BLASTP 2.2.4 [Aug-26-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= SAG0421
(1055 letters)
Database: nr
1,487,057 sequences; 479,114,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22536604|ref|NP_687455.1| cell wall surface anchor family pro... 1986 0.0
gi|25010529|ref|NP_734924.1| Unknown [Streptococcus agalactiae N... 1960 0.0
gi|19745918|ref|NP_607054.1| hypothetical protein [Streptococcus... 1399 0.0
gi|15674877|ref|NP_269051.1| hypothetical protein [Streptococcus... 1397 0.0
gi|28896197|ref|NP_802547.1| hypothetical protein [Streptococcus... 1395 0.0
gi|21910105|ref|NP_664373.1| putative surface antigen [Streptoco... 1381 0.0
gi|7522150|pir||T31094 surface antigen BspA - Bacteroides forsyt... 110 2e-22
gi|23380360|gb|AAN18285.1| immunoreactive protein Se110 [Strepto... 97 2e-18
gi|20093081|ref|NP_619156.1| cell surface protein [Methanosarcin... 89 5e-16
gi|23023870|ref|ZP_00063099.1| hypothetical protein [Leuconostoc... 82 5e-14
gi|23052573|ref|ZP_00079204.1| hypothetical protein [Methanosarc... 80 2e-13
gi|20093078|ref|NP_619153.1| cell surface protein [Methanosarcin... 80 3e-13
gi|23052569|ref|ZP_00079200.1| hypothetical protein [Methanosarc... 79 3e-13
gi|19703554|ref|NP_603116.1| Hypothetical cytosolic protein [Fus... 77 2e-12
gi|27886986|gb|EAA24104.1| Hypothetical Cytosolic Protein [Fusob... 75 7e-12
gi|20093074|ref|NP_619149.1| cell surface protein [Methanosarcin... 72 6e-11
gi|29347306|ref|NP_810809.1| putative cell surface antigen [Bact... 54 2e-05
gi|22090596|gb|AAM51159.1| putative surface protein [Trichomonas... 54 2e-05
gi|15639217|ref|NP_218665.1| leucine-rich repeat protein TpLRR [... 54 2e-05
gi|1914872|emb|CAB04758.1| PCPA [Streptococcus pneumoniae] 52 4e-05
>gi|22536604|ref|NP_687455.1| cell wall surface anchor family protein
[Streptococcus agalactiae 2603V/R]
gi|22533441|gb|AAM99327.1|AE014211_4 cell wall surface anchor family
protein [Streptococcus agalactiae 2603V/R]
Length = 1055
Score = 1986 bits (5146), Expect = 0.0
Identities = 1055/1055 (100%), Positives = 1055/1055 (100%)
Query: 1 MTKKHLKTLALALTTVSVVTYSQEVYGLEREESVKQEQTQSASEDDWFEEDNERKTNVSK 60
MTKKHLKTLALALTTVSVVTYSQEVYGLEREESVKQEQTQSASEDDWFEEDNERKTNVSK
Sbjct: 1 MTKKHLKTLALALTTVSVVTYSQEVYGLEREESVKQEQTQSASEDDWFEEDNERKTNVSK 60
Query: 61 ENSTVDETVSDLFSDGNSNNSSSKTESVVSDPKQVPKAKPEVTQEASNSSNDASKVEVPK 120
ENSTVDETVSDLFSDGNSNNSSSKTESVVSDPKQVPKAKPEVTQEASNSSNDASKVEVPK
Sbjct: 61 ENSTVDETVSDLFSDGNSNNSSSKTESVVSDPKQVPKAKPEVTQEASNSSNDASKVEVPK 120
Query: 121 QDTASKKETLETSTWEAKDFVTRGDTLVGFSKSGINKLSQTSHLVLPSHAADGTQLTQVA 180
QDTASKKETLETSTWEAKDFVTRGDTLVGFSKSGINKLSQTSHLVLPSHAADGTQLTQVA
Sbjct: 121 QDTASKKETLETSTWEAKDFVTRGDTLVGFSKSGINKLSQTSHLVLPSHAADGTQLTQVA 180
Query: 181 SFAFTPDKKTAIAEYTSRLGENGKPSRLDIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIG 240
SFAFTPDKKTAIAEYTSRLGENGKPSRLDIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIG
Sbjct: 181 SFAFTPDKKTAIAEYTSRLGENGKPSRLDIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIG 240
Query: 241 QDAFVDNKNIAEVNLPESLETISDYAFAHMSLKQVKLPDNLKVIGELAFFDNQIGGKLYL 300
QDAFVDNKNIAEVNLPESLETISDYAFAHMSLKQVKLPDNLKVIGELAFFDNQIGGKLYL
Sbjct: 241 QDAFVDNKNIAEVNLPESLETISDYAFAHMSLKQVKLPDNLKVIGELAFFDNQIGGKLYL 300
Query: 301 PRHLIKLAERAFKSNRIQTVEFLGSKLKVIGEASFQDNNLRNVMLPDGLEKIESEAFTGN 360
PRHLIKLAERAFKSNRIQTVEFLGSKLKVIGEASFQDNNLRNVMLPDGLEKIESEAFTGN
Sbjct: 301 PRHLIKLAERAFKSNRIQTVEFLGSKLKVIGEASFQDNNLRNVMLPDGLEKIESEAFTGN 360
Query: 361 PGDEHYNNQVVLRTRTGQNPHQLATENTYVNPDKSLWRATPDMDYTKWLEEDFTYQKNSV 420
PGDEHYNNQVVLRTRTGQNPHQLATENTYVNPDKSLWRATPDMDYTKWLEEDFTYQKNSV
Sbjct: 361 PGDEHYNNQVVLRTRTGQNPHQLATENTYVNPDKSLWRATPDMDYTKWLEEDFTYQKNSV 420
Query: 421 TGFSNKGLQKVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEEIKLPSTI 480
TGFSNKGLQKVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEEIKLPSTI
Sbjct: 421 TGFSNKGLQKVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEEIKLPSTI 480
Query: 481 RKIGAFAFQSNNLKSFEASEDLEEIKEGAFMNNRIGTLDLKDKLIKIGDAAFHINHIYAI 540
RKIGAFAFQSNNLKSFEASEDLEEIKEGAFMNNRIGTLDLKDKLIKIGDAAFHINHIYAI
Sbjct: 481 RKIGAFAFQSNNLKSFEASEDLEEIKEGAFMNNRIGTLDLKDKLIKIGDAAFHINHIYAI 540
Query: 541 VLPESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLSNKLESVNLSEQKQLKTIEVQA 600
VLPESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLSNKLESVNLSEQKQLKTIEVQA
Sbjct: 541 VLPESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLSNKLESVNLSEQKQLKTIEVQA 600
Query: 601 FSDNALSEVVLPPNLQTIREEAFKRNHLKEVKGSSTLSQITFNAFDQNDGDKRFGKKVVV 660
FSDNALSEVVLPPNLQTIREEAFKRNHLKEVKGSSTLSQITFNAFDQNDGDKRFGKKVVV
Sbjct: 601 FSDNALSEVVLPPNLQTIREEAFKRNHLKEVKGSSTLSQITFNAFDQNDGDKRFGKKVVV 660
Query: 661 RTHNNSHMLADGERFIIDPDKLSSTMVDLEKVLKIIEGLDYSTLRQTTQTQFREMTTAGK 720
RTHNNSHMLADGERFIIDPDKLSSTMVDLEKVLKIIEGLDYSTLRQTTQTQFREMTTAGK
Sbjct: 661 RTHNNSHMLADGERFIIDPDKLSSTMVDLEKVLKIIEGLDYSTLRQTTQTQFREMTTAGK 720
Query: 721 ALLSKSNLRQGEKQKFLQEAQFFLGRVDLDKAIAKAEKALVTKKATKNGHLLERSINKAV 780
ALLSKSNLRQGEKQKFLQEAQFFLGRVDLDKAIAKAEKALVTKKATKNGHLLERSINKAV
Sbjct: 721 ALLSKSNLRQGEKQKFLQEAQFFLGRVDLDKAIAKAEKALVTKKATKNGHLLERSINKAV 780
Query: 781 LAYNNSAIKKANVKRLEKELDLLTDLVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNV 840
LAYNNSAIKKANVKRLEKELDLLTDLVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNV
Sbjct: 781 LAYNNSAIKKANVKRLEKELDLLTDLVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNV 840
Query: 841 YFDKSGKLIYALDMSDTIGEGQKDAYGNPILNVDEDNEGYHTLAVATLADYEGLYIKDIL 900
YFDKSGKLIYALDMSDTIGEGQKDAYGNPILNVDEDNEGYHTLAVATLADYEGLYIKDIL
Sbjct: 841 YFDKSGKLIYALDMSDTIGEGQKDAYGNPILNVDEDNEGYHTLAVATLADYEGLYIKDIL 900
Query: 901 NSSLDKIKAIRQIPLAKYHRLGIFQAIRNAAAEADRLLPKTPKGYLNEVPNYRKKQVEKN 960
NSSLDKIKAIRQIPLAKYHRLGIFQAIRNAAAEADRLLPKTPKGYLNEVPNYRKKQVEKN
Sbjct: 901 NSSLDKIKAIRQIPLAKYHRLGIFQAIRNAAAEADRLLPKTPKGYLNEVPNYRKKQVEKN 960
Query: 961 LKPVDYKTPIFNKALPNEKVDGDRAAKGHNINAETNNSVAVTPIRSEQQLHKSQSDVNLP 1020
LKPVDYKTPIFNKALPNEKVDGDRAAKGHNINAETNNSVAVTPIRSEQQLHKSQSDVNLP
Sbjct: 961 LKPVDYKTPIFNKALPNEKVDGDRAAKGHNINAETNNSVAVTPIRSEQQLHKSQSDVNLP 1020
Query: 1021 QTSSKNNFIYEILGYVSLCLLFLVTAGKKGKRARK 1055
QTSSKNNFIYEILGYVSLCLLFLVTAGKKGKRARK
Sbjct: 1021 QTSSKNNFIYEILGYVSLCLLFLVTAGKKGKRARK 1055
>gi|25010529|ref|NP_734924.1| Unknown [Streptococcus agalactiae
NEM316]
gi|23094882|emb|CAD46100.1| Unknown [Streptococcus agalactiae NEM316]
Length = 1055
Score = 1960 bits (5077), Expect = 0.0
Identities = 1039/1055 (98%), Positives = 1045/1055 (98%)
Query: 1 MTKKHLKTLALALTTVSVVTYSQEVYGLEREESVKQEQTQSASEDDWFEEDNERKTNVSK 60
MTKKHLKTLALALTTVSVVTYSQEVYGLEREESVKQEQTQSASEDDWFEEDNERKTNVSK
Sbjct: 1 MTKKHLKTLALALTTVSVVTYSQEVYGLEREESVKQEQTQSASEDDWFEEDNERKTNVSK 60
Query: 61 ENSTVDETVSDLFSDGNSNNSSSKTESVVSDPKQVPKAKPEVTQEASNSSNDASKVEVPK 120
NSTVDETVSDLFSDGNSNNSSSKTESVVSDPKQVPKAKPEVTQEASNSSNDASKVEVPK
Sbjct: 61 GNSTVDETVSDLFSDGNSNNSSSKTESVVSDPKQVPKAKPEVTQEASNSSNDASKVEVPK 120
Query: 121 QDTASKKETLETSTWEAKDFVTRGDTLVGFSKSGINKLSQTSHLVLPSHAADGTQLTQVA 180
QDTASKKET+ETSTWEAKDFVTRGDTLVGFSKSGINKLSQTSHLVLPSHAADGTQLTQVA
Sbjct: 121 QDTASKKETIETSTWEAKDFVTRGDTLVGFSKSGINKLSQTSHLVLPSHAADGTQLTQVA 180
Query: 181 SFAFTPDKKTAIAEYTSRLGENGKPSRLDIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIG 240
SFAFTPDKKTAIAEYTSRLGENGKPSRLDIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIG
Sbjct: 181 SFAFTPDKKTAIAEYTSRLGENGKPSRLDIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIG 240
Query: 241 QDAFVDNKNIAEVNLPESLETISDYAFAHMSLKQVKLPDNLKVIGELAFFDNQIGGKLYL 300
QDAFVDNKNIAEVNLPESLETISDYAFAHMSLKQVKLPDNLKVIGELAFFDNQIGGKLYL
Sbjct: 241 QDAFVDNKNIAEVNLPESLETISDYAFAHMSLKQVKLPDNLKVIGELAFFDNQIGGKLYL 300
Query: 301 PRHLIKLAERAFKSNRIQTVEFLGSKLKVIGEASFQDNNLRNVMLPDGLEKIESEAFTGN 360
PRHLIKLAERAFKSNRIQTVEFLGSKLKVIGEASFQDNNL NVMLPDGLEKIESEAFTGN
Sbjct: 301 PRHLIKLAERAFKSNRIQTVEFLGSKLKVIGEASFQDNNLSNVMLPDGLEKIESEAFTGN 360
Query: 361 PGDEHYNNQVVLRTRTGQNPHQLATENTYVNPDKSLWRATPDMDYTKWLEEDFTYQKNSV 420
PGDEHYNNQVVLRTRTGQNPHQLATENTYVNPDKSLWRATPDMDYTKWLEEDFTYQKNSV
