R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|4587550|gb|AAD25781.1|AC006577_17 (AC006577) EST gb|R64848 comes from this
gene. [Arabidopsis thaliana]
Length = 622
Frame 2 hits (HSPs): _____
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | 622
0 150 300 450 600
Plus Strand HSPs:
Score = 227 (79.9 bits), Expect = 2.7e-23, Sum P(2) = 2.7e-23
Identities = 46/123 (37%), Positives = 71/123 (57%), Frame = +1
Query: 121 SCFVDASKASMLQLLNFGEAMSTGPHQPEKLFRVLDIYEVLQDLMPDIDALYSDEVGSSV 300
+CF++ K S LQL NF EA+S PEKLF++LD+++ + DL+PD++ ++ S+
Sbjct: 271 TCFMEIVKTSALQLFNFPEAISISRRSPEKLFKILDLHDAITDLLPDMEEIFDSSSSESI 330
Query: 301 KIECHEGSERKLGDCVRVTFLEI*KMPLQQMLSSTPFVGCGIHPLTKYVMNYLRTLTDYS 480
++ E R L + R E ++ S P G IHPLT+YVMNYL ++DY
Sbjct: 331 LVQATEIQSR-LAEAARGILTEFENAVFREP-SVVPVPGGTIHPLTRYVMNYLNLISDYR 388
Query: 481 DIL 489
+ L
Sbjct: 389 ETL 391
Score = 83 (29.2 bits), Expect = 2.7e-23, Sum P(2) = 2.7e-23
Identities = 20/51 (39%), Positives = 31/51 (60%), Frame = +2
Query: 14 KIKRWIWAVKIFVRVYLASERWLSDQIF-GRVSLLVYLVLLMHLRLRCCSF 163
KI+RWI A K+ VRV ASE+ L +QIF G + ++ ++ L+ +F
Sbjct: 237 KIRRWIRAAKVCVRVVFASEKRLCEQIFEGTMEETCFMEIVKTSALQLFNF 287
>gi|100226|pir||S21495 tomato leucine zipper-containing protein - tomato
>gi|19275|emb|CAA78112.1| (Z12127) protein of unknown function
[Lycopersicon esculentum] >gi|445619|prf||1909366A Leu zipper
protein [Lycopersicon esculentum]
Length = 631
Frame 2 hits (HSPs): ____
Frame 1 hits (HSPs): _________
Annotated Domains: ___
__________________________________________________
Database sequence: | | | | | | 631
0 150 300 450 600
__________________
Annotated Domains:
PROSITE LEUCINE_ZIPPER: Leucine zipper pattern. 109..130
__________________
Plus Strand HSPs:
Score = 233 (82.0 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 45/112 (40%), Positives = 76/112 (67%), Frame = +1
Query: 127 FVDASKASMLQLLNFGEAMSTGPHQPEKLFRVLDIYEVLQDLMPDIDALYSDEVGSSVKI 306
F++ S+ S +QLLNF +A++ PE+LF+VLD+YE L+DLMP + ++SD+ ++
Sbjct: 292 FMEVSRGSTIQLLNFADAVAISSRAPERLFKVLDVYEALRDLMPKFEFMFSDQYCVLLRN 351
Query: 307 ECHEGSERKLGDCVRVTFLEI*KMPLQQMLSSTPFVGCGIHPLTKYVMNYLR 462
E R+LG+ +R F+E+ + +++ + TP G G+HP+T+YVMNY+R
Sbjct: 352 EALT-IWRRLGEAIRGIFMELENL-IRRDPAKTPVPGGGLHPITRYVMNYIR 401
Score = 69 (24.3 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 12/31 (38%), Positives = 21/31 (67%), Frame = +2
Query: 5 LNSKIKRWIWAVKIFVRVYLASERWLSDQIF 97
L +I++W+ AV + +R+ SER L D++F
Sbjct: 251 LEDEIEKWVKAVNVALRILFPSERRLCDRVF 281
>gi|6730754|gb|AAF27143.1|AC016529_6 (AC016529) unknown protein [Arabidopsis
thaliana]
Length = 633
Frame 2 hits (HSPs): ___
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | 633
0 150 300 450 600
Plus Strand HSPs:
