTGW 133
Query: 131 -FKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
F+ G T+ +AH TF + YV V SRL + + EAA DLGAT Q+ +VI+P+ L
Sbjct: 134 TFENGFWTVMLAHVTFQLSYVALNVRSRLAGYGRELEEAAADLGATPVQSFFQVILPLAL 193
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVI 243
P ++S L+A TLS DDFV+T+F SG G TLP+ IY+ ++ GV+P +NALS +
Sbjct: 194 PGVLSGALLAFTLSLDDFVVTYFTSGSGFKTLPVLIYTSVKKGVTPDINALSAM 247
>gi|33596326|ref|NP_883969.1| putative inner membrane permease polyamine transport protein
[Bordetella parapertussis 12822]
gi|33566095|emb|CAE36995.1| putative inner membrane permease polyamine transport protein
[Bordetella parapertussis]
Length = 269
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 98/252 (38%), Positives = 157/252 (62%), Gaps = 9/252 (3%)
Query: 16 IIFILAMIFFYLPLIVLVIYSFNDGKGMV-WNGFSLRWYKELFKHSNNIWKAFYYSIFIA 74
++ L F Y+P+I L+++SFND + W GFSLRWY L + S + +A + S IA
Sbjct: 11 LVLGLGYFFLYVPIISLMVFSFNDSPVVTSWTGFSLRWYGLLLEDSA-LLRAAWLSFKIA 69
Query: 75 LISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKL 133
++++ +TIIGT+ L + F+G M PLV+P++++G+SLL+MF ++ L
Sbjct: 70 VLTATAATIIGTWAGYVLGRMGRFRGFTLYVGMLSAPLVIPEVVLGISLLLMFVEMRGHL 129
Query: 134 G------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPM 187
G + TI++ H T + +V +V SR+ + D S+ EAA DLGAT + + +P+
Sbjct: 130 GWPEQNGVFTIWVGHVTLCMAFVAVVVQSRIRDMDRSLEEAALDLGATPIKVFFAITLPL 189
Query: 188 LLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
+ PA++SA+L+A TLS DD VI F+SGPGSSTLP+ ++S +RLG+ P +NAL+ + I+
Sbjct: 190 IAPALVSAWLLAFTLSLDDVVIASFLSGPGSSTLPMEVFSRVRLGLKPEINALATLFILA 249
Query: 248 SILLTLSTKKLQ 259
+ +LQ
Sbjct: 250 VGTCVIIANRLQ 261
>gi|67155541|ref|ZP_00417169.1| Binding-protein-dependent transport systems inner membrane
component [Azotobacter vinelandii AvOP]
gi|67087342|gb|EAM06809.1| Binding-protein-dependent transport systems inner membrane
component [Azotobacter vinelandii AvOP]
Length = 289
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 103/255 (40%), Positives = 158/255 (61%), Gaps = 12/255 (4%)
Query: 11 RKTSFIIFIL--AMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAF 67
R+ SF +L ++F YLP+I+LV+YSFND + + VW G+SLRWY L + + A
Sbjct: 2 RRPSFSSLMLWAGLLFIYLPMIILVVYSFNDSRLVTVWGGWSLRWYAGLLD-NRQLLGAL 60
Query: 68 YYSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMF 126
S+ +AL S++ + +GT A L F+G+ + PLV+P++I G+SLL++F
Sbjct: 61 GRSLQVALCSAVAAVALGTLAAFVLTRIPRFRGRSLFGGLVTAPLVMPEVITGLSLLLLF 120
Query: 127 ATLK------FKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTL 180
+ + G+ TI+IAHTTF YV IV +RL E D SI EAA DLGA +
Sbjct: 121 VAMAQVVGWPAERGLTTIWIAHTTFCTSYVAVIVSARLRELDLSIEEAAMDLGARPWKVF 180
Query: 181 TKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL 240
+ +PM+ P++ + +++ LS DD V+ FVSGPG++TLP+ I+S +RLGV P +NA+
Sbjct: 181 LLITLPMIAPSLGAGGMLSFALSLDDLVLASFVSGPGATTLPMEIFSAVRLGVKPDINAV 240
Query: 241 -SVILIVISILLTLS 254
S+IL+ +S+ L+
Sbjct: 241 ASLILLAVSLFTFLA 255
>gi|91779159|ref|YP_554367.1| ABC putrescine transporter, inner membrane subunit PotI
[Burkholderia xenovorans LB400]
gi|91691819|gb|ABE35017.1| ABC putrescine transporter, inner membrane subunit PotI
[Burkholderia xenovorans LB400]
Length = 303
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 97/237 (40%), Positives = 150/237 (63%), Gaps = 9/237 (3%)
Query: 17 IFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIAL 75
+ +F Y+P+I LV+YSFN+ K + VW+GFSL+WY L H + A + S+ I L
Sbjct: 12 VLTFGFLFLYIPIISLVVYSFNESKLVTVWSGFSLKWYGALL-HDGELLNAAWLSLKIGL 70
Query: 76 ISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLG 134
+++ S +IGT+ L F F+G M PLV+P++I G+SLL++F L+ LG
Sbjct: 71 LTACASVVIGTWAGFVLARFGRFRGFTLFAGMINAPLVIPEVIQGISLLLLFVALEQMLG 130
Query: 135 ------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPML 188
+ TI+I H + YV +V SR+ E + S+ EAA DLGAT + + +P++
Sbjct: 131 WPKGRGLFTIWIGHVMLCVSYVAIVVQSRVKELNKSLEEAALDLGATPFKVFFLITLPLI 190
Query: 189 LPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
A++S +L++ TLSFDD V++ F+SGPGS+TLPL ++S +RLG++P +NAL+ I I
Sbjct: 191 SQALMSGWLLSFTLSFDDLVLSAFLSGPGSTTLPLVVFSRVRLGLNPEMNALATIFI 247
>gi|126738595|ref|ZP_01754300.1| putrescine ABC transporter, permease protein [Roseobacter sp.
SK209-2-6]
gi|126720394|gb|EBA17100.1| putrescine ABC transporter, permease protein [Roseobacter sp.
SK209-2-6]
Length = 271
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 101/230 (43%), Positives = 155/230 (67%), Gaps = 3/230 (1%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F Y+P+++LVI+SFN+ K + VW GFS +WY EL ++ + A + ++ +A++SS
Sbjct: 14 LGFAFLYIPMVILVIFSFNESKLVTVWAGFSTKWYGELLQNEAFL-NAAWVTVKVAVMSS 72
Query: 79 LVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
++T++GT A L + F G+ M PLV+P++I G+SLL++F + G++T
Sbjct: 73 TIATVLGTMAAYVLVRGGRFMGRTLFSGMIYAPLVMPEVITGLSLLLLFIGIGLDRGVMT 132
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
I +AHTTF++ YV +V SRL FD S+ EAA DLG + + V +P++ PA+IS +L
Sbjct: 133 IVLAHTTFSMCYVSVVVSSRLVTFDKSLEEAALDLGCSPSEAFRLVTLPIIAPAVISGWL 192
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
+A TLS DD VI F SGP ++TLP++I+S +RLGVSP +NALS ++I I
Sbjct: 193 LAFTLSLDDLVIASFTSGPSATTLPIKIFSAVRLGVSPEINALSTLMIAI 242
>gi|17402685|gb|AAL38932.1|AF325831_3 PotC [Salmonella enterica]
gi|17402689|gb|AAL38935.1|AF325832_3 PotC [Salmonella enterica]
Length = 259
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 89/232 (38%), Positives = 160/232 (68%), Gaps = 2/232 (0%)
Query: 34 IYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIAL 92
+ SFN + G+ W GF+ +WY+ L ++++ +A +S+ +A+ S+ +T+IG+ A+AL
Sbjct: 27 VNSFNSSRFGINWQGFTTKWYEHLIS-NDSLLQAAQHSLTMAIFSATFATVIGSLTAVAL 85
Query: 93 KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVLF 152
+ F+GK ++ M + ++ PDI++ +SLL++F L + G ++ +H TF +P+V+
Sbjct: 86 YRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQPGFWSLLFSHITFCLPFVVV 145
Query: 153 IVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFF 212
V SRL FD ++EAA DLGA+ L K+I+P+ +PA+ + +L++ TLS DD V++ F
Sbjct: 146 TVYSRLKGFDVRMLEAAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTLSMDDVVVSSF 205
Query: 213 VSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNFIK 264
V+GPG LPL+IYSM+++GVSP VNAL+ IL+V+S+++ ++++ + ++ K
Sbjct: 206 VTGPGYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTK 257
>gi|153094289|gb|EDN75153.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, membrane protein [Mannheimia haemolytica
PHL213]
Length = 255
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 99/246 (40%), Positives = 166/246 (67%), Gaps = 2/246 (0%)
Query: 16 IIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIA 74
+ ++ + Y+P+I+LVI SFN+ + G+ W GF+ WY+ LF + + + +A S+ IA
Sbjct: 8 LFMLVVFAYLYIPIIILVINSFNEDRFGLNWKGFTWNWYERLFSN-DTLVQATLNSLTIA 66
Query: 75 LISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLG 134
++ STI+G +IAL + F+GKK + M + ++ PDI++ VS+L++F L KLG
Sbjct: 67 FFAATFSTILGALTSIALYRYRFRGKKLVGGMLFVVMMSPDIVMAVSMLVLFMILGIKLG 126
Query: 135 IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIIS 194
I++ IAH TF +PYV+ + SRL +FD ++EAA DLGA+ L K+I+P+ LP+IIS
Sbjct: 127 FISLLIAHITFCLPYVVIAISSRLSDFDGKMLEAAKDLGASEVTILRKIILPLALPSIIS 186
Query: 195 AFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLS 254
+L++ T+S DD +++ FV+ P LPL+I+S+++ GV+P VNAL+ I+I+ S+ L +
Sbjct: 187 GWLLSFTISLDDVIVSSFVTSPSYEVLPLKIFSLVKTGVTPEVNALATIMIIFSLTLVVL 246
Query: 255 TKKLQK 260
++ + K
Sbjct: 247 SQLVVK 252
>gi|119775771|ref|YP_928511.1| binding-protein-dependent transport systems inner membrane
component [Shewanella amazonensis SB2B]
gi|119768271|gb|ABM00842.1| binding-protein-dependent transport systems inner membrane
component [Shewanella amazonensis SB2B]
Length = 271
Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 106/250 (42%), Positives = 160/250 (64%), Gaps = 10/250 (4%)
Query: 14 SFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIF 72
S ++ L +IF Y P+ +L+ YSFN K + VW GFS +WY ELFK I A + S+
Sbjct: 7 STVMLWLGLIFLYAPMFILIFYSFNASKLVTVWGGFSAKWYVELFK-DQQILDAVWTSLE 65
Query: 73 IALISSLVSTIIGTFGAIALKWFDFK-GKKYLKNMSVLPLVVPDIIIGVSLLIMFATLK- 130
IA +S+ ++ ++GT A + F K L NM PLV+P++I G+SLL++F +
Sbjct: 66 IAFLSASMAVVLGTMAAFVMTRFRRSWAKLSLSNMITAPLVMPEVITGLSLLLLFVHMAD 125
Query: 131 -----FKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVII 185
+ G +TI++AH+TF YV +V SRL E D SI EAA DLGAT +T + +
Sbjct: 126 LIGWPAERGRLTIWLAHSTFCAAYVAVVVSSRLRELDMSIEEAAMDLGATPLKTFFLITV 185
Query: 186 PMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL-SVIL 244
PM+ PA+ + +L++ +LS DD VI F SGPG++TLP+ ++S +RLGVSP +NAL ++I+
Sbjct: 186 PMIAPALTAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSVRLGVSPKINALATLII 245
Query: 245 IVISILLTLS 254
+ +S++ LS
Sbjct: 246 LAVSLIAFLS 255
>gi|83592351|ref|YP_426103.1| Binding-protein-dependent transport systems inner membrane
component [Rhodospirillum rubrum ATCC 11170]
gi|83575265|gb|ABC21816.1| Binding-protein-dependent transport systems inner membrane
component [Rhodospirillum rubrum ATCC 11170]
Length = 278
Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 101/253 (39%), Positives = 160/253 (63%), Gaps = 11/253 (4%)
Query: 11 RKTSFIIFILAM--IFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAF 67
R+ F++ + F Y+P+++L+IYSFN+ + + VW GFS +WY L + + A
Sbjct: 2 RRNWFLLLTMGFGFAFLYVPILLLMIYSFNESRLVTVWAGFSAKWYGALLR-DEQMLGAA 60
Query: 68 YYSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMF 126
+ S IA++++ ++TI+GT A+A+ F F+G+ M PLV+P++I G++ L++F
Sbjct: 61 WMSFRIAVVNASLATILGTLAALAMVRFGRFRGRTLFSGMLSAPLVMPEVITGLASLLLF 120
Query: 127 ATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTL 180
L+ LG + TI IAH TF+ YV ++ SRL D SI EAA DLGA +
Sbjct: 121 VALEQLLGWPQGRGMTTITIAHITFSTAYVAVVLQSRLQGMDRSIEEAAMDLGARPAKVF 180
Query: 181 TKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL 240
+ IP++ PA+++ +L++ TLS DD VI FVSGP SSTLP+ ++S +RLGVSP +NAL
Sbjct: 181 LLITIPVIAPALVAGWLLSFTLSLDDLVIASFVSGPASSTLPMVVFSSVRLGVSPEINAL 240
Query: 241 SVILIVISILLTL 253
+ IL++ + + L
Sbjct: 241 ATILVLTATVAIL 253
>gi|152969445|ref|YP_001334554.1| putrescine transport protein (ABC superfamily, membrane)
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|150954294|gb|ABR76324.1| putrescine transport protein (ABC superfamily, membrane)
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
Length = 281
Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 104/244 (42%), Positives = 155/244 (63%), Gaps = 9/244 (3%)
Query: 10 RRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFY 68
R +I +L F Y P+++LVIYSFN K + VW G+S RWY ELF H + + A
Sbjct: 8 RSPWRILILVLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYSELF-HDDAMMSAVG 66
Query: 69 YSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFA 127
S+ IA ++ + I+GT A+ + F F+G M PLV+PD+I G+SLL++F
Sbjct: 67 LSLTIAACAATAAAILGTIAAVVMVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFV 126
Query: 128 TLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLT 181
L +G ++TI++AH TF YV ++ SRL E D+SI EAA DLGA +
Sbjct: 127 ALGHAIGWPSDRGMLTIWLAHVTFCTAYVAVVISSRLRELDHSIEEAAMDLGAAPLKVFF 186
Query: 182 KVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALS 241
+ +PM++PA+IS +L+A TLS DD VI FVSGPG++TLP+ ++S +R+GV+P +NAL+
Sbjct: 187 VITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALA 246
Query: 242 VILI 245
+++
Sbjct: 247 TLIL 250
>gi|50365326|ref|YP_053751.1| spermidine/putrescine ABC transporter permease component
[Mesoplasma florum L1]
gi|50363882|gb|AAT75867.1| spermidine/putrescine ABC transporter permease component
[Mesoplasma florum L1]
Length = 1080
Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 91/231 (39%), Positives = 147/231 (63%), Gaps = 5/231 (2%)
Query: 18 FILAMIFFYLPLIVLVIYSFNDGKGMV-WNGFSLRWYKELFKHSNNIWKAFYYSIFIALI 76
F L ++ Y+P+ ++V++SFN G + W GFS RWY+E FK+S I K+ S+F+A++
Sbjct: 10 FALILLVIYVPIGIMVLFSFNSGSSVSNWMGFSTRWYEEFFKNSPFI-KSIITSLFVAVV 68
Query: 77 SSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGII 136
S+++S +IG AI L + + +++ +PL+ DII V+L+++F K GI+
Sbjct: 69 STMISVVIGVMAAIGLSRLTKRKQSKWMSIANIPLINADIITAVALMVVFLICGLKFGIL 128
Query: 137 TIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAF 196
T+ +AH +FN+PYVL V+ RL + D SIVEA+YDLGA + K+I+P+L PAII A
Sbjct: 129 TLIMAHVSFNVPYVLITVMPRLRKVDKSIVEASYDLGAKTSTVIFKIILPILKPAIIIAT 188
Query: 197 LMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
++A +SFDDF+I++F G ++ IYS R + P + A +++ I
Sbjct: 189 IIAFAMSFDDFIISYFTGGAQTNVASF-IYSAKR--IKPYIFAFGTMMVGI 236
>gi|154252001|ref|YP_001412825.1| Ornithine carbamoyltransferase [Parvibaculum lavamentivorans DS-1]
gi|154155951|gb|ABS63168.1| Ornithine carbamoyltransferase [Parvibaculum lavamentivorans DS-1]
Length = 284
Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 91/247 (36%), Positives = 153/247 (61%), Gaps = 8/247 (3%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L + F Y P+I L+ +SFND + +VW GF+ +Y +LF +++ + AF S+ IAL ++
Sbjct: 28 LTLFFLYAPIIGLIAFSFNDSRRNVVWRGFTTDYYVKLF-NNDGLMLAFGNSLTIALFTT 86
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFAT------LKFK 132
ST++G A L + F GK + LP+V+P+I +GV++++ FA + +
Sbjct: 87 FFSTLLGALTAYVLWRYRFPGKAIYEGGMALPIVIPEICMGVAMMVFFARIGWPSGMPWP 146
Query: 133 LGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAI 192
L + I IAH F+ P+ ++ +RL+ F+ + E A DLGA + +++P + P +
Sbjct: 147 LNLSAITIAHIAFSFPFAAIVIRARLESFNRELAECARDLGANEYRVFRDIVVPHMKPGL 206
Query: 193 ISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLT 252
I+ L+A TLS DDFVITFF +GP + T P++IYSM+R V+P VNA S +LI++++++T
Sbjct: 207 IAGALLAFTLSLDDFVITFFTAGPDTVTFPVKIYSMVRFSVTPEVNAASTVLILLTLVVT 266
Query: 253 LSTKKLQ 259
++Q
Sbjct: 267 AFALRMQ 273
>gi|119875622|ref|ZP_01642684.1| binding-protein-dependent transport systems inner membrane
component [Stenotrophomonas maltophilia R551-3]
gi|119821772|gb|EAX24365.1| binding-protein-dependent transport systems inner membrane
component [Stenotrophomonas maltophilia R551-3]
Length = 280
Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 90/229 (39%), Positives = 148/229 (64%), Gaps = 8/229 (3%)
Query: 24 FFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVST 82
F YLP+++L+ YSFN + MVW GFS R Y +LF + A + S+ +A ++ +T
Sbjct: 20 FLYLPILLLMFYSFNSSRLAMVWAGFSTRAYSDLFA-DRALMDAMWTSLVVAFWTACTAT 78
Query: 83 IIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF-----KLGII 136
++GT A+ + F F+GK + PLV+PD+I+G SL+ + A++ G+
Sbjct: 79 VLGTLAAMVMTRFKRFRGKPLFGALVTAPLVMPDVILGFSLMALLASMGAIPGFPARGLT 138
Query: 137 TIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAF 196
TI+IAH TF + +V +V SRL E D S+ EAA DLGA+ ++ +P++ PA+++ +
Sbjct: 139 TIWIAHVTFTLCFVTVVVSSRLQEMDLSLEEAAMDLGASRLTVFGRITLPIIAPALVAGW 198
Query: 197 LMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
L+A TLS DD V+ FV+ PGS+TLP+++++ +R+G+SP +NAL+ +L+
Sbjct: 199 LLAFTLSLDDVVVASFVATPGSTTLPMKVFASVRMGISPKINALATLLV 247
>gi|149126358|ref|ZP_01851230.1| binding-protein-dependent transport systems inner membrane
component [Methylobacterium sp. 4-46]
gi|148516978|gb|EDK90279.1| binding-protein-dependent transport systems inner membrane
component [Methylobacterium sp. 4-46]
Length = 258
Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 100/238 (42%), Positives = 153/238 (64%), Gaps = 3/238 (1%)
Query: 18 FILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALI 76
+L F Y P+++LV SFN + + VW GFS RWY L ++ + A ++ +AL
Sbjct: 12 LVLGFAFLYGPILLLVAASFNASQLVTVWGGFSTRWYARLAENGPLV-AATLTTLKVALA 70
Query: 77 SSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGI 135
S+ ++T++GT A+AL + F G+ + V P+V+P++IIG+SLL++F L G+
Sbjct: 71 SASLATVLGTLAALALDRRGGFPGRALFSGLLVAPMVMPEVIIGLSLLLLFVALGIDRGL 130
Query: 136 ITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISA 195
+TI AH TF + +V +V +RL D +++EAA DLGA+ V +P++LPA+ +
Sbjct: 131 LTIVAAHATFTLCFVAVVVQARLRGLDRTLLEAAADLGASPATVFRTVTLPLILPAVAAG 190
Query: 196 FLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTL 253
FL+A TLS DD VI FVSGPG++TLP+R+YS +RLGV+P +NA+S +LI L L
Sbjct: 191 FLLAFTLSMDDLVIASFVSGPGATTLPMRLYSQVRLGVTPEINAISTLLIATVALGVL 248
>gi|46143845|ref|ZP_00133976.2| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
Length = 246
Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 96/234 (41%), Positives = 161/234 (68%), Gaps = 2/234 (0%)
Query: 24 FFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVST 82
+ Y+P+I+LV+ SFN+ + G+ W GFS WY+ LF ++ + +A S+ IA ++ ST
Sbjct: 7 YLYIPIIILVVNSFNEDRYGLQWKGFSWNWYERLFA-NDTLVQATMNSLTIAFFAATFST 65
Query: 83 IIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAH 142
++G +IAL + F+GK+ + + + ++ PDI++ VSLL++F L +LG I++ IAH
Sbjct: 66 VLGALTSIALYRYKFRGKQMVGGLLFIVMMSPDIVMAVSLLVLFMILGVQLGFISLLIAH 125
Query: 143 TTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTL 202
TF +PYV+ + SRL +FD ++EAA DLGA+ L K+I+P+ LP+IIS +L++ T+
Sbjct: 126 ITFCLPYVVITISSRLSDFDGKMLEAAKDLGASEVTILRKIILPLALPSIISGWLLSFTI 185
Query: 203 SFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTK 256
S DD V++ FV+ P LPL+I+S+++ GV+P VNAL+ I+I+ S+ L + ++
Sbjct: 186 SLDDVVVSSFVTSPSYEVLPLKIFSLVKTGVTPEVNALATIMIIFSLTLVVLSQ 239
>gi|157083378|gb|ABV13056.1| hypothetical protein CKO_01929 [Citrobacter koseri ATCC BAA-895]
Length = 259
Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 160/232 (68%), Gaps = 2/232 (0%)
Query: 34 IYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIAL 92
+ SFN + G+ W GF+ WY L +++++ +A +S+ +A+ S+ +TIIG+ A+AL
Sbjct: 27 VNSFNSSRFGINWQGFTTNWY-SLLMNNDSLLQAAQHSLTMAVFSATFATIIGSLTAVAL 85
Query: 93 KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVLF 152
+ F+GK ++ M + ++ PDI++ +SLL++F L +LG ++ +H TF +P+V+
Sbjct: 86 YRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVV 145
Query: 153 IVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFF 212
V SRL FD ++EAA DLGA+ L K+I+P+ +PA+ + +L++ TLS DD V++ F
Sbjct: 146 TVYSRLKGFDVRMLEAAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTLSMDDVVVSSF 205
Query: 213 VSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNFIK 264
V+GPG LPL+IYSM+++GVSP VNAL+ IL+V+S+++ ++++ + ++ K
Sbjct: 206 VTGPGYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTK 257
>gi|82702109|ref|YP_411675.1| Binding-protein-dependent transport systems inner membrane
component [Nitrosospira multiformis ATCC 25196]
gi|82410174|gb|ABB74283.1| Binding-protein-dependent transport systems inner membrane
component [Nitrosospira multiformis ATCC 25196]
Length = 267
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 103/245 (42%), Positives = 162/245 (66%), Gaps = 6/245 (2%)
Query: 19 ILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALIS 77
+L F Y+PLI++V+YSFND + W GF+L WYK LF ++ + A S+ IAL +
Sbjct: 13 VLVYAFLYIPLIIVVLYSFNDSRLNAEWVGFTLFWYKALFNNTEMLLAA-RNSLIIALCA 71
Query: 78 SLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMF-ATLKFKLGII 136
S +T++GT +A+ + + L + P+ +P+I++GVS+L+ F L F LG++
Sbjct: 72 SFSATLLGTMSGLAIHRYKLR---VLPVLVFTPVAMPEILLGVSILLFFLQVLNFTLGMV 128
Query: 137 TIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAF 196
+I IAHTTF I +V IV +RL D SI EAA DLGA+ QT V +P+++PA+++
Sbjct: 129 SIIIAHTTFCIGFVAIIVRARLQGMDESIFEAARDLGASPWQTFRLVTLPLIMPAVVAGA 188
Query: 197 LMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTK 256
LM+ TLS DDFVITFF G G LP++IY+MI++ V+P VNA+S +L+++++++ +
Sbjct: 189 LMSFTLSIDDFVITFFTKGVGEPILPIQIYTMIKVAVTPEVNAISTLLMLLTLVMIIIAA 248
Query: 257 KLQKN 261
+L+ N
Sbjct: 249 RLESN 253
>gi|148358724|ref|YP_001249931.1| spermidine/putrescine ABC transporter permease protein PotC
[Legionella pneumophila str. Corby]
gi|148280497|gb|ABQ54585.1| spermidine/putrescine ABC transporter permease protein PotC
[Legionella pneumophila str. Corby]
Length = 255
Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats.