Sbjct: 361 PGDEHYNNQVVLRTRTGQNPHQLATENTYVNPDKSLWRATPDMDYTKWLEEDFTYQKNSV 420
Query: 421 TGFSNKGLQKVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEEIKLPSTI 480
TGFSNKGLQKVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEE+KLPSTI
Sbjct: 421 TGFSNKGLQKVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEEVKLPSTI 480
Query: 481 RKIGAFAFQSNNLKSFEASEDLEEIKEGAFMNNRIGTLDLKDKLIKIGDAAFHINHIYAI 540
RKIGAFAFQSNNLKSFEASEDLEEIKEGAFMNNRIGTLDLKDKLIKIGDA+FHINHI+AI
Sbjct: 481 RKIGAFAFQSNNLKSFEASEDLEEIKEGAFMNNRIGTLDLKDKLIKIGDASFHINHIHAI 540
Query: 541 VLPESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLSNKLESVNLSEQKQLKTIEVQA 600
VLPESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLSNKLESVNLSEQKQLKTIEVQA
Sbjct: 541 VLPESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLSNKLESVNLSEQKQLKTIEVQA 600
Query: 601 FSDNALSEVVLPPNLQTIREEAFKRNHLKEVKGSSTLSQITFNAFDQNDGDKRFGKKVVV 660
FSDNALSEVVLPPNLQTIREEAFKRNHLKEVKGSSTLSQI FNAFDQNDGDKRFGKKVVV
Sbjct: 601 FSDNALSEVVLPPNLQTIREEAFKRNHLKEVKGSSTLSQIAFNAFDQNDGDKRFGKKVVV 660
Query: 661 RTHNNSHMLADGERFIIDPDKLSSTMVDLEKVLKIIEGLDYSTLRQTTQTQFREMTTAGK 720
RTHNNSHMLADGERFIIDPDKLSSTMVDLEKVLKIIEGLDYSTLRQTTQTQFREMTTAGK
Sbjct: 661 RTHNNSHMLADGERFIIDPDKLSSTMVDLEKVLKIIEGLDYSTLRQTTQTQFREMTTAGK 720
Query: 721 ALLSKSNLRQGEKQKFLQEAQFFLGRVDLDKAIAKAEKALVTKKATKNGHLLERSINKAV 780
ALLSKSNLRQGEKQKFLQEAQFFLGRVDLDKA AKAEKALVTKKATKNGHLLERSINKAV
Sbjct: 721 ALLSKSNLRQGEKQKFLQEAQFFLGRVDLDKATAKAEKALVTKKATKNGHLLERSINKAV 780
Query: 781 LAYNNSAIKKANVKRLEKELDLLTDLVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNV 840
LAYNNSAIKKANVKRLEKELDLLTDLVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNV
Sbjct: 781 LAYNNSAIKKANVKRLEKELDLLTDLVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNV 840
Query: 841 YFDKSGKLIYALDMSDTIGEGQKDAYGNPILNVDEDNEGYHTLAVATLADYEGLYIKDIL 900
YFDKSGKLIYALDMSDTIGEGQKDAYGNPILNVDEDNEGYH LAVATLADYEGLYIKDIL
Sbjct: 841 YFDKSGKLIYALDMSDTIGEGQKDAYGNPILNVDEDNEGYHALAVATLADYEGLYIKDIL 900
Query: 901 NSSLDKIKAIRQIPLAKYHRLGIFQAIRNAAAEADRLLPKTPKGYLNEVPNYRKKQVEKN 960
NSSLDKIKAIRQIPLAKYHRLG FQAIRNAAAEADRL+PKTPKGYLN VPNYRKKQVEKN
Sbjct: 901 NSSLDKIKAIRQIPLAKYHRLGFFQAIRNAAAEADRLIPKTPKGYLNTVPNYRKKQVEKN 960
Query: 961 LKPVDYKTPIFNKALPNEKVDGDRAAKGHNINAETNNSVAVTPIRSEQQLHKSQSDVNLP 1020
KPVDYKTPIF+KALPNEKVDGDR AKGHNINAETNN VAVTPIRSEQQLHKSQSDVNLP
Sbjct: 961 SKPVDYKTPIFDKALPNEKVDGDRVAKGHNINAETNNYVAVTPIRSEQQLHKSQSDVNLP 1020
Query: 1021 QTSSKNNFIYEILGYVSLCLLFLVTAGKKGKRARK 1055
QTSSKNNFIYEILGYVSLCLLFLVTAGKKGKRARK
Sbjct: 1021 QTSSKNNFIYEILGYVSLCLLFLVTAGKKGKRARK 1055
>gi|19745918|ref|NP_607054.1| hypothetical protein [Streptococcus
pyogenes MGAS8232]
gi|19748073|gb|AAL97553.1| hypothetical protein [Streptococcus
pyogenes MGAS8232]
Length = 1008
Score = 1399 bits (3622), Expect = 0.0
Identities = 754/1050 (71%), Positives = 860/1050 (81%), Gaps = 45/1050 (4%)
Query: 3 KKHLKTLALALTTVSVVTYSQEVYGLEREESVKQEQTQSA-SEDDWFEEDNERKTNVSKE 61
KKHLKT+AL LTTVSVVT++QEV+ L +E +KQ Q S+ S D+ E + K +++
Sbjct: 2 KKHLKTVALTLTTVSVVTHNQEVFSLVKEPILKQTQASSSISGADYAESSGKSKLKINET 61
Query: 62 NSTVDETVSDLFSDGNSNNSSSKTESVVSDPKQVPKAKPEVTQEASNSSNDASKVEVPKQ 121
+ VD+TV+DLFSD + K +Q KA E T E+ N S++E K+
Sbjct: 62 SGPVDDTVTDLFSDKRTTPEKIKDNLAKGPREQELKAVTENT-ESEKQINSGSQLEQSKE 120
Query: 122 DTASKKETLETSTWEAKDFVTRGDTLVGFSKSGINKLSQTSHLVLPSHAADGTQLTQVAS 181
+ K TS WE DF+T+G+TLVG SKSG+ KLSQT HLVLPS AADGTQL QVAS
Sbjct: 121 SLSLNKRVPSTSNWEICDFITKGNTLVGLSKSGVEKLSQTDHLVLPSQAADGTQLIQVAS 180
Query: 182 FAFTPDKKTAIAEYTSRLGENGKPSRLDIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIGQ 241
FAFTPDKKTAIAEYTSR GENG+ S+LD+D KEII+EGE+FN+Y L K+TIP GYK IGQ
Sbjct: 181 FAFTPDKKTAIAEYTSRAGENGEISQLDVDGKEIINEGEVFNSYLLKKVTIPTGYKHIGQ 240
Query: 242 DAFVDNKNIAEVNLPESLETISDYAFAHMSLKQVKLPDNLKVIGELAFFDNQIGGKLYLP 301
DAFVDNKNIAEVNLPESLETISDYAFAH++LKQ+ LPDNLK IGELAFFDNQI GKL LP
Sbjct: 241 DAFVDNKNIAEVNLPESLETISDYAFAHLALKQIDLPDNLKAIGELAFFDNQITGKLSLP 300
Query: 302 RHLIKLAERAFKSNRIQTVEFLGSKLKVIGEASFQDNNLRNVMLPDGLEKIESEAFTGNP 361
R L++LAERAFKSN I+T+EF G+ LKVIGEASFQDN+L +MLPDGLEKIESEAFTGNP
Sbjct: 301 RQLMRLAERAFKSNHIKTIEFRGNSLKVIGEASFQDNDLSQLMLPDGLEKIESEAFTGNP 360
Query: 362 GDEHYNNQVVLRTRTGQNPHQLATENTYVNPDKSLWRATPDMDYTKWLEEDFTYQKNSVT 421
GD+HYNN+VVL T++G+NP+ LATENTYVNPDKSLW+ +P++DYTKWLEEDFTYQKNSVT
Sbjct: 361 GDDHYNNRVVLWTKSGKNPYGLATENTYVNPDKSLWQESPEIDYTKWLEEDFTYQKNSVT 420
Query: 422 GFSNKGLQKVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEEIKLPSTIR 481
GFS+KGLQKV+RNKNLEIPKQHNG+TITEIGDNAFRNVDFQ+KTLRKYDLEE+KLPSTIR
Sbjct: 421 GFSSKGLQKVKRNKNLEIPKQHNGVTITEIGDNAFRNVDFQNKTLRKYDLEEVKLPSTIR 480
Query: 482 KIGAFAFQSNNLKSFEASEDLEEIKEGAFMNNRIGTLDLKDKLIKIGDAAFHINHIYAIV 541
KIGAFAFQSNNLKSFEAS+DLEEIKEGAFMNNRI TL+LKDKL+ IGDAAFHINHIYAIV
Sbjct: 481 KIGAFAFQSNNLKSFEASDDLEEIKEGAFMNNRIETLELKDKLVTIGDAAFHINHIYAIV 540
Query: 542 LPESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLSNKLESVNLSEQKQLKTIEVQAF 601
LPESVQEIGRSAFRQNGA +L+F+G+KVKT+GEMAFLSN+LE ++LSEQKQL I VQAF
Sbjct: 541 LPESVQEIGRSAFRQNGANNLIFMGSKVKTLGEMAFLSNRLEHLDLSEQKQLTEIPVQAF 600
Query: 602 SDNALSEVVLPPNLQTIREEAFKRNHLKEVKGSSTLSQITFNAFDQNDGDKRFGKKVVVR 661
SDNAL EV+LP +L+TIREEAFK+NHLK+++ +S LS I FNA D NDGD++F KVVV+
Sbjct: 601 SDNALKEVLLPASLKTIREEAFKKNHLKQLEVASALSHIAFNALDDNDGDEQFDNKVVVK 660
Query: 662 THNNSHMLADGERFIIDPDKLSSTMVDLEKVLKIIEGLDYSTLRQTTQTQFREMTTAGKA 721
TH+NS+ LADGE FI+DPDKLSST+VDLEK+LK+IEGLDYSTLRQTTQTQFR+MTTAGKA
Sbjct: 661 THHNSYALADGEHFIVDPDKLSSTIVDLEKILKLIEGLDYSTLRQTTQTQFRDMTTAGKA 720
Query: 722 LLSKSNLRQGEKQKFLQEAQFFLGRVDLDKAIAKAEKALVTKKATKNGHLLERSINKAVL 781
LLSKSNLRQGEKQKFLQEAQFFLGRVDLDKAIAKAEKALVTKKATKNG LLERSINKAVL
Sbjct: 721 LLSKSNLRQGEKQKFLQEAQFFLGRVDLDKAIAKAEKALVTKKATKNGQLLERSINKAVL 780
Query: 782 AYNNSAIKKANVKRLEKELDLLTDLVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNVY 841
AYNNSAIKKANVKRLEKELDLLT LVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNVY
Sbjct: 781 AYNNSAIKKANVKRLEKELDLLTGLVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNVY 840
Query: 842 FDKSGKLIYALDMSDTIGEGQKDAYGNPILNVDEDNEGYHTLAVATLADYEGLYIKDILN 901
FDKSGKLIYALDMSDTIGEGQKDAYGNPILNVDEDNEGYH LAVATLADYEGL IK ILN
Sbjct: 841 FDKSGKLIYALDMSDTIGEGQKDAYGNPILNVDEDNEGYHALAVATLADYEGLDIKTILN 900
Query: 902 SSLDKIKAIRQIPLAKYHRLGIFQAIRNAAAEADRLLPKTPKGYLNEVPNYRKKQVEKNL 961
S L ++ +IRQ+P A YHR GIFQAI+NAAAEA++LLPK
Sbjct: 901 SKLSQLTSIRQVPTAAYHRAGIFQAIQNAAAEAEQLLPK--------------------- 939
Query: 962 KPVDYKTPIFNKALPNEKVDGDRAAKGHNINAETNNSVAVTPIRSEQQLHKSQSDVNLPQ 1021
P + + + +G N +TN + + LP+
Sbjct: 940 -------PGTHSEKSSSSESANSKDRGLQSNPKTN---------------RGRHSAILPR 977
Query: 1022 TSSKNNFIYEILGYVSLCLLFLVTAGKKGK 1051
T SK +F+Y ILGY S+ LL L+TA KK K
Sbjct: 978 TGSKGSFVYGILGYTSVALLSLITAIKKKK 1007
>gi|15674877|ref|NP_269051.1| hypothetical protein [Streptococcus
pyogenes]
gi|13622014|gb|AAK33772.1| hypothetical protein [Streptococcus
pyogenes M1 GAS]
Length = 1008
Score = 1397 bits (3615), Expect = 0.0
Identities = 754/1050 (71%), Positives = 858/1050 (80%), Gaps = 45/1050 (4%)
Query: 3 KKHLKTLALALTTVSVVTYSQEVYGLEREESVKQEQTQSA-SEDDWFEEDNERKTNVSKE 61
KKHLKT+AL LTTVSVVT++QEV+ L +E +KQ Q S+ S D+ E + K +++
Sbjct: 2 KKHLKTVALTLTTVSVVTHNQEVFSLVKEPILKQTQASSSISGADYAESSGKSKLKINET 61
Query: 62 NSTVDETVSDLFSDGNSNNSSSKTESVVSDPKQVPKAKPEVTQEASNSSNDASKVEVPKQ 121
+ VD+TV+DLFSD + K +Q KA E T E+ S++E K+
Sbjct: 62 SGPVDDTVTDLFSDKRTTPEKIKDNLAKGPREQELKAVTENT-ESEKQITSGSQLEQSKE 120
Query: 122 DTASKKETLETSTWEAKDFVTRGDTLVGFSKSGINKLSQTSHLVLPSHAADGTQLTQVAS 181
+ K TS WE DF+T+G+TLVG SKSG+ KLSQT HLVLPS AADGTQL QVAS
Sbjct: 121 SLSLNKTVPSTSNWEICDFITKGNTLVGLSKSGVEKLSQTDHLVLPSQAADGTQLIQVAS 180
Query: 182 FAFTPDKKTAIAEYTSRLGENGKPSRLDIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIGQ 241
FAFTPDKKTAIAEYTSR GENG+ S+LD+D KEII+EGE+FN+Y L K+TIP GYK IGQ
Sbjct: 181 FAFTPDKKTAIAEYTSRAGENGEISQLDVDGKEIINEGEVFNSYLLKKVTIPTGYKHIGQ 240
Query: 242 DAFVDNKNIAEVNLPESLETISDYAFAHMSLKQVKLPDNLKVIGELAFFDNQIGGKLYLP 301