Score = 216 (76.0 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 44/123 (35%), Positives = 73/123 (59%), Frame = +1
Query: 121 SCFVDASKASMLQLLNFGEAMSTGPHQPEKLFRVLDIYEVLQDLMPDIDALYSDEVGSSV 300
+CF++ K +QL NF EA+S PEKLF++LD+++ L +L+PDI++++ + S+
Sbjct: 283 ACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALIELLPDIESVFDLKSSDSI 342
Query: 301 KIECHEGSERKLGDCVRVTFLEI*KMPLQQMLSSTPFVGCGIHPLTKYVMNYLRTLTDYS 480
+++ E R L + R E L++ S P G IHPLT+YVMNY+ +++Y
Sbjct: 343 RVQAAEILSR-LAEAARGILSEFENAVLREP-SRVPVPGGTIHPLTRYVMNYISLISEYR 400
Query: 481 DIL 489
L
Sbjct: 401 PTL 403
Score = 83 (29.2 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 18/34 (52%), Positives = 22/34 (64%), Frame = +2
Query: 5 LNSKIKRWIWAVKIFVRVYLASERWLSDQIFGRV 106
L KI+RWI A KI VRV ASE+ L + +F V
Sbjct: 242 LEQKIRRWIRAAKICVRVVFASEKLLCEHVFESV 275
>gi|7378639|emb|CAB83315.1| (AL162751) putative protein [Arabidopsis thaliana]
Length = 638
Frame 2 hits (HSPs): ___
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | 638
0 150 300 450 600
Plus Strand HSPs:
Score = 182 (64.1 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 36/122 (29%), Positives = 72/122 (59%), Frame = +1
Query: 124 CFVDASKASMLQLLNFGEAMSTGPHQPEKLFRVLDIYEVLQDLMPDIDALYSDEVGSSVK 303
CF + + +S+ LL+FG+A++ PEKLF +LD+YE++++L +I+ ++ + ++
Sbjct: 303 CFAEVTVSSVSMLLSFGDAIARSKRSPEKLFVLLDMYEIMRELHTEIETIFKGKACLEIR 362
Query: 304 IECHEGSERKLGDCVRVTFLEI*KMPLQQMLSSTPFVGCGIHPLTKYVMNYLRTLTDYSD 483
+ G ++L + TF + + +++ + T + +HPLT YV+NY++ L DY
Sbjct: 363 -DSATGLTKRLAQTAQETFGDF-EEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQT 420
Query: 484 IL 489
L
Sbjct: 421 TL 422
Score = 67 (23.6 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 14/31 (45%), Positives = 20/31 (64%), Frame = +2
Query: 5 LNSKIKRWIWAVKIFVRVYLASERWLSDQIF 97
L +KI WI ++I V++ A ER + DQIF
Sbjct: 263 LEAKIGNWIHFMRIAVKLLFAGERQVCDQIF 293
>gi|7485417|pir||T00548 hypothetical protein F12L6.4 - Arabidopsis thaliana
>gi|3355467|gb|AAC27829.1| (AC004218) hypothetical protein
[Arabidopsis thaliana]
Length = 637
Frame 2 hits (HSPs): ____
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | 637
0 150 300 450 600
Plus Strand HSPs:
Score = 168 (59.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 37/123 (30%), Positives = 69/123 (56%), Frame = +1
Query: 121 SCFVDASKASMLQLLNFGEAMSTGPHQPEKLFRVLDIYEVLQDLMPDIDALYSDEVGSSV 300
SCF + + + L F E ++ PE++FR++D+Y + DL PDI+ ++ + ++V
Sbjct: 278 SCFYEIVNEAGINLFKFPELVAEKKPSPERIFRLMDLYAAISDLRPDIELIFHFDSVAAV 337
Query: 301 KIECHEGSERKLGDCVRVTFLEI*KMPLQQMLSSTPFVGCGIHPLTKYVMNYLRTLTDYS 480
K S +KL D + + +E + +Q+ S G GIH LT+ M+++ +L++YS
Sbjct: 338 KTLVLS-SLKKLKDSIYTSLMEF-ESTIQKDSSKALTAGGGIHKLTRSTMSFISSLSEYS 395
Query: 481 DIL 489
+L
Sbjct: 396 RVL 398