Identities = 106/252 (42%), Positives = 168/252 (66%), Gaps = 2/252 (0%)
Query: 13 TSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSI 71
T + L F Y+P+ +LV+YS ND K + W+GFSLRWYKELF H +W A + SI
Sbjct: 5 TQRLFLSLVYAFLYIPIAILVLYSVNDAKFSLQWHGFSLRWYKELF-HDRGLWSAVFNSI 63
Query: 72 FIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF 131
+ L SSL++T +G +I L F + ++ L + +L +++PDI++GV+LLI F +
Sbjct: 64 TLGLTSSLIATTMGLLASINLFLFRTRHRQILYTLLLLLIIIPDIVLGVALLIFFNITQV 123
Query: 132 KLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPA 191
LG +++ +AH TF+IP+V+ + SR++ + +I A DLGA+ LT+V++P+L PA
Sbjct: 124 PLGFLSLLVAHITFSIPFVILTINSRINTLNPNIYFGALDLGASRYFALTRVLLPLLWPA 183
Query: 192 IISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILL 251
++SAFL++ TLSFDD +I++FV+GP + LPL IYS++R GV+P +NAL I +S++L
Sbjct: 184 VLSAFLLSFTLSFDDVIISYFVAGPDFTILPLTIYSLVRAGVTPELNALCSITFGLSMIL 243
Query: 252 TLSTKKLQKNFI 263
+ + +L I
Sbjct: 244 VIISHRLSGKLI 255
>gi|75911251|ref|YP_325547.1| Binding-protein-dependent transport systems inner membrane
component [Anabaena variabilis ATCC 29413]
gi|75704976|gb|ABA24652.1| Binding-protein-dependent transport systems inner membrane
component [Anabaena variabilis ATCC 29413]
Length = 264
Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats.
Identities = 99/245 (40%), Positives = 144/245 (58%), Gaps = 2/245 (0%)
Query: 16 IIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIA 74
+ +L IF YLP++VL YSFN W GF+L WY +L + I A S+ +A
Sbjct: 15 VFSVLLFIFMYLPILVLGFYSFNKSPYSATWQGFTLDWYYQLLG-DDRILSALKNSLLVA 73
Query: 75 LISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLG 134
+ +S ++GT A+ L + F GK + ++ LPL++PDI I V+ L+ AT L
Sbjct: 74 CSAVGISAVLGTLMAVGLARYQFPGKNLYRGIAYLPLIIPDIAIAVATLVFLATFAIPLS 133
Query: 135 IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIIS 194
+ TI AH F I Y+ +V SRL D + EAA DLGAT Q +V++P L+P I++
Sbjct: 134 LWTIVAAHVVFCIAYIALVVSSRLTNLDPHLEEAALDLGATPIQAFLQVLLPQLMPGIVA 193
Query: 195 AFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLS 254
L+A LS DDF+I F SG G +TLP+ I+S IR GV P +NALSV+LI +S ++
Sbjct: 194 GCLLAFVLSLDDFLIASFTSGSGYNTLPMEIFSRIRSGVKPDINALSVLLIFLSAIVAFI 253
Query: 255 TKKLQ 259
+ ++
Sbjct: 254 AESIR 258
>gi|110677578|ref|YP_680585.1| putrescine ABC transporter, permease protein [Roseobacter
denitrificans OCh 114]
gi|109453694|gb|ABG29899.1| putrescine ABC transporter, permease protein [Roseobacter
denitrificans OCh 114]
Length = 272
Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats.
Identities = 102/230 (44%), Positives = 154/230 (66%), Gaps = 3/230 (1%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F YLP+++L+I+SFN+ K + VW GFS +WY EL ++ + A + +I +A++SS
Sbjct: 14 LGFAFLYLPMLILIIFSFNESKLVTVWAGFSTKWYGELLQNEAFL-DAAWVTIKVAVLSS 72
Query: 79 LVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
++TI+GT A L + F G+ M PLV+P++I G+SLL++F + G++T
Sbjct: 73 TLATILGTMAAYVLVRGGRFLGRTLFSGMIYAPLVMPEVITGLSLLLLFIGIGLDRGVLT 132
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
I +AHTTF++ +V +V SRL FD S+ EAA DLG + V +P++ PA+IS +L
Sbjct: 133 IVLAHTTFSMCFVSVVVSSRLLTFDRSLEEAALDLGCSPFDAFRLVTLPIIAPAVISGWL 192
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
+A TLS DD VI F +GP ++TLP++I+S +RLGVSP +NALS I+I I
Sbjct: 193 LAFTLSLDDLVIASFTAGPSATTLPIKIFSAVRLGVSPEINALSTIMIAI 242
>gi|83311721|ref|YP_421985.1| ABC-type spermidine/putrescine transport system [Magnetospirillum
magneticum AMB-1]
gi|82946562|dbj|BAE51426.1| ABC-type spermidine/putrescine transport system [Magnetospirillum
magneticum AMB-1]
Length = 268
Score = 164 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 103/247 (41%), Positives = 153/247 (61%), Gaps = 9/247 (3%)
Query: 9 NRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAF 67
NR + L F YLP+ +LVIYSFN K + VW GFS +WY EL H + A
Sbjct: 3 NRGFALYTALALVYAFLYLPIALLVIYSFNASKLVTVWGGFSTKWYGELL-HDAQVLDAA 61
Query: 68 YYSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMF 126
+ S+ IA +++ ++T +GT A+ L F F G+ M PLV+P+II G++LL++F
Sbjct: 62 WLSLKIAFLNACLATALGTMAAVVLVRFRRFSGRALFTGMVSAPLVMPEIITGLALLLLF 121
Query: 127 ATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTL 180
++ LG + TI IAH TF++ +V +V SRL + D S+ EAA DLGA
Sbjct: 122 VGMENLLGWPDGRSMTTIVIAHVTFSLSFVTVVVRSRLAQMDLSLEEAAMDLGARPLTVF 181
Query: 181 TKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL 240
+ +P++ PA+ + +L+A TLS DD VI+ FVSGPG++ LP+ I+S +RLGVSP +NAL
Sbjct: 182 FSITLPIIAPALAAGWLLAFTLSVDDVVISAFVSGPGATPLPIVIFSKVRLGVSPEINAL 241
Query: 241 SVILIVI 247
+ I++ +
Sbjct: 242 ATIVVAL 248
>gi|54294082|ref|YP_126497.1| hypothetical protein lpl1146 [Legionella pneumophila str. Lens]
gi|53753914|emb|CAH15385.1| hypothetical protein [Legionella pneumophila str. Lens]
Length = 255
Score = 164 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 105/252 (41%), Positives = 168/252 (66%), Gaps = 2/252 (0%)
Query: 13 TSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSI 71
T + L F Y+P+ +LV+YS ND K + W+GFSLRWYKELF H +W A + SI
Sbjct: 5 TQRLFLSLVYAFLYIPIAILVLYSVNDAKFSLQWHGFSLRWYKELF-HDRGLWSAVFNSI 63
Query: 72 FIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF 131
+ L SSL++T +G +I L F + ++ L + +L +++PDI++GV+LLI F +
Sbjct: 64 TLGLTSSLIATTMGLLASINLFLFRTRHRQILYTLLLLLIIIPDIVLGVALLIFFNITQV 123
Query: 132 KLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPA 191
LG +++ +AH TF+IP+V+ + SR++ + ++ A DLGA+ LT+V++P+L PA
Sbjct: 124 PLGFLSLLVAHITFSIPFVILTINSRINTLNPNVYFGALDLGASRYFALTRVLLPLLWPA 183
Query: 192 IISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILL 251
++SAFL++ TLSFDD +I++FV+GP + LPL IYS++R GV+P +NAL I +S++L
Sbjct: 184 VLSAFLLSFTLSFDDVIISYFVAGPDFTILPLTIYSLVRAGVTPELNALCSITFGLSMIL 243
Query: 252 TLSTKKLQKNFI 263
+ + +L I
Sbjct: 244 VIISHRLSGKLI 255
>gi|114331323|ref|YP_747545.1| binding-protein-dependent transport systems inner membrane
component [Nitrosomonas eutropha C91]
gi|114308337|gb|ABI59580.1| binding-protein-dependent transport systems inner membrane
component [Nitrosomonas eutropha C91]
Length = 261
Score = 164 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 103/247 (41%), Positives = 162/247 (65%), Gaps = 6/247 (2%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L IF Y+PL+++V+YSFND + W GF+L WY +LF + + A S+ IA+ +S
Sbjct: 14 LVYIFLYIPLVIVVVYSFNDSRLNAEWVGFTLDWYYKLFNNQEMLLAA-RNSLIIAVSAS 72
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMF-ATLKFKLGIIT 137
L++TI+GT +A+ + K L ++ P+ +P+I++GVSLL+ F L LG+++
Sbjct: 73 LLATILGTMAGLAIHRYRIK---VLPFLAFAPIAMPEILLGVSLLLFFLQVLNLTLGLVS 129
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
I IAHTTF + +V IV +RL D SI EAA DLGAT QT + +P+++PA+I+ L
Sbjct: 130 IIIAHTTFCVGFVAIIVRARLQGMDDSIFEAARDLGATPWQTFRLITLPLIMPAVIAGAL 189
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKK 257
M+ TLS DDFVITFF G G LP++IY+MI++ V+P VNA+S + ++++++L + +
Sbjct: 190 MSFTLSIDDFVITFFTKGIGEPILPIQIYTMIKIAVTPEVNAISTLFMLLTLVLIIIANR 249
Query: 258 LQKNFIK 264
L ++
Sbjct: 250 LDSGILQ 256
>gi|152969684|ref|YP_001334793.1| spermidine/putrescine ABC transporter membrane component
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|150954533|gb|ABR76563.1| spermidine/putrescine ABC transporter membrane component
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
Length = 261
Score = 164 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 89/229 (38%), Positives = 160/229 (69%), Gaps = 2/229 (0%)
Query: 34 IYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIAL 92
+ SFN + G+ W GF+ WY L +++++ +A +S+ +A++S+ +T+IG+ A+AL
Sbjct: 27 VNSFNRSRFGINWQGFTTDWY-SLLMNNDSLLQAAQHSLTMAVLSATFATLIGSLTAVAL 85
Query: 93 KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVLF 152
+ F+GK ++ M + ++ PDI++ +SLL++F + +LG ++ +H TF +P+V+
Sbjct: 86 YRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLIGVQLGFWSLLFSHITFCLPFVVV 145
Query: 153 IVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFF 212
V SRL FD ++EAA DLGA+ L K+I+P+ LPA+ + +L++ TLS DD V++ F
Sbjct: 146 TVYSRLKGFDVRMLEAAKDLGASEMTILRKIILPLALPAVAAGWLLSFTLSMDDVVVSSF 205
Query: 213 VSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKN 261
V+GPG LPL+IYSM+++GVSP VNAL+ IL+V+S+++ ++++ + ++
Sbjct: 206 VTGPGYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIARD 254
>gi|146338312|ref|YP_001203360.1| putrescine transport protein (ABC superfamily, membrane)
[Bradyrhizobium sp. ORS278]
gi|146191118|emb|CAL75123.1| putrescine transport protein (ABC superfamily, membrane)
[Bradyrhizobium sp. ORS278]
Length = 270
Score = 164 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 101/243 (41%), Positives = 156/243 (64%), Gaps = 7/243 (2%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L + F YLP+++LVIYSFN + + VW G+SLRWY E F I A + S+ + S+
Sbjct: 17 LGLAFLYLPILILVIYSFNASRLVTVWGGWSLRWYHEFFNDRAMI-DAAWMSLGVGATSA 75
Query: 79 LVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
++T++GT A+AL + F+G+ M PLV+P++I G+SLL++F L + G T
Sbjct: 76 TLATVLGTLAAVALSRGQAFRGRILFSGMLYAPLVMPEVITGLSLLLLFVALSAERGFWT 135
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
+ IAHTT + +V +V SRL D S+ EAA DLG + V +P++ PA+++ ++
Sbjct: 136 VTIAHTTLTMCFVAVVVQSRLVSLDRSLEEAAMDLGCDPFRAFVMVTLPLIAPAVVAGWM 195
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI----VISILLTL 253
+A TLS DD VI F +GPGS+TLP+RIYS +RLGV P +NA+ ++I V+ ++ +L
Sbjct: 196 LAFTLSLDDLVIASFTTGPGSATLPIRIYSEVRLGVKPEINAICTLVIGLIAVVIVVASL 255
Query: 254 STK 256
++K
Sbjct: 256 ASK 258
>gi|149204431|ref|ZP_01881398.1| putrescine ABC transporter, permease protein [Roseovarius sp.
TM1035]
gi|149142316|gb|EDM30363.1| putrescine ABC transporter, permease protein [Roseovarius sp.
TM1035]
Length = 271
Score = 164 bits (414), Expect = 7e-39, Method: Composition-based stats.
Identities = 105/243 (43%), Positives = 158/243 (65%), Gaps = 3/243 (1%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L F YLP+I+L+ YSFN+ K + VW GFS +WY EL + + + A + ++ +A+ SS
Sbjct: 14 LGFAFLYLPMIILITYSFNESKLVTVWAGFSTKWYGELLSNQSFL-DAAWVTVKVAVASS 72
Query: 79 LVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
++TI+GT A+ L + F G+ M PLV+P++I G+SLL++F + GI T
Sbjct: 73 TIATILGTMAALVLVRAGRFYGRTLFSGMIYAPLVMPEVITGLSLLLLFIGIGLDRGIFT 132
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
I +AHTTF++ +V +V SRL FD S+ EAA DLG ++ V +P++ PA+IS +L
Sbjct: 133 IILAHTTFSMCFVSVVVSSRLVTFDRSLEEAALDLGCSHFDAFRLVTLPIIAPAVISGWL 192
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKK 257
+A TLS DD VI F +GP ++TLP++I+S +RLGVSP +NALS I+I I + +S
Sbjct: 193 LAFTLSLDDLVIASFTAGPSATTLPIKIWSAVRLGVSPEINALSTIMIGIVAVGVISASL 252
Query: 258 LQK 260
+ K
Sbjct: 253 ITK 255
>gi|85716107|ref|ZP_01047083.1| Binding-protein-dependent transport systems inner membrane
component [Nitrobacter sp. Nb-311A]
gi|85697106|gb|EAQ34988.1| Binding-protein-dependent transport systems inner membrane
component [Nitrobacter sp. Nb-311A]
Length = 273
Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats.
