WU-BLAST 2.0 search of the National Center for Biotechnology Information's NR Protein Database.
BEAUTY post-processing provided by the Human Genome Sequencing Center, Baylor College of Medicine.
BEAUTY Reference:
Worley KC, Culpepper P, Wiese BA, Smith RF. BEAUTY-X: enhanced BLAST searches for DNA queries. Bioinformatics 1998;14(10):890-1. Abstract
Worley KC, Wiese BA, Smith RF. BEAUTY: an enhanced BLAST-based search tool that integrates multiple biological information resources into sequence similarity search results. Genome Res 1995 Sep;5(2):173-84 Abstract
RepeatMasker repeats found in sequence:No Repeats Found.Reference: Gish, Warren (1994-1997). unpublished. Gish, Warren and David J. States (1993). Identification of protein coding regions by database similarity search. Nat. Genet. 3:266-72.Notice: statistical significance is estimated under the assumption that the equivalent of one entire reading frame in the query sequence codes for protein and that significant alignments will involve only coding reading frames.
Query= A01D23_CONSENSUS (819 letters)
Translating both strands of query sequence in all 6 reading framesDatabase: nr 625,274 sequences; 197,782,623 total letters.Observed Numbers of Database Sequences Satisfying Various EXPECTation Thresholds (E parameter values) Histogram units: = 3 Sequences : less than 3 sequences EXPECTation Threshold (E parameter) | V Observed Counts--> 10000 861 156 |==================================================== 6310 705 100 |================================= 3980 605 142 |=============================================== 2510 463 83 |=========================== 1580 380 55 |================== 1000 325 60 |==================== 631 265 39 |============= 398 226 44 |============== 251 182 20 |====== 158 162 14 |==== 100 148 7 |== 63.1 141 2 |: 39.8 139 3 |= 25.1 136 5 |= 15.8 131 1 |: >>>>>>>>>>>>>>>>>>>>> Expect = 10.0, Observed = 130 <<<<<<<<<<<<<<<<< 10.0 130 9 |=== 6.31 121 1 |: 3.98 120 3 |= 2.51 117 5 |= 1.58 112 4 |= 1.00 108 2 |: 0.63 106 0 | 0.40 106 3 |= 0.25 103 2 |: 0.16 101 6 |== 0.10 95 5 |= 0.063 90 3 |= 0.040 87 2 |: 0.025 85 1 |: 0.016 84 1 |: 0.010 83 2 |: 0.0063 81 3 |= 0.0040 78 4 |= 0.0025 74 10 |=== 0.0016 64 1 |: Smallest Sum Reading High Probability Sequences producing High-scoring Segment Pairs: Frame Score P(N) N gi|4314390|gb|AAD15600.1|(AC006232) putative Ca2+-bin... +1 305 3.6e-26 1 gi|6624721|emb|CAB63845.1|(AJ251828) putative cystein... +1 270 1.8e-22 1 gi|9955572|emb|CAC05499.1|(AL391716) EF-hand Calcium ... +1 258 3.4e-21 1 gi|6056209|gb|AAF02826.1|AC009400_22(AC009400) unknow... +1 202 4.9e-15 1 gi|90342|pir||S04970calcium-binding protein (clone pM... +1 155 1.1e-12 2 gi|6755000ref|NP_035181.1| programmed cell death 6 [M... +1 155 1.1e-12 2 gi|7019485ref|NP_037364.1| programmed cell death 6 [H... +1 155 1.1e-12 2 gi|12731702ref|XP_004040.2| programmed cell death 6 [... +1 155 1.1e-12 2 gi|6912582ref|NP_036524.1| peflin [Homo sapiens] >gi|... +1 144 2.8e-09 2 gi|4507207ref|NP_003121.1| sorcin; Sorcin (class 4 ge... +1 139 5.8e-09 2 gi|1587138|prf||2206278Asorcin [Homo sapiens] +1 139 5.8e-09 2 gi|134734|sp|P05044|SORC_CRILOSORCIN (22 KD PROTEIN) ... +1 145 6.2e-09 1 gi|7289349|gb|AAF45393.1|(AE003000) CG17661 