DAFVDNKNIAEVNLPESLETISDYAFAH++LKQ+ LPDNLK IGELAFFDNQI GKL LP
Sbjct: 241 DAFVDNKNIAEVNLPESLETISDYAFAHLALKQIDLPDNLKAIGELAFFDNQITGKLSLP 300
Query: 302 RHLIKLAERAFKSNRIQTVEFLGSKLKVIGEASFQDNNLRNVMLPDGLEKIESEAFTGNP 361
R L++LAERAFKSN I+T+EF G+ LKVIGEASFQDN+L +MLPDGLEKIESEAFTGNP
Sbjct: 301 RQLMRLAERAFKSNHIKTIEFRGNSLKVIGEASFQDNDLSQLMLPDGLEKIESEAFTGNP 360
Query: 362 GDEHYNNQVVLRTRTGQNPHQLATENTYVNPDKSLWRATPDMDYTKWLEEDFTYQKNSVT 421
GD+HYNN+VVL T++G+NP LATENTYVNPDKSLW+ +P++DYTKWLEEDFTYQKNSVT
Sbjct: 361 GDDHYNNRVVLWTKSGKNPSGLATENTYVNPDKSLWQESPEIDYTKWLEEDFTYQKNSVT 420
Query: 422 GFSNKGLQKVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEEIKLPSTIR 481
GFSNKGLQKV+RNKNLEIPKQHNG+TITEIGDNAFRNVDFQ+KTLRKYDLEE+KLPSTIR
Sbjct: 421 GFSNKGLQKVKRNKNLEIPKQHNGVTITEIGDNAFRNVDFQNKTLRKYDLEEVKLPSTIR 480
Query: 482 KIGAFAFQSNNLKSFEASEDLEEIKEGAFMNNRIGTLDLKDKLIKIGDAAFHINHIYAIV 541
KIGAFAFQSNNLKSFEAS+DLEEIKEGAFMNNRI TL+LKDKL+ IGDAAFHINHIYAIV
Sbjct: 481 KIGAFAFQSNNLKSFEASDDLEEIKEGAFMNNRIETLELKDKLVTIGDAAFHINHIYAIV 540
Query: 542 LPESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLSNKLESVNLSEQKQLKTIEVQAF 601
LPESVQEIGRSAFRQNGA +L+F+G+KVKT+GEMAFLSN+LE ++LSEQKQL I VQAF
Sbjct: 541 LPESVQEIGRSAFRQNGANNLIFMGSKVKTLGEMAFLSNRLEHLDLSEQKQLTEIPVQAF 600
Query: 602 SDNALSEVVLPPNLQTIREEAFKRNHLKEVKGSSTLSQITFNAFDQNDGDKRFGKKVVVR 661
SDNAL EV+LP +L+TIREEAFK+NHLK+++ +S LS I FNA D NDGD++F KVVV+
Sbjct: 601 SDNALKEVLLPASLKTIREEAFKKNHLKQLEVASALSHIAFNALDDNDGDEQFDNKVVVK 660
Query: 662 THNNSHMLADGERFIIDPDKLSSTMVDLEKVLKIIEGLDYSTLRQTTQTQFREMTTAGKA 721
TH+NS+ LADGE FI+DPDKLSST+VDLEK+LK+IEGLDYSTLRQTTQTQFR+MTTAGKA
Sbjct: 661 THHNSYALADGEHFIVDPDKLSSTIVDLEKILKLIEGLDYSTLRQTTQTQFRDMTTAGKA 720
Query: 722 LLSKSNLRQGEKQKFLQEAQFFLGRVDLDKAIAKAEKALVTKKATKNGHLLERSINKAVL 781
LLSKSNLRQGEKQKFLQEAQFFLGRVDLDKAIAKAEKALVTKKATKNG LLERSINKAVL
Sbjct: 721 LLSKSNLRQGEKQKFLQEAQFFLGRVDLDKAIAKAEKALVTKKATKNGQLLERSINKAVL 780
Query: 782 AYNNSAIKKANVKRLEKELDLLTDLVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNVY 841
AYNNSAIKKANVKRLEKELDLLT LVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNVY
Sbjct: 781 AYNNSAIKKANVKRLEKELDLLTGLVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNVY 840
Query: 842 FDKSGKLIYALDMSDTIGEGQKDAYGNPILNVDEDNEGYHTLAVATLADYEGLYIKDILN 901
FDKSGKLIYALDMSDTIGEGQKDAYGNPILNVDEDNEGYH LAVATLADYEGL IK ILN
Sbjct: 841 FDKSGKLIYALDMSDTIGEGQKDAYGNPILNVDEDNEGYHALAVATLADYEGLDIKTILN 900
Query: 902 SSLDKIKAIRQIPLAKYHRLGIFQAIRNAAAEADRLLPKTPKGYLNEVPNYRKKQVEKNL 961
S L ++ +IRQ+P A YHR GIFQAI+NAAAEA++LLPK
Sbjct: 901 SKLSQLTSIRQVPTAAYHRAGIFQAIQNAAAEAEQLLPK--------------------- 939
Query: 962 KPVDYKTPIFNKALPNEKVDGDRAAKGHNINAETNNSVAVTPIRSEQQLHKSQSDVNLPQ 1021
P + + + +G N +TN + + LP+
Sbjct: 940 -------PGTHSEKSSSSESANSKDRGLQSNPKTN---------------RGRHSAILPR 977
Query: 1022 TSSKNNFIYEILGYVSLCLLFLVTAGKKGK 1051
T SK +F+Y ILGY S+ LL L+TA KK K
Sbjct: 978 TGSKGSFVYGILGYTSVALLSLITAIKKKK 1007
>gi|28896197|ref|NP_802547.1| hypothetical protein [Streptococcus
pyogenes SSI-1]
gi|28811448|dbj|BAC64380.1| hypothetical protein [Streptococcus
pyogenes SSI-1]
Length = 1008
Score = 1395 bits (3610), Expect = 0.0
Identities = 752/1050 (71%), Positives = 856/1050 (80%), Gaps = 45/1050 (4%)
Query: 3 KKHLKTLALALTTVSVVTYSQEVYGLEREESVKQEQTQSA-SEDDWFEEDNERKTNVSKE 61
KKHLKT+AL LTTVSVVT++QEV+ L +E +KQ Q S+ S D+ E + K +++
Sbjct: 2 KKHLKTVALTLTTVSVVTHNQEVFSLVKEPILKQTQASSSISGADYAESSGKSKLKINET 61
Query: 62 NSTVDETVSDLFSDGNSNNSSSKTESVVSDPKQVPKAKPEVTQEASNSSNDASKVEVPKQ 121
+ VD+TV+DLFSD + K +Q KA E T E+ S++E K+
Sbjct: 62 SGPVDDTVTDLFSDKRTTPEKIKDNLAKGPREQELKAVTENT-ESEKQITSGSQLEQSKE 120
Query: 122 DTASKKETLETSTWEAKDFVTRGDTLVGFSKSGINKLSQTSHLVLPSHAADGTQLTQVAS 181
+ K TS WE DF+T+G+TLVG SKSG+ KLSQT HLVLPS AADGTQL QVAS
Sbjct: 121 SLSLNKRVPSTSNWEICDFITKGNTLVGLSKSGVEKLSQTDHLVLPSQAADGTQLIQVAS 180
Query: 182 FAFTPDKKTAIAEYTSRLGENGKPSRLDIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIGQ 241
FAFTPDKKTAIAEYTSR GENG+ S+LD+D KEII+EGE+FN+Y L K+TIP GYK IGQ
Sbjct: 181 FAFTPDKKTAIAEYTSRAGENGEISQLDVDGKEIINEGEVFNSYLLKKVTIPTGYKHIGQ 240
Query: 242 DAFVDNKNIAEVNLPESLETISDYAFAHMSLKQVKLPDNLKVIGELAFFDNQIGGKLYLP 301
DAFVDNKNIAEVNLPESLETISDYAFAH++LKQ+ LPDNLK IGELAFFDNQI GKL LP
Sbjct: 241 DAFVDNKNIAEVNLPESLETISDYAFAHLALKQIDLPDNLKAIGELAFFDNQITGKLSLP 300
Query: 302 RHLIKLAERAFKSNRIQTVEFLGSKLKVIGEASFQDNNLRNVMLPDGLEKIESEAFTGNP 361
R L++LAERAFKSN I+T+EF G+ LKVIGEASFQDN+L +MLPDGLEKIESEAFTGNP
Sbjct: 301 RQLMRLAERAFKSNHIKTIEFRGNSLKVIGEASFQDNDLSQLMLPDGLEKIESEAFTGNP 360
Query: 362 GDEHYNNQVVLRTRTGQNPHQLATENTYVNPDKSLWRATPDMDYTKWLEEDFTYQKNSVT 421
GD+HYNN+VVL T++G+NP+ LATENTYVNPDKSLW+ +P++DYTKWLEEDFTYQKNSVT
Sbjct: 361 GDDHYNNRVVLWTKSGKNPYGLATENTYVNPDKSLWQESPEIDYTKWLEEDFTYQKNSVT 420
Query: 422 GFSNKGLQKVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEEIKLPSTIR 481
GFS+KGLQKV+RNKNLEIPKQHNG+TITEIGDNAFRNVDFQ+KTLRKYDLEE+KLPSTIR
Sbjct: 421 GFSSKGLQKVKRNKNLEIPKQHNGVTITEIGDNAFRNVDFQNKTLRKYDLEEVKLPSTIR 480
Query: 482 KIGAFAFQSNNLKSFEASEDLEEIKEGAFMNNRIGTLDLKDKLIKIGDAAFHINHIYAIV 541
KIGAFAFQSNNLKSFEAS+DLEEIKEGAFMNNRI TL+LKDKL+ IGDAAFHINHIYAIV
Sbjct: 481 KIGAFAFQSNNLKSFEASDDLEEIKEGAFMNNRIETLELKDKLVTIGDAAFHINHIYAIV 540
Query: 542 LPESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLSNKLESVNLSEQKQLKTIEVQAF 601
LPESVQEIGRSAFRQNGA +L+F+G+KVKTIGEMAFLSN+LE ++LSEQKQL I VQAF
Sbjct: 541 LPESVQEIGRSAFRQNGANNLIFMGSKVKTIGEMAFLSNRLEHLDLSEQKQLTEIPVQAF 600
Query: 602 SDNALSEVVLPPNLQTIREEAFKRNHLKEVKGSSTLSQITFNAFDQNDGDKRFGKKVVVR 661
SDNAL EV+LP +L+TIREEAFK+NHLK+++ +S LS I FNA D NDGD++F KVVV+
Sbjct: 601 SDNALKEVLLPASLKTIREEAFKKNHLKQLEVASALSHIAFNALDDNDGDEQFDNKVVVK 660
Query: 662 THNNSHMLADGERFIIDPDKLSSTMVDLEKVLKIIEGLDYSTLRQTTQTQFREMTTAGKA 721
TH+NS+ LADGE FI+DPDKLSSTMVDLEK+LK+IEGLDYSTLRQTTQTQFR+MTTAGKA
Sbjct: 661 THHNSYALADGEHFIVDPDKLSSTMVDLEKILKLIEGLDYSTLRQTTQTQFRDMTTAGKA 720
Query: 722 LLSKSNLRQGEKQKFLQEAQFFLGRVDLDKAIAKAEKALVTKKATKNGHLLERSINKAVL 781
LLSKS LRQGEKQKFLQEAQFFLGRVDLDKAIAKAEKALVTKKATKNG LL RSINKAVL
Sbjct: 721 LLSKSKLRQGEKQKFLQEAQFFLGRVDLDKAIAKAEKALVTKKATKNGQLLGRSINKAVL 780
Query: 782 AYNNSAIKKANVKRLEKELDLLTDLVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNVY 841
AYNNSAIKKANVKRLEKELDLLT LVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNVY
Sbjct: 781 AYNNSAIKKANVKRLEKELDLLTGLVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNVY 840
Query: 842 FDKSGKLIYALDMSDTIGEGQKDAYGNPILNVDEDNEGYHTLAVATLADYEGLYIKDILN 901
FDKSGKLIYALDMSDTIGEGQKDAYGNPILNVDEDNEGYH LAVATLADYEGL IK ILN
Sbjct: 841 FDKSGKLIYALDMSDTIGEGQKDAYGNPILNVDEDNEGYHALAVATLADYEGLDIKTILN 900
Query: 902 SSLDKIKAIRQIPLAKYHRLGIFQAIRNAAAEADRLLPKTPKGYLNEVPNYRKKQVEKNL 961
S L ++ +IRQ+P A YHR GIFQAI+NAAAEA++LLPK
Sbjct: 901 SKLSQLTSIRQVPTAAYHRAGIFQAIQNAAAEAEQLLPK--------------------- 939
Query: 962 KPVDYKTPIFNKALPNEKVDGDRAAKGHNINAETNNSVAVTPIRSEQQLHKSQSDVNLPQ 1021
P + + + +G N +TN + + LP+
Sbjct: 940 -------PGTHSEKSSSSESANSKDRGLQSNPKTN---------------RGRHSAILPR 977
Query: 1022 TSSKNNFIYEILGYVSLCLLFLVTAGKKGK 1051
T SK +F+Y ILGY S+ LL L+ A KK K
Sbjct: 978 TGSKGSFVYGILGYTSVALLSLIAAIKKKK 1007
>gi|21910105|ref|NP_664373.1| putative surface antigen [Streptococcus
pyogenes MGAS315]
gi|21904297|gb|AAM79176.1| putative surface antigen [Streptococcus
pyogenes MGAS315]
Length = 999
Score = 1381 bits (3575), Expect = 0.0
Identities = 744/1042 (71%), Positives = 848/1042 (80%), Gaps = 45/1042 (4%)
Query: 11 LALTTVSVVTYSQEVYGLEREESVKQEQTQSA-SEDDWFEEDNERKTNVSKENSTVDETV 69
+ LTTVSVVT++QEV+ L +E +KQ Q S+ S D+ E + K +++ + VD+TV
Sbjct: 1 MTLTTVSVVTHNQEVFSLVKEPILKQTQASSSISGADYAESSGKSKLKINETSGPVDDTV 60
Query: 70 SDLFSDGNSNNSSSKTESVVSDPKQVPKAKPEVTQEASNSSNDASKVEVPKQDTASKKET 129
+DLFSD + K +Q KA E T E+ S++E K+ + K
Sbjct: 61 TDLFSDKRTTPEKIKDNLAKGPREQELKAVTENT-ESEKQITSGSQLEQSKESLSLNKRV 119
Query: 130 LETSTWEAKDFVTRGDTLVGFSKSGINKLSQTSHLVLPSHAADGTQLTQVASFAFTPDKK 189
TS WE DF+T+G+TLVG SKSG+ KLSQT HLVLPS AADGTQL QVASFAFTPDKK
Sbjct: 120 PSTSNWEICDFITKGNTLVGLSKSGVEKLSQTDHLVLPSQAADGTQLIQVASFAFTPDKK 179