Score = 61 (21.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 15/37 (40%), Positives = 18/37 (48%), Frame = +2
Query: 5 LNSKIKRWIWAVKIFVRVYLASERWLSDQIFGRVSLL 115
L IK WI A KI V L E+ L D +F S +
Sbjct: 239 LEHMIKNWIKAAKIGVITLLRGEKLLCDHVFSASSTI 275
>gi|4580392|gb|AAD24370.1|AC007171_6 (AC007171) hypothetical protein
[Arabidopsis thaliana]
Length = 573
Frame 2 hits (HSPs): ____
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 573
0 150 300 450
Plus Strand HSPs:
Score = 174 (61.3 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 42/123 (34%), Positives = 70/123 (56%), Frame = +1
Query: 121 SCFVDASKASMLQLLNFGEAMSTGPHQPEKLFRVLDIYEVLQDLMPDIDALYSDEVGSSV 300
S F + + + L L F E M+ PEK+F LD+Y+ + DL+P I+ L+S + S+V
Sbjct: 245 SAFAEITSQTALALFTFPEKMAKCRKSPEKIFLTLDVYQTIVDLLPKINELFSSDSTSTV 304
Query: 301 KIECHEGSERKLGDCVRVTFLEI*KMPLQQMLSSTPFVGCGIHPLTKYVMNYLRTLTDYS 480
+ + + + L + V V+ ++ + + + S + G GIH LT+YVMN++ L DYS
Sbjct: 305 RSQV-DLTLVNLREGV-VSMIDEFESSISKESSKSLISGGGIHQLTRYVMNFIVFLADYS 362
Query: 481 DIL 489
D L
Sbjct: 363 DTL 365
Score = 50 (17.6 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 10/35 (28%), Positives = 17/35 (48%), Frame = +2
Query: 5 LNSKIKRWIWAVKIFVRVYLASERWLSDQIFGRVS 109
+ KI++W+ V + E+ LSD +F S
Sbjct: 205 MEKKIRKWLRTTTRAVNTLFSGEQILSDHVFSSSS 239
>gi|6682232|gb|AAF23284.1|AC016661_9 (AC016661) hypothetical protein
[Arabidopsis thaliana]
Length = 637
Frame 2 hits (HSPs): ____
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | 637
0 150 300 450 600
Plus Strand HSPs:
Score = 156 (54.9 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
Identities = 40/123 (32%), Positives = 67/123 (54%), Frame = +1
Query: 124 CFVDASKASMLQLLNFGEAMST----GPHQPEKLFRVLDIYEVLQDLMPDIDALYSDEVG 291
CF D SK L L F E ++ PH PEK+F +LD+Y + D + I+A++S
Sbjct: 263 CFRDISKEGALLLFGFPETITLRDKKNPH-PEKIFPLLDMYCTITDNLLAIEAIFSFPSI 321
Query: 292 SSVKIECHEGSERKLGDCVRVTFLEI*KMPLQQMLSSTPFVGCGIHPLTKYVMNYLRTLT 471
S+V+ + H R L + + ++ + +++ S T G G+HP+T MN++ L
Sbjct: 322 SNVRTQAHSSLSR-LSESILAHLMDF-ESQIRKDSSKTVVRGGGVHPMTISAMNHISRLA 379
Query: 472 DYSDIL 489
+YS+ L
Sbjct: 380 EYSNAL 385
Score = 65 (22.9 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
Identities = 15/34 (44%), Positives = 21/34 (61%), Frame = +2
Query: 14 KIKRWIWAVKIFVRVYLASERWLSDQIF-GRVSL 112
K+ RWI AVK+ ++ E+ L D+IF VSL
Sbjct: 226 KMNRWIEAVKVSMKTLFNGEKTLCDEIFESSVSL 259
>gi|6682261|gb|AAF23313.1|AC016661_38 (AC016661) hypothetical protein
[Arabidopsis thaliana]
Length = 628
Frame 2 hits (HSPs): ___
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | 628
0 150 300 450 600
Plus Strand HSPs:
Score = 151 (53.2 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 44/134 (32%), Positives = 71/134 (52%), Frame = +1