gene prod... +1 146 1.0e-07 1 gi|3212434|pdb|1AJ5|AChain A, Calpain Domain Vi Apo >... +1 130 3.1e-07 1 gi|3024652|sp|Q94743|SORC_SCHJASORCIN >gi|1655733|gb|... +1 128 5.3e-07 1 gi|5051921|gb|AAD38363.1|(AF139373) calpain small sub... +1 124 1.5e-06 1 gi|10835527|pdb|1F4O|AChain A, Crystal Structure Of G... +1 124 1.5e-06 1 gi|2493454|sp|Q64537|CANS_RATCALCIUM-DEPENDENT PROTEA... +1 130 2.2e-06 1 gi|3212511|pdb|1DVI|AChain A, Calpain Domain Vi With ... +1 130 2.2e-06 1 gi|1079058|pir||A55054calpain (EC 3.4.22.17) large ch... +1 143 6.4e-06 1 gi|1705574|sp|Q11002|CAN_DROMECALPAIN (CALCIUM-ACTIVA... +1 143 6.7e-06 1 gi|600420|emb|CAA86993.1|(Z46891) Calpain [Drosophila... +1 143 6.7e-06 1 gi|7302479|gb|AAF57563.1|(AE003796) CalpA gene produc... +1 143 6.7e-06 1 gi|2506056|dbj|BAA22638.1|(AB007824) calpain small su... +1 130 1.2e-05 1 gi|6980466|pdb|1DKV|BChain B, The Crystal Structure O... +1 124 2.2e-05 1 gi|1794205|gb|AAC53002.1|(U53859) calpain small subun... +1 130 2.8e-05 1 gi|2358260|gb|AAB69114.1|(U89513) calpain large subun... +1 136 3.3e-05 1 gi|3820523|gb|AAD04331.1|(AF062404) calpain [Drosophi... +1 136 4.0e-05 1 gi|7294858|gb|AAF50189.1|(AE003550) CalpB gene produc... +1 136 4.0e-05 1 gi|3319068|pdb|1ALV|AChain A, Calcium Bound Domain Vi... +1 120 4.2e-05 1 gi|6753256ref|NP_033925.1| calpain 4 [Mus musculus] >... +1 128 5.0e-05 1 gi|11422561ref|XP_001446.1| GC36 protein [Homo sapiens] +1 131 9.6e-05 1 gi|4960061|gb|AAD34601.1|(AF148956) lens-specific cal... +1 132 0.00010 1 gi|11422559ref|XP_001445.1| calpain 9 (nCL-4) [Homo s... +1 131 0.00010 1 gi|7705383ref|NP_057536.1| GC36 protein [Homo sapiens... +1 131 0.00012 1 gi|5729758ref|NP_006606.1| calpain 9 (nCL-4) [Homo sa... +1 131 0.00012 1 gi|6912388ref|NP_036330.1| grancalcin [Homo sapiens] ... +1 122 0.00013 1 gi|4960059|gb|AAD34600.1|(AF148955) lens-specific cal... +1 131 0.00013 1 gi|4502565ref|NP_001740.1| calpain 4 small subunit; c... +1 124 0.00015 1 gi|11428473ref|XP_002208.1| grancalcin [Homo sapiens] +1 122 0.00023 1 gi|7684607|gb|AAD28254.3|AF127765_1(AF127765) calpain... +1 129 0.00023 1 gi|87013|pir||A34488calpain (EC 3.4.22.17) heavy chai... +1 129 0.00025 1 gi|4704752|gb|AAD28253.1|AF127764_1(AF127764) calpain... +1 129 0.00026 1 gi|11037484|gb|AAG27599.1|AF277376_1(AF277376) calpai... +1 129 0.00026 1 gi|4557405ref|NP_000061.1| calpain, large polypeptide... +1 129 0.00027 1 gi|12738707ref|XP_007541.2| calpain, large polypeptid... +1 129 0.00028 1 gi|1628587|gb|AAB17381.1|(U71320) calpain II [Sus scr... +1 118 0.00030 1 gi|2584822|gb|AAC04848.1|(U96367) calpain Lp82 [Rattu... +1 127 0.00037 1 gi|3661585|gb|AAC61764.1|(AF091998) calpain Lp82 [Mus... +1 127 0.00037 1 gi|7674485|gb|AAD28255.2|AF127766_1(AF127766) calpain... +1 127 0.00038 1 Locally-aligned regions (HSPs) with respect to query sequence: Locus_ID Frame 2 Hits gi|4314390 | _______ gi|9955572 | ______ gi|90342 | _____ gi|6755000 | _____ gi|7019485 | _____ gi|12731702 | _____ gi|6912582 | _____ gi|4507207 | _____ gi|1587138 | _____ Prosite Hits: __ __________________________________________________ Query sequence: | | | | | | | 273 0 50 100 150 200 250 __________________ Prosite hits: TYR_PHOSPHO_SITE