Query: 190 TAIAEYTSRLGENGKPSRLDIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIGQDAFVDNKN 249
TAIAEYTSR GENG+ S+LD+D KEII+EGE+FN+Y L K+TIP GYK IGQDAFVDNKN
Sbjct: 180 TAIAEYTSRAGENGEISQLDVDGKEIINEGEVFNSYLLKKVTIPTGYKHIGQDAFVDNKN 239
Query: 250 IAEVNLPESLETISDYAFAHMSLKQVKLPDNLKVIGELAFFDNQIGGKLYLPRHLIKLAE 309
IAEVNLPESLETISDYAFAH++LKQ+ LPDNLK IGELAFFDNQI GKL LPR L++LAE
Sbjct: 240 IAEVNLPESLETISDYAFAHLALKQIDLPDNLKAIGELAFFDNQITGKLSLPRQLMRLAE 299
Query: 310 RAFKSNRIQTVEFLGSKLKVIGEASFQDNNLRNVMLPDGLEKIESEAFTGNPGDEHYNNQ 369
RAFKSN I+T+EF G+ LKVIGEASFQDN+L +MLPDGLEKIESEAFTGNPGD+HYNN+
Sbjct: 300 RAFKSNHIKTIEFRGNSLKVIGEASFQDNDLSQLMLPDGLEKIESEAFTGNPGDDHYNNR 359
Query: 370 VVLRTRTGQNPHQLATENTYVNPDKSLWRATPDMDYTKWLEEDFTYQKNSVTGFSNKGLQ 429
VVL T++G+NP+ LATENTYVNPDKSLW+ +P++DYTKWLEEDFTYQKNSVTGFS+KGLQ
Sbjct: 360 VVLWTKSGKNPYGLATENTYVNPDKSLWQESPEIDYTKWLEEDFTYQKNSVTGFSSKGLQ 419
Query: 430 KVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEEIKLPSTIRKIGAFAFQ 489
KV+RNKNLEIPKQHNG+TITEIGDNAFRNVDFQ+KTLRKYDLEE+KLPSTIRKIGAFAFQ
Sbjct: 420 KVKRNKNLEIPKQHNGVTITEIGDNAFRNVDFQNKTLRKYDLEEVKLPSTIRKIGAFAFQ 479
Query: 490 SNNLKSFEASEDLEEIKEGAFMNNRIGTLDLKDKLIKIGDAAFHINHIYAIVLPESVQEI 549
SNNLKSFEAS+DLEEIKEGAFMNNRI TL+LKDKL+ IGDAAFHINHIYAIVLPESVQEI
Sbjct: 480 SNNLKSFEASDDLEEIKEGAFMNNRIETLELKDKLVTIGDAAFHINHIYAIVLPESVQEI 539
Query: 550 GRSAFRQNGALHLMFIGNKVKTIGEMAFLSNKLESVNLSEQKQLKTIEVQAFSDNALSEV 609
GRSAFRQNGA +L+F+G+KVKTIGEMAFLSN+LE ++LSEQKQL I VQAFSDNAL EV
Sbjct: 540 GRSAFRQNGANNLIFMGSKVKTIGEMAFLSNRLEHLDLSEQKQLTEIPVQAFSDNALKEV 599
Query: 610 VLPPNLQTIREEAFKRNHLKEVKGSSTLSQITFNAFDQNDGDKRFGKKVVVRTHNNSHML 669
+LP +L+TIREEAFK+NHLK+++ +S LS I FNA D NDGD++F KVVV+TH+NS+ L
Sbjct: 600 LLPASLKTIREEAFKKNHLKQLEVASALSHIAFNALDDNDGDEQFDNKVVVKTHHNSYAL 659
Query: 670 ADGERFIIDPDKLSSTMVDLEKVLKIIEGLDYSTLRQTTQTQFREMTTAGKALLSKSNLR 729
ADGE FI+DPDKLSSTMVDLEK+LK+IEGLDYSTLRQTTQTQFR+MTTAGKALLSKS LR
Sbjct: 660 ADGEHFIVDPDKLSSTMVDLEKILKLIEGLDYSTLRQTTQTQFRDMTTAGKALLSKSKLR 719
Query: 730 QGEKQKFLQEAQFFLGRVDLDKAIAKAEKALVTKKATKNGHLLERSINKAVLAYNNSAIK 789
QGEKQKFLQEAQFFLGRVDLDKAIAKAEKALVTKKATKNG LL RSINKAVLAYNNSAIK
Sbjct: 720 QGEKQKFLQEAQFFLGRVDLDKAIAKAEKALVTKKATKNGQLLGRSINKAVLAYNNSAIK 779
Query: 790 KANVKRLEKELDLLTDLVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNVYFDKSGKLI 849
KANVKRLEKELDLLT LVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNVYFDKSGKLI
Sbjct: 780 KANVKRLEKELDLLTGLVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNVYFDKSGKLI 839
Query: 850 YALDMSDTIGEGQKDAYGNPILNVDEDNEGYHTLAVATLADYEGLYIKDILNSSLDKIKA 909
YALDMSDTIGEGQKDAYGNPILNVDEDNEGYH LAVATLADYEGL IK ILNS L ++ +
Sbjct: 840 YALDMSDTIGEGQKDAYGNPILNVDEDNEGYHALAVATLADYEGLDIKTILNSKLSQLTS 899
Query: 910 IRQIPLAKYHRLGIFQAIRNAAAEADRLLPKTPKGYLNEVPNYRKKQVEKNLKPVDYKTP 969
IRQ+P A YHR GIFQAI+NAAAEA++LLPK P
Sbjct: 900 IRQVPTAAYHRAGIFQAIQNAAAEAEQLLPK----------------------------P 931
Query: 970 IFNKALPNEKVDGDRAAKGHNINAETNNSVAVTPIRSEQQLHKSQSDVNLPQTSSKNNFI 1029
+ + + +G N +TN + + LP+T SK +F+
Sbjct: 932 GTHSEKSSSSESANSKDRGLQSNPKTN---------------RGRHSAILPRTGSKGSFV 976
Query: 1030 YEILGYVSLCLLFLVTAGKKGK 1051
Y ILGY S+ LL L+ A KK K
Sbjct: 977 YGILGYTSVALLSLIAAIKKKK 998
>gi|7522150|pir||T31094 surface antigen BspA - Bacteroides forsythus
gi|3005673|gb|AAC82625.1| surface antigen BspA [Bacteroides
forsythus]
Length = 1081
Score = 110 bits (274), Expect = 2e-22
Identities = 143/566 (25%), Positives = 243/566 (42%), Gaps = 52/566 (9%)
Query: 95 VPKAKPEVTQEASNSSNDASKVEVPKQDTASKKETLETSTWEAKDFVTRGDTLVG----F 150
+P + + + A + + +P TA + L T + T +G F
Sbjct: 120 IPNSVTTIGEWAFKGCSGLKSITLPNSLTAIGQSALSGCTGLTSITIPNSVTTIGEWAFF 179
Query: 151 SKSGINKLSQTSHLVLPSHAA--DGTQLTQVASFAFTPDKKTAIAEYTSRLGENGKPSRL 208
SG+ ++ + L +A LT + PD T I E + G +G S
Sbjct: 180 GCSGLTSITFPNSLTAIGESAFYGCGALTSIT----LPDALTTIGESAFK-GCSGLKSIT 234
Query: 209 DIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIGQDAFVDNKNIAEVNLPESLETISDYAFA 268
+ I E ++ LT +T+P+ +IG+ AF + + P SL TI + AF
Sbjct: 235 FPNSLTTIGESAFYDCGALTSITLPDALTTIGRSAFYGCSGLKSITFPNSLTTIGESAFY 294
Query: 269 HM-SLKQVKLPDNLKVIGELAFFDNQIGGKLYLPRHLIKLAERAFKSNRIQTVEFLGSKL 327
+ SL + +P+++ IG AF+ + LP L + ERAF + + T + + +
Sbjct: 295 NCGSLTSITIPNSVTTIGRSAFYGCSGLKSITLPDGLTTIEERAFYNCGVLTSITIPNSV 354
Query: 328 KVIGEASFQD-NNLRNVMLPDGLEKIESEAFTGNPGDEHYNNQVVLRTRTGQNPHQLATE 386
IGE++F + L+++ LPDGL IE AF N L + T N E
Sbjct: 355 ATIGESAFYGCSGLKSITLPDGLTTIEWGAFY---------NCGALTSITIPNSVSTIGE 405
Query: 387 NTYVNPDKSLWRATPDMDYTKWLEEDFTYQKNSVTGFS---NKGLQKVRRNKNLEIPKQH 443
+ + +L T D ++ D +++ +++G G + V K ++ K+
Sbjct: 406 SAFYGCG-ALKDVTVAWDTPIDIQRD-VFRELTLSGIRLHVPAGKKTVYEAK--DVWKEF 461
Query: 444 NGITITEIGDNAFRNVDFQSKTLRKYDLEEIKLPSTIRKIGAFAFQSNNLKSFEASEDLE 503
N + + G + N D +KTL + P T + + FA ++ L
Sbjct: 462 NIVEDDDFGGLQW-NYDAATKTLTITN----PTPDTPKPMPNFATPNDQL---------- 506
Query: 504 EIKEGAFMNNRIGTLDLKDKLIKIGDAAFH-INHIYAIVLPESVQEIGRSAFRQNGALHL 562
GAF I + + D + +GD AF + + +I LP+SV IG+SAF L
Sbjct: 507 ---WGAF-QKEIQKITIGDGVTSVGDFAFSGCDALKSITLPKSVTTIGQSAFSGCWDLRS 562
Query: 563 MFIGNKVKTIGEMAFLSNKLESVNLSEQKQLKTIEVQAFSDN-ALSEVVLPPNLQTIREE 621
+ + + V TIGE AF + LE +++ K + I + F +L+ + LP L I ++
Sbjct: 563 LTLPDGVNTIGEKAFY-DCLELTSITIPKSVTAIGQETFHYCVSLTSLTLPDALTAIGKK 621
Query: 622 AFKR-NHLKEVKGSSTLSQITFNAFD 646
AF N L V +++ I NAFD
Sbjct: 622 AFYSCNALTSVTFPKSITTIGENAFD 647
Score = 106 bits (265), Expect = 2e-21
Identities = 110/408 (26%), Positives = 179/408 (42%), Gaps = 50/408 (12%)
Query: 222 FNAYQLTKLTIPNGYKSIGQDAFVDNKNIAEVNLPESLETISDYAFAHMS-LKQVKLPDN 280
F+ LT +T+PN +IG AF + + +P S+ TI ++AF S LK + LP++
Sbjct: 87 FSDCALTSVTLPNSLTAIGDHAFKGCSGLTSITIPNSVTTIGEWAFKGCSGLKSITLPNS 146
Query: 281 LKVIGELAFFDNQIGGKLYLPRHLIKLAERA-FKSNRIQTVEFLGSKLKVIGEASFQD-N 338
L IG+ A + +P + + E A F + + ++ F S L IGE++F
Sbjct: 147 LTAIGQSALSGCTGLTSITIPNSVTTIGEWAFFGCSGLTSITFPNS-LTAIGESAFYGCG 205
Query: 339 NLRNVMLPDGLEKIESEAFTGNPGDEHYNNQVVLRTRTGQNPHQLATENTYVNPDKSLWR 398
L ++ LPD L I AF G G L++ T N E+ + +
Sbjct: 206 ALTSITLPDALTTIGESAFKGCSG---------LKSITFPNSLTTIGESAFYDCGALTSI 256
Query: 399 ATPDMDYTKWLEEDFTYQKNSVTGFSNKGLQKVRRNKNLEIPKQHNGITITEIGDNAFRN 458
PD ++T K++ P ++T IG++AF N
Sbjct: 257 TLPD----------------ALTTIGRSAFYGCSGLKSITFPN-----SLTTIGESAFYN 295
Query: 459 VDFQSKTLRKYDLEEIKLPSTIRKIGAFAFQS-NNLKSFEASEDLEEIKEGAFMNNRIGT 517
L I +P+++ IG AF + LKS + L I+E AF N + T
Sbjct: 296 CG---------SLTSITIPNSVTTIGRSAFYGCSGLKSITLPDGLTTIEERAFYNCGVLT 346
Query: 518 -LDLKDKLIKIGDAAFH-INHIYAIVLPESVQEIGRSAFRQNGALHLMFIGNKVKTIGEM 575
+ + + + IG++AF+ + + +I LP+ + I AF GAL + I N V TIGE
Sbjct: 347 SITIPNSVATIGESAFYGCSGLKSITLPDGLTTIEWGAFYNCGALTSITIPNSVSTIGES 406
Query: 576 AFLS-NKLESVNLSEQKQLKTIEVQAFSDNALSEVVL--PPNLQTIRE 620
AF L+ V ++ + I+ F + LS + L P +T+ E
Sbjct: 407 AFYGCGALKDVTVAWDTPID-IQRDVFRELTLSGIRLHVPAGKKTVYE 453
Score = 91.3 bits (225), Expect = 8e-17
Identities = 116/469 (24%), Positives = 189/469 (39%), Gaps = 64/469 (13%)
Query: 141 VTRGDTLVGFSKSGINKLSQTSHLVLPSHAADGTQLTQVASFAF----------TPDKKT 190
+T D L +S S + P+ LT + AF PD T
Sbjct: 210 ITLPDALTTIGESAFKGCSGLKSITFPN------SLTTIGESAFYDCGALTSITLPDALT 263
Query: 191 AIAEYTSRLGENGKPSRLDIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIGQDAFVDNKNI 250
I ++ G +G S + I E +N LT +TIPN +IG+ AF +
Sbjct: 264 TIGR-SAFYGCSGLKSITFPNSLTTIGESAFYNCGSLTSITIPNSVTTIGRSAFYGCSGL 322
Query: 251 AEVNLPESLETISDYAFAHMS-LKQVKLPDNLKVIGELAFFDNQIGGKLYLPRHLIKLAE 309
+ LP+ L TI + AF + L + +P+++ IGE AF+ + LP L +
Sbjct: 323 KSITLPDGLTTIEERAFYNCGVLTSITIPNSVATIGESAFYGCSGLKSITLPDGLTTIEW 382
Query: 310 RAFKSNRIQTVEFLGSKLKVIGEASFQD-NNLRNVMLP-DGLEKIESEAFTGNPGDEHYN 367
AF + T + + + IGE++F L++V + D I+ + F
Sbjct: 383 GAFYNCGALTSITIPNSVSTIGESAFYGCGALKDVTVAWDTPIDIQRDVFRE-------- 434
Query: 368 NQVVLRTRTGQNPHQLATENTYVNPDKSLWRA---TPDMDYTKWLEEDFTYQKNSVTGFS 424
T +G H A + T V K +W+ D D+ L+ ++ ++T +
Sbjct: 435 -----LTLSGIRLHVPAGKKT-VYEAKDVWKEFNIVEDDDFGG-LQWNYDAATKTLT-IT 486