Query: 94 FWEGEPVGLSCFVDASKASMLQLLNFGEAMSTGP---HQP-EKLFRVLDIYEVLQDLMPD 261
F + + SCF D S+ L L F E ++T H P EK+FR+LD+Y +
Sbjct: 258 FESSDAIRESCFSDISRDGALLLFGFPEIINTKTSKKHSPPEKVFRLLDMYTAIAGNWQA 317
Query: 262 IDALYSDEVGSSVKIECHEGSERKLGDCVRVTFLEI*KMPLQQMLSSTPFVGCGIHPLTK 441
I++++S + S V+ + S L + +R +E + +Q+ S G G+HPLT
Sbjct: 318 IESIFSFDSISVVRSLALK-SLISLSESIRSLLVEF-ESGIQKDSSKVVVPGGGVHPLTI 375
Query: 442 YVMNYLRTLTDYSDIL 489
VM++L L DYS++L
Sbjct: 376 SVMDHLSLLADYSNVL 391
Score = 55 (19.4 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 10/28 (35%), Positives = 16/28 (57%), Frame = +2
Query: 14 KIKRWIWAVKIFVRVYLASERWLSDQIF 97
KI+ W+ AVK+ + E+ L D +F
Sbjct: 231 KIRSWLKAVKVSMETLFKGEKILCDHVF 258
>gi|4580393|gb|AAD24371.1|AC007171_7 (AC007171) unknown protein [Arabidopsis
thaliana]
Length = 605
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | || 605
0 150 300 450 600
Plus Strand HSPs:
Score = 170 (59.8 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 40/126 (31%), Positives = 68/126 (53%), Frame = +1
Query: 112 VGLSCFVDASKASMLQLLNFGEAMSTGPHQPEKLFRVLDIYEVLQDLMPDIDALYSDEVG 291
V SCF + + S L L F +++ EK+F LDIY+ + LMP I+ ++S +
Sbjct: 249 VAESCFTEITLDSALTLFIFPVSVARCKKTVEKIFLTLDIYQTISQLMPQIEEIFSYDST 308
Query: 292 SSVKIECHEGSERKLGDCVRVTFLEI*KMPLQQMLSSTPFVGCGIHPLTKYVMNYLRTLT 471
++V+++ + S LG+ + E + + + S TP G +H LT+YVMN++ L
Sbjct: 309 TAVRLQAAD-SLNNLGEEINSMVAEF-EASITKESSKTPIRGGSVHQLTRYVMNFIVFLA 366
Query: 472 DYSDIL 489
DY + L
Sbjct: 367 DYHECL 372
>gi|7019648|emb|CAB75749.1| (AL132954) putative protein [Arabidopsis thaliana]
Length = 633
Frame 2 hits (HSPs): ____
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | 633
0 150 300 450 600
Plus Strand HSPs:
Score = 123 (43.3 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 31/123 (25%), Positives = 61/123 (49%), Frame = +1
Query: 121 SCFVDASKASMLQLLNFGEAMSTGPHQPEKLFRVLDIYEVLQDLMPDIDALYSDEVGSSV 300
SCF + + + L F E ++ E++F ++D+ + DL DI+ ++ + + V
Sbjct: 276 SCFYEIANEAATNLFKFPEFVAKEKKSHERIFPLMDLQAAISDLWQDIEMIFHFDAVAGV 335
Query: 301 KIECHEGSERKLGDCVRVTFLEI*KMPLQQMLSSTPFVGCGIHPLTKYVMNYLRTLTDYS 480
K + S +KL + + + +Q+ + G GIH LT+ MN++ +L+ YS
Sbjct: 336 KSQALT-SLQKLKVSIHSALTDFESI-IQKDTTKALTPGGGIHKLTRSTMNFISSLSKYS 393
Query: 481 DIL 489
+L
Sbjct: 394 GVL 396
Score = 61 (21.5 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 13/32 (40%), Positives = 16/32 (50%), Frame = +2
Query: 2 TLNSKIKRWIWAVKIFVRVYLASERWLSDQIF 97
TL IK WI A KI + E+ L D +F
Sbjct: 236 TLEHMIKNWIKAAKIGIATLFRGEKLLCDHVF 267
>gi|7486380|pir||T10684 hypothetical protein F3L17.110 - Arabidopsis thaliana
>gi|5262765|emb|CAB45913.1| (AL080283) putative protein
[Arabidopsis thaliana] >gi|7270057|emb|CAB79872.1| (AL161579)
putative protein [Arabidopsis thaliana]
Length = 686