Identities = 100/243 (41%), Positives = 156/243 (64%), Gaps = 7/243 (2%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L + F YLP+++LVIYSFN + + VW G+S+RWY E F + + A S+ +A +S+
Sbjct: 20 LGLAFLYLPIVILVIYSFNASRLVTVWGGWSVRWYVEFF-NDGAMLSALAMSLRVAAVSA 78
Query: 79 LVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIIT 137
+T+ GT A+AL + F G+ M PLV+P++I G+SLL++F + + G T
Sbjct: 79 TAATVFGTLAAVALTRAGAFHGRTLFSGMLYAPLVMPEVITGLSLLLLFVAVDAQRGFWT 138
Query: 138 IFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFL 197
+ IAHTT + +V +V SRL D S+ EAA DLG + KV +P++LP++++ ++
Sbjct: 139 VTIAHTTLTMCFVAVVVQSRLGSLDRSLEEAAMDLGCDPFRAFVKVTLPLILPSVVAGWM 198
Query: 198 MALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI----VISILLTL 253
+A TLS DD VI F +GPGS+TLP+RIYS +RLGV P +NA+ +++ VI + +L
Sbjct: 199 LAFTLSMDDVVIASFTTGPGSTTLPIRIYSEVRLGVKPEINAICTLIVGSIAVIIVAASL 258
Query: 254 STK 256
++K
Sbjct: 259 ASK 261
>gi|54297096|ref|YP_123465.1| hypothetical protein lpp1141 [Legionella pneumophila str. Paris]
gi|53750881|emb|CAH12292.1| hypothetical protein [Legionella pneumophila str. Paris]
Length = 255
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 105/252 (41%), Positives = 168/252 (66%), Gaps = 2/252 (0%)
Query: 13 TSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSI 71
T + L F Y+P+ +LV+YS ND K + W+GFSLRWYKELF H +W A + S+
Sbjct: 5 TQRLFLSLVYAFLYIPIAILVLYSVNDAKFSLQWHGFSLRWYKELF-HDRGLWSAVFNSM 63
Query: 72 FIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF 131
+ L SSL++T +G +I L F + ++ L + +L +++PDI++GV+LLI F +
Sbjct: 64 TLGLTSSLIATTMGLLASINLFLFRTRHRQILYTLLLLLIIIPDIVLGVALLIFFNITQV 123
Query: 132 KLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPA 191
LG +++ +AH TF+IP+V+ + SR++ + +I A DLGA+ LT+V++P+L PA
Sbjct: 124 PLGFLSLLVAHITFSIPFVILTINSRINTLNPNIYFGALDLGASRYFALTRVLLPLLWPA 183
Query: 192 IISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILL 251
++SAFL++ TLSFDD +I++FV+GP + LPL IYS++R GV+P +NAL I +S++L
Sbjct: 184 VLSAFLLSFTLSFDDVIISYFVAGPDFTILPLTIYSLVRAGVTPELNALCSITFGLSMIL 243
Query: 252 TLSTKKLQKNFI 263
+ + +L I
Sbjct: 244 VIISHRLSGKLI 255
>gi|66048085|ref|YP_237926.1| Binding-protein-dependent transport systems inner membrane
component [Pseudomonas syringae pv. syringae B728a]
gi|63258792|gb|AAY39888.1| Binding-protein-dependent transport systems inner membrane
component [Pseudomonas syringae pv. syringae B728a]
Length = 293
Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats.
Identities = 103/266 (38%), Positives = 166/266 (62%), Gaps = 13/266 (4%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+NR + S ++ +L ++F Y P+++LVIYSFN + + VW G+S++WY L +S + +
Sbjct: 1 MNRFRFSNLMLVLGLLFIYAPMVILVIYSFNASQLVTVWGGWSVKWYVGLLDNSQ-LMGS 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
S+ IA +++ + +GT A L FKG+ + + PLV+P++I G+SLL++
Sbjct: 60 VMRSLEIACYTAVAAVALGTMAAFVLTRISRFKGRTFFGGLVTAPLVMPEVITGLSLLLL 119
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F + +G I+TI+IAHTTF YV +V +RL E D SI EAA DLGA +
Sbjct: 120 FVAMAQMIGWPQERGIMTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGARPWKV 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
+ IPM+ P++ + +M+ LS DD V+ FVSGPGS+TLP+ ++S +RLGV P +NA
Sbjct: 180 FLLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINA 239
Query: 240 L-SVILIVISI---LLTLSTKKLQKN 261
+ S+IL+ +S+ L+ T++ + N
Sbjct: 240 VASLILLAVSLATFLVWFFTRRAENN 265
>gi|116494512|ref|YP_806246.1| spermidine/putrescine ABC transporter permease protein
[Lactobacillus casei ATCC 334]
gi|116104662|gb|ABJ69804.1| spermidine/putrescine ABC transporter permease protein
[Lactobacillus casei ATCC 334]
Length = 279
Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats.
Identities = 103/254 (40%), Positives = 159/254 (62%), Gaps = 9/254 (3%)
Query: 12 KTSFIIFILAMIFFYLPLIVLVIYSFNDGKGMV-WNGFSLRWYKELFKHSNNIWKAFYYS 70
K S + I I Y+P+ LVIYSF+ G M ++GF+ + Y ELF + I + +
Sbjct: 6 KWSNLYLIFVFICLYVPIFYLVIYSFSTGDRMSNYSGFTWKHYAELFADTRMI-QIVLDT 64
Query: 71 IFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKN----MSVLPLVVPDIIIGVSLLIMF 126
+ +AL+SSL++TIIG GA+A+ D + +KN ++ + +V PD+IIG S LI +
Sbjct: 65 LLVALLSSLIATIIGALGALAI---DRTSRPVVKNTVLSLNNILMVSPDVIIGASFLIFY 121
Query: 127 ATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIP 186
LK LG ++ ++H F+IP V+ ++L RL E +S+++AA DLGA+N Q LT+VI+P
Sbjct: 122 TALKVPLGFWSVLMSHIAFSIPIVVLMILPRLQEMSHSLLDAARDLGASNYQVLTRVIVP 181
Query: 187 MLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIV 246
+ P I S F MA T S DDF +TFFV+G G TL + IY+ R G+S +NALS ++ +
Sbjct: 182 YITPGIFSGFFMAFTYSLDDFAVTFFVTGNGFETLAVEIYARARQGISLEINALSGVMFI 241
Query: 247 ISILLTLSTKKLQK 260
++LL + +Q+
Sbjct: 242 FALLLVVGYYFIQQ 255
>gi|88861150|ref|ZP_01135784.1| Binding-protein-dependent transport systems inner membrane
component [Pseudoalteromonas tunicata D2]
gi|88816872|gb|EAR26693.1| Binding-protein-dependent transport systems inner membrane
component [Pseudoalteromonas tunicata D2]
Length = 272
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 103/242 (42%), Positives = 155/242 (64%), Gaps = 9/242 (3%)
Query: 14 SFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIF 72
S I+ ++ F Y P+ L+IYSFN+ + + VW GFS +WY EL + + A + S+
Sbjct: 8 SIIVLLIGFGFLYAPIFSLIIYSFNESRLVTVWAGFSTKWYVEL-AQNEPLLSAAWLSVK 66
Query: 73 IALISSLVSTIIGTFGAIALKWF-DFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKF 131
IA ++ ++ ++GT AIAL F + K L+ M+ PLV+P+IIIG+S+L++F +K
Sbjct: 67 IAFFNAWIAVMLGTLAAIALVRFPKSRSNKTLEVMTTAPLVMPEIIIGLSMLLLFVAMKD 126
Query: 132 KLGI------ITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVII 185
G +TI +AH+TF++ YV IV SRL D S EAA DLGA + + +
Sbjct: 127 MFGWPESRGQLTIILAHSTFSMAYVTVIVRSRLKNMDRSFEEAALDLGARPLKVFFTITL 186
Query: 186 PMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
P++ PA+ + +L+A TLS DD V+ FVSGPG++TLP+ +YS +RLGVSP +NAL+ I+I
Sbjct: 187 PLIAPALAAGWLLAFTLSMDDLVVANFVSGPGATTLPMMVYSSVRLGVSPQINALATIII 246
Query: 246 VI 247
I
Sbjct: 247 SI 248
>gi|119511369|ref|ZP_01630482.1| Binding-protein-dependent transport systems inner membrane
component [Nodularia spumigena CCY9414]
gi|119463991|gb|EAW44915.1| Binding-protein-dependent transport systems inner membrane
component [Nodularia spumigena CCY9414]
Length = 241
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 100/229 (43%), Positives = 137/229 (59%), Gaps = 2/229 (0%)
Query: 26 YLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTII 84
YLP++VL YSFN W GF+L WY +LF I A S+ +A + +S ++
Sbjct: 2 YLPILVLGFYSFNQSPYSATWQGFTLDWYYKLFS-DERILSALKNSLIVAFCAVGISAVL 60
Query: 85 GTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTT 144
GT A+ L + F GK + +S LPL++PDI I V+ L+ A L + TI AH
Sbjct: 61 GTLMAVGLARYQFLGKNLYRGISYLPLIIPDIAIAVATLVFLAAFAIPLSLWTIIAAHIV 120
Query: 145 FNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSF 204
F + Y+ +V SRL D ++ EAA DLGAT Q +V++P L PAII+ L+A LS
Sbjct: 121 FCLAYIGVVVSSRLTNLDPNLEEAALDLGATPIQAFIQVLLPQLTPAIIAGCLLAFVLSL 180
Query: 205 DDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTL 253
DDF+I F SG GS+TLP+ I+S IR GV P VNALS+ILI +S ++
Sbjct: 181 DDFLIASFTSGSGSNTLPIEIFSRIRTGVQPDVNALSIILITVSAIVAF 229
>gi|126207770|ref|YP_001052995.1| spermidine/putrescine transport system permease protein PotC
[Actinobacillus pleuropneumoniae L20]
gi|126096562|gb|ABN73390.1| spermidine/putrescine transport system permease protein PotC
[Actinobacillus pleuropneumoniae L20]
Length = 246
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 95/234 (40%), Positives = 160/234 (68%), Gaps = 2/234 (0%)
Query: 24 FFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVST 82
+ Y+P+I+LV+ SFN+ + G+ W GFS WY+ LF ++ + +A S+ IA ++ ST
Sbjct: 7 YLYIPIIILVVNSFNEDRYGLQWKGFSWNWYERLFA-NDTLVQATMNSLTIAFFAATFST 65
Query: 83 IIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAH 142
++G +IAL + F+G + + + + ++ PDI++ VSLL++F L +LG I++ IAH
Sbjct: 66 VLGALTSIALYRYKFRGMQMVGGLLFIVMMSPDIVMAVSLLVLFMILGVRLGFISLLIAH 125
Query: 143 TTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTL 202
TF +PYV+ + SRL +FD ++EAA DLGA+ L K+I+P+ LP+IIS +L++ T+
Sbjct: 126 ITFCLPYVVITISSRLSDFDGKMLEAAKDLGASEVTILRKIILPLALPSIISGWLLSFTI 185
Query: 203 SFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTK 256
S DD V++ FV+ P LPL+I+S+++ GV+P VNAL+ I+I+ S+ L + ++
Sbjct: 186 SLDDVVVSSFVTSPSYEVLPLKIFSLVKTGVTPEVNALATIMIIFSLTLVVLSQ 239
>gi|149377231|ref|ZP_01894979.1| binding-protein-dependent transport systems inner membrane
component [Marinobacter algicola DG893]
gi|149358530|gb|EDM47004.1| binding-protein-dependent transport systems inner membrane
component [Marinobacter algicola DG893]
Length = 272
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 98/234 (41%), Positives = 150/234 (64%), Gaps = 9/234 (3%)
Query: 28 PLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGT 86
P++VL++YSFN + + VW GFS WY ELF+ I A + S+ IA S+ ++ +GT
Sbjct: 24 PMVVLIVYSFNASRLVSVWAGFSTHWYGELFR-DQQILSAVWMSLKIAFYSASMAVCLGT 82
Query: 87 FGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLG------IITIF 139
A + F +G+ L +M PLV+P++I G+SLL++F + +G + TI+
Sbjct: 83 LCAFVMTRFKRLRGRTLLSSMISAPLVMPEVITGLSLLLLFVQMAQTIGWPADRGMATIW 142
Query: 140 IAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMA 199
IAHTTF YV +V +RL E D ++ EAA DLG T +T + +P++ PA++S +L+A
Sbjct: 143 IAHTTFCSAYVAVVVSARLREVDRTVEEAAMDLGCTPLKTFFVITLPVIAPALVSGWLLA 202
Query: 200 LTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTL 253
TLS DD VI FVSGPG++TLP+ ++S +RLGVSP +NAL+ ++I+ L+
Sbjct: 203 FTLSLDDLVIASFVSGPGATTLPMVVFSSVRLGVSPKINALATLIILTVSLIAF 256
>gi|115526076|ref|YP_782987.1| binding-protein-dependent transport systems inner membrane
component [Rhodopseudomonas palustris BisA53]
gi|115520023|gb|ABJ08007.1| binding-protein-dependent transport systems inner membrane
component [Rhodopseudomonas palustris BisA53]
Length = 272
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 106/255 (41%), Positives = 157/255 (61%), Gaps = 5/255 (1%)
Query: 4 MSNNLNRRKTSFIIFILAM--IFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHS 60
M+ NR + F I LA+ F YLP+++LVIYSFN + + VW G+S RWY ELF +
Sbjct: 1 MAERANRGLSRFNIAALALGVAFLYLPIVILVIYSFNASRLVTVWGGWSTRWYAELF-ND 59
Query: 61 NNIWKAFYYSIFIALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIG 119
+ +A S +A +S+ +T++GT AIAL + FKG+ M PLV+P++I G
Sbjct: 60 QAMLEAAGISFRVAAVSATAATVLGTLAAIALSRGARFKGRTLFSGMLYAPLVMPEVITG 119
Query: 120 VSLLIMFATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
+SLL++F L + G T+ IAHTT + +V +V +RL D S+ EAA DLG +
Sbjct: 120 LSLLLLFVALNAERGFWTVTIAHTTLTMCFVAVVVQARLGALDRSLEEAAMDLGCNPVRA 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
+P++ P++ + +++A LS DD VI F +GPGS+TLP+RIYS IRLGV P VNA
Sbjct: 180 FLSATLPLIAPSVAAGWMLAFALSLDDLVIASFTTGPGSATLPIRIYSEIRLGVKPEVNA 239
Query: 240 LSVILIVISILLTLS 254
+ ++I LL ++
Sbjct: 240 ICTLIIAAVTLLIVT 254
>gi|71735980|ref|YP_276982.1| putrescine ABC transporter, permease protein [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|71556533|gb|AAZ35744.1| putrescine ABC transporter, permease protein [Pseudomonas syringae
pv. phaseolicola 1448A]
Length = 293
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 100/251 (39%), Positives = 159/251 (63%), Gaps = 10/251 (3%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+NR + S ++ +L ++F Y P+++LVIYSFN + + VW G+S++WY L +S + +
Sbjct: 1 MNRFRFSNLMLVLGLLFIYAPMVILVIYSFNASQLVTVWGGWSVKWYVGLLDNSQ-LMGS 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
S+ IA +++ + +GT A L FKG+ + + PLV+P++I G+SLL++
Sbjct: 60 VMRSLEIACYTAVAAVALGTMAAFVLTRISRFKGRTFFGGLVTAPLVMPEVITGLSLLLL 119
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F + +G I+TI+IAHTTF YV +V +RL E D SI EAA DLGA +
Sbjct: 120 FVAMAQLIGWPQERGIMTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGARPWKV 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
+ IPM+ P++ + +M+ LS DD V+ FVSGPGS+TLP+ ++S +RLGV P +NA
Sbjct: 180 FLLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINA 239
Query: 240 L-SVILIVISI 249
+ S+IL+ +S+
Sbjct: 240 VASLILLAVSL 250
>gi|83941877|ref|ZP_00954339.1| putrescine ABC transporter, permease protein [Sulfitobacter sp.
EE-36]
gi|83847697|gb|EAP85572.1| putrescine ABC transporter, permease protein [Sulfitobacter sp.
EE-36]
Length = 273
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 110/255 (43%), Positives = 160/255 (62%), Gaps = 5/255 (1%)
Query: 10 RRKTSFII--FILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
RR + F I L F YLP+I+LVIYSFN K + VW GFS +WY EL ++ + A
Sbjct: 2 RRASWFNITSLTLGFAFLYLPMILLVIYSFNSSKLVTVWAGFSTKWYGELLQNEAFL-NA 60
Query: 67 FYYSIFIALISSLVSTIIGTFGA-IALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
++ +A+ SS ++T++GT A I ++ F G+ M PLV+P++I G+SLL++
Sbjct: 61 AMVTLKVAVASSTLATVLGTMAAYILVRGGRFAGRTLFSGMIYAPLVMPEVITGLSLLLL 120
Query: 126 FATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVII 185
F + G +TI +AHTTF++ YV +V SRL FD S+ EAA DLG + V +
Sbjct: 121 FIGIGLDRGTLTIVLAHTTFSMCYVSVVVSSRLVTFDRSLEEAALDLGCSPFDAFRLVTL 180
Query: 186 PMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
P++ PA+IS +L+A TLS DD VI F +GP S+TLP++I+S +RLGVSP +NALS I+I
Sbjct: 181 PIIAPAVISGWLLAFTLSLDDLVIASFTTGPSSTTLPIKIWSAVRLGVSPEINALSTIMI 240
Query: 246 VISILLTLSTKKLQK 260
I ++ + K
Sbjct: 241 GIVTFGVITASLMSK 255
>gi|24112527|ref|NP_707037.1| spermidine/putrescine ABC transporter membrane component [Shigella
flexneri 2a str. 301]
gi|32699533|sp|Q83RR7|POTC_SHIFL Spermidine/putrescine transport system permease protein potC
gi|24051419|gb|AAN42744.1| spermidine/putrescine transport system permease [Shigella flexneri
2a str. 301]
Length = 264
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 88/232 (37%), Positives = 160/232 (68%), Gaps = 2/232 (0%)
Query: 34 IYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIAL 92
+ SFN + G+ W GF+ +WY L +++++ +A +S+ +A+ S+ +T+IG+ A+AL
Sbjct: 27 VNSFNSSRFGINWQGFTTKWY-SLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVAL 85
Query: 93 KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVLF 152
+ F+GK ++ M + ++ PDI++ +SLL++F L +LG ++ +H TF +P+V+
Sbjct: 86 YRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVV 145
Query: 153 IVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFF 212
V SRL FD ++EAA DLGA+ L K+I+P+ +PA+ + ++++ TLS DD V++ F
Sbjct: 146 TVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSF 205
Query: 213 VSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNFIK 264
V+GP LPL+IYSM+++GVSP VNAL+ IL+V+S+++ ++++ + ++ K
Sbjct: 206 VTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTK 257
>gi|77461622|ref|YP_351129.1| Binding-protein-dependent transport systems inner membrane
component [Pseudomonas fluorescens PfO-1]
gi|77385625|gb|ABA77138.1| Binding-protein-dependent transport systems inner membrane
component [Pseudomonas fluorescens PfO-1]
Length = 296
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 102/255 (40%), Positives = 161/255 (63%), Gaps = 10/255 (3%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ R + S ++ +L ++F YLP+++LVIYSFN K + VW G+S++WY L +S + +
Sbjct: 1 MKRFRFSSLMLVLGLLFIYLPMLILVIYSFNASKLVTVWGGWSVKWYVGLLDNSQ-LMGS 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
S+ IA +++ + +GT A L + FKG+ + PLV+P++I G+SLL++
Sbjct: 60 VVRSLEIACYTAIAAVALGTLAAFVLTRITRFKGRTLFGGLVTAPLVMPEVITGLSLLLL 119
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F + +G I+TI+IAHTTF YV +V +RL E D SI EAA DLGA +
Sbjct: 120 FVAMAQMIGWPQERGIVTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGARPWKV 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
+ IPM+ P++ + +M+ LS DD V+ FVSGPGS+TLP+ ++S +RLGV P +NA
Sbjct: 180 FFLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINA 239
Query: 240 L-SVILIVISILLTL 253
+ S+IL+ +S++ L
Sbjct: 240 VASLILLAVSLVTFL 254
>gi|152997523|ref|YP_001342358.1| Ornithine carbamoyltransferase [Marinomonas sp. MWYL1]
gi|150838447|gb|ABR72423.1| Ornithine carbamoyltransferase [Marinomonas sp. MWYL1]
Length = 272
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 106/234 (45%), Positives = 153/234 (65%), Gaps = 9/234 (3%)
Query: 21 AMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSL 79
+F Y P+I L++YSFN+ K + VW G+SL+WY ELF++ I A + S+ IALIS+
Sbjct: 16 GFVFLYAPIIALIVYSFNESKLVTVWGGWSLKWYVELFRNEQ-IMSAAWVSLKIALISAT 74
Query: 80 VSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLG---- 134
+++++GT L + F GK L PLV+P++I G+SLL++F +L+ G
Sbjct: 75 MASVLGTLAGFVLSRMRKFAGKAMLTGWVTAPLVMPEVITGLSLLLLFVSLESMFGWPAG 134
Query: 135 --IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAI 192
+ TI IAHTTF + YV +V SRL D ++ EAA DLGA + +P++ PAI
Sbjct: 135 RGVTTIVIAHTTFCLAYVAVVVQSRLASLDETLEEAAMDLGAKPTSLFFLITLPLIAPAI 194
Query: 193 ISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIV 246
IS +L++ TLS DD VI FVSGPG+STLP+ I+S +RLGV+P VNAL+ ++IV
Sbjct: 195 ISGWLLSFTLSLDDLVIASFVSGPGNSTLPMVIFSKVRLGVTPEVNALATLMIV 248
>gi|75255638|ref|ZP_00727417.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Escherichia coli E22]
Length = 264
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 88/232 (37%), Positives = 160/232 (68%), Gaps = 2/232 (0%)
Query: 34 IYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIAL 92
+ SFN + G+ W GF+ +WY L +++++ +A +S+ +A+ S+ +T+IG+ A+AL
Sbjct: 27 VNSFNSSRFGINWQGFTTKWY-SLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVAL 85
Query: 93 KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVLF 152
+ F+GK ++ M + ++ PDI++ +SLL++F L +LG ++ +H TF +P+V+
Sbjct: 86 YRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVV 145
Query: 153 IVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFF 212
V SRL FD ++EAA DLGA+ L K+I+P+ +PA+ + ++++ TLS DD V++ F
Sbjct: 146 TVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSF 205
Query: 213 VSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNFIK 264
V+GP LPL+IYSM+++GVSP VNAL+ IL+V+S+++ ++++ + ++ K
Sbjct: 206 VTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTK 257
>gi|82544410|ref|YP_408357.1| spermidine/putrescine transport system permease [Shigella boydii
Sb227]
gi|81245821|gb|ABB66529.1| spermidine/putrescine transport system permease [Shigella boydii
Sb227]
Length = 264
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 88/232 (37%), Positives = 160/232 (68%), Gaps = 2/232 (0%)
Query: 34 IYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIAL 92
+ SFN + G+ W GF+ +WY L +++++ +A +S+ +A+ S+ +T+IG+ A+AL
Sbjct: 27 VNSFNSSRFGINWQGFTTKWY-SLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVAL 85
Query: 93 KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVLF 152
+ F+GK ++ M + ++ PDI++ +SLL++F L +LG ++ +H TF +P+V+
Sbjct: 86 YRYRFRGKPFVSGMLFVVMISPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVV 145
Query: 153 IVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFF 212
V SRL FD ++EAA DLGA+ L K+I+P+ +PA+ + ++++ TLS DD V++ F
Sbjct: 146 TVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSF 205
Query: 213 VSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNFIK 264
V+GP LPL+IYSM+++GVSP VNAL+ IL+V+S+++ ++++ + ++ K
Sbjct: 206 VTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTK 257
>gi|89095003|ref|ZP_01167932.1| putrescine ABC transporter, permease protein [Oceanospirillum sp.