Tyrosine kinase phosphorylation site. 195..201 __________________ Locus_ID Frame 1 Hits gi|4314390 | ___________________ gi|6624721 | ____________________ gi|9955572 | ___________________ gi|6056209 | _______________ gi|90342 | ________________ gi|6755000 | ________________ gi|7019485 | ________________ gi|12731702 | ________________ gi|6912582 | __________________ gi|4507207 | _________________ gi|1587138 | _________________ gi|134734 | ____________________ gi|7289349 | ________________ gi|3212434 | _______________ gi|3024652 | __________________ gi|5051921 | _______________ gi|10835527 | ____________________ gi|2493454 | _______________ gi|3212511 | _______________ gi|1079058 | _________________ gi|1705574 | _________________ gi|600420 | _________________ gi|7302479 | _________________ gi|2506056 | _________________ gi|6980466 | _________________ gi|1794205 | _______________ gi|2358260 | _______________ gi|3820523 | _________________ gi|7294858 | _________________ gi|3319068 | _________________ gi|6753256 | _________________ gi|11422561 | ______________ gi|4960061 | _________________ gi|11422559 | ______________ gi|7705383 | ______________ gi|5729758 | ______________ gi|6912388 | ____________________ gi|4960059 | _________________ gi|4502565 | _________________ gi|11428473 | ____________________ gi|7684607 | _________________ gi|87013 | _________________ gi|4704752 | _________________ gi|11037484 | _________________ gi|4557405 | _________________ gi|12738707 | _________________ gi|1628587 | __________________ gi|2584822 | _________________ gi|3661585 | _________________ gi|7674485 | _________________ __________________________________________________ Query sequence: | | | | | | | 273 0 50 100 150 200 250
Use the and icons to retrieve links to Entrez:
WARNING: Descriptions of 80 database sequences were not reported due to the limiting value of parameter V = 50. >gi|4314390|gb|AAD15600.1| (AC006232) putative Ca2+-binding protein [Arabidopsis thaliana] Length = 186 Frame 2 hits (HSPs): _________ Frame 1 hits (HSPs): ____________ ____________________________ __________________________________________________ Database sequence: | | | | | 186 0 50 100 150 Plus Strand HSPs: Score = 305 (107.4 bits), Expect = 3.6e-26, P = 3.6e-26 Identities = 56/101 (55%), Positives = 75/101 (74%), Frame = +1 Query: 145 PKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDG 324 PKE+ LW+CL WR IF RY +DRSGK++ +LRDA Y +G +P SV QL++S++ DG Sbjct: 71 PKEYVELWNCLAQWRAIFNRYDRDRSGKMNSTQLRDAFYNLGCVLPTSVHQLIVSQFDDG 130 Query: 325 SGRRVELGFDSFVECGMIIKGLTDKFKGE--GYTVYG-FSY 438 +G+ V+L FDSF+ECGMI+KGLT+KF+ GYT Y SY Sbjct: 131 TGKTVDLCFDSFLECGMIVKGLTEKFRENDPGYTGYATLSY 171 Score = 109 (38.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06 Identities = 20/30 (66%), Positives = 23/30 (76%), Frame = +2 Query: 404 REKDTRYTGSATLSYDAFMTMVLPFLVSYD 493 RE D YTG ATLSYD FM MV+PF+ +YD Sbjct: 157 RENDPGYTGYATLSYDVFMLMVIPFIATYD 186 Score = 59 (20.