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | 686
0 150 300 450 600
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.21, P = 0.19
Identities = 30/122 (24%), Positives = 57/122 (46%), Frame = +1
Query: 103 GEPVGLSCFVD-ASKASMLQLLNFGEAMSTGPHQPEKLFRVLDIYEVLQDLMPDIDALYS 279
G V + CF A++A ML L FG+ ++ P KL ++LDI+ L L D + L+
Sbjct: 322 GLNVWMDCFSKIAAQAGMLAFLQFGKTVTDSKKDPIKLLKLLDIFTSLNKLRADFNRLFG 381
Query: 280 DEVGSSVKIECHEGSERKLGDCVRVTFLEI*KMPLQQMLSSTPFVGCGIHPLTKYVMNYL 459
++ + +R + + + + ++ +Q+ + P G G+ L +V +Y
Sbjct: 382 GAACIEIQNFTRDLIKRIIDGAAEIFWELLVQVEIQKQ-TPPPSDG-GVPRLVSFVTDYC 439
Query: 460 RTL 468
L
Sbjct: 440 NKL 442
>gi|123954|sp|P27947|I78_ASFB7 EARLY PROTEIN I78R >gi|74419|pir||WMXFB5 I78L
protein - African swine fever virus (strain BA71V)
>gi|210623|gb|AAA42703.1| (M77121) I78L protein [African swine
fever virus]
Length = 78
Frame 2 hits (HSPs): __________________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 78
0 20 40 60
__________________
Annotated Domains:
PRODOM PD028135: I78(1) Q65254(1) 1..77
__________________
Plus Strand HSPs:
Score = 61 (21.5 bits), Expect = 4.9, P = 0.99
Identities = 16/53 (30%), Positives = 25/53 (47%), Frame = +2
Query: 104 VSLLVYLVLLMHLR-LRC-CSF*ISVKPCPLALTNPRNCSAFLTYMRFYKTLC 256
V+L +Y VL ++ L+ C + VKP P N + S ++ YK C
Sbjct: 22 VTLYLYHVLFSDIKYLQVTCGLILPVKPLPKKTKNMKTLSILYILLKIYKIFC 74
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.97
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.377 0.173 0.723
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.359 0.160 0.585
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.337 0.150 0.487
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.353 0.155 0.535
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.340 0.145 0.473
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.341 0.147 0.522
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 162 162 10. 74 3 12 22 0.10 34
30 0.10 37
+2 0 162 162 10. 74 3 12 22 0.10 34
30 0.10 37
+1 0 163 162 10. 74 3 12 22 0.10 34
30 0.10 37
-1 0 163 163 10. 74 3 12 22 0.10 34
30 0.10 37
-2 0 162 162 10. 74 3 12 22 0.10 34
30 0.10 37
-3 0 162 162 10. 74 3 12 22 0.10 34
30 0.10 37
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 8:50 PM CDT May 27, 2000
Format: BLAST
# of letters in database: 158,518,215
# of sequences in database: 505,245
# of database sequences satisfying E: 12
No. of states in DFA: 590 (58 KB)
Total size of DFA: 201 KB (256 KB)
Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 4
Search cpu time: 212.45u 1.03s 213.48t Elapsed: 00:01:49
Total cpu time: 212.50u 1.08s 213.58t Elapsed: 00:01:49
Start: Wed Feb 14 09:57:10 2001 End: Wed Feb 14 09:58:59 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000