MED92]
gi|89080711|gb|EAR59954.1| putrescine ABC transporter, permease protein [Oceanospirillum sp.
MED92]
Length = 271
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 112/248 (45%), Positives = 154/248 (62%), Gaps = 11/248 (4%)
Query: 10 RRKTSFIIFI--LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+RK+ F+ F +F Y P+I L+IYSFN K + VW G+SL+WY ELF+ ++ I A
Sbjct: 2 QRKSLFLRFSAGFGFLFLYAPIIALIIYSFNKSKLVTVWGGWSLKWYSELFQ-NDQIIDA 60
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
S+ IA IS+ V+ ++GT L F F+GK PLV+P++I G+SLL++
Sbjct: 61 ALLSLKIAFISATVAVVLGTMAGYVLSRFGPFRGKMIFSGWITAPLVMPEVITGLSLLLL 120
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F L+ G TI IAH TF + YV IV +RL D ++ EAA DLGA
Sbjct: 121 FVALEGMFGWPSGRGTGTIIIAHVTFCMAYVAVIVQARLSSMDETLEEAAMDLGAKPSSL 180
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
V +P++ PAIIS +L++ TLS DD VI FVSGPG+STLP+ I+S +RLGV+P VNA
Sbjct: 181 FFLVTLPLIAPAIISGWLLSFTLSLDDLVIASFVSGPGNSTLPMVIFSKVRLGVTPEVNA 240
Query: 240 LSVILIVI 247
L+ I+I I
Sbjct: 241 LATIMIAI 248
>gi|90021011|ref|YP_526838.1| TonB-dependent receptor [Saccharophagus degradans 2-40]
gi|89950611|gb|ABD80626.1| binding-protein-dependent transport systems inner membrane
component [Saccharophagus degradans 2-40]
Length = 270
Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 98/245 (40%), Positives = 156/245 (63%), Gaps = 9/245 (3%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ R II IL +F Y P++ L++YSFN K + VW+GFS +WY L + ++ + +A
Sbjct: 1 MRRMPVLLIILILGYVFLYGPILSLIVYSFNASKLVTVWSGFSTKWYAALLQ-NDALLEA 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
S+ IA + + +S ++GT AI L ++ +G + L + P+V+P++IIG+SLL++
Sbjct: 60 AGLSVKIAAVVASLSVLLGTLAAIVLVRYKKSRGTRNLAMLVTAPMVMPEVIIGLSLLLL 119
Query: 126 FATLKFKLGI------ITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F ++ +G +TI +AHTTF + YV IV SRL D S+ E A DLGA
Sbjct: 120 FIAMEDLIGWPKGRGQLTIILAHTTFAMAYVTLIVQSRLAHMDPSLEEVAEDLGARPATV 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
+ +P++ PA+++ +L+A TLS DD V+ FVSGPG++TLP+ +YS +RLGVSP +NA
Sbjct: 180 FFAITLPLIAPALLAGWLLAFTLSLDDLVVANFVSGPGATTLPMVVYSSVRLGVSPEINA 239
Query: 240 LSVIL 244
L+ ++
Sbjct: 240 LATLI 244
>gi|118068023|ref|ZP_01536277.1| binding-protein-dependent transport systems inner membrane
component [Serratia proteamaculans 568]
gi|118017709|gb|EAV31627.1| binding-protein-dependent transport systems inner membrane
component [Serratia proteamaculans 568]
Length = 281
Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 102/243 (41%), Positives = 154/243 (63%), Gaps = 10/243 (4%)
Query: 17 IFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIAL 75
I ++ F Y P+++LVIYSFN K + VW G+S RWY ELF H + + A S+ IA
Sbjct: 15 ILVVGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYTELF-HDSAMISAVGLSLTIAA 73
Query: 76 ISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLG 134
S+ + ++G A+ + F F+G M PLV+PD+I G+SLL++F + G
Sbjct: 74 ASATAAVVLGAIAAVVMVRFGRFRGSTGFAFMLTAPLVMPDVITGLSLLLLFVAMGHAFG 133
Query: 135 ------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPML 188
+ TI++AH TF YV ++ SRL E D SI EAA DLGAT + + +PM+
Sbjct: 134 WPSERGMFTIWLAHVTFCTAYVSVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLPMI 193
Query: 189 LPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL-SVILIVI 247
PA+I+ +++A TLS DD VI FV+GPG++TLP+ ++S +R+GV+P +NAL S+IL+V+
Sbjct: 194 APALIAGWMLAFTLSLDDLVIASFVAGPGATTLPMLVFSSVRMGVNPEINALASLILLVV 253
Query: 248 SIL 250
++
Sbjct: 254 GVI 256
>gi|82777265|ref|YP_403614.1| spermidine/putrescine transport system permease [Shigella
dysenteriae Sd197]
gi|81241413|gb|ABB62123.1| spermidine/putrescine transport system permease [Shigella
dysenteriae Sd197]
Length = 264
Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 88/232 (37%), Positives = 160/232 (68%), Gaps = 2/232 (0%)
Query: 34 IYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIAL 92
+ SFN + G+ W GF+ +WY L +++++ +A +S+ +A+ S+ +T+IG+ A+AL
Sbjct: 27 VNSFNSSRFGINWQGFTTKWYG-LLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVAL 85
Query: 93 KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVLF 152
+ F+GK ++ M + ++ PDI++ +SLL++F L +LG ++ +H TF +P+V+
Sbjct: 86 YRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVV 145
Query: 153 IVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFF 212
V SRL FD ++EAA DLGA+ L K+I+P+ +PA+ + ++++ TLS DD V++ F
Sbjct: 146 TVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSF 205
Query: 213 VSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNFIK 264
V+GP LPL+IYSM+++GVSP VNAL+ IL+V+S+++ ++++ + ++ K
Sbjct: 206 VTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTK 257
>gi|83855354|ref|ZP_00948884.1| putrescine ABC transporter, permease protein [Sulfitobacter sp.
NAS-14.1]
gi|83843197|gb|EAP82364.1| putrescine ABC transporter, permease protein [Sulfitobacter sp.
NAS-14.1]
Length = 273
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 110/255 (43%), Positives = 160/255 (62%), Gaps = 5/255 (1%)
Query: 10 RRKTSFII--FILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
RR + F I L F YLP+I+LVIYSFN K + VW GFS +WY EL ++ + A
Sbjct: 2 RRASWFNITSLTLGFAFLYLPMILLVIYSFNSSKLVTVWAGFSTKWYGELLQNEAFL-NA 60
Query: 67 FYYSIFIALISSLVSTIIGTFGA-IALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
++ +A+ SS ++T++GT A I ++ F G+ M PLV+P++I G+SLL++
Sbjct: 61 AMVTLKVAVASSTLATVLGTMAAYILVRGGRFAGRTLFSGMIYAPLVMPEVITGLSLLLL 120
Query: 126 FATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVII 185
F + G +TI +AHTTF++ YV +V SRL FD S+ EAA DLG + V +
Sbjct: 121 FIGIGLDRGTLTIVLAHTTFSMCYVSVVVSSRLVTFDRSLEEAALDLGCSPFDAFRLVTL 180
Query: 186 PMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
P++ PA+IS +L+A TLS DD VI F +GP S+TLP++I+S +RLGVSP +NALS I+I
Sbjct: 181 PIIAPAVISGWLLAFTLSLDDLVIASFTTGPSSTTLPIKIWSAVRLGVSPEINALSTIMI 240
Query: 246 VISILLTLSTKKLQK 260
I ++ + K
Sbjct: 241 GIVTFGVITASLISK 255
>gi|15801239|ref|NP_287256.1| spermidine/putrescine ABC transporter membrane component
[Escherichia coli O157:H7 EDL933]
gi|15830754|ref|NP_309527.1| spermidine/putrescine ABC transporter membrane component
[Escherichia coli O157:H7 str. Sakai]
gi|16129087|ref|NP_415642.1| polyamine transporter subunit [Escherichia coli K12]
gi|26247268|ref|NP_753308.1| spermidine/putrescine ABC transporter membrane component
[Escherichia coli CFT073]
gi|30062655|ref|NP_836826.1| spermidine/putrescine ABC transporter membrane component [Shigella
flexneri 2a str. 2457T]
gi|74311683|ref|YP_310102.1| spermidine/putrescine transport system permease [Shigella sonnei
Ss046]
gi|75175754|ref|ZP_00695954.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Shigella boydii BS512]
gi|75190180|ref|ZP_00703447.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Escherichia coli E24377A]
gi|75195305|ref|ZP_00705375.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Escherichia coli HS]
gi|75208950|ref|ZP_00709220.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Escherichia coli B171]
gi|75228206|ref|ZP_00714865.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Escherichia coli B7A]
gi|75234232|ref|ZP_00718625.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Escherichia coli E110019]
gi|75239622|ref|ZP_00723589.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Escherichia coli F11]
gi|75511387|ref|ZP_00734070.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Escherichia coli 53638]
gi|83569555|ref|ZP_00921007.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Shigella dysenteriae 1012]
gi|83584891|ref|ZP_00923549.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Escherichia coli 101-1]
gi|89107970|ref|AP_001750.1| polyamine transporter subunit [Escherichia coli W3110]
gi|91210279|ref|YP_540265.1| spermidine/putrescine transport system permease [Escherichia coli
UTI89]
gi|110641300|ref|YP_669030.1| spermidine/putrescine transport system permease protein PotC
[Escherichia coli 536]
gi|110805136|ref|YP_688656.1| spermidine/putrescine transport system permease [Shigella flexneri
5 str. 8401]
gi|117623309|ref|YP_852222.1| spermidine/putrescine transport system permease [Escherichia coli
APEC O1]
gi|124529869|ref|ZP_01700713.1| binding-protein-dependent transport systems inner membrane
component [Escherichia coli B]
gi|84029441|sp|P0AFK8|POTC_ECO57 Spermidine/putrescine transport system permease protein potC
gi|84029442|sp|P0AFK7|POTC_ECOL6 Spermidine/putrescine transport system permease protein potC
gi|84029443|sp|P0AFK6|POTC_ECOLI Spermidine/putrescine transport system permease protein potC
gi|12514675|gb|AAG55868.1|AE005322_2 spermidine/putrescine transport system permease [Escherichia coli
O157:H7 EDL933]
gi|26107669|gb|AAN79868.1|AE016759_142 Spermidine/putrescine transport system permease protein potC
[Escherichia coli CFT073]
gi|147328|gb|AAC37040.1| transport protein
gi|1651551|dbj|BAA35944.1| polyamine transporter subunit [Escherichia coli W3110]
gi|1787368|gb|AAC74208.1| polyamine transporter subunit [Escherichia coli K12]
gi|13360964|dbj|BAB34923.1| spermidine/putrescine transport system permease [Escherichia coli
O157:H7 str. Sakai]
gi|30040903|gb|AAP16633.1| spermidine/putrescine transport system permease [Shigella flexneri
2a str. 2457T]
gi|73855160|gb|AAZ87867.1| spermidine/putrescine transport system permease [Shigella sonnei
Ss046]
gi|91071853|gb|ABE06734.1| spermidine/putrescine transport system permease [Escherichia coli
UTI89]
gi|110342892|gb|ABG69129.1| spermidine/putrescine transport system permease protein PotC
[Escherichia coli 536]
gi|110614684|gb|ABF03351.1| spermidine/putrescine transport system permease [Shigella flexneri
5 str. 8401]
gi|115512433|gb|ABJ00508.1| spermidine/putrescine transport system permease [Escherichia coli
APEC O1]
gi|124499577|gb|EAY47063.1| binding-protein-dependent transport systems inner membrane
component [Escherichia coli B]
gi|157066328|gb|ABV05583.1| spermidine/putrescine ABC transporter, permease protein PotC
[Escherichia coli HS]
gi|157080905|gb|ABV20613.1| spermidine/putrescine ABC transporter, permease protein PotC
[Escherichia coli E24377A]
Length = 264
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 88/232 (37%), Positives = 160/232 (68%), Gaps = 2/232 (0%)
Query: 34 IYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIAL 92
+ SFN + G+ W GF+ +WY L +++++ +A +S+ +A+ S+ +T+IG+ A+AL
Sbjct: 27 VNSFNSSRFGINWQGFTTKWY-SLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVAL 85
Query: 93 KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVLF 152
+ F+GK ++ M + ++ PDI++ +SLL++F L +LG ++ +H TF +P+V+
Sbjct: 86 YRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVV 145
Query: 153 IVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFF 212
V SRL FD ++EAA DLGA+ L K+I+P+ +PA+ + ++++ TLS DD V++ F
Sbjct: 146 TVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSF 205
Query: 213 VSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNFIK 264
V+GP LPL+IYSM+++GVSP VNAL+ IL+V+S+++ ++++ + ++ K
Sbjct: 206 VTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTK 257
>gi|77459366|ref|YP_348873.1| Binding-protein-dependent transport systems inner membrane
component [Pseudomonas fluorescens PfO-1]
gi|77383369|gb|ABA74882.1| Binding-protein-dependent transport systems inner membrane
component [Pseudomonas fluorescens PfO-1]
Length = 262
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 96/252 (38%), Positives = 163/252 (64%), Gaps = 3/252 (1%)
Query: 3 IMSNNLNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSN 61
++S +L + + I +L + + Y+P++VL+ YSFN + VW FS WY + + +
Sbjct: 1 MISLHLKKLPATREISLLILAYLYVPILVLIAYSFNANRSATVWTEFSFAWYGRILANPS 60
Query: 62 NIWKAFYYSIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVS 121
I A SI +A I+++ +T I A+A + F G+K ++ LPL++P+I+ V+
Sbjct: 61 -IQTAALNSIIVATIATVCATTIALLAALA-TYRPFYGQKMVEGGINLPLILPEIVTAVA 118
Query: 122 LLIMFATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLT 181
L++F L KLG++T+ +AH F IP+ + +RL++ D S++EAA DL A Q
Sbjct: 119 TLLLFMALGIKLGLMTVIVAHIGFCIPFAYLPIRARLNDLDKSLLEAANDLYANPWQVFR 178
Query: 182 KVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALS 241
+V +P+L PA++S ++A +S DDF++TFFV+GPGS+TLP+ I+S I+ GV+P +NA+S
Sbjct: 179 RVTLPLLWPAVLSGSVLAFVVSLDDFIMTFFVAGPGSTTLPVYIFSAIKAGVTPEINAIS 238
Query: 242 VILIVISILLTL 253
+++VISI+L +
Sbjct: 239 TLMLVISIVLVV 250
>gi|146311293|ref|YP_001176367.1| binding-protein-dependent transport systems inner membrane
component [Enterobacter sp. 638]
gi|145318169|gb|ABP60316.1| binding-protein-dependent transport systems inner membrane
component [Enterobacter sp. 638]
Length = 268
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 89/229 (38%), Positives = 161/229 (70%), Gaps = 2/229 (0%)
Query: 34 IYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIAL 92
+ SFN + G+ W GF+ +WY L +++++ +A +S+ +A++S+ +T+IG+ A+AL
Sbjct: 27 VNSFNSSRFGINWQGFTTKWY-SLLMNNDSLLQAAQHSLTMAIVSATFATLIGSLTAVAL 85
Query: 93 KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVLF 152
+ F+GK ++ M + ++ PDI++ +SLL++F L +LG ++ +H TF +P+V+
Sbjct: 86 YRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGVQLGFWSLLFSHITFCLPFVVV 145
Query: 153 IVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFF 212
V SRL FD ++EAA DLGA+ L K+I+P+ +PA+ + +L++ TLS DD V++ F
Sbjct: 146 TVYSRLKGFDVRMLEAAKDLGASELTILRKIILPLAMPAVAAGWLLSFTLSMDDVVVSSF 205
Query: 213 VSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKN 261
V+GPG LPL+IYSM+++GVSP VNAL+ IL+++S++L ++++ + ++
Sbjct: 206 VTGPGYEILPLKIYSMVKVGVSPEVNALATILLLLSLVLVIASQLIARD 254
>gi|134302339|ref|YP_001122308.1| ABC transporter, permease protein [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134050116|gb|ABO47187.1| ABC transporter, permease protein [Francisella tularensis subsp.
tularensis WY96-3418]
Length = 268
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 104/250 (41%), Positives = 161/250 (64%), Gaps = 9/250 (3%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ R S I+ IL +IF Y+PLI+LV++SF++ + + +W GF+ WY E+ H +I A
Sbjct: 1 MKRFSFSKIMLILGLIFLYIPLIILVVFSFSNSEIINLWGGFTFDWYHEVI-HDEDIINA 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWFDF-KGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
+ S+ IA I+S ++TI+GT A A+ F F + + +L + PLV+PDII+GV+LL+M
Sbjct: 60 TFTSLKIATITSAIATILGTIIAYAMTRFKFFRSRSFLYGLVATPLVLPDIILGVALLLM 119
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F+TL+ +G T+ IAH T YV ++ SR+ D S+ EAA DLGA +T
Sbjct: 120 FSTLQHLIGWSHERGTTTVVIAHVTMCTAYVTIVMQSRIASVDISLEEAALDLGAGPIET 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
K+ +P L+PA+I++ L+ TLS DD V+T FV+G + TLP+ IYS ++ G +P +NA
Sbjct: 180 FFKITLPQLIPALITSALLTFTLSIDDLVVTEFVAGSDNPTLPMYIYSTVKNGPTPEINA 239
Query: 240 LSVILIVISI 249
L+ I+I I +
Sbjct: 240 LATIMIGIIV 249
>gi|146280468|ref|YP_001170621.1| putrescine ABC transporter, permease protein [Pseudomonas stutzeri
A1501]
gi|145568673|gb|ABP77779.1| putrescine ABC transporter, permease protein [Pseudomonas stutzeri
A1501]
Length = 300
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 103/269 (38%), Positives = 167/269 (62%), Gaps = 13/269 (4%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ R S +I +L ++F YLP+++LVIYSFN + + VW G+SL+WY L +S + A
Sbjct: 1 MKRWSFSNLILVLGLLFIYLPMVILVIYSFNASRLVTVWGGWSLKWYTGLLDNSQ-LMGA 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
S+ +A +++ + +GT A L F+G+ + PLV+P++I G+SLL++
Sbjct: 60 VMRSLEVAAYTAVAAVALGTMAAFVLTRIPVFRGRTLFGGLVTAPLVMPEVITGLSLLLL 119
Query: 126 FATLK------FKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F + + G++TI+IAHTTF YV +V++RL E D SI EAA DLGA +
Sbjct: 120 FVAMAQLVGWPAQRGLVTIWIAHTTFCSAYVAVVVMARLRELDLSIEEAAMDLGARPWKV 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
+ +PM+ P++ + +++ LS DD V+ FVSGPGS+TLP+ I+S +RLGV P +NA
Sbjct: 180 FFLITMPMIAPSLAAGGMLSFALSLDDLVLASFVSGPGSTTLPMEIFSAVRLGVKPEINA 239
Query: 240 L-SVILIVISILLTLS---TKKLQKNFIK 264
+ S+IL+ +S+ L+ T++ +K I+
Sbjct: 240 VASLILLSVSLATFLAWYLTRRAEKRRIR 268
>gi|118592891|ref|ZP_01550279.1| Spermidine/putrescine transport system permease protein potC
[Stappia aggregata IAM 12614]
gi|118434425|gb|EAV41078.1| Spermidine/putrescine transport system permease protein potC
[Stappia aggregata IAM 12614]
Length = 276
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 89/247 (36%), Positives = 156/247 (63%), Gaps = 15/247 (6%)
Query: 20 LAMIFFYLPLIVLVIYSFNDG--KGMVWNGFSLRWYKELF-------------KHSNNIW 64
L ++F Y+P++++ ++SFN M+W GF+ WY+ +F + ++ ++
Sbjct: 18 LFLVFIYVPILLITVFSFNSNPVNMMIWQGFTFDWYRTIFGFPTELNELTLYVESTDQLY 77
Query: 65 KAFYYSIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLI 124
A S+ +ALI++ VST++GT A+A+ F F+ K + + + +P+++PDII+G++LLI
Sbjct: 78 NAVLNSLTVALITTAVSTVLGTSVALAVARFRFRLKNFYRALMFMPMIMPDIILGIALLI 137
Query: 125 MFATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVI 184
F + F LG+ TI I H TF YV +V +R+ + D S+ EA+ DLGA T +V
Sbjct: 138 FFVSFGFGLGLHTIIIGHCTFLSSYVFIVVSARISDMDDSLEEASADLGADGWTTFKRVT 197
Query: 185 IPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVIL 244
+P++ P +I ++A +S DD VIT+F+SG S+TLP+ IY M+R G+ P +NA++ ++
Sbjct: 198 LPLIAPGVIGGAMLAFIISMDDLVITYFISGVDSTTLPVHIYGMLRRGIKPEINAIATVM 257
Query: 245 IVISILL 251
+V S ++
Sbjct: 258 LVFSFII 264
>gi|151571875|gb|EDN37529.1| hypothetical protein FTDG_00318 [Francisella tularensis subsp.