Query: 425 NKGLQKVRRNKNLEIP---------KQHNGITI----TEIGDNAFRNVDFQSKTLRKYDL 471
N + N P K+ ITI T +GD AF D L
Sbjct: 487 NPTPDTPKPMPNFATPNDQLWGAFQKEIQKITIGDGVTSVGDFAFSGCD---------AL 537
Query: 472 EEIKLPSTIRKIGAFAFQSN-NLKSFEASEDLEEIKEGAFMNN-RIGTLDLKDKLIKIGD 529
+ I LP ++ IG AF +L+S + + I E AF + + ++ + + IG
Sbjct: 538 KSITLPKSVTTIGQSAFSGCWDLRSLTLPDGVNTIGEKAFYDCLELTSITIPKSVTAIGQ 597
Query: 530 AAFHIN-HIYAIVLPESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAF 577
FH + ++ LP+++ IG+ AF AL + + TIGE AF
Sbjct: 598 ETFHYCVSLTSLTLPDALTAIGKKAFYSCNALTSVTFPKSITTIGENAF 646
Score = 84.0 bits (206), Expect = 1e-14
Identities = 98/355 (27%), Positives = 149/355 (41%), Gaps = 61/355 (17%)
Query: 315 NRIQTVEFLGSKLKVIGEASFQDNNLRNVMLPDGLEKIESEAFTGNPGDEHYNNQVVLRT 374
++IQTV +G + +G +F D L +V LP+ L I AF G G L +
Sbjct: 68 SKIQTVT-IGDGVTSVGNNAFSDCALTSVTLPNSLTAIGDHAFKGCSG---------LTS 117
Query: 375 RTGQNPHQLATENTYVNPDKSLWRATPDMDYTKWLEEDFTYQKNSVTGFSNKGLQKVRRN 434
T P+ + T + S ++ NS+T L
Sbjct: 118 IT--IPNSVTTIGEWAFKGCSGLKSIT--------------LPNSLTAIGQSALSGCTGL 161
Query: 435 KNLEIPKQHNGI------------------TITEIGDNAFRNVDFQSKTLRKYDLEEIKL 476
++ IP I ++T IG++AF L I L
Sbjct: 162 TSITIPNSVTTIGEWAFFGCSGLTSITFPNSLTAIGESAFYGCG---------ALTSITL 212
Query: 477 PSTIRKIGAFAFQS-NNLKSFEASEDLEEIKEGAFMN-NRIGTLDLKDKLIKIGDAAFH- 533
P + IG AF+ + LKS L I E AF + + ++ L D L IG +AF+
Sbjct: 213 PDALTTIGESAFKGCSGLKSITFPNSLTTIGESAFYDCGALTSITLPDALTTIGRSAFYG 272
Query: 534 INHIYAIVLPESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLS-NKLESVNLSEQKQ 592
+ + +I P S+ IG SAF G+L + I N V TIG AF + L+S+ L +
Sbjct: 273 CSGLKSITFPNSLTTIGESAFYNCGSLTSITIPNSVTTIGRSAFYGCSGLKSITLPD--G 330
Query: 593 LKTIEVQAFSD-NALSEVVLPPNLQTIREEAFKR-NHLKEVKGSSTLSQITFNAF 645
L TIE +AF + L+ + +P ++ TI E AF + LK + L+ I + AF
Sbjct: 331 LTTIEERAFYNCGVLTSITIPNSVATIGESAFYGCSGLKSITLPDGLTTIEWGAF 385
Score = 79.3 bits (194), Expect = 3e-13
Identities = 78/282 (27%), Positives = 123/282 (42%), Gaps = 46/282 (16%)
Query: 111 NDASKVEVPKQDTASKKETLETSTWEAKDFVTRGDTLVGFSKSGINKLSQTSHLVLPS-- 168
N+AS E+P SK +T VT GD + + + + TS + LP+
Sbjct: 56 NNAS--EIPWHSLQSKIQT-----------VTIGDGVTSVGNNAFSDCALTS-VTLPNSL 101
Query: 169 -----HAADG----------TQLTQVASFAFT----------PDKKTAIAEYTSRLGENG 203
HA G +T + +AF P+ TAI + ++ G G
Sbjct: 102 TAIGDHAFKGCSGLTSITIPNSVTTIGEWAFKGCSGLKSITLPNSLTAIGQ-SALSGCTG 160
Query: 204 KPSRLDIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIGQDAFVDNKNIAEVNLPESLETIS 263
S + I E F LT +T PN +IG+ AF + + LP++L TI
Sbjct: 161 LTSITIPNSVTTIGEWAFFGCSGLTSITFPNSLTAIGESAFYGCGALTSITLPDALTTIG 220
Query: 264 DYAFAHMS-LKQVKLPDNLKVIGELAFFDNQIGGKLYLPRHLIKLAERAFKS-NRIQTVE 321
+ AF S LK + P++L IGE AF+D + LP L + AF + ++++
Sbjct: 221 ESAFKGCSGLKSITFPNSLTTIGESAFYDCGALTSITLPDALTTIGRSAFYGCSGLKSIT 280
Query: 322 FLGSKLKVIGEASFQD-NNLRNVMLPDGLEKIESEAFTGNPG 362
F S L IGE++F + +L ++ +P+ + I AF G G
Sbjct: 281 FPNS-LTTIGESAFYNCGSLTSITIPNSVTTIGRSAFYGCSG 321
Score = 64.3 bits (155), Expect = 1e-08
Identities = 43/144 (29%), Positives = 70/144 (47%), Gaps = 4/144 (2%)
Query: 220 EIFNAYQ--LTKLTIPNGYKSIGQDAFVDNKNIAEVNLPESLETISDYAFAH-MSLKQVK 276
+++ A+Q + K+TI +G S+G AF + + LP+S+ TI AF+ L+ +
Sbjct: 505 QLWGAFQKEIQKITIGDGVTSVGDFAFSGCDALKSITLPKSVTTIGQSAFSGCWDLRSLT 564
Query: 277 LPDNLKVIGELAFFDNQIGGKLYLPRHLIKLAERAFKSNRIQTVEFLGSKLKVIGEASFQ 336
LPD + IGE AF+D + +P+ + + + F T L L IG+ +F
Sbjct: 565 LPDGVNTIGEKAFYDCLELTSITIPKSVTAIGQETFHYCVSLTSLTLPDALTAIGKKAFY 624
Query: 337 D-NNLRNVMLPDGLEKIESEAFTG 359
N L +V P + I AF G
Sbjct: 625 SCNALTSVTFPKSITTIGENAFDG 648
Score = 55.5 bits (132), Expect = 5e-06
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 511 MNNRIGTLDLKDKLIKIGDAAFHINHIYAIVLPESVQEIGRSAFRQNGALHLMFIGNKVK 570
+ ++I T+ + D + +G+ AF + ++ LP S+ IG AF+ L + I N V
Sbjct: 66 LQSKIQTVTIGDGVTSVGNNAFSDCALTSVTLPNSLTAIGDHAFKGCSGLTSITIPNSVT 125
Query: 571 TIGEMAFLS-NKLESVNLSEQKQLKTIEVQAFSD-NALSEVVLPPNLQTIREEAFKRNHL 628
TIGE AF + L+S+ L L I A S L+ + +P ++ TI E AF
Sbjct: 126 TIGEWAFKGCSGLKSITLP--NSLTAIGQSALSGCTGLTSITIPNSVTTIGEWAF----- 178
Query: 629 KEVKGSSTLSQITF 642
G S L+ ITF
Sbjct: 179 ---FGCSGLTSITF 189
>gi|23380360|gb|AAN18285.1| immunoreactive protein Se110
[Streptococcus equi]
Length = 178
Score = 97.1 bits (240), Expect = 2e-18
Identities = 72/182 (39%), Positives = 100/182 (54%), Gaps = 8/182 (4%)
Query: 3 KKHLKTLALALTTVSVVTYSQEVYGLEREESVKQEQTQSASEDDWFEEDNERKTNVSKEN 62
KK + LAL L ++ + Q V+ LER+E+ ++ +S DDWF+ED S
Sbjct: 4 KKCPQILALFLAFAALASQGQTVHALERQETSVKQAHES---DDWFDEDEGVSDIKSNTP 60
Query: 63 STVDETVSDLFSDGNSNNSSSKTESVVSDPKQ-VPKAKPEVTQEASNSSNDASKVEVPKQ 121
+ +D TV++LF D + K ES PKQ A+ + +E S S D + V Q
Sbjct: 61 TEIDSTVTELFGDAEPKTKAEKEESKAPSPKQEALPAESQKEKETSAKSTDHATV----Q 116
Query: 122 DTASKKETLETSTWEAKDFVTRGDTLVGFSKSGINKLSQTSHLVLPSHAADGTQLTQVAS 181
++ E S W A DFVT+GDTLVG SK+G+ KLS+T LVLP D T LT++AS
Sbjct: 117 AEEAQPEQGSDSPWLADDFVTKGDTLVGLSKAGLAKLSKTPVLVLPRIGIDKTVLTRIAS 176
Query: 182 FA 183
FA
Sbjct: 177 FA 178
>gi|20093081|ref|NP_619156.1| cell surface protein [Methanosarcina
acetivorans str. C2A]
gi|19918410|gb|AAM07636.1| cell surface protein [Methanosarcina
acetivorans str. C2A]
Length = 1995
Score = 88.6 bits (218), Expect = 5e-16
Identities = 129/512 (25%), Positives = 197/512 (38%), Gaps = 84/512 (16%)
Query: 175 QLTQVASFAFTPDKKT-AIAEYTSRLGENGKPSRLDIDQKEIIDEGEIFNAYQLTKLTIP 233
Q + + F +T D + I EYT G P+ ++ I + T +TIP
Sbjct: 662 QASHASDFTYTSDGSSITITEYTGSDGIVIIPAEIEGLPVTTIGASAFYGCSAPTTVTIP 721
Query: 234 NGYKSIGQDAFVDNKNIAEVNLPESLETISDYAFAHMS-LKQVKLPDNLKVIGELAFFDN 292
N +IG AF D + V++P+S+ TI D AF S L V +PD++ IG AF D
Sbjct: 722 NSVTTIGDSAFQDCSALTTVSIPDSVTTIGDNAFMSCSALTTVNIPDSVTTIGNYAFQDC 781
Query: 293 QIGGKLYLPRHLIKLAERAFKSNRIQTVEFLGSKLKVIGEASFQD-NNLRNVMLPDGLEK 351
+ + + + AF+ +GS + IG ++FQD + L V +PD +
Sbjct: 782 SALTTVTIGSGVTTIGTSAFQDCSALATVTIGSGVTTIGTSAFQDCSALTTVTIPDSVTT 841
Query: 352 IESEAFTGNPGDEHYNNQVVLRTRTGQN----------PHQLATENTYVNPDKSLWRATP 401
I AF G G + + G P +A + V+ D S + +
Sbjct: 842 IGDSAFGGCSGLTIVTIGSGVTSIGGVTSSSSFVFSDCPTLIAID---VDTDNSAYASID 898
Query: 402 DMDYTKWLEEDFTYQ-------------KNSVTGFSNKGLQKVRRNKNLEIPKQHNGITI 448
+ Y+K D T NSVT ++ IP +I
Sbjct: 899 GILYSK----DATTLIRCPLGKTGPVSVPNSVTTIERVAFSGCTGLTSVAIPD-----SI 949
Query: 449 TEIGDNAFRNVDFQSKTLRKYDLEEIKLPSTIRKIGAFAFQSNNLKSFEASEDLEEIKEG 508
T IGD AF S+ + A ++N S AS D G
Sbjct: 950 TSIGDYAF---------------------SSCSALTAIDVDTDN--SVYASID------G 980
Query: 509 AFMNNRIGTL-----------DLKDKLIKIGDAAFH-INHIYAIVLPESVQEIGRSAFRQ 556
N I TL + D + I +AF + ++ +P+ V IG AF
Sbjct: 981 ILYNKDITTLIRCPPGKTDPVTIPDSVTTIDVSAFSGCTGLTSVTIPDGVTSIGTYAFYG 1040
Query: 557 NGALHLMFIGNKVKTIGEMAFLS-NKLESVNLSEQKQLKTIEVQAFSD-NALSEVVLPPN 614
L + I + V TI AF L SV + + +I AF D + L+ V +P +
Sbjct: 1041 CSGLATVTIPDSVTTIDASAFRDCTALASVTIG--NNVTSIGYYAFRDCSGLTTVTIPDS 1098
Query: 615 LQTIREEAFKR-NHLKEVKGSSTLSQITFNAF 645
+ +I AF + L V S ++ I NAF
Sbjct: 1099 VTSIPSYAFSGCSGLTAVTIGSGVTSIGENAF 1130
Score = 58.2 bits (139), Expect = 8e-07
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 45/210 (21%)
Query: 164 LVLPSHAADGTQLTQVASFAF----------TPDKKTAIAEYTSRLGENGKPSRLDIDQK 213
+V+PS G +T +++ AF TPD T+I +
Sbjct: 1352 VVIPS-TIKGMPVTTISASAFKSNTNITSATTPDSVTSIGD------------------- 1391
Query: 214 EIIDEGEIFNAYQ----LTKLTIPNGYKSIGQDAFVDNKNIAEVNLPESLETISDYAF-A 268
NA+Q LT +TI +G SIG AF + V + ++ TI YAF
Sbjct: 1392 ---------NAFQSCSGLTTVTIGSGVTSIGDSAFYGCNALTSVTIGNNVTTIGTYAFRG 1442
Query: 269 HMSLKQVKLPDNLKVIGELAFFDNQIGGKLYLPRHLIKLAERAFKSNRIQTVEFLGSKLK 328
+L V +PD++ IG AF+ + + ++ + AF+ + T + + +
Sbjct: 1443 CTALTSVTIPDSVTSIGTYAFYGCTYLTSVTIGNNVTSVGSSAFQDCSVLTSVTIPNSVT 1502
Query: 329 VIGEASFQD-NNLRNVMLPDGLEKIESEAF 357
IG +F+D L +V++PD + I S F
Sbjct: 1503 EIGSHAFRDCTTLTSVIIPDSVTSIGSSVF 1532
Score = 55.1 bits (131), Expect = 6e-06
Identities = 38/136 (27%), Positives = 63/136 (45%), Gaps = 12/136 (8%)
Query: 445 GITITEIGDNAFRNVDFQSKTLRKYDLEEIKLPSTIRKIGAFAFQS-NNLKSFEASEDLE 503