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06 Identities = 16/41 (39%), Positives = 23/41 (56%), Frame = +1 Query: 196 FERYXKDRSGKIDPLELRDALYGIGY-AVPGSVLQLLLSKY 315 FE ++RSG ++ ELR AL GY + ++LLL Y Sbjct: 14 FESADRNRSGFLEESELRQALSLSGYDGISNRTIRLLLFIY 54 >gi|6624721|emb|CAB63845.1| (AJ251828) putative cysteine protease [Pisum sativum] Length = 286 Frame 1 hits (HSPs): ___________________ __________________________________________________ Database sequence: | | | | | | | 286 0 50 100 150 200 250 Plus Strand HSPs: Score = 270 (95.0 bits), Expect = 1.8e-22, P = 1.8e-22 Identities = 53/105 (50%), Positives = 72/105 (68%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 GPKEF +L+ L WRGIFER+ KDRSG+ID ELRDAL +GYAV +VL LL+SK+ Sbjct: 181 GPKEFTSLFYSLQSWRGIFERFDKDRSGQIDSNELRDALLSLGYAVSPTVLDLLVSKFDK 240 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFKGEGYTVYGFSYTFIRRL 456 G+ + +D+F+EC + +KGLTDKFK + + + +RRL Sbjct: 241 TGGKHKAVEYDNFIECCLTVKGLTDKFKEKDTGILALQHFPMRRL 285 >gi|9955572|emb|CAC05499.1| (AL391716) EF-hand Calcium binding protein-like [Arabidopsis thaliana] Length = 354 Frame 2 hits (HSPs): ____ Frame 1 hits (HSPs): _______________ __________________________________________________ Database sequence: | | | | 354 0 150 300 Plus Strand HSPs: Score = 258 (90.8 bits), Expect = 3.4e-21, P = 3.4e-21 Identities = 53/101 (52%), Positives = 69/101 (68%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 GPKEF AL+ L +WR IFER KDRSG+ID ELRDAL +G++V VL LL+SK+ Sbjct: 240 GPKEFTALFYSLQNWRSIFERSDKDRSGRIDVNELRDALLSLGFSVSPVVLDLLVSKFDK 299 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFKGEGYTVYGFSYTF 444 G+ + +D+F+EC + +KGLT+KFK E T Y S TF Sbjct: 300 SGGKNRAIEYDNFIECCLTVKGLTEKFK-EKDTAYSGSATF 339 Score = 98 (34.5 bits), Expect = 0.26, P = 0.23 Identities = 17/28 (60%), Positives = 24/28 (85%), Frame = +2 Query: 404 REKDTRYTGSATLSYDAFMTMVLPFLVS 487 +EKDT Y+GSAT +Y++FM VLPFL++ Sbjct: 327 KEKDTAYSGSATFNYESFMLTVLPFLIA 354 >gi|6056209|gb|AAF02826.1|AC009400_22 (AC009400) unknown protein [Arabidopsis thaliana] Length = 330 Frame 1 hits (HSPs): ____________ __________________________________________________ Database sequence: | | | | 330 0 150 300 Plus Strand HSPs: Score = 202 (71.1 bits), Expect = 4.9e-15, P = 4.9e-15 Identities = 38/75 (50%), Positives = 53/75 (70%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 GPKEF +L+ L +WR IFER+ KDRSG+ID ELRDAL +G++V +L LL+SK+ Sbjct: 221 GPKEFTSLFFSLQNWRSIFERFDKDRSGRIDTNELRDALMSLGFSVSPVILDLLVSKFDK 280 Query: 322 GSGRRVELGFDSFVE 366 GR + +D+F+E Sbjct: 281 SGGRNRAIEYDNFIE 295 >gi|90342|pir||S04970 calcium-binding protein (clone pMP41) - mouse (fragment) >gi|50266|emb|CAA33064.1| (X14938) put. calcium-binding protein (153 AA, C-term.) [Mus musculus] Length = 153 Frame 2 hits (HSPs): ________ Frame 1 hits (HSPs): ____________________________ Annotated Domains: ____________ _____ __________________________________________________ Database sequence: | | | | | 153 0 50 100 150 __________________ Annotated Domains: Entrez domain: calmodulin repeat homology #labe 22..54 PROSITE EF_HAND: EF-hand calcium-binding domain. 65..77 __________________ Plus Strand HSPs: Score = 155 (54.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12 Identities = 30/85 (35%), Positives = 49/85 (57%), Frame = +1 Query: 151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330 EF +W + W+ +F Y +D SG ID EL+ AL G GY + +L+ K+ D G Sbjct: 46 EFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF-DRQG 104 Query: 331 RRVELGFDSFVECGMIIKGLTDKFK 405 R ++ FD F++ ++++ LTD F+ Sbjct: 105 RG-QIAFDDFIQGCIVLQRLTDIFR 128 Score = 39 (13.