novicida GA99-3548]
Length = 268
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 105/254 (41%), Positives = 163/254 (64%), Gaps = 9/254 (3%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ R S I+ IL +IF Y+PLI+LV++SF++ + + +W GF+ WY E+ H +I A
Sbjct: 1 MKRFSFSKIMLILGLIFLYIPLIILVVFSFSNSEIINLWGGFTFDWYHEVI-HDEDIINA 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWFDF-KGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
+ S+ IA I+S ++TI+GT A A+ F F + + +L + PLV+PDII+GV+LL+M
Sbjct: 60 TFTSLKIATITSAIATILGTIIAYAMTRFKFFRSRGFLYGLVATPLVLPDIILGVALLLM 119
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F+TL+ +G T+ IAH T YV ++ SR+ D S+ EAA DLGA +T
Sbjct: 120 FSTLQHLIGWPHERGTTTVVIAHVTMCTAYVTIVMQSRIASVDISLEEAALDLGAGPIET 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
K+ +P L+PA+I++ L+ TLS DD V+T FV+G + TLP+ IYS ++ G +P +NA
Sbjct: 180 FFKITLPQLIPALITSALLTFTLSIDDLVVTEFVAGSDNPTLPMYIYSTVKNGPTPEINA 239
Query: 240 LSVILIVISILLTL 253
L+ I+I I ++ L
Sbjct: 240 LATIMIGIIVVGVL 253
>gi|118037598|ref|ZP_01509004.1| binding-protein-dependent transport systems inner membrane
component [Burkholderia phytofirmans PsJN]
gi|117992407|gb|EAV06699.1| binding-protein-dependent transport systems inner membrane
component [Burkholderia phytofirmans PsJN]
Length = 303
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 96/237 (40%), Positives = 150/237 (63%), Gaps = 9/237 (3%)
Query: 17 IFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIAL 75
+ +F Y+P+I L++YSFN+ K + VW+GFSL+WY L + + A + S+ I L
Sbjct: 12 VLTFGFLFLYIPIISLIVYSFNESKLVTVWSGFSLKWYGALLQ-DGELLNAAWLSLKIGL 70
Query: 76 ISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLG 134
+++ S +IGT+ L F F+G M PLV+P++I G+SLL++F L+ LG
Sbjct: 71 LTACASVVIGTWAGFVLARFGRFRGFTLFAGMINAPLVIPEVIQGISLLLLFVALEQMLG 130
Query: 135 ------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPML 188
+ TI+I H + YV IV SR+ E + S+ EAA DLGAT + + +P++
Sbjct: 131 WPKGRGLFTIWIGHVMLCVSYVAIIVQSRVKELNRSLEEAALDLGATPFKVFFLITLPLI 190
Query: 189 LPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
A++S +L++ TLSFDD V++ F+SGPGS+TLPL ++S +RLG++P +NAL+ I I
Sbjct: 191 SQALMSGWLLSFTLSFDDLVLSAFLSGPGSTTLPLVVFSRVRLGLNPEMNALATIFI 247
>gi|30249824|ref|NP_841894.1| potC; putative spermidine/putrescine transport system permease
protein [Nitrosomonas europaea ATCC 19718]
gi|30180861|emb|CAD85783.1| potC; putative spermidine/putrescine transport system permease
protein [Nitrosomonas europaea ATCC 19718]
Length = 258
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 100/220 (45%), Positives = 146/220 (66%), Gaps = 6/220 (2%)
Query: 24 FFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVST 82
F Y+PLIV+V+YSFND + W GF+L WY +LF + + A S+ IA+ +SL++T
Sbjct: 18 FLYIPLIVVVVYSFNDSRLNAEWVGFTLDWYYKLFNNGEMLLAA-RNSLIIAITASLLAT 76
Query: 83 IIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMF-ATLKFKLGIITIFIA 141
++GT +A+ + K L ++ P+ +P+I++GVSLL+ F L LG+++I IA
Sbjct: 77 VLGTMAGLAIHRYRLK---VLPILAFTPIAMPEILLGVSLLLFFLQVLNLTLGMVSIIIA 133
Query: 142 HTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALT 201
HTTF I +V IV +RL D SI EAA DLGAT QT + +P+++PA+ + LM+ T
Sbjct: 134 HTTFCIGFVAIIVRARLQGMDDSIFEAARDLGATPWQTFRLITLPLIMPAVAAGALMSFT 193
Query: 202 LSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALS 241
LS DDFVITFF G G LP++IY+MI++ V+P VNA+S
Sbjct: 194 LSIDDFVITFFTKGVGEPILPIQIYTMIKISVTPEVNAIS 233
>gi|119483321|ref|ZP_01618735.1| polyamine transport protein PotC [Lyngbya sp. PCC 8106]
gi|119458088|gb|EAW39210.1| polyamine transport protein PotC [Lyngbya sp. PCC 8106]
Length = 288
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 103/246 (41%), Positives = 160/246 (65%), Gaps = 20/246 (8%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSN---------NIWKAFYY 69
LA+ F YLP+++LVIYSFN + +W GF+L WY+ LF + IW+A
Sbjct: 21 LALAFLYLPILILVIYSFNTSRFNAIWTGFTLDWYRSLFGQTTETTANFSTVKIWQALNN 80
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
S+ IA+IS+ ++TI+GT A+AL+ F F G + + + +LP+++P+I + +SLL+ F +
Sbjct: 81 SLIIAVISTGIATILGTTVALALERFRFPGDQIIAGLILLPIIIPEITLAISLLVFFTLI 140
Query: 130 ----------KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
+ LG+ ++ + H TFNI +V+ V +RL E D ++ EAA DLGA +T
Sbjct: 141 FRIIENLTGIRLTLGLPSVILGHITFNIAFVMITVRARLAELDPALEEAALDLGANEWRT 200
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
T++ P++LP I+S L+A TLS DDFVITFF +G G++TLPL +Y MI+L V+P +NA
Sbjct: 201 FTRITFPLILPGIVSGALLAFTLSLDDFVITFFNTGVGATTLPLFVYGMIKLSVTPAINA 260
Query: 240 LSVILI 245
LS +++
Sbjct: 261 LSTLML 266
>gi|28872413|ref|NP_795032.1| putrescine ABC transporter, permease protein [Pseudomonas syringae
pv. tomato str. DC3000]
gi|28855668|gb|AAO58727.1| putrescine ABC transporter, permease protein [Pseudomonas syringae
pv. tomato str. DC3000]
Length = 293
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 102/266 (38%), Positives = 165/266 (62%), Gaps = 13/266 (4%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+NR + S ++ + ++F Y P+++LVIYSFN + + VW G+S++WY L +S + +
Sbjct: 1 MNRFRFSNLMLVFGLLFIYAPMVILVIYSFNASQLVTVWGGWSVKWYVGLLDNSQ-LMGS 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
S+ IA +++ + +GT A L FKG+ + + PLV+P++I G+SLL++
Sbjct: 60 VMRSLEIACYTAIAAVALGTMAAFVLTRISRFKGRTFFGGLVTAPLVMPEVITGLSLLLL 119
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F + +G I+TI+IAHTTF YV +V +RL E D SI EAA DLGA +
Sbjct: 120 FVAMAQMIGWPQERGIMTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGARPWKV 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
+ IPM+ P++ + +M+ LS DD V+ FVSGPGS+TLP+ ++S +RLGV P +NA
Sbjct: 180 FFLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINA 239
Query: 240 L-SVILIVISI---LLTLSTKKLQKN 261
+ S+IL+ +S+ L+ T++ + N
Sbjct: 240 VASLILLAVSLATFLVWFFTRRAENN 265
>gi|45441086|ref|NP_992625.1| putrescine transport system permease protein [Yersinia pestis
biovar Microtus str. 91001]
gi|45435945|gb|AAS61502.1| putrescine transport system permease protein [Yersinia pestis
biovar Microtus str. 91001]
Length = 295
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 100/254 (39%), Positives = 154/254 (60%), Gaps = 23/254 (9%)
Query: 16 IIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIA 74
+I + F Y P+++LVIYSFN K + VW G+S RWY +LF S I A S+ IA
Sbjct: 14 VILTVGYTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYTQLFNDSAMI-SAVGLSLTIA 72
Query: 75 LISSLVSTIIGTFGA---------------IALKWFDFKGKKYLKNMSVLPLVVPDIIIG 119
S+ ++ ++GT A + +++ F+G M PLV+PD+I G
Sbjct: 73 AASATMAVVLGTIAAASATMAVVLGTIAAVVMVRFGRFRGSTGFAFMLTAPLVMPDVITG 132
Query: 120 VSLLIMFATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLG 173
+SLL++F + +G + TI++AH TF YV ++ SRL E D SI EAA DLG
Sbjct: 133 LSLLLLFVAMGHAIGWPAERGMFTIWLAHVTFCTAYVTVVISSRLRELDRSIEEAAMDLG 192
Query: 174 ATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGV 233
AT + + +PM+ PA+IS +L+A TLS DD VI FV+GPG++TLP+ ++S +R+GV
Sbjct: 193 ATPLKVFFVITVPMIAPALISGWLLAFTLSLDDLVIASFVAGPGATTLPMLVFSSVRMGV 252
Query: 234 SPVVNALSVILIVI 247
+P +NAL+ +++++
Sbjct: 253 NPEINALATLILLV 266
>gi|157122028|gb|EDO66168.1| polyamine transporter [Francisella tularensis subsp. holarctica
FSC022]
gi|157122577|gb|EDO66706.1| hypothetical protein FTAG_00925 [Francisella tularensis subsp.
holarctica FSC022]
Length = 268
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 105/254 (41%), Positives = 163/254 (64%), Gaps = 9/254 (3%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ R S I+ IL +IF Y+PLI+LV++SF++ + + +W GF+ WY E+ H +I A
Sbjct: 1 MKRFSFSKIMLILGLIFLYIPLIILVVFSFSNSEIINLWGGFTFDWYHEVI-HDEDIINA 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWFDF-KGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
+ S+ IA I+S ++TI+GT A A+ F F + + +L + PLV+PDII+GV+LL+M
Sbjct: 60 TFTSLKIATITSAIATILGTIIAYAMTRFKFFRSRSFLYGLVATPLVLPDIILGVALLLM 119
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F+TL+ +G T+ IAH T YV ++ SR+ D S+ EAA DLGA +T
Sbjct: 120 FSTLQHLIGWSHERGTTTVVIAHVTMCTAYVTIVMQSRIASVDISLEEAALDLGAGPIET 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
K+ +P L+PA+I++ L+ TLS DD V+T FV+G + TLP+ IYS ++ G +P +NA
Sbjct: 180 FFKITLPQLIPALITSALLTFTLSIDDLVVTEFVAGSDNPTLPMYIYSTVKNGPTPEINA 239
Query: 240 LSVILIVISILLTL 253
L+ I+I I ++ L
Sbjct: 240 LATIMIGIIVVGVL 253
>gi|17402693|gb|AAL38938.1|AF325833_3 PotC [Salmonella enterica]
Length = 259
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 163/232 (70%), Gaps = 2/232 (0%)
Query: 34 IYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIAL 92
+ SFN + G+ W GF+ +WY EL +++++ +A +S+ +A+ S+ +T+IG+ A+AL
Sbjct: 27 VNSFNSSRFGINWQGFTTKWY-ELLVNNDSLLQAAQHSLTMAIFSATFATMIGSLTAVAL 85
Query: 93 KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVLF 152
+ F+GK ++ M + ++ PDI++ +SLL++F L +LG+ ++ +H TF +P+V+
Sbjct: 86 YRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGLRSLLFSHITFCLPFVVV 145
Query: 153 IVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFF 212
V SRL FD ++EAA DLGA+ L K+I+P+ +PA+ + +L++ TLS DD V++ F
Sbjct: 146 TVYSRLKGFDVRMLEAAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTLSMDDVVVSSF 205
Query: 213 VSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNFIK 264
V+GPG LPL+IYSM+++GVSP VNAL+ +L+V+S+++ ++++ + ++ K
Sbjct: 206 VTGPGYEILPLKIYSMVKVGVSPEVNALATVLLVLSLVMVIASQLIARDKTK 257
>gi|15894125|ref|NP_347474.1| ABC-type spermidine/putrescine transport system, permease component
II [Clostridium acetobutylicum ATCC 824]
gi|15023730|gb|AAK78814.1|AE007599_10 ABC-type spermidine/putrescine transport system, permease component
II [Clostridium acetobutylicum ATCC 824]
Length = 260
Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats.
Identities = 104/240 (43%), Positives = 153/240 (63%), Gaps = 3/240 (1%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L IF Y P++ L+++SFN K W FSL WYK L + + I A YY++ +A++SS
Sbjct: 13 LTYIFLYAPIVFLMVFSFNSEKFSSHWGHFSLTWYKALLQ-DDRILTALYYTVLVAIVSS 71
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
++STI GT AI + KK L N++ +P++ PDI++ VSL+ +F LK G+ T+
Sbjct: 72 IISTIFGTISAIGISKMSPLPKKLLLNVNNIPVLNPDIVMAVSLMTLFIFLKIPFGLTTL 131
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
IAH F++PYV+ VL +L + IV+AA DLGAT + K+I+P + II+ FL
Sbjct: 132 IIAHIAFSVPYVILSVLPKLTQLPTDIVKAALDLGATPSYAMRKIILPQIKSGIIAGFLF 191
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIV-ISILLTLSTKK 257
A T+S DDFVI+FF +G + L + IYSM R G++P +NALS ++ V I ILL L+ +K
Sbjct: 192 AFTMSIDDFVISFFNTGNDVTNLSIEIYSMARRGITPEINALSTLMFVTILILLLLANRK 251
>gi|3341856|gb|AAC27497.1| PotC [Actinobacillus actinomycetemcomitans]
Length = 248
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 99/238 (41%), Positives = 163/238 (68%), Gaps = 2/238 (0%)
Query: 24 FFYLPLIVLVIYSFN-DGKGMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVST 82
+ Y+P+++LV SFN D G+ W GFS WY+ LF +++ + +A +S+ IA ++ ++T
Sbjct: 7 YLYIPIVILVTNSFNSDRYGLSWKGFSWNWYERLF-NNDTLIQAAIHSVTIAFFAATLAT 65
Query: 83 IIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAH 142
I+G AIAL + F+GK+ + M + ++ PDI++ VSLL +F + LG ++ +AH
Sbjct: 66 IVGGLTAIALYRYRFRGKQAVSGMLFIVMMSPDIVMAVSLLALFMVVGISLGFWSLLLAH 125
Query: 143 TTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTL 202
TF +PYV + SRL+ FD ++EAA DLGA+ L K+I+P+ LPA++S +L++ T+
Sbjct: 126 VTFCLPYVTVTIFSRLNGFDARMLEAAKDLGASEITILRKIILPLALPAVVSGWLLSFTI 185
Query: 203 SFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQK 260
S DD V++ FVSG LPLRI+S+++ GV+P VNAL+ I+IV+S+LL ++++ + K
Sbjct: 186 SLDDVVVSSFVSGVSYEILPLRIFSLVKTGVTPEVNALATIMIVLSLLLVIASQFIGK 243
>gi|118497332|ref|YP_898382.1| ATP-binding cassette putrescine uptake system, membrane protein,
subunit I [Francisella tularensis subsp. novicida U112]
gi|118423238|gb|ABK89628.1| ATP-binding cassette putrescine uptake system, membrane protein,
subunit I [Francisella tularensis subsp. novicida U112]
gi|151570424|gb|EDN36078.1| polyamine transporter [Francisella tularensis subsp. novicida
GA99-3549]
Length = 268
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 105/254 (41%), Positives = 163/254 (64%), Gaps = 9/254 (3%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ R S I+ IL +IF Y+PLI+LV++SF++ + + +W GF+ WY E+ H +I A
Sbjct: 1 MKRFSFSKIMLILGLIFLYIPLIILVVFSFSNSEIINLWGGFTFDWYHEVI-HDEDIINA 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWFDF-KGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
+ S+ IA I+S ++TI+GT A A+ F F + + +L + PLV+PDII+GV+LL+M
Sbjct: 60 TFTSLKIATITSAIATILGTIIAYAMTRFKFFRSRSFLYGLVATPLVLPDIILGVALLLM 119
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F+TL+ +G T+ IAH T YV ++ SR+ D S+ EAA DLGA +T
Sbjct: 120 FSTLQHLIGWPHERGTTTVVIAHVTMCTAYVTIVMQSRIASVDISLEEAALDLGAGPIET 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
K+ +P L+PA+I++ L+ TLS DD V+T FV+G + TLP+ IYS ++ G +P +NA
Sbjct: 180 FFKITLPQLIPALITSALLTFTLSIDDLVVTEFVAGSDNPTLPMYIYSTVKNGPTPEINA 239
Query: 240 LSVILIVISILLTL 253
L+ I+I I ++ L
Sbjct: 240 LATIMIGIIVVGVL 253
>gi|152985751|ref|YP_001345790.1| polyamine transport protein PotI [Pseudomonas aeruginosa PA7]
gi|150960909|gb|ABR82934.1| polyamine transport protein PotI [Pseudomonas aeruginosa PA7]
Length = 289
Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats.
Identities = 102/256 (39%), Positives = 159/256 (62%), Gaps = 10/256 (3%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ R S ++ I+ ++F YLP+++LVIYSFN K + VW G+S++WY L ++ + +
Sbjct: 1 MKRWNFSNVMLIVGLLFIYLPMLILVIYSFNASKLVTVWGGWSVKWYVGLLDNTQLV-SS 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
S+ IA ++ S I+GT A L F+G+ M PLV+P++I G+SLL++
Sbjct: 60 VGRSLEIAFYTAFSSVILGTLAAFVLTRIPRFRGRTLFGGMVTAPLVMPEVITGLSLLLL 119
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F + +G I+TI+IAHT+F YV +V +RL E D SI EAA DLGA +
Sbjct: 120 FVAMAQLIGWPQERGIVTIWIAHTSFCSSYVAVVVSARLRELDLSIEEAAMDLGAKPWKV 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
+ IPM+ P++ + +M+ LS DD V+ FVSGPGS+TLP+ ++S +RLGV P +NA
Sbjct: 180 FLLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINA 239
Query: 240 L-SVILIVISILLTLS 254
+ S+IL+ +S+ L+
Sbjct: 240 VASLILLSVSLFTFLA 255
>gi|17402709|gb|AAL38950.1|AF325837_3 PotC [Salmonella enterica]
Length = 259
Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 162/232 (69%), Gaps = 2/232 (0%)
Query: 34 IYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIAL 92
+ SFN + G+ W GF+ +WY EL +++++ +A +S+ +A+ S+ +TIIG+ A+AL
Sbjct: 27 VNSFNSSRFGINWQGFTTKWY-ELLVNNDSLLQAAQHSLTMAIFSATFATIIGSLTAVAL 85
Query: 93 KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVLF 152
+ F+GK ++ M + ++ PDI++ +SLL++F L +LG ++ +H TF +P+V+
Sbjct: 86 YRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVV 145
Query: 153 IVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFF 212
V SRL FD ++EAA DLGA+ L K+I+P+ +PA+ + +L++ TLS DD V++ F
Sbjct: 146 TVYSRLKGFDVRMLEAAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTLSMDDVVVSSF 205
Query: 213 VSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNFIK 264
V+GPG LPL+IYSM+++GVSP VNAL+ +L+V+S+++ ++++ + ++ K
Sbjct: 206 VTGPGYEILPLKIYSMVKVGVSPEVNALATVLLVLSLVMVIASQLIARDKTK 257
>gi|149187668|ref|ZP_01865965.1| putrescine transporter subunit: membrane component of ABC
superfamily [Vibrio shilonii AK1]
gi|148838548|gb|EDL55488.1| putrescine transporter subunit: membrane component of ABC
superfamily [Vibrio shilonii AK1]
Length = 280
Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats.