G +T IG AFR L + +P ++ IG +AF L S ++
Sbjct: 1429 GNNVTTIGTYAFRGCT---------ALTSVTIPDSVTSIGTYAFYGCTYLTSVTIGNNVT 1479
Query: 504 EIKEGAFMNNRIGT-LDLKDKLIKIGDAAFH-INHIYAIVLPESVQEIGRSAFRQNGALH 561
+ AF + + T + + + + +IG AF + ++++P+SV IG S FR AL
Sbjct: 1480 SVGSSAFQDCSVLTSVTIPNSVTEIGSHAFRDCTTLTSVIIPDSVTSIGSSVFRDCSALT 1539
Query: 562 LMFIGNKVKTIGEMAF 577
+ +GN V +IG F
Sbjct: 1540 SVTVGNNVTSIGSSMF 1555
>gi|23023870|ref|ZP_00063099.1| hypothetical protein [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 538
Score = 82.0 bits (201), Expect = 5e-14
Identities = 95/367 (25%), Positives = 157/367 (41%), Gaps = 45/367 (12%)
Query: 229 KLTIPNGYKSIGQDAFVDNKNIAEVNLPES--LETISDYAFAHMSLKQVKLPD-NLKVIG 285
K+ IPN SI AF N+ IA V+ + L++I D+AFA L V+ P+ N +G
Sbjct: 69 KVVIPNNVTSIASTAFY-NQGIASVDFSSATNLKSIGDFAFAKNRLTAVQYPNLNDNNLG 127
Query: 286 ELAFFDNQIGGKLYLPRHLIKLAERAFKSNRIQTVEFLGSKLKVIGEASFQDNNLRNVML 345
F+DN I + R + + + AF N T + + IG+ +F + L+ V L
Sbjct: 128 WYIFYDNAI-SSVTFARCVTHINDGAFAKNPNLTSVTFPATITSIGDWTFAGDRLKTVDL 186
Query: 346 P----DGLEKIESEAFTGNPGDEHYNNQVVLRTRTGQNP-----HQLATENTYVNPDKSL 396
+ S AF GN + +G +P ++ +NT +
Sbjct: 187 TTIKNTNSLSVGSGAFYGNQASHVAVLPNNVLDSSGNHPVRWYGYETFGQNTGQADAAAK 246
Query: 397 WRATPDMDYTKWLE------EDFTYQKNSVTGFSNKGLQKVRRNKNLEIPKQHNGITITE 450
A Y K + + FTY +N+ T + K + IP +T+
Sbjct: 247 QYALKHQSYGKGVSGSISNPQSFTYDRNNSTIVTGVKSGVATLGKTIVIPTN-----VTK 301
Query: 451 IGDNAFRN-----VDFQSKTLRK-------YDLE---EIKLPST----IRKIGAFAFQSN 491
+ NAF++ VDF T K YD + + LP++ I IG +AF SN
Sbjct: 302 VAANAFKSLGITGVDFSKTTNLKQIGNFAFYDNQISNTLTLPNSLNADISGIGWYAFASN 361
Query: 492 NLKSFE-ASEDLEEIKEGAFMNNRIGTLDLKDKLIKIGDAAFHINHIYAIVLPESVQEIG 550
N+ + L + + F +N++ +++L + L +GD F N + I+LP ++Q +G
Sbjct: 362 NIAKVNLPNNSLTALNDFVFASNQLTSINLPNTLKTMGDGTFIDNQMTNIILPSNIQRVG 421
Query: 551 RSAFRQN 557
F N
Sbjct: 422 SGCFAGN 428
>gi|23052573|ref|ZP_00079204.1| hypothetical protein [Methanosarcina
barkeri]
Length = 1882
Score = 80.1 bits (196), Expect = 2e-13
Identities = 105/439 (23%), Positives = 185/439 (41%), Gaps = 53/439 (12%)
Query: 202 NGKPSRLDI-DQKEIIDEGEIFNAYQLTKLTIPNGYKSIGQDAFVDNKNIAEVNLPESLE 260
+GK + I D I + + LT +TIP+ +IG AF +I VN+ ++
Sbjct: 1007 SGKTGSVTIPDSVTTIGDSAFYGCTALTSVTIPDSVTTIGTSAFQGCISITSVNIGNNVT 1066
Query: 261 TISDYAFAH-MSLKQVKLPDNLKVIGELAFFDNQIGGKLYLPRHLIKLAERAFKSNRIQT 319
+I + AF ++L V + +N+ IG AF + +P + K+ AF+ T
Sbjct: 1067 SIGNSAFCDCIALTSVTIGNNVISIGSYAFQGCAALTSVTIPDSVTKIGSSAFQGCISIT 1126
Query: 320 VEFLGSKLKVIGEASF-QDNNLRNVMLPDGLEKIESEAF---------TGNPGDEHYNNQ 369
+GS + IG ++F Q + L V +PD + I AF T G + ++
Sbjct: 1127 SVNIGSGVTSIGNSAFRQCSALTTVTIPDSVTTILDYAFQDCSRLTTVTIGSGVTNIDSS 1186
Query: 370 VVLRTRTGQNPHQLATENTYVNPDKSLWRATPDMDYTKWLEEDFTYQKNSVTGFSNKGLQ 429
+G + A V+ D S++ + + Y K D T +G
Sbjct: 1187 AF----SGCS----ALTAIDVDNDNSIYASIDGVLYNK----DITTLIQCPSG------- 1227
Query: 430 KVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEEIKLPSTIRKIGAFAFQ 489
+ ++ IP ++T IGD+AFR+ L + + + + IG+ AF
Sbjct: 1228 ---KTGSVTIPD-----SVTTIGDSAFRDCS---------GLTIVPIGNNVTSIGSSAFY 1270
Query: 490 S-NNLKSFEASEDLEEIKEGAFMN-NRIGTLDLKDKLIKIGDAAF-HINHIYAIVLPESV 546
L S ++ I AF + ++ + + + I +AF + + + +P+SV
Sbjct: 1271 GCTYLTSVPIGNNVTSIGSSAFYGCTSLTSVTIGNNVTSISSSAFRQCSALTTVTIPDSV 1330
Query: 547 QEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLSNKLESVNLSEQKQLKTIEVQAFSD-NA 605
IG AF L + IGN V +IG AF ++ ++ + +I AF D
Sbjct: 1331 TTIGDIAFSDCSGLTTVTIGNNVTSIGSSAFYGCTALTL-IAIPDSVTSIGGSAFRDCTN 1389
Query: 606 LSEVVLPPNLQTIREEAFK 624
L+ V + N+ +I AF+
Sbjct: 1390 LTSVTIGNNVTSIGSSAFR 1408
Score = 56.6 bits (135), Expect = 2e-06
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 412 DFTYQKNSVTGFSNKGLQKVRRNKNLEIPKQHNGITITEIGDNAFR------NVDFQSKT 465
DFTY + G S + + + + IP + G+ +T IG +AF+ V +
Sbjct: 680 DFTYTSD---GSSITITKYIGSDGIVIIPAEIEGLPVTTIGTSAFQGCSALTTVTIPNSV 736
Query: 466 LRKYD--------LEEIKLPSTIRKIGAFAFQS-NNLKSFEASEDLEEIKEGAFMN-NRI 515
D L + +P+++ IG +AF S + L + + I +GAF N +
Sbjct: 737 TNIGDYAFMSCSALTAMTIPNSVISIGKYAFSSCSALTTLAIGSGVTAISDGAFYNCPSV 796
Query: 516 GTLDLKDKLIKIGDAAFH-INHIYAIVLPESVQEIGRSAFRQNGALHLMFIGNKVKTIGE 574
T+ + + IG +AF + + + +P+ V IG SAFR AL + I + V +IG
Sbjct: 797 TTVKIGSGVTNIGASAFQGCSALTTVTIPDGVINIGTSAFRSCSALTTVAIPDSVTSIGS 856
Query: 575 MAF 577
AF
Sbjct: 857 SAF 859
Score = 52.0 bits (123), Expect = 5e-05
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 3/191 (1%)
Query: 175 QLTQVASFAFTPDKKT-AIAEYTSRLGENGKPSRLDIDQKEIIDEGEIFNAYQLTKLTIP 233
Q + + F +T D + I +Y G P+ ++ I LT +TIP
Sbjct: 674 QASPASDFTYTSDGSSITITKYIGSDGIVIIPAEIEGLPVTTIGTSAFQGCSALTTVTIP 733
Query: 234 NGYKSIGQDAFVDNKNIAEVNLPESLETISDYAFAHMS-LKQVKLPDNLKVIGELAFFDN 292
N +IG AF+ + + +P S+ +I YAF+ S L + + + I + AF++
Sbjct: 734 NSVTNIGDYAFMSCSALTAMTIPNSVISIGKYAFSSCSALTTLAIGSGVTAISDGAFYNC 793
Query: 293 QIGGKLYLPRHLIKLAERAFKSNRIQTVEFLGSKLKVIGEASFQD-NNLRNVMLPDGLEK 351
+ + + + AF+ T + + IG ++F+ + L V +PD +
Sbjct: 794 PSVTTVKIGSGVTNIGASAFQGCSALTTVTIPDGVINIGTSAFRSCSALTTVAIPDSVTS 853
Query: 352 IESEAFTGNPG 362
I S AF G G
Sbjct: 854 IGSSAFCGCSG 864
>gi|20093078|ref|NP_619153.1| cell surface protein [Methanosarcina
acetivorans str. C2A]
gi|19918405|gb|AAM07633.1| cell surface protein [Methanosarcina
acetivorans str. C2A]
Length = 1734
Score = 79.7 bits (195), Expect = 3e-13
Identities = 107/448 (23%), Positives = 173/448 (37%), Gaps = 57/448 (12%)
Query: 216 IDEGEIFNAYQLTKLTIPNGYKSIGQDAFVDNKNIAEVNLPESLETISDYAFAHMSLKQV 275
ID+ +T +T+P+ IG +AF N+ V +S+ I AF L V
Sbjct: 507 IDDSVFMGYSNMTSVTLPDNVTGIGNNAFQGCTNLTSVTFGDSITEIGSSAFQSTGLTSV 566
Query: 276 KLPDNLKVIGELAFFDNQIGGKLYLPRHLIKLAERAFKSNRIQTVEFLGSKLKVIGEASF 335
LPD++ +G F D + + + ++ F T + + IG+ +F
Sbjct: 567 VLPDSVTSMGSSVFQDCTGLTSVTIGNGTSSIPDKTFYRCDHLTSITISDSVTSIGKYAF 626
Query: 336 QD-NNLRNVMLPDGLEKIESEAFTGN--------PGDEHYNNQVVLRTRTGQNPHQLATE 386
+D NL +V+LPD + I + AF G P ++ R T + +
Sbjct: 627 RDCTNLTSVVLPDSITSIGAYAFEGCTALTSITIPDSVTSIDRYAFRGCTALTSATIGSG 686
Query: 387 NTYVNPD-----KSLWRATPDMDYTKWLEEDFTYQK--------NSVTGFSNKGLQKVRR 433
T + ++ T + T+ + F + N+VT +
Sbjct: 687 VTGIGVGVFYQCTNMASVTIPDNVTEIGNDAFHWCTNLTSMTIGNNVTTIGSSAFNGCTG 746
Query: 434 NKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEEIKLPSTIRKIGAFAFQS-NN 492
++ IP ++T I D AF +L I LP+++ IG F FQ +
Sbjct: 747 LASVTIPD-----SVTTINDFAFSGCT---------NLTSITLPNSVISIGNFVFQDCSA 792
Query: 493 LKSFEASEDLEEIKEGAFMN----NRIGTLDLKDKLIKIGDAAFHINHIYAIVL------ 542
L S L I F + N I +D + + D + + A+VL
Sbjct: 793 LTSVTFGSGLTSIGSNVFQSCTALNAI-NVDANNTVYTSIDGIVYNKDVTAVVLFPSAKA 851
Query: 543 -----PESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLS-NKLESVNLSEQKQLKTI 596
P+SV I AF L + IGN V TIG+ AF L S+ + + ++ I
Sbjct: 852 GSLVIPDSVTSISSYAFYGCAGLTSVTIGNSVTTIGDQAFNGCTALTSITIPD--RVTEI 909
Query: 597 EVQAFSD-NALSEVVLPPNLQTIREEAF 623
+ AF D +AL+ L TI E AF
Sbjct: 910 GICAFQDCSALTSATFGTGLLTIGENAF 937
Score = 69.7 bits (169), Expect = 3e-10
Identities = 90/352 (25%), Positives = 139/352 (38%), Gaps = 70/352 (19%)
Query: 300 LPRHLIKLAERAFKSNRIQTVEFLGSKLKVIGEASFQDNNLRNVMLPDGLEKIESEAFTG 359
LP ++ + AF+ T G + IG ++FQ L +V+LPD + + S F
Sbjct: 523 LPDNVTGIGNNAFQGCTNLTSVTFGDSITEIGSSAFQSTGLTSVVLPDSVTSMGSSVFQD 582
Query: 360 NPGDEHYNNQVVLRTRTGQNPHQLATENTYVNPDKSLWRATPDMDYTKWLEEDFTYQKNS 419
G L + T N T PDK+ +R S
Sbjct: 583 CTG---------LTSVTIGN-------GTSSIPDKTFYRCD---------------HLTS 611
Query: 420 VTGFSNKGLQKVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEEIKLPST 479
+T S+ ++T IG AFR+ +L + LP +
Sbjct: 612 IT-ISD---------------------SVTSIGKYAFRDCT---------NLTSVVLPDS 640
Query: 480 IRKIGAFAFQS-NNLKSFEASEDLEEIKEGAFMN-NRIGTLDLKDKLIKIGDAAFH-INH 536
I IGA+AF+ L S + + I AF + + + + IG F+ +
Sbjct: 641 ITSIGAYAFEGCTALTSITIPDSVTSIDRYAFRGCTALTSATIGSGVTGIGVGVFYQCTN 700
Query: 537 IYAIVLPESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLS-NKLESVNLSEQKQLKT 595
+ ++ +P++V EIG AF L M IGN V TIG AF L SV + + + T
Sbjct: 701 MASVTIPDNVTEIGNDAFHWCTNLTSMTIGNNVTTIGSSAFNGCTGLASVTIPD--SVTT 758