Identities = 101/243 (41%), Positives = 152/243 (62%), Gaps = 9/243 (3%)
Query: 12 KTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYS 70
K + I F YLP+++L++YSFN+ + + VW+GFS +WY EL + + + S
Sbjct: 10 KLKWCILAAGFTFLYLPILILIVYSFNENRLVTVWSGFSFKWYFELLE-DDLLMGGVKLS 68
Query: 71 IFIALISSLVSTIIGTFGAIALKWF-DFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
+ I +S+ + ++GT A L F FKG+ M PLV+P++I G+SLL++F +
Sbjct: 69 LMIGFLSASAAVVLGTIAAFVLNRFGKFKGETGFAFMITAPLVMPEVITGLSLLLLFIAM 128
Query: 130 K--FKL----GIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKV 183
F L G++TI+IAH TF YV +V SRL E D SI EAA DLGA + ++
Sbjct: 129 GQVFDLFSQRGMMTIWIAHVTFCTAYVTVVVSSRLQEVDRSIEEAAMDLGAPPWKVFLQI 188
Query: 184 IIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVI 243
+P + PAI++ +L+A TLS DD VI FVSGP ++TLP+ ++S +RLGVSP +NAL+ +
Sbjct: 189 TLPSIAPAILAGWLLAFTLSLDDLVIASFVSGPSATTLPMVVFSSVRLGVSPKINALATL 248
Query: 244 LIV 246
I+
Sbjct: 249 TIL 251
>gi|90425427|ref|YP_533797.1| binding-protein-dependent transport systems inner membrane
component [Rhodopseudomonas palustris BisB18]
gi|90107441|gb|ABD89478.1| binding-protein-dependent transport systems inner membrane
component [Rhodopseudomonas palustris BisB18]
Length = 266
Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats.
Identities = 106/255 (41%), Positives = 156/255 (61%), Gaps = 5/255 (1%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
L+R + + F LA F YLP+++LVIYSFN + + VW G+S RWY E F + + A
Sbjct: 3 LSRFNIAALAFGLA--FLYLPIVILVIYSFNASRLVTVWGGWSTRWYAEFF-NDQAMLAA 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
+ S +AL S+ +T+IGT A+AL + F+G+ M PLV+P++I G+SLL++
Sbjct: 60 AWMSFRVALASASAATLIGTLAAVALSRGGHFRGRTLFSGMLYAPLVMPEVITGLSLLLL 119
Query: 126 FATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVII 185
F L G T+ +AHTT + +V +V SRL D S+ EAA DLG + V +
Sbjct: 120 FVALDAGRGFWTVTLAHTTLTMCFVAVVVQSRLGALDRSLEEAAMDLGCPPLRAFVAVTL 179
Query: 186 PMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
P++ PAI + +++A TLS DD VI F +GPGS+TLP+RIYS +RLGV P +NA+ ++I
Sbjct: 180 PLITPAIAAGWMLAFTLSLDDLVIASFTTGPGSATLPIRIYSEVRLGVKPEINAICTLII 239
Query: 246 VISILLTLSTKKLQK 260
LL ++ K
Sbjct: 240 AAVTLLIIAASLASK 254
>gi|16760098|ref|NP_455715.1| spermidine/putrescine ABC transporter membrane component
[Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|16764578|ref|NP_460193.1| spermidine/putrescine ABC transporter membrane component
[Salmonella typhimurium LT2]
gi|29142131|ref|NP_805473.1| spermidine/putrescine ABC transporter membrane component
[Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|62179743|ref|YP_216160.1| spermidine/putrescine ABC transporter membrane component
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|25308725|pir||AH0645 spermidine/putrescine transport system permease protein PotC
STY1263 [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16419741|gb|AAL20152.1| spermidine/putrescine transporter [Salmonella typhimurium LT2]
gi|16502392|emb|CAD08347.1| spermidine/putrescine transport system permease protein PotC
[Salmonella enterica subsp. enterica serovar Typhi]
gi|29137760|gb|AAO69322.1| spermidine/putrescine transport system permease protein PotC
[Salmonella enterica subsp. enterica serovar Typhi Ty2]
gi|62127376|gb|AAX65079.1| ABC superfamily (membrane), spermidine/putrescine transporter
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
Length = 259
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 163/232 (70%), Gaps = 2/232 (0%)
Query: 34 IYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIAL 92
+ SFN + G+ W GF+ +WY EL +++++ +A +S+ +A+ S+ +T+IG+ A+AL
Sbjct: 27 VNSFNSSRFGINWQGFTTKWY-ELLVNNDSLLQAAQHSLTMAIFSATFATLIGSLTAVAL 85
Query: 93 KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVLF 152
+ F+GK ++ M + ++ PDI++ +SLL++F L +LG ++ +H TF++P+V+
Sbjct: 86 YRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFSLPFVVV 145
Query: 153 IVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFF 212
V SRL FD ++EAA DLGA+ L K+I+P+ +PA+ + +L++ TLS DD V++ F
Sbjct: 146 TVYSRLKGFDVRMLEAAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTLSMDDVVVSSF 205
Query: 213 VSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNFIK 264
V+GPG LPL+IYSM+++GVSP VNAL+ +L+V+S+++ ++++ + ++ K
Sbjct: 206 VTGPGYEILPLKIYSMVKVGVSPEVNALATVLLVLSLVMVIASQLIARDKTK 257
>gi|56707694|ref|YP_169590.1| polyamine transporter, subunit I, ABC transporter, membrane protein
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110670165|ref|YP_666722.1| polyamine transporter, subunit I, ABC transporter, membrane protein
[Francisella tularensis subsp. tularensis FSC198]
gi|56604186|emb|CAG45197.1| polyamine transporter, subunit I, ABC transporter, membrane protein
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110320498|emb|CAL08580.1| polyamine transporter, subunit I, ABC transporter, membrane protein
[Francisella tularensis subsp. tularensis FSC 198]
gi|151568445|gb|EDN34099.1| polyamine transporter [Francisella tularensis subsp. tularensis
FSC033]
Length = 268
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 105/254 (41%), Positives = 163/254 (64%), Gaps = 9/254 (3%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ R S I+ IL +IF Y+PLI+LV++SF++ + + +W GF+ WY E+ H +I A
Sbjct: 1 MKRFSFSKIMLILDLIFLYIPLIILVVFSFSNSEIINLWGGFTFDWYHEVI-HDEDIINA 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWFDF-KGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
+ S+ IA I+S ++TI+GT A A+ F F + + +L + PLV+PDII+GV+LL+M
Sbjct: 60 TFTSLKIATITSAIATILGTIIAYAMTRFKFFRSRSFLYGLVATPLVLPDIILGVALLLM 119
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F+TL+ +G T+ IAH T YV ++ SR+ D S+ EAA DLGA +T
Sbjct: 120 FSTLQHLIGWSHERGTTTVVIAHVTMCTAYVTIVMQSRIASVDISLEEAALDLGAGPIET 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
K+ +P L+PA+I++ L+ TLS DD V+T FV+G + TLP+ IYS ++ G +P +NA
Sbjct: 180 FFKITLPQLIPALITSALLTFTLSIDDLVVTEFVAGSDNPTLPMYIYSTVKNGPTPEINA 239
Query: 240 LSVILIVISILLTL 253
L+ I+I I ++ L
Sbjct: 240 LATIMIGIIVVGVL 253
>gi|70733207|ref|YP_262980.1| polyamine transport protein PotI [Pseudomonas fluorescens Pf-5]
gi|68347506|gb|AAY95112.1| polyamine transport protein PotI PA0304 [Pseudomonas fluorescens
Pf-5]
Length = 296
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 101/255 (39%), Positives = 159/255 (62%), Gaps = 10/255 (3%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ R S ++ +L ++F YLP+++LVIYSFN K + VW G+S++WY L + + +
Sbjct: 1 MKRFSFSSLMLVLGLLFIYLPMLILVIYSFNASKLVTVWGGWSIKWYIGLLD-NQQLMGS 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
S+ IA +++ + +GT A L + FKG+ + PLV+P++I G+SLL++
Sbjct: 60 VMRSLEIACYTAVAAVALGTLAAFVLTRITRFKGRTLFGGLVTAPLVMPEVITGLSLLLL 119
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F + +G I+TI+IAHTTF YV +V +RL E D SI EAA DLGA +
Sbjct: 120 FVAMAQAVGWPQERGIVTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGARPWKV 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
+ IPM+ P++ + +M+ LS DD V+ FVSGPGS+TLP+ ++S +RLGV P +NA
Sbjct: 180 FFLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINA 239
Query: 240 L-SVILIVISILLTL 253
+ S+IL+ +S++ L
Sbjct: 240 VASLILLAVSLVTFL 254
>gi|42518815|ref|NP_964745.1| ABC transporter permease component, Spermidine/putrescine
[Lactobacillus johnsonii NCC 533]
gi|41583101|gb|AAS08711.1| ABC transporter permease component, Spermidine/putrescine
[Lactobacillus johnsonii NCC 533]
Length = 265
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 110/248 (44%), Positives = 163/248 (65%), Gaps = 3/248 (1%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ + K S I F ++ YLP+ L+ YSF+ G M + F+L Y++LF + N +
Sbjct: 1 MKKIKWSRIYFAFVLVLMYLPIFYLIFYSFSSGHNMDHFEKFTLSHYQDLF-NDNRLLAI 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
F +I +AL+SSL++TIIGTFGAIA+ + + KG+K L ++ + +V PD+IIG S LI
Sbjct: 60 FLETILLALLSSLIATIIGTFGAIAISQTKNKKGRKTLLALNNVLMVSPDVIIGASFLIF 119
Query: 126 FATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVII 185
F L LG ++ ++H F+IP V+ +VL RL EFDYS+V+AA DLGA+ Q +KV+I
Sbjct: 120 FTFLGIGLGFGSVLLSHIAFSIPIVVLMVLPRLKEFDYSLVDAARDLGASTWQVYSKVMI 179
Query: 186 PMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
P + P I++ F MALT S DDF +TFFV+G G STL + IYS R G++ +NALS ++
Sbjct: 180 PAITPGILAGFFMALTYSLDDFAVTFFVTGNGFSTLSVEIYSRARQGINLEINALSTVMF 239
Query: 246 VISILLTL 253
+ ++L L
Sbjct: 240 IFVMILVL 247
>gi|116334426|ref|YP_795953.1| spermidine/putrescine ABC transporter permease protein
[Lactobacillus brevis ATCC 367]
gi|116099773|gb|ABJ64922.1| spermidine/putrescine ABC transporter permease protein
[Lactobacillus brevis ATCC 367]
Length = 267
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 101/244 (41%), Positives = 155/244 (63%), Gaps = 3/244 (1%)
Query: 10 RRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGMV-WNGFSLRWYKELFKHSNNIWKAFY 68
++K + + I+ I Y P++ L+ YSF+ G M ++GF+ R Y+ LF S +
Sbjct: 2 KQKFTRLYLIVVFIILYAPIVFLIAYSFSQGDTMTNYHGFTWRHYQTLFSDSR-MLAIVA 60
Query: 69 YSIFIALISSLVSTIIGTFGAIALKWFDFK-GKKYLKNMSVLPLVVPDIIIGVSLLIMFA 127
++ +AL+SSL++T+IGT GA+ + + ++ L ++ + +V PD+IIG S LI F
Sbjct: 61 NTLLVALLSSLIATLIGTLGALGINRTTKRVTRESLLTLNNVLMVSPDVIIGASFLIFFT 120
Query: 128 TLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPM 187
LK LG ++ ++H F IP V+ +VL RL E S+++AA DLGAT RQ L++VIIP
Sbjct: 121 MLKIPLGFGSVLLSHIAFEIPIVVLMVLPRLREMSASMLDAAQDLGATTRQLLSQVIIPF 180
Query: 188 LLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
+ P I + F MALT S DDF +TFFV+G G STL + IYS R G++ +NALS ++ +
Sbjct: 181 ISPGIFAGFFMALTYSLDDFAVTFFVTGNGFSTLSVEIYSRARQGINLEINALSGVMFLF 240
Query: 248 SILL 251
S+LL
Sbjct: 241 SLLL 244
>gi|26991853|ref|NP_747278.1| putrescine ABC transporter, permease protein [Pseudomonas putida
KT2440]
gi|24986971|gb|AAN70742.1|AE016718_1 putrescine ABC transporter, permease protein [Pseudomonas putida
KT2440]
Length = 297
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 101/252 (40%), Positives = 159/252 (63%), Gaps = 10/252 (3%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ R S ++ +L ++F YLP+++LVIYSFN K + VW G+S++WY L +S + +
Sbjct: 1 MKRFSFSKLMLVLGLLFIYLPMLILVIYSFNASKLVTVWGGWSIKWYVGLLDNSQ-LMGS 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
S+ IA +++ + +GT A L + FKG+ + PLV+P++I G+SLL++
Sbjct: 60 VMRSLEIACYTAVAAVALGTLAAFVLTRVTRFKGRTLFGGLVTAPLVMPEVITGLSLLLL 119
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F + +G I+TI+IAHTTF YV +V +RL E D SI EAA DLGA +
Sbjct: 120 FVAMAQMIGWPQERGIVTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGAKPWKV 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
+ IPM+ P++ + +M+ LS DD V+ FVSGPGS+TLP+ ++S +RLGV P +NA
Sbjct: 180 FFLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINA 239
Query: 240 L-SVILIVISIL 250
+ S+IL+ +S++
Sbjct: 240 VASLILLSVSLV 251
>gi|83716719|ref|YP_440145.1| putrescine ABC transporter, permease protein [Burkholderia
thailandensis E264]
gi|83650544|gb|ABC34608.1| putrescine ABC transporter, permease protein [Burkholderia
thailandensis E264]
Length = 309
Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats.
Identities = 93/237 (39%), Positives = 152/237 (64%), Gaps = 9/237 (3%)
Query: 17 IFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIAL 75
+ L +F Y+P++ LV+YSFN+ K + VW+GFSL+WY L++ + + + + S+ I L
Sbjct: 12 VLTLGFLFLYIPIVSLVVYSFNESKLVTVWSGFSLKWYAALWQ-DDELLTSAWLSLKIGL 70
Query: 76 ISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLG 134
+++ S IGT+ L F F+G M PLV+P++I G+SLL++F L+ +G
Sbjct: 71 LTAFASVFIGTWAGFVLARFGRFRGFTLYTGMINAPLVIPEVIQGISLLLLFVALEQMVG 130
Query: 135 ------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPML 188
++TI+I H + YV IV SR+ E + S+ EAA DLGAT + + +P++
Sbjct: 131 WPKGRGMVTIWIGHVMLCVSYVAIIVQSRVKELNKSLEEAALDLGATPLKVFFVITLPLI 190
Query: 189 LPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
A++S +L++ TLS DD V++ F+SGPGS+TLPL ++S +RLG++P +NAL+ + I
Sbjct: 191 SQALLSGWLLSFTLSIDDLVLSAFLSGPGSTTLPLVVFSRVRLGLNPEMNALATLFI 247
>gi|55821512|ref|YP_139954.1| Polyamine (putrescine/spermidine) ABC uptake transporter
membrane-spanning protein [Streptococcus thermophilus
LMG 18311]
gi|55737497|gb|AAV61139.1| Polyamine (putrescine/spermidine) ABC uptake transporter
membrane-spanning protein [Streptococcus thermophilus
LMG 18311]
Length = 267
Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats.
Identities = 98/244 (40%), Positives = 155/244 (63%), Gaps = 2/244 (0%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYY 69
+K + + L + YLP+ L+ +SFN G M + GF+L Y+ +F S +
Sbjct: 10 KKFANLYLALVFVIIYLPIFYLIAFSFNSGGDMNSFAGFTLDNYQSMFSDSR-LMLILVQ 68
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
+ F+A +S+L++TIIGTFG+I + K + + +++ + +V PD++IG S LI+F +
Sbjct: 69 TFFLAFLSALLATIIGTFGSIFIYESKQKQQTGILSLNNVLMVAPDVMIGASFLILFTCI 128
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
F+LG +++ ++H F+IP V+ +VL RL E + +V AAYDLGAT Q L +V++P L
Sbjct: 129 GFQLGFVSVLLSHIAFSIPIVVLMVLPRLKEMNRDMVNAAYDLGATQWQMLREVMLPYLT 188
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
P II+ + MA T S DDF +TFFV+G G STL + +YS R G+S +NALS ++ + SI
Sbjct: 189 PGIIAGYFMAFTYSLDDFAVTFFVTGNGFSTLAVEVYSRARKGISLEINALSTVVFLFSI 248
Query: 250 LLTL 253
LL +
Sbjct: 249 LLVI 252
>gi|56413791|ref|YP_150866.1| spermidine/putrescine ABC transporter membrane component
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
gi|56128048|gb|AAV77554.1| spermidine/putrescine transport system permease protein PotC
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
Length = 259
Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 162/232 (69%), Gaps = 2/232 (0%)
Query: 34 IYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIAL 92
+ SFN + G+ W GF+ +WY EL +++++ +A +S+ +A+ S+ +T+IG+ A+AL
Sbjct: 27 VNSFNSSRFGINWQGFTTKWY-ELLVNNDSLLQAAQHSLTMAIFSATFATLIGSLTAVAL 85
Query: 93 KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVLF 152
+ F+GK ++ M + ++ PDI++ +SLL++F L +LG ++ +H TF++P+V+
Sbjct: 86 YRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFSLPFVVV 145
Query: 153 IVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFF 212
V SRL FD + EAA DLGA+ L K+I+P+ +PA+ + +L++ TLS DD V++ F
Sbjct: 146 TVYSRLKGFDVRMQEAAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTLSMDDVVVSSF 205
Query: 213 VSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNFIK 264
V+GPG LPL+IYSM+++GVSP VNAL+ +L+V+S+++ ++++ + ++ K
Sbjct: 206 VTGPGYEILPLKIYSMVKVGVSPEVNALATVLLVLSLVMVIASQLIARDKTK 257
>gi|89256069|ref|YP_513431.1| polyamine transporter, subunit I, ABC transporter, membrane protein
[Francisella tularensis subsp. holarctica]
gi|115314546|ref|YP_763269.1| polyamine ABC superfamily ATP binding cassette transporter,
membrane protein [Francisella tularensis subsp.
holarctica OSU18]
gi|156502082|ref|YP_001428147.1| polyamine transporter, subunit I, ABC transporter, membrane protein
[Francisella tularensis subsp. holarctica FTA]
gi|89143900|emb|CAJ79118.1| polyamine transporter, subunit I, ABC transporter, membrane protein
[Francisella tularensis subsp. holarctica LVS]
gi|115129445|gb|ABI82632.1| polyamine ABC superfamily ATP binding cassette transporter,
membrane protein [Francisella tularensis subsp.
holarctica OSU18]
gi|134253220|gb|EBA52314.1| polyamine transporter, subunit I, ABC transporter, membrane protein
[Francisella tularensis subsp. holarctica 257]
gi|156252685|gb|ABU61191.1| polyamine transporter, subunit I, ABC transporter, membrane protein
[Francisella tularensis subsp. holarctica FTA]
Length = 268
Score = 160 bits (404), Expect = 9e-38, Method: Composition-based stats.
Identities = 105/254 (41%), Positives = 163/254 (64%), Gaps = 9/254 (3%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ R S I+ IL +IF Y+PLI+LV++SF++ + + +W GF+ WY E+ H +I A
Sbjct: 1 MKRFSFSKIMLILGLIFLYIPLIILVVFSFSNSEIINLWGGFTFDWYYEVI-HDEDIINA 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWFDF-KGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
+ S+ IA I+S ++TI+GT A A+ F F + + +L + PLV+PDII+GV+LL+M
Sbjct: 60 TFTSLKIATITSAIATILGTIIAYAMTRFKFFRSRSFLYGLVATPLVLPDIILGVALLLM 119
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F+TL+ +G T+ IAH T YV ++ SR+ D S+ EAA DLGA +T
Sbjct: 120 FSTLQHLIGWSHERGTTTVVIAHVTMCTAYVTIVMQSRIASVDISLEEAALDLGAGPIET 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
K+ +P L+PA+I++ L+ TLS DD V+T FV+G + TLP+ IYS ++ G +P +NA
Sbjct: 180 FFKITLPQLIPALITSALLTFTLSIDDLVVTEFVAGSDNPTLPMYIYSTVKNGPTPEINA 239
Query: 240 LSVILIVISILLTL 253
L+ I+I I ++ L
Sbjct: 240 LATIMIGIIVVGVL 253
>gi|148544851|ref|YP_001272221.1| Ornithine carbamoyltransferase [Lactobacillus reuteri F275]
gi|148531885|gb|ABQ83884.1| Ornithine carbamoyltransferase [Lactobacillus reuteri F275]
Length = 272
Score = 160 bits (404), Expect = 9e-38, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 153/235 (65%), Gaps = 2/235 (0%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L + Y P++ LV++SF+ G+ M ++GFS + Y +L + I ++ +A ++S
Sbjct: 15 LVFVILYAPILYLVVFSFSSGQTMEKYHGFSWQHYADLLADTRMI-TIVINTLLVAFLAS 73
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
L++TIIGT GA+A+K K L +++ + +V PD+IIG S LI F L +LG +++
Sbjct: 74 LLATIIGTLGALAIKDARRPWKNSLLSLNNVLMVSPDVIIGASFLIFFTMLGVRLGFVSV 133
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
++H F IP V+ +VL +L+E ++V+AAYDLGA+ Q L++VI+P + P I + + M
Sbjct: 134 LLSHIAFCIPIVVLMVLPKLNEMSPTLVDAAYDLGASRWQVLSRVILPSIAPGIFAGYFM 193
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTL 253
A T S DDF +TFFV+G G STL + IYS R G++ +NALS ++ ++S+LL +
Sbjct: 194 AFTYSLDDFAVTFFVTGNGFSTLSVEIYSRARQGINLEINALSTLMFIVSLLLVI 248
>gi|146749577|gb|ABQ44374.1| spermidine/putrescine ABC transporter permease protein
[Lactobacillus reuteri]
Length = 272
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 93/235 (39%), Positives = 153/235 (65%), Gaps = 2/235 (0%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L + Y P++ LV++SF+ G+ M ++GFS + Y +L + I ++ +A ++S
Sbjct: 15 LVFVILYAPILYLVVFSFSSGQTMEKYHGFSWQHYADLLADTRMI-TIVINTLLVAFLAS 73
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
L++TIIGT GA+A+K K L +++ + +V PD+IIG S LI F L +LG +++
Sbjct: 74 LLATIIGTLGALAIKDARRPWKNSLLSLNNVLMVSPDVIIGASFLIFFTMLGVRLGFVSV 133
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
++H F IP V+ +VL +L+E ++V+AAYDLGA+ Q L++V++P + P I + + M
Sbjct: 134 LLSHIAFCIPIVVLMVLPKLNEMSPTLVDAAYDLGASRWQVLSRVVLPSIAPGIFAGYFM 193
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTL 253
A T S DDF +TFFV+G G STL + IYS R G++ +NALS ++ ++S+LL +
Sbjct: 194 AFTYSLDDFAVTFFVTGNGFSTLSVEIYSRARQGINLEINALSTLMFIVSLLLVI 248
>gi|110004085|emb|CAK98424.1| hypothetical abc transporter permease and substrate-binding
component transmembrane protein [Spiroplasma citri]
Length = 869
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 93/230 (40%), Positives = 150/230 (65%), Gaps = 7/230 (3%)
Query: 12 KTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYS 70
K+S++ I M+F Y+P+++L+++SFN G+ M ++NGFS RWYK+L + ++ S
Sbjct: 6 KSSYMALI--MLFIYIPIMILILFSFNSGESMSIFNGFSDRWYKQL-ANEQPFLQSIIVS 62
Query: 71 IFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLK 130
+F A+I+++VS IIGT AI L +K +++ +PL+ DII VSL+++F L
Sbjct: 63 VFTAIIATVVSVIIGTLAAIGLSRARRVTQKMTLSITNIPLINADIITAVSLMMLFIALG 122
Query: 131 FKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLP 190
G++T+ +AH +F++PYV+ VL RL + D ++EA+ DLGA QTL K+I+P+L P
Sbjct: 123 GNFGMLTLVLAHISFDVPYVIITVLPRLRKVDPKLIEASLDLGAKPSQTLRKIILPILKP 182
Query: 191 AIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL 240
AII+A +A +SFDDF+I++F G + IY+M R + P +NA
Sbjct: 183 AIIAAAAIAFAMSFDDFIISYFTGGDDVNVATF-IYTMKR--IKPFINAF 229
>gi|26246880|ref|NP_752920.1| Putrescine transport system permease protein potI [Escherichia coli
CFT073]
gi|26107280|gb|AAN79463.1|AE016758_67 Putrescine transport system permease protein potI [Escherichia coli
CFT073]
Length = 295
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 105/244 (43%), Positives = 154/244 (63%), Gaps = 9/244 (3%)
Query: 10 RRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFY 68
R +I +L F Y P+++LVIYSFN K + VW G+S RWY EL + + + A
Sbjct: 22 RSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELLR-DDAMMSAVG 80
Query: 69 YSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFA 127
S+ IA ++ + I+GT A+ L F F+G M PLV+PD+I G+SLL++F
Sbjct: 81 LSLTIAACAATAAAILGTIAAVVLVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFV 140
Query: 128 TLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLT 181
L +G ++TI++AH TF YV ++ SRL E D SI EAA DLGAT +
Sbjct: 141 ALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFF 200
Query: 182 KVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALS 241
+ +PM++PAIIS +L+A TLS DD VI FVSGPG++TLP+ ++S +R+GV+P +NAL+
Sbjct: 201 VITLPMIMPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALA 260
Query: 242 VILI 245
+++
Sbjct: 261 TLIL 264
>gi|91209891|ref|YP_539877.1| putrescine transport system permease protein potI [Escherichia coli
UTI89]
gi|117623037|ref|YP_851950.1| putrescine transport system permease protein PotI [Escherichia coli
APEC O1]
gi|91071465|gb|ABE06346.1| putrescine transport system permease protein potI [Escherichia coli
UTI89]
gi|115512161|gb|ABJ00236.1| putrescine transport system permease protein PotI [Escherichia coli
APEC O1]
Length = 295
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 105/244 (43%), Positives = 154/244 (63%), Gaps = 9/244 (3%)
Query: 10 RRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFY 68
R +I +L F Y P+++LVIYSFN K + VW G+S RWY EL + + + A
Sbjct: 22 RSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELLR-DDAMMSAVG 80
Query: 69 YSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFA 127
S+ IA ++ + I+GT A+ L F F+G M PLV+PD+I G+SLL++F
Sbjct: 81 LSLTIAACAATAAAILGTIAAVVLVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFV 140
Query: 128 TLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLT 181
L +G ++TI++AH TF YV ++ SRL E D SI EAA DLGAT +
Sbjct: 141 ALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFF 200
Query: 182 KVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALS 241
+ +PM++PAIIS +L+A TLS DD VI FVSGPG++TLP+ ++S +R+GV+P +NAL+
Sbjct: 201 VITLPMIMPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALA 260
Query: 242 VILI 245
+++
Sbjct: 261 TLIL 264
>gi|156863198|gb|EDO56629.1| hypothetical protein CLOL250_02724 [Clostridium sp. L2-50]
Length = 266
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 95/240 (39%), Positives = 160/240 (66%), Gaps = 5/240 (2%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKG---MVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALI 76
L I ++P+ V+V+ SFN + W GF+ WY +LF++ ++ +F ++ IAL+
Sbjct: 20 LIYIVLFMPIAVVVVNSFNATTSKPYLTWKGFTFDWYVKLFEN-QSLLTSFGNTMIIALV 78
Query: 77 SSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGII 136
++++STIIGT GAI + + FKGK + + +P+V+P+I++G+SLL +FA + G++
Sbjct: 79 TTVLSTIIGTLGAIGMYKYKFKGKGIIDGLLYIPVVIPEIVMGISLLTVFAKVSIPRGML 138
Query: 137 TIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAF 196
T+ IAH TF +PYV+F V +RL +D SI EA+ DLGA +T ++ +P+L P I +
Sbjct: 139 TLIIAHITFCVPYVIFNVRARLSGYDISIEEASMDLGANRIRTFWEITLPVLRPGITAGA 198
Query: 197 LMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTK 256
L+A TLS DD +I++FV+G + T PL++ + I+ GV+P VNALS +++ +I+ + T+
Sbjct: 199 LLAFTLSIDDVIISYFVNG-NTMTYPLQVMASIKSGVAPDVNALSALILAGTIIFVVLTQ 257
>gi|116629919|ref|YP_815091.1| spermidine/putrescine ABC transporter permease protein
[Lactobacillus gasseri ATCC 33323]
gi|116095501|gb|ABJ60653.1| spermidine/putrescine ABC transporter permease protein
[Lactobacillus gasseri ATCC 33323]
Length = 265
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 109/248 (43%), Positives = 163/248 (65%), Gaps = 3/248 (1%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGMV-WNGFSLRWYKELFKHSNNIWKA 66
+ + K S I F ++ YLP+ L+ YSF+ G M + F+L Y++LF + N +
Sbjct: 1 MKKIKWSRIYFAFVLVLMYLPIFYLIYYSFSSGHNMDHFEKFTLSHYQDLF-NDNRLLAI 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
F +I +AL+SSL++T+IGTFGAIA+ + + KG+K L ++ + +V PD+IIG S LI
Sbjct: 60 FLETILLALLSSLIATVIGTFGAIAISQTKNKKGQKTLLALNNVLMVSPDVIIGASFLIF 119
Query: 126 FATLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVII 185
F L LG ++ ++H F+IP V+ +VL RL EFDYS+V+AA DLGA+ Q +KV+I
Sbjct: 120 FTFLGIGLGFGSVLLSHIAFSIPIVVLMVLPRLKEFDYSLVDAARDLGASTWQVYSKVMI 179
Query: 186 PMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILI 245
P + P I++ F MALT S DDF +TFFV+G G STL + IYS R G++ +NALS ++
Sbjct: 180 PAITPGILAGFFMALTYSLDDFAVTFFVTGNGFSTLSVEIYSRARQGINLEINALSTLMF 239
Query: 246 VISILLTL 253
+ ++L L
Sbjct: 240 IFVMVLVL 247
>gi|154498142|ref|ZP_02036520.1| hypothetical protein BACCAP_02123 [Bacteroides capillosus ATCC
29799]
gi|150273132|gb|EDN00289.1| hypothetical protein BACCAP_02123 [Bacteroides capillosus ATCC
29799]
Length = 318
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 89/243 (36%), Positives = 143/243 (58%), Gaps = 28/243 (11%)
Query: 26 YLPLIVLVIYSFNDGKG-MVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTII 84
Y P+ VL+++SFND K VW GF+L WY +LF+ ++ + A ++ ++ +++L++T++
Sbjct: 20 YAPIFVLIVFSFNDSKSNAVWGGFTLDWYVQLFQ-NDTVLSALRTTLLVSFLATLIATVV 78
Query: 85 GTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFA----------------- 127
GT AI + + ++ +PL DII GVS++++F
Sbjct: 79 GTAAAIGFYNMKRRPRGIFLGINNIPLTNADIITGVSMMLLFVFAGQMLASLSGWLNSLD 138
Query: 128 ---------TLKFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQ 178
L F LG T+ IAH TF+IPYV+ V+ +L + D +I EAA DLGAT+
Sbjct: 139 WVIEANLWFDLGFNLGFGTLLIAHITFDIPYVILSVMPKLRQLDPNIAEAAQDLGATSLY 198
Query: 179 TLTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVN 238
KV++P ++P +++ L+A T+S DDFVI++F +G STL + +YSM+R VSP +N
Sbjct: 199 AFRKVVLPEIMPGVVNGALIAFTMSIDDFVISYFTAGSQESTLSMVVYSMVRRRVSPEIN 258
Query: 239 ALS 241
ALS
Sbjct: 259 ALS 261
>gi|150379254|ref|ZP_01918448.1| binding-protein-dependent transport systems inner membrane
component [Shewanella sediminis HAW-EB3]
gi|150255538|gb|EDM93233.1| binding-protein-dependent transport systems inner membrane
component [Shewanella sediminis HAW-EB3]
Length = 275
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 101/258 (39%), Positives = 163/258 (63%), Gaps = 9/258 (3%)
Query: 4 MSNNLNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNN 62
MS+ ++ S I+ M F Y+P+ +L+ YSFN+ K + VW GFS +WY ELF+
Sbjct: 1 MSSLKDKLSFSTIMLWAGMFFLYVPMFILIFYSFNESKLVTVWGGFSAKWYGELFR-DQQ 59
Query: 63 IWKAFYYSIFIALISSLVSTIIGTFGAIALKWFDFK-GKKYLKNMSVLPLVVPDIIIGVS 121
I A + S+ +A +S ++ I+GT A + F GK L +M PLV+P++I G+S
Sbjct: 60 ILDAVWTSLRVAFFASSMAVILGTMAAFVMTRFSRSWGKTTLSSMITAPLVMPEVITGLS 119
Query: 122 LLIMFATLK------FKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGAT 175
LL++F + + G++T+++AH+TF YV +V +RL E D SI EAA DLGAT
Sbjct: 120 LLLLFVHMADTFGWPAERGMLTVWLAHSTFCAAYVAVVVSARLRELDQSIEEAAQDLGAT 179
Query: 176 NRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSP 235
+T + +PM+ P++++ +L++ +LS DD VI F SGPG++TLP+ ++S +R+GVSP
Sbjct: 180 PLKTFFFITVPMISPSLMAGWLLSFSLSLDDLVIASFTSGPGATTLPMVVFSSVRMGVSP 239
Query: 236 VVNALSVILIVISILLTL 253
+NAL+ ++I+ L+
Sbjct: 240 KINALATLIILTVSLIAF 257
>gi|124267095|ref|YP_001021099.1| putrescine transport system permease protein [Methylibium
petroleiphilum PM1]
gi|124259870|gb|ABM94864.1| putrescine transport system permease protein [Methylibium
petroleiphilum PM1]
Length = 288
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 96/243 (39%), Positives = 151/243 (62%), Gaps = 8/243 (3%)
Query: 23 IFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVS 81
+F YLP++ LVIYSFND VW GF+L+WY +L N + + S+ IA ++ S
Sbjct: 27 LFLYLPIVALVIYSFNDSPLPSVWAGFTLKWYAKL-ATDNEMLSGLWLSLKIAFFTACGS 85
Query: 82 TIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGI----- 135
++GT A AL K+ F+G+ M PLV+P++I+G+SLL+M +++ LG
Sbjct: 86 VVLGTLAAFALVKYTRFRGRTLFGGMVSAPLVMPEVIVGLSLLLMLVSVQRALGFPERGT 145
Query: 136 ITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISA 195
+TI++ H + Y +V +RL E + + EAA DLGA Q T V +PM+ +++SA
Sbjct: 146 LTIWLGHLLLGMAYATVVVQARLQELNPQLEEAAMDLGARPAQVFTLVTLPMIAQSLVSA 205
Query: 196 FLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLST 255
+L+ T+S DD V++ F+SGPGS+T+PL I+S RLGV+P VNA++ ++I I + ++
Sbjct: 206 WLLTFTISLDDVVLSAFLSGPGSTTMPLVIFSRARLGVNPSVNAMATVIITIVFIGVITA 265
Query: 256 KKL 258
L
Sbjct: 266 SYL 268
>gi|148550284|ref|YP_001270386.1| Ornithine carbamoyltransferase [Pseudomonas putida F1]
gi|148514342|gb|ABQ81202.1| Ornithine carbamoyltransferase [Pseudomonas putida F1]
Length = 297
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 100/252 (39%), Positives = 159/252 (63%), Gaps = 10/252 (3%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ R S ++ +L ++F YLP+++LVIYSFN K + VW G+S++WY L ++ + +
Sbjct: 1 MKRFSFSKLMLVLGLLFIYLPMLILVIYSFNASKLVTVWGGWSIKWYVGLLDNTQ-LMGS 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
S+ IA +++ + +GT A L + FKG+ + PLV+P++I G+SLL++
Sbjct: 60 VMRSLEIACYTAVAAVALGTLAAFVLTRVTRFKGRTLFGGLVTAPLVMPEVITGLSLLLL 119
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F + +G I+TI+IAHTTF YV +V +RL E D SI EAA DLGA +
Sbjct: 120 FVAMAQMIGWPQERGIVTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGAKPWKV 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
+ IPM+ P++ + +M+ LS DD V+ FVSGPGS+TLP+ ++S +RLGV P +NA
Sbjct: 180 FFLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINA 239
Query: 240 L-SVILIVISIL 250
+ S+IL+ +S++
Sbjct: 240 VASLILLSVSLV 251
>gi|84318516|ref|ZP_00966939.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Pseudomonas aeruginosa C3719]
gi|84324384|ref|ZP_00972442.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Pseudomonas aeruginosa 2192]
gi|107099285|ref|ZP_01363203.1| hypothetical protein PaerPA_01000297 [Pseudomonas aeruginosa PACS2]
gi|116054030|ref|YP_788473.1| polyamine transport protein PotI [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115589251|gb|ABJ15266.1| polyamine transport protein PotI [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126169394|gb|EAZ54905.1| polyamine transport protein PotI [Pseudomonas aeruginosa C3719]
Length = 289
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 100/252 (39%), Positives = 157/252 (62%), Gaps = 10/252 (3%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ R S ++ I+ ++F YLP+++LVIYSFN K + VW G+S++WY L ++ + +
Sbjct: 1 MKRWNFSNVMLIVGLLFIYLPMLILVIYSFNASKLVTVWGGWSVKWYVGLLDNTQLV-SS 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
S+ IA ++ S ++GT A L F+G+ M PLV+P++I G+SLL++
Sbjct: 60 VGRSLEIAFYTAFSSVLLGTLAAFVLTRIPRFRGRTLFGGMVTAPLVMPEVITGLSLLLL 119
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F + +G I+TI+IAHT+F YV +V +RL E D SI EAA DLGA +
Sbjct: 120 FVAMAQLIGWPQERGIVTIWIAHTSFCSSYVAVVVSARLRELDLSIEEAAMDLGAKPWKV 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
+ IPM+ P++ + +M+ LS DD V+ FVSGPGS+TLP+ ++S +RLGV P +NA
Sbjct: 180 FLLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINA 239
Query: 240 L-SVILIVISIL 250
+ S+IL+ +S+
Sbjct: 240 VASLILLSVSLF 251
>gi|145641349|ref|ZP_01796928.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
influenzae R3021]
gi|145273892|gb|EDK13759.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
influenzae 22.4-21]
Length = 256
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 99/250 (39%), Positives = 168/250 (67%), Gaps = 4/250 (1%)
Query: 12 KTSFIIFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYS 70
+ +F+ + A + Y+P+I+LV SFN+ + G+ W GFS WY+ LF +++ + +A +S
Sbjct: 6 RNAFMFVVYA--YLYIPIIILVTNSFNEDRYGLSWKGFSWNWYERLF-NNDTLIQAAIHS 62
Query: 71 IFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLK 130
+ IA ++ ++TI+G AIAL + F+GK+ + M + ++ PDI++ VSLL +F +
Sbjct: 63 VTIAFFAATLATIVGGLTAIALYRYRFRGKQAVSGMLFIVMMSPDIVMAVSLLALFMVVG 122
Query: 131 FKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLP 190
LG ++ +AH TF +PYV + SRL+ FD ++EAA DLGA+ L K+I+P+ LP
Sbjct: 123 ISLGFWSLLLAHVTFCLPYVTVTIFSRLNGFDSRMLEAAKDLGASEVTILRKIILPLALP 182
Query: 191 AIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISIL 250
A++S +L++ T+S DD V++ FVSG LPLRI+S+++ GV+P VNAL+ I+IV+S+