Query: 596 IEVQAFSD-NALSEVVLPPNLQTIREEAFKR-NHLKEVKGSSTLSQITFNAF 645
I AFS L+ + LP ++ +I F+ + L V S L+ I N F
Sbjct: 759 INDFAFSGCTNLTSITLPNSVISIGNFVFQDCSALTSVTFGSGLTSIGSNVF 810
Score = 65.5 bits (158), Expect = 5e-09
Identities = 71/281 (25%), Positives = 114/281 (40%), Gaps = 63/281 (22%)
Query: 376 TGQNP-HQLATENTYV-------NPDKSLWRATPDMDYTKWLEEDFTYQKN----SVTGF 423
T QNP H T TY + W T + +TY + ++TG+
Sbjct: 427 TEQNPMHTYETPGTYAVRLNVTYSEGSDEWVKTAYITVNTPAANYYTYTGSGSSVTITGY 486
Query: 424 SNKGLQKVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEEIKLPSTIRKI 483
S G ++ IP + G+ +T I D+ F ++ + LP + I
Sbjct: 487 SGPG-------GDVIIPGEIEGLPVTAIDDSVFMGYS---------NMTSVTLPDNVTGI 530
Query: 484 GAFAFQS-NNLKSFEASEDLEEIKEGAFMNNRIGTLDLKDKLIKIGDAAFHINHIYAIVL 542
G AFQ NL S + D + +IG +AF + ++VL
Sbjct: 531 GNNAFQGCTNLTS----------------------VTFGDSITEIGSSAFQSTGLTSVVL 568
Query: 543 PESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLS-NKLESVNLSEQKQLKTIEVQAF 601
P+SV +G S F+ L + IGN +I + F + L S+ +S+ + +I AF
Sbjct: 569 PDSVTSMGSSVFQDCTGLTSVTIGNGTSSIPDKTFYRCDHLTSITISD--SVTSIGKYAF 626
Query: 602 SD-NALSEVVLPPNLQTIREEAFKRNHLKEVKGSSTLSQIT 641
D L+ VVLP ++ +I AF +G + L+ IT
Sbjct: 627 RDCTNLTSVVLPDSITSIGAYAF--------EGCTALTSIT 659
>gi|23052569|ref|ZP_00079200.1| hypothetical protein [Methanosarcina
barkeri]
Length = 1298
Score = 79.3 bits (194), Expect = 3e-13
Identities = 132/605 (21%), Positives = 233/605 (37%), Gaps = 112/605 (18%)
Query: 122 DTASKKETLETSTWEAKDFVTRGDTLVGFSKSGINKLSQTSHLVLPSHAADGTQLTQVAS 181
D A+ T ++ T TL + G + +T+++ + ADG
Sbjct: 162 DDATVDSTARNPSYTYDTPGTYSATLYVNNPWGSDSKLRTNYITVTEAHADG-------- 213
Query: 182 FAFTPDKKT-AIAEYTSRLGENGKPSRLDIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIG 240
+A+T D + + Y+ + P +D I LT +TIP+ +I
Sbjct: 214 WAYTSDGTSVTVTGYSGPDSDVTIPGEIDGLPVTTIGASACKALTSLTSVTIPDSVTTID 273
Query: 241 QDAFVDNKNIAEVNLPESLETISDYAF-AHMSLKQVKLPDNLKVIGELAFFDNQIGGKLY 299
AF N+ V +P+S+ TI AF L V +P+++ IG AF+ +
Sbjct: 274 ASAFYGCTNLISVTMPDSVTTIGSSAFYGCTGLASVTIPNSVTTIGSSAFYGCTGLISVT 333
Query: 300 LPRHLIKLAERAFKS-NRIQTVEFLGSKLKVIGEASFQDNNL--------RNVMLPD--- 347
+P + + AF + + F G+ +G NL N P+
Sbjct: 334 IPNSVTTIGSSAFYGCTNLTVMMFNGNAPTTVGSNWASGTNLVAYYSEGATNFTTPEWNE 393
Query: 348 -----GLEKIESE----------------AFTG---NPGDEHYNNQVVLRTRTGQNP-HQ 382
L +E +TG N D +++N + + T +NP +
Sbjct: 394 VPCYPALTAATAEFTSNIVYGSAPLTVKFTYTGVGANALDWYFDNDSTVDS-TARNPSYT 452
Query: 383 LATENTY------VNPDKSLWRATPDMD--YTKWLE--EDFTYQKN----SVTGFSNKGL 428
T TY NP W + ++ Y E ++FTY + ++TG+S G
Sbjct: 453 YDTPGTYSIKLNVSNP----WGSDSEVKTAYITVAEPVDNFTYLSDGTSVTITGYSGPG- 507
Query: 429 QKVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEEIKLPSTIRKIGAFAF 488
++ IP + +T I D+ F++ ++ + +P ++ IG+ AF
Sbjct: 508 ------GDVVIPSTIGNLPVTAISDSVFKS---------NTNITSVTIPDSVTTIGSSAF 552
Query: 489 QS-NNLKSFEASEDLEEIKEGAFMN-NRIGTLDLKDKLIKIGDAAFH-INHIYAIVLPES 545
L S + I AF + ++ + + + KI D F+ + + ++V+P+S
Sbjct: 553 YGCTGLTSVTIPNSVTTIGNNAFNGCTGLTSMTIGNNVTKIDDRMFYGCSALISVVIPDS 612
Query: 546 VQEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLS-NKLESVNLSEQKQLKTIEVQAFSD- 603
V IG SAF Q L + I + V TI AF N L SV + + + +E + F
Sbjct: 613 VTTIGDSAFYQCSNLASVTIPDSVTTIDSYAFRDCNALTSVTIPD--SVTNVESRLFYGC 670
Query: 604 -----------------------NALSEVVLPPNLQTIREEAFKRNHLKEVKGSSTLSQI 640
+AL+ V +P N+ I AF++ L V + ++ I
Sbjct: 671 TGLTSVTIGIGLDEIPSYMFYGCSALTSVTIPDNVTEIGSNAFRKTGLTSVTIPNKIATI 730
Query: 641 TFNAF 645
+AF
Sbjct: 731 GSSAF 735
>gi|19703554|ref|NP_603116.1| Hypothetical cytosolic protein
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19713650|gb|AAL94415.1| Hypothetical cytosolic protein
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 197
Score = 77.0 bits (188), Expect = 2e-12
Identities = 54/182 (29%), Positives = 90/182 (48%), Gaps = 16/182 (8%)
Query: 403 MDYTKWLEEDFTYQKNSVTGFSNKGLQKVR--RNKNLEIPK-QHNGITITEIGDNAFRNV 459
MD W +DF ++ + + G + KG KV+ +L IP+ +G+ + +I DNAF
Sbjct: 1 MDQNIWEYDDFIFKGDELKGMTQKGKDKVKVEGKTDLVIPELTPDGLPLKKIADNAFYRR 60
Query: 460 DFQSKTLRK------YD------LEEIKLPSTIRKIGAFAFQSNNLKSFEASEDLEEIKE 507
S + YD L+E+KLP + I FAF N L E ++ ++
Sbjct: 61 GLTSVIIPSTVESIGYDAFGVCKLKEVKLPEALVNIEGFAFYRNKLTKVEFGSKVKRLEP 120
Query: 508 GAFMNNRIGTLDLKDKLIKIGDAAFHINHIYAIVLPESVQEIGRSAFRQNGALHLMFIGN 567
+F N + L+L + + IG +AF+ N + + P+SV +I AFR+N +H + + N
Sbjct: 121 SSFAMNELSELNLPETVEYIGASAFYKNSLETVSFPKSVTKIDMYAFRKNN-IHKVEVAN 179
Query: 568 KV 569
V
Sbjct: 180 SV 181
Score = 63.5 bits (153), Expect = 2e-08
Identities = 50/173 (28%), Positives = 84/173 (47%), Gaps = 9/173 (5%)
Query: 130 LETSTWEAKDFVTRGDTLVGFSKSGIN--KLSQTSHLVLPSHAADGTQLTQVASFAFTPD 187
++ + WE DF+ +GD L G ++ G + K+ + LV+P DG L ++A AF
Sbjct: 1 MDQNIWEYDDFIFKGDELKGMTQKGKDKVKVEGKTDLVIPELTPDGLPLKKIADNAFYRR 60
Query: 188 KKTA--IAEYTSRLGENG----KPSRLDIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIGQ 241
T+ I +G + K + + + + EG F +LTK+ + K +
Sbjct: 61 GLTSVIIPSTVESIGYDAFGVCKLKEVKLPEALVNIEGFAFYRNKLTKVEFGSKVKRLEP 120
Query: 242 DAFVDNKNIAEVNLPESLETISDYAFAHMSLKQVKLPDNLKVIGELAFFDNQI 294
+F N+ ++E+NLPE++E I AF SL+ V P ++ I AF N I
Sbjct: 121 SSFAMNE-LSELNLPETVEYIGASAFYKNSLETVSFPKSVTKIDMYAFRKNNI 172
Score = 56.6 bits (135), Expect = 3e-06
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 5/146 (3%)
Query: 502 LEEIKEGAFMNNRIGTLDLKDKLIKIGDAAFHINHIYAIVLPESVQEIGRSAFRQNGALH 561
L++I + AF + ++ + + IG AF + + + LPE++ I AF +N
Sbjct: 49 LKKIADNAFYRRGLTSVIIPSTVESIGYDAFGVCKLKEVKLPEALVNIEGFAFYRNKLTK 108
Query: 562 LMFIGNKVKTIGEMAFLSNKLESVNLSEQKQLKTIEVQAFSDNALSEVVLPPNLQTIREE 621
+ F G+KVK + +F N+L +NL E ++ I AF N+L V P ++ I
Sbjct: 109 VEF-GSKVKRLEPSSFAMNELSELNLPE--TVEYIGASAFYKNSLETVSFPKSVTKIDMY 165
Query: 622 AFKRN--HLKEVKGSSTLSQITFNAF 645
AF++N H EV S L + F F
Sbjct: 166 AFRKNNIHKVEVANSVDLHKFAFETF 191
Score = 53.1 bits (126), Expect = 3e-05
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 237 KSIGQDAFVDNKNIAEVNLPESLETISDYAFAHMSLKQVKLPDNLKVIGELAFFDNQIGG 296
K I +AF + + V +P ++E+I AF LK+VKLP+ L I AF+ N++
Sbjct: 50 KKIADNAFY-RRGLTSVIIPSTVESIGYDAFGVCKLKEVKLPEALVNIEGFAFYRNKL-T 107
Query: 297 KLYLPRHLIKLAERAFKSNRIQTVEFLGSKLKVIGEASFQDNNLRNVMLPDGLEKIESEA 356
K+ + +L +F N + + L ++ IG ++F N+L V P + KI+ A
Sbjct: 108 KVEFGSKVKRLEPSSFAMNELSELN-LPETVEYIGASAFYKNSLETVSFPKSVTKIDMYA 166
Query: 357 FTGN 360
F N
Sbjct: 167 FRKN 170
>gi|27886986|gb|EAA24104.1| Hypothetical Cytosolic Protein
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 197
Score = 75.1 bits (183), Expect = 7e-12
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 403 MDYTKWLEEDFTYQKNSVTGFSNKGLQKVRR--NKNLEIPK-QHNGITITEIGDNAFRNV 459
MD W +DF ++ + + G + KG KV+ +L IP+ +G+ + +I DNAF
Sbjct: 1 MDQNIWEYDDFIFKGDELKGMTQKGKDKVKLEGKTDLVIPELTPDGLPLKKIADNAFYRR 60
Query: 460 DFQSKTLRK------YD------LEEIKLPSTIRKIGAFAFQSNNLKSFEASEDLEEIKE 507
S + YD L+E+KLP + I FAF N L E ++ ++
Sbjct: 61 GLTSVVIPNTVESIGYDAFGVCKLKEVKLPKALVNIEGFAFYRNKLTKVEFGSKVKRLEP 120
Query: 508 GAFMNNRIGTLDLKDKLIKIGDAAFHINHIYAIVLPESVQEIGRSAFRQNGALHLMFIGN 567
+F N + + + L IG +AF+ N+ + P+SV +I AFR+N +H + + N
Sbjct: 121 SSFAMNELAEVTFPETLEYIGASAFYKNNFETVSFPKSVTKIDMYAFRKNN-IHKVEVAN 179
Query: 568 KV 569
V
Sbjct: 180 SV 181
Score = 61.6 bits (148), Expect = 8e-08
Identities = 50/173 (28%), Positives = 81/173 (45%), Gaps = 9/173 (5%)
Query: 130 LETSTWEAKDFVTRGDTLVGFSKSGIN--KLSQTSHLVLPSHAADGTQLTQVASFAFTPD 187
++ + WE DF+ +GD L G ++ G + KL + LV+P DG L ++A AF
Sbjct: 1 MDQNIWEYDDFIFKGDELKGMTQKGKDKVKLEGKTDLVIPELTPDGLPLKKIADNAFYRR 60
Query: 188 KKTA--IAEYTSRLGENG----KPSRLDIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIGQ 241
T+ I +G + K + + + + EG F +LTK+ + K +
Sbjct: 61 GLTSVVIPNTVESIGYDAFGVCKLKEVKLPKALVNIEGFAFYRNKLTKVEFGSKVKRLEP 120
Query: 242 DAFVDNKNIAEVNLPESLETISDYAFAHMSLKQVKLPDNLKVIGELAFFDNQI 294
+F N+ +AEV PE+LE I AF + + V P ++ I AF N I
Sbjct: 121 SSFAMNE-LAEVTFPETLEYIGASAFYKNNFETVSFPKSVTKIDMYAFRKNNI 172