Sbjct: 183 AVVSGWLLSFTISLDDVVVSSFVSGVSYEILPLRIFSLVKTGVTPEVNALATIMIVLSLA 242
Query: 251 LTLSTKKLQK 260
L + ++ + +
Sbjct: 243 LVVLSQLITR 252
>gi|55823440|ref|YP_141881.1| spermidine/putrescine ABC transporter permease protein
[Streptococcus thermophilus CNRZ1066]
gi|55739425|gb|AAV63066.1| spermidine/putrescine ABC transporter permease protein
[Streptococcus thermophilus CNRZ1066]
Length = 267
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 98/244 (40%), Positives = 155/244 (63%), Gaps = 2/244 (0%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYY 69
+K + + L + YLP+ L+ +SFN G M + GF+L Y+ +F S +
Sbjct: 10 KKFANLYLALVFVIIYLPIFYLIAFSFNSGGDMNSFAGFTLDNYQSMFSDSR-LMLILVQ 68
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
+ F+A +S+L++TIIGTFG+I + K + + +++ + +V PD++IG S LI+F +
Sbjct: 69 TFFLAFLSALLATIIGTFGSIFIYESKQKQQTGILSLNNVLMVAPDVMIGASFLILFTWI 128
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
F+LG +++ ++H F+IP V+ +VL RL E + +V AAYDLGAT Q L +V++P L
Sbjct: 129 GFQLGFVSVLLSHIAFSIPIVVLMVLPRLKEMNRDMVNAAYDLGATQWQMLREVMLPYLT 188
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
P II+ + MA T S DDF +TFFV+G G STL + +YS R G+S +NALS ++ + SI
Sbjct: 189 PGIIAGYFMAFTYSLDDFAVTFFVTGNGFSTLAVEVYSRARKGISLEINALSTVVFLFSI 248
Query: 250 LLTL 253
LL +
Sbjct: 249 LLVI 252
>gi|92089100|ref|ZP_01274053.1| Binding-protein-dependent transport systems inner membrane
component [Lactobacillus reuteri 100-23]
gi|91804161|gb|EAS89007.1| Binding-protein-dependent transport systems inner membrane
component [Lactobacillus reuteri 100-23]
Length = 272
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 152/235 (64%), Gaps = 2/235 (0%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L + Y P++ LVI+SF+ G+ M ++GFS + Y +L + I ++ +A ++S
Sbjct: 15 LVFVILYAPILYLVIFSFSSGQTMEKYHGFSWQHYADLLADTRMI-TIVINTLLVAFLAS 73
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITI 138
L++TIIGT GA+A+K K L +++ + +V PD+IIG S LI F L +LG +++
Sbjct: 74 LLATIIGTLGALAIKDARRPWKNSLLSLNNVLMVSPDVIIGASFLIFFTMLGVRLGFVSV 133
Query: 139 FIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLM 198
++H F IP V+ +VL +L+E ++V+AAYDLGA+ Q ++VI+P + P I + + M
Sbjct: 134 LLSHIAFCIPIVVLMVLPKLNEMSPTLVDAAYDLGASRWQVFSRVILPSIAPGIFAGYFM 193
Query: 199 ALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTL 253
A T S DDF +TFFV+G G STL + IYS R G++ +NALS ++ ++S+LL +
Sbjct: 194 AFTYSLDDFAVTFFVTGNGFSTLSVEIYSRARQGINLEINALSTLMFIVSLLLVI 248
>gi|157083695|gb|ABV13373.1| hypothetical protein CKO_02250 [Citrobacter koseri ATCC BAA-895]
Length = 281
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 106/244 (43%), Positives = 156/244 (63%), Gaps = 9/244 (3%)
Query: 10 RRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFY 68
R +I +L F Y P+++LVIYSFN K + VW G+S RWY ELF+ S I A
Sbjct: 8 RSPWRIVILVLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELFRDSAMI-SAVG 66
Query: 69 YSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFA 127
S+ IA ++ ++ I+GT A+ + F F+G M PLV+PD+I G+SLL++F
Sbjct: 67 LSLTIAACAATMAAILGTIAAVVMVRFGRFRGANGFAFMITAPLVMPDVITGLSLLLLFV 126
Query: 128 TLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLT 181
L +G ++TI++AH TF YV ++ SRL E D SI EAA DLGAT +
Sbjct: 127 ALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFF 186
Query: 182 KVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALS 241
+ +PM++PA+IS +L+A TLS DD VI FVSGPG++TLP+ ++S +R+GV+P +NAL+
Sbjct: 187 VITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALA 246
Query: 242 VILI 245
+++
Sbjct: 247 TLIL 250
>gi|113476390|ref|YP_722451.1| binding-protein-dependent transport systems inner membrane
component [Trichodesmium erythraeum IMS101]
gi|110167438|gb|ABG51978.1| binding-protein-dependent transport systems inner membrane
component [Trichodesmium erythraeum IMS101]
Length = 284
Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 100/229 (43%), Positives = 142/229 (62%), Gaps = 3/229 (1%)
Query: 16 IIFILAM-IFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFI 73
IIF ++M +F YLP+ VL YSFN K W GF+L+WY +LF+ I A S+ +
Sbjct: 29 IIFTVSMFLFMYLPIFVLTFYSFNKSKYSSGWEGFTLQWYVKLFQDIR-ILVALQNSLTV 87
Query: 74 ALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKL 133
A + ++ ++GT A+ L + F+GK +S LPL++PDI I V+ L+ A L +L
Sbjct: 88 AFFAVAIAAVLGTLMAVGLAKYKFRGKSLYLGISYLPLIIPDIAIAVATLVFLAALAIRL 147
Query: 134 GIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAII 193
+ TI AH F + Y+ +V +RL + D ++ EAA DLGAT + KV++P LLP I+
Sbjct: 148 SLGTIIAAHIVFCLAYIGLVVSTRLADLDPNLEEAALDLGATPVEAFIKVLLPQLLPGIV 207
Query: 194 SAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSV 242
S L+A LS DDF+I F SG G +TLP+ I+S IR GV P +NALSV
Sbjct: 208 SGCLLAFVLSMDDFLIASFTSGSGVTTLPMEIFSRIRTGVKPDINALSV 256
>gi|126196779|gb|EAZ60842.1| polyamine transport protein PotI [Pseudomonas aeruginosa 2192]
Length = 288
Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 100/250 (40%), Positives = 156/250 (62%), Gaps = 10/250 (4%)
Query: 10 RRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFY 68
R S ++ I+ ++F YLP+++LVIYSFN K + VW G+S++WY L ++ + +
Sbjct: 2 RWNFSNVMLIVGLLFIYLPMLILVIYSFNASKLVTVWGGWSVKWYVGLLDNTQLV-SSVG 60
Query: 69 YSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIMFA 127
S+ IA ++ S ++GT A L F+G+ M PLV+P++I G+SLL++F
Sbjct: 61 RSLEIAFYTAFSSVLLGTLAAFVLTRIPRFRGRTLFGGMVTAPLVMPEVITGLSLLLLFV 120
Query: 128 TLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLT 181
+ +G I+TI+IAHT+F YV +V +RL E D SI EAA DLGA +
Sbjct: 121 AMAQLIGWPQERGIVTIWIAHTSFCSSYVAVVVSARLRELDLSIEEAAMDLGAKPWKVFL 180
Query: 182 KVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNAL- 240
+ IPM+ P++ + +M+ LS DD V+ FVSGPGS+TLP+ ++S +RLGV P +NA+
Sbjct: 181 LITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINAVA 240
Query: 241 SVILIVISIL 250
S+IL+ +S+
Sbjct: 241 SLILLSVSLF 250
>gi|145297281|ref|YP_001140122.1| ABC-type putrescine transporter, permease protein [Aeromonas
salmonicida subsp. salmonicida A449]
gi|142850053|gb|ABO88374.1| ABC-type putrescine transporter, permease protein [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 280
Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 97/248 (39%), Positives = 154/248 (62%), Gaps = 9/248 (3%)
Query: 16 IIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYYSIFIA 74
++ L ++F YLP++++VIYSFN K + VW G+SL+WY L + I + S+ IA
Sbjct: 9 MMLWLGLLFIYLPMVIMVIYSFNSSKLVTVWGGWSLKWYFGLLDNKQLI-GSVLRSLEIA 67
Query: 75 LISSLVSTIIGTFGAIALKWF-DFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLK--- 130
L +++ + +GT A L F+G+ M PLV+P++I G+SLL++F +
Sbjct: 68 LYTAVAAVALGTVAAFVLTRIPHFRGRTLFGGMVTAPLVMPEVITGLSLLLLFVAMAQLV 127
Query: 131 ---FKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPM 187
+ G++TI+IAHTTF YV +V +RL E D SI EAA DLGA + + IPM
Sbjct: 128 GWPAERGMLTIWIAHTTFCTAYVAIVVSARLRELDLSIEEAAMDLGAKPWKVFFLITIPM 187
Query: 188 LLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVI 247
+ P++ + +M+ LS DD V+ FVSGPG++TLP+ ++S +RLGV P +NA++ ++++
Sbjct: 188 IAPSLAAGGMMSFALSLDDLVLASFVSGPGATTLPMEVFSAVRLGVKPEINAVASLILLS 247
Query: 248 SILLTLST 255
L T S+
Sbjct: 248 VSLFTFSS 255
>gi|34499555|ref|NP_903770.1| polyamine transport protein PotC [Chromobacterium violaceum ATCC
12472]
gi|34105406|gb|AAQ61761.1| polyamine transport protein PotC [Chromobacterium violaceum ATCC
12472]
Length = 256
Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 99/228 (43%), Positives = 148/228 (64%), Gaps = 10/228 (4%)
Query: 20 LAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISS 78
L +F YLPL+++V+YSFND + W GF+L+WY++LF H+ + A S+ I +I+S
Sbjct: 7 LTYLFLYLPLVIVVLYSFNDSRLNAEWVGFTLKWYQKLF-HNEKMLTAAGNSLLIGIIAS 65
Query: 79 LVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLK-----FKL 133
+TI+GT IAL + + L + + P+ +P++++GVSL+I F + +L
Sbjct: 66 FFATILGTLAGIALHKYKLR---LLPFLVLTPIAIPELLMGVSLVIFFVIVNQLIGILEL 122
Query: 134 GIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAII 193
G +TI ++H F I +V +V +R+ D S+VEAA DLGAT Q + +P++ P II
Sbjct: 123 GFVTILLSHIAFCIGFVAIVVRARMQGMDDSLVEAARDLGATPFQAFRLITLPVIKPGII 182
Query: 194 SAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALS 241
+ LMA TLS DDFVITFF +G G+S LPL IYSMI++ V+P VNA+S
Sbjct: 183 AGALMAFTLSIDDFVITFFTAGAGASMLPLEIYSMIKIAVTPEVNAVS 230
>gi|42629364|ref|ZP_00154911.1| COG1177: ABC-type spermidine/putrescine transport system, permease
component II [Haemophilus influenzae R2846]
gi|68250140|ref|YP_249252.1| spermidine/putrescine ABC transporter membrane component
[Haemophilus influenzae 86-028NP]
gi|145629581|ref|ZP_01785379.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
influenzae 22.1-21]
gi|145632912|ref|ZP_01788645.1| spermidine/putrescine ABC transporter membrane component
[Haemophilus influenzae 3655]
gi|145634349|ref|ZP_01790059.1| spermidine/putrescine ABC transporter membrane component
[Haemophilus influenzae PittAA]
gi|145636050|ref|ZP_01791720.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
influenzae PittHH]
gi|148825885|ref|YP_001290638.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
influenzae PittEE]
gi|148826819|ref|YP_001291572.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
influenzae PittGG]
gi|68058339|gb|AAX88592.1| spermidine/putrescine transport system permease protein
[Haemophilus influenzae 86-028NP]
gi|144978424|gb|EDJ88188.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
influenzae 22.1-21]
gi|144986568|gb|EDJ93134.1| spermidine/putrescine ABC transporter membrane component
[Haemophilus influenzae 3655]
gi|145268329|gb|EDK08323.1| spermidine/putrescine ABC transporter membrane component
[Haemophilus influenzae PittAA]
gi|145270572|gb|EDK10505.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
influenzae PittHH]
gi|148716045|gb|ABQ98255.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
influenzae PittEE]
gi|148718061|gb|ABQ99188.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus
influenzae PittGG]
Length = 256
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 100/250 (40%), Positives = 167/250 (66%), Gaps = 4/250 (1%)
Query: 12 KTSFIIFILAMIFFYLPLIVLVIYSFN-DGKGMVWNGFSLRWYKELFKHSNNIWKAFYYS 70
+ +F+ + A + Y+P+I+LV SFN D G+ W GFS WY+ LF +++ + +A +S
Sbjct: 6 RNAFMFVVYA--YLYIPIIILVTNSFNKDRYGLSWKGFSWNWYERLF-NNDTLIQAAIHS 62
Query: 71 IFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLK 130
+ IA ++ ++TI+G AIAL + F+GK+ + M + ++ PDI++ VSLL +F +
Sbjct: 63 VTIAFFAATLATIVGGLTAIALYRYRFRGKQAVSGMLFIVMMSPDIVMAVSLLALFMVVG 122
Query: 131 FKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLP 190
LG ++ +AH TF +PYV + SRL+ FD ++EAA DLGA+ L K+I+P+ LP
Sbjct: 123 ISLGFWSLLLAHVTFCLPYVTVTIFSRLNGFDSRMLEAAKDLGASEVTILRKIILPLALP 182
Query: 191 AIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISIL 250
A++S +L++ T+S DD V++ FVSG LPLRI+S+++ GV+P VNAL+ I+IV+S+
Sbjct: 183 AVVSGWLLSFTISLDDVVVSSFVSGVSYEILPLRIFSLVKTGVTPEVNALATIMIVLSLA 242
Query: 251 LTLSTKKLQK 260
L + ++ + +
Sbjct: 243 LVVLSQLITR 252
>gi|15595501|ref|NP_248995.1| polyamine transport protein PotI [Pseudomonas aeruginosa PAO1]
gi|9946149|gb|AAG03693.1|AE004468_5 polyamine transport protein PotI [Pseudomonas aeruginosa PAO1]
Length = 289
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 100/252 (39%), Positives = 156/252 (61%), Gaps = 10/252 (3%)
Query: 8 LNRRKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKA 66
+ R S ++ I+ ++F YLP+++LVIYSFN K + VW G+S++WY L ++ + +
Sbjct: 1 MKRWNFSNVMLIVGLLFIYLPMLILVIYSFNASKLVTVWGGWSVKWYVGLLDNTQLV-SS 59
Query: 67 FYYSIFIALISSLVSTIIGTFGAIALKWFD-FKGKKYLKNMSVLPLVVPDIIIGVSLLIM 125
S+ IA ++ S +GT A L F+G+ M PLV+P++I G+SLL++
Sbjct: 60 VGRSLEIAFYTAFSSVFLGTLAAFVLTRIPRFRGRTLFGGMVTAPLVMPEVITGLSLLLL 119
Query: 126 FATLKFKLG------IITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQT 179
F + +G I+TI+IAHT+F YV +V +RL E D SI EAA DLGA +
Sbjct: 120 FVAMAQLIGWPQERGIVTIWIAHTSFCSSYVAVVVSARLRELDLSIEEAAMDLGAKPWKV 179
Query: 180 LTKVIIPMLLPAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNA 239
+ IPM+ P++ + +M+ LS DD V+ FVSGPGS+TLP+ ++S +RLGV P +NA
Sbjct: 180 FLLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINA 239
Query: 240 L-SVILIVISIL 250
+ S+IL+ +S+
Sbjct: 240 VASLILLSVSLF 251
>gi|17402701|gb|AAL38944.1|AF325835_3 PotC [Salmonella enterica]
Length = 259
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 89/232 (38%), Positives = 161/232 (69%), Gaps = 2/232 (0%)
Query: 34 IYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIALISSLVSTIIGTFGAIAL 92
+ SFN + G+ W GF+ +WY EL +++++ +A +S+ +A+ S+ + +IG+ A+AL
Sbjct: 27 VNSFNSSRFGINWQGFTTKWY-ELLVNNDSLLQAAQHSLTMAIFSATFAALIGSLTAVAL 85
Query: 93 KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLGIITIFIAHTTFNIPYVLF 152
+ F+GK ++ M + ++ PDI++ +SLL++F L +LG ++ +H TF +P+V+
Sbjct: 86 YRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVV 145
Query: 153 IVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLLPAIISAFLMALTLSFDDFVITFF 212
V SRL FD ++EAA DLGA+ L K+I+P+ +PA+ + +L++ TLS DD V++ F
Sbjct: 146 TVYSRLKGFDVRMLEAAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTLSMDDVVVSSF 205
Query: 213 VSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISILLTLSTKKLQKNFIK 264
V+GPG LPL+IYSM+++GVSP VNAL+ +L+V+S+++ ++++ + ++ K
Sbjct: 206 VTGPGYEILPLKIYSMVKVGVSPEVNALATVLLVLSLVMVIASQLIARDKTK 257
>gi|116628226|ref|YP_820845.1| spermidine/putrescine ABC transporter permease protein
[Streptococcus thermophilus LMD-9]
gi|116101503|gb|ABJ66649.1| spermidine/putrescine ABC transporter permease protein
[Streptococcus thermophilus LMD-9]
Length = 259
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 99/244 (40%), Positives = 155/244 (63%), Gaps = 2/244 (0%)
Query: 11 RKTSFIIFILAMIFFYLPLIVLVIYSFNDGKGM-VWNGFSLRWYKELFKHSNNIWKAFYY 69
+K + + L + YLP+ L+ +SFN G M + GF+L Y+ +F S +
Sbjct: 2 KKFANLYLALVFVIIYLPIFYLIAFSFNSGGDMNSFTGFTLDNYQSMFSDSR-LMLILAQ 60
Query: 70 SIFIALISSLVSTIIGTFGAIALKWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATL 129
+ F+A +S+L++TIIGTFG+I + K + + +++ + +V PD++IG S LI+F +
Sbjct: 61 TFFLAFLSALLATIIGTFGSIFIYESKQKQQTGILSLNNVLMVAPDVMIGASFLILFTWI 120
Query: 130 KFKLGIITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
F+LG +++ ++H F+IP V+ +VL RL E + +V AAYDLGAT Q L +V++P L
Sbjct: 121 GFQLGFVSVLLSHIAFSIPIVVLMVLPRLKEMNRDMVNAAYDLGATQWQMLREVMLPYLT 180
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIVISI 249
P II+ + MA T S DDF +TFFV+G G STL + IYS R G+S +NALS ++ + SI
Sbjct: 181 PGIIAGYFMAFTYSLDDFAVTFFVTGNGFSTLAVEIYSRARKGISLEINALSTVVFLFSI 240
Query: 250 LLTL 253
LL +
Sbjct: 241 LLVI 244
>gi|21243203|ref|NP_642785.1| putrescine transport protein [Xanthomonas axonopodis pv. citri str.
306]
gi|21108730|gb|AAM37321.1| putrescine transport protein [Xanthomonas axonopodis pv. citri str.
306]
Length = 282
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 93/237 (39%), Positives = 154/237 (64%), Gaps = 8/237 (3%)
Query: 17 IFILAMIFFYLPLIVLVIYSFNDGK-GMVWNGFSLRWYKELFKHSNNIWKAFYYSIFIAL 75
+ L F YLP+++L++YSFN + VW GFS RWY EL + + A + S+ +A
Sbjct: 15 VLALGFGFLYLPILLLMVYSFNASRLATVWGGFSARWYGELVR-DRQLLDAAWVSLEVAF 73
Query: 76 ISSLVSTIIGTFGAIAL-KWFDFKGKKYLKNMSVLPLVVPDIIIGVSLLIMFATLKFKLG 134
++ ST++GT A+A+ + F GK + PLV+P++IIG+S+L++ ++ LG
Sbjct: 74 WTACASTVLGTMAAMAMVRMRRFPGKTLFGALITAPLVMPEVIIGLSILLLLVSMGGVLG 133
Query: 135 I-----ITIFIAHTTFNIPYVLFIVLSRLDEFDYSIVEAAYDLGATNRQTLTKVIIPMLL 189
I + I++AH TF + +V ++ SRL E D S+ EAA DLGAT + ++ +P++
Sbjct: 134 IAPRGAVAIWVAHVTFTVSFVTVVISSRLQELDRSLEEAAMDLGATPLKVFFQITLPIIA 193
Query: 190 PAIISAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVILIV 246
PA+ S +L+A TLS DD VI F++GP S+TLP++++S +RLG+SP +NAL+ ++++
Sbjct: 194 PALASGWLLAFTLSLDDVVIASFLAGPSSTTLPIKVFSSVRLGISPKINALATLMVL 250
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.332 0.145 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 880,981,150
Number of Sequences: 5470121
Number of extensions: 35084988
Number of successful extensions: 181175
Number of sequences better than 1.0e-05: 500
Number of HSP's better than 0.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 2678
Number of HSP's that attempted gapping in prelim test: 174144
Number of HSP's gapped (non-prelim): 4852
length of query: 264
length of database: 1,894,087,724
effective HSP length: 130
effective length of query: 134
effective length of database: 1,182,971,994
effective search space: 158518247196
effective search space used: 158518247196
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 128 (53.9 bits)