>gi|20093074|ref|NP_619149.1| cell surface protein [Methanosarcina
acetivorans str. C2A]
gi|19918400|gb|AAM07629.1| cell surface protein [Methanosarcina
acetivorans str. C2A]
Length = 1743
Score = 71.6 bits (174), Expect = 6e-11
Identities = 110/506 (21%), Positives = 193/506 (37%), Gaps = 95/506 (18%)
Query: 216 IDEGEIFNAYQLTKLTIPNGYKSIGQDAFVDNKNIAEVNLPESLETISDYAFAHMS-LKQ 274
ID + LT +TIP+ +IG AF + V +P+S+ I + AF + L
Sbjct: 817 IDASAFYGCTNLTSVTIPDSVTNIGSSAFYGCTGLISVTIPDSVTNIDNSAFRGCTGLDS 876
Query: 275 VKLPDNLKVIGELAFFDNQIGGKLYLPRHLIKLAERAFKS-NRIQTVEFLGSKLKVIGEA 333
+ + + + IG AF+ + +P + + AF + + F G+ +G
Sbjct: 877 LTIGNGVTTIGSSAFYGCTGLTSVTIPNSVTTIDTSAFYGCTNLTVMMFNGNAPTTVGSN 936
Query: 334 SFQDNNL--------RNVMLPDGLEKIESEAFTGNPGDEHYNNQV-------VLRTRTGQ 378
NL N P+ E A T E +N V V T TG
Sbjct: 937 WASGTNLVAYYSEGATNFTTPEWNEVPCYPALTAATA-EFTSNSVYGSAPLTVQFTYTGV 995
Query: 379 NPHQLA--------TENTYVNPDKSL---------------WRATPDMD--YTKWLEE-- 411
+ +A ++T NP + W + ++ Y E+
Sbjct: 996 GANAMAWDFGNDGTVDSTARNPGYTYDVPGTYSIKLNVSNPWGSDSEVKTAYVTVAEQVD 1055
Query: 412 DFTYQKN----SVTGFSNKGLQKVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLR 467
+FTY + ++TG+S G ++ IP + +T I + F++
Sbjct: 1056 NFTYTSDGTSVTITGYSGPG-------GDVVIPSTIGDLPVTAISGSVFKS--------- 1099
Query: 468 KYDLEEIKLPSTIRKIGAFAFQS-NNLKSFEASEDLEEIKEGAFMN-NRIGTLDLKDKLI 525
++ + +P ++ IG+ AF L S + I AF + ++ + + +
Sbjct: 1100 NTNINSVTIPDSVTTIGSSAFYGCTGLTSVTIPNSVTTIGNNAFNGCTGLTSVTIGNNVT 1159
Query: 526 KIGDAAFH-INHIYAIVLPESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLS-NKLE 583
KI D F+ + ++V+P+SV IG SAF Q L + I + V TI AF L
Sbjct: 1160 KIDDRVFYGCTALISVVIPDSVTSIGDSAFYQCSNLASVTIPDSVTTIDSYAFRDCTALT 1219
Query: 584 SVNLSEQKQLKTIEVQAFSD------------------------NALSEVVLPPNLQTIR 619
SV + + + +E + F +AL+ V +P N+ I
Sbjct: 1220 SVTIPD--SVTNVESRLFYGCTGLTSVTIGIGLDEIPSYMFYGCSALTSVTIPDNVTEIG 1277
Query: 620 EEAFKRNHLKEVKGSSTLSQITFNAF 645
AF++ L V + ++ I +AF
Sbjct: 1278 INAFRKTALTSVTIGNNVTTIGSSAF 1303
Score = 55.1 bits (131), Expect = 7e-06
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 9/195 (4%)
Query: 174 TQLTQVASFAFTPDKKT-AIAEYTSRLGENGKPSRL-DIDQKEIIDEGEIFNA-YQLTKL 230
T QV +F +T D + I Y+ G+ PS + D+ I G +F + + +
Sbjct: 1049 TVAEQVDNFTYTSDGTSVTITGYSGPGGDVVIPSTIGDLPVTAI--SGSVFKSNTNINSV 1106
Query: 231 TIPNGYKSIGQDAFVDNKNIAEVNLPESLETISDYAFAHMS-LKQVKLPDNLKVIGELAF 289
TIP+ +IG AF + V +P S+ TI + AF + L V + +N+ I + F
Sbjct: 1107 TIPDSVTTIGSSAFYGCTGLTSVTIPNSVTTIGNNAFNGCTGLTSVTIGNNVTKIDDRVF 1166
Query: 290 FDNQIGGKLYLPRHLIKLAERAF-KSNRIQTVEFLGSKLKVIGEASFQD-NNLRNVMLPD 347
+ + +P + + + AF + + + +V S + I +F+D L +V +PD
Sbjct: 1167 YGCTALISVVIPDSVTSIGDSAFYQCSNLASVTIPDS-VTTIDSYAFRDCTALTSVTIPD 1225
Query: 348 GLEKIESEAFTGNPG 362
+ +ES F G G
Sbjct: 1226 SVTNVESRLFYGCTG 1240
>gi|29347306|ref|NP_810809.1| putative cell surface antigen
[Bacteroides thetaiotaomicron VPI-5482]
gi|29339205|gb|AAO77003.1| putative cell surface antigen
[Bacteroides thetaiotaomicron VPI-5482]
Length = 413
Score = 53.9 bits (128), Expect = 2e-05
Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Query: 222 FNAYQLTKLTIPNGYKSIGQDAFVDNKNIAEVNLPESLETISDYAFAH-MSLKQVKLPDN 280
FN ++ K+T+ G KSIG AF N I EV P +LE + + F + LK+ L
Sbjct: 144 FNGSKINKVTLNEGLKSIGDMAFF-NSTIQEVIFPSTLEQLEENIFYYCYHLKKADLSRT 202
Query: 281 LKVIGELAFFDNQIGGKLYLPRHLIKLAERAF-KSNRIQTVEFLGSKLKVIGEASFQDNN 339
+ F ++ LP L ++ +AF K+++++T+E + ++ IG +F++++
Sbjct: 203 KLTKLPASTFVYAGVEEVLLPATLTEIDAQAFLKTSQLKTIE-IPENVRTIGLEAFRESS 261
Query: 340 LRNVMLPDGLEKIESEAF 357
+ V LP+G+ I AF
Sbjct: 262 ITTVKLPNGVTNIAQRAF 279
>gi|22090596|gb|AAM51159.1| putative surface protein [Trichomonas
vaginalis]
Length = 625
Score = 53.9 bits (128), Expect = 2e-05
Identities = 47/205 (22%), Positives = 92/205 (43%), Gaps = 19/205 (9%)
Query: 141 VTRGDTLVGFSKSGINKLSQTSHLVLPSHAADGTQLTQVASFAFT----------PDKKT 190
+T G+++ F + ++ S + + +P+ +T + FAF+ P+ T
Sbjct: 67 ITIGNSVTSFGQEAFSECSSITSITIPN------SVTTIRDFAFSGCSKLTSITIPNSVT 120
Query: 191 AIAEYTSRLGENGKPSRLDIDQKEIIDEGEIFNAYQLTKLTIPNGYKSIGQDAFVDNKNI 250
++ + R G +G S + D +I + LT +TIPN SI AF ++
Sbjct: 121 SLGSHAFR-GCSGLTSIIIPDSVTLIRGSIFYGCSSLTSITIPNSVTSIYSSAFYGCSSL 179
Query: 251 AEVNLPESLETISDYAFAHMS-LKQVKLPDNLKVIGELAFFDNQIGGKLYLPRHLIKLAE 309
+ +P+S+ AF S L +K+ +N+ IG LAF + +P + +A
Sbjct: 180 TSITIPDSVLDFGSAAFQECSKLTNIKIGNNVDSIGSLAFKRCSSLTNITIPDSVTTIAN 239
Query: 310 RAF-KSNRIQTVEFLGSKLKVIGEA 333
AF + +++ ++ S ++ G A
Sbjct: 240 SAFYECSKLTSITIGKSVTRIEGNA 264
Score = 52.4 bits (124), Expect = 5e-05
Identities = 51/213 (23%), Positives = 102/213 (46%), Gaps = 21/213 (9%)
Query: 418 NSVTGFSNKGLQKVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEEIKLP 477
NSVT F + + ++ IP ++T I D AF L I +P
Sbjct: 71 NSVTSFGQEAFSECSSITSITIPN-----SVTTIRDFAFSGCS---------KLTSITIP 116
Query: 478 STIRKIGAFAFQS-NNLKSFEASEDLEEIKEGAFMN-NRIGTLDLKDKLIKIGDAAFH-I 534
+++ +G+ AF+ + L S + + I+ F + + ++ + + + I +AF+
Sbjct: 117 NSVTSLGSHAFRGCSGLTSIIIPDSVTLIRGSIFYGCSSLTSITIPNSVTSIYSSAFYGC 176
Query: 535 NHIYAIVLPESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAFLSNKLESV-NLSEQKQL 593
+ + +I +P+SV + G +AF++ L + IGN V +IG +AF + S+ N++ +
Sbjct: 177 SSLTSITIPDSVLDFGSAAFQECSKLTNIKIGNNVDSIGSLAF--KRCSSLTNITIPDSV 234
Query: 594 KTIEVQAFSD-NALSEVVLPPNLQTIREEAFKR 625
TI AF + + L+ + + ++ I AF +
Sbjct: 235 TTIANSAFYECSKLTSITIGKSVTRIEGNAFSK 267
>gi|15639217|ref|NP_218665.1| leucine-rich repeat protein TpLRR
[Treponema pallidum]
gi|7459032|pir||G71350 probable leucine-rich repeat protein TpLRR -
syphilis spirochete
gi|2104502|gb|AAC45304.1| leucine-rich repeat protein TpLRR
[Treponema pallidum]
gi|3322494|gb|AAC65213.1| leucine-rich repeat protein TpLRR
[Treponema pallidum]
Length = 246
Score = 53.5 bits (127), Expect = 2e-05
Identities = 50/176 (28%), Positives = 74/176 (41%), Gaps = 21/176 (11%)
Query: 420 VTGFSNKGLQKVRRNKNLEIPKQHNGITITEIGDNAFRNVDFQSKTLRKYDLEEIKLPST 479
+T + KG+ V +P Q +G+ + E+ AF L + LPS+
Sbjct: 56 ITRYLGKGIAVV-------LPSQIDGLPVVEVATKAFYGC---------VSLVRVSLPSS 99
Query: 480 IRKIGAFAFQS-NNLKSFEASEDLEEIKEGAFMNN-RIGTLDLKDKLIKIGDAAF-HINH 536
+R IG AF L E + L EI+ AF + + L IG F
Sbjct: 100 VRMIGQHAFDGCTKLARIELPDGLREIRHHAFHKCVSLAGIVFPRSLQVIGQDVFSSCGS 159
Query: 537 IYAIVLPESVQEIGRSAFRQNGALHLMFIGNKVKTIGEMAF--LSNKLESVNLSEQ 590
+ +VLP SV+EIG AFR L + + VK + + F N +E NL E+
Sbjct: 160 LVDVVLPNSVKEIGSGAFRDCAELASVRLPVGVKNLADGLFEGCRNLVELGNLPEK 215
>gi|1914872|emb|CAB04758.1| PCPA [Streptococcus pneumoniae]
Length = 708
Score = 52.4 bits (124), Expect = 4e-05
Identities = 50/177 (28%), Positives = 78/177 (43%), Gaps = 19/177 (10%)
Query: 111 NDASKVEVPKQDTASKKETLETSTWEAKDFVTRGDTLVGFSKSGINKLSQTSHLVLPSHA 170
+ +SK+E+ + + LE T K T G L + S +N L +V +
Sbjct: 205 SSSSKLELISHEAFANLSNLEKLTL-PKSVKTLGSNLFRLTTS-LNMLMLRGMIVA---S 259
Query: 171 ADGTQLTQVASFAFTPDKKTAIAEYTSRLGENGKPSRLDIDQKEIIDEGEIFNAYQLTKL 230
DG + P +K N + + + KE+ N+Y L KL
Sbjct: 260 VDGVSFQSKTQLIYYPSQK------------NDESYKTPKETKELASYSFNKNSY-LKKL 306
Query: 231 TIPNGYKSIGQDAFVDNKNIAEVNLPESLETISDYAF-AHMSLKQVKLPDNLKVIGE 286
+ G + IG AF D + E++LP SLETI AF ++ LK++ LPDN+K G+
Sbjct: 307 ELNEGLQKIGTFAFADATKLEEISLPNSLETIERLAFYGNLELKELILPDNVKNFGK 363
Database: nr
Posted date: Aug 11, 2003 9:58 AM
Number of letters in database: 479,114,161
Number of sequences in database: 1,487,057
Lambda K H
0.312 0.131 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 949,777,275
Number of Sequences: 1487057
Number of extensions: 41159268
Number of successful extensions: 118520
Number of sequences better than 1.0e-04: 24
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 117825
Number of HSP's gapped (non-prelim): 178
length of query: 1055
length of database: 479,114,161
effective HSP length: 134
effective length of query: 921
effective length of database: 279,848,523
effective search space: 257740489683
effective search space used: 257740489683
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 121 (51.2 bits)