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12 Identities = 8/22 (36%), Positives = 13/22 (59%), Frame = +2 Query: 404 REKDTRYTGSATLSYDAFMTMV 469 R DT G +SY+ +++MV Sbjct: 128 RRYDTDQDGWIQVSYEQYLSMV 149 >gi|6755000 ref|NP_035181.1| programmed cell death 6 [Mus musculus] >gi|2506252|sp|P12815|PCD6_MOUSE PROGRAMED CELL DEATH PROTEIN 6 (PROBABLE CALCIUM-BINDING PROTEIN ALG-2) (PMP41) (ALG-257) >gi|1213520|gb|AAB38108.1| (U49112) ALG-2 [Mus musculus] Length = 191 Frame 2 hits (HSPs): ______ Frame 1 hits (HSPs): _______________________ __________________________________________________ Database sequence: | | | | | 191 0 50 100 150 Plus Strand HSPs: Score = 155 (54.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12 Identities = 30/85 (35%), Positives = 49/85 (57%), Frame = +1 Query: 151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330 EF +W + W+ +F Y +D SG ID EL+ AL G GY + +L+ K+ D G Sbjct: 84 EFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF-DRQG 142 Query: 331 RRVELGFDSFVECGMIIKGLTDKFK 405 R ++ FD F++ ++++ LTD F+ Sbjct: 143 RG-QIAFDDFIQGCIVLQRLTDIFR 166 Score = 39 (13.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12 Identities = 8/22 (36%), Positives = 13/22 (59%), Frame = +2 Query: 404 REKDTRYTGSATLSYDAFMTMV 469 R DT G +SY+ +++MV Sbjct: 166 RRYDTDQDGWIQVSYEQYLSMV 187 >gi|7019485 ref|NP_037364.1| programmed cell death 6 [Homo sapiens] >gi|12230420|sp|O75340|PCD6_HUMAN PROGRAMED CELL DEATH PROTEIN 6 (PROBABLE CALCIUM-BINDING PROTEIN ALG-2) >gi|3342794|gb|AAC27697.1| (AF035606) calcium binding protein [Homo sapiens] >gi|6502505|gb|AAF14336.1|U58773_1 (U58773) calcium binding protein [Homo sapiens] Length = 191 Frame 2 hits (HSPs): ______ Frame 1 hits (HSPs): _______________________ __________________________________________________ Database sequence: | | | | | 191 0 50 100 150 Plus Strand HSPs: Score = 155 (54.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12 Identities = 30/85 (35%), Positives = 49/85 (57%), Frame = +1 Query: 151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330 EF +W + W+ +F Y +D SG ID EL+ AL G GY + +L+ K+ D G Sbjct: 84 EFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF-DRQG 142 Query: 331 RRVELGFDSFVECGMIIKGLTDKFK 405 R ++ FD F++ ++++ LTD F+ Sbjct: 143 RG-QIAFDDFIQGCIVLQRLTDIFR 166 Score = 39 (13.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12 Identities = 8/22 (36%), Positives = 13/22 (59%), Frame = +2 Query: 404 REKDTRYTGSATLSYDAFMTMV 469 R DT G +SY+ +++MV Sbjct: 166 RRYDTDQDGWIQVSYEQYLSMV 187 >gi|12731702 ref|XP_004040.2| programmed cell death 6 [Homo sapiens] Length = 201 Frame 2 hits (HSPs): ______ Frame 1 hits (HSPs): _____________________ __________________________________________________ Database sequence: | | | | || 201 0 50 100 150 200 Plus Strand HSPs: Score = 155 (54.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12 Identities = 30/85 (35%), Positives = 49/85 (57%), Frame = +1 Query: 151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330 EF +W + W+ +F Y +D SG ID EL+ AL G GY + +L+ K+ D G Sbjct: 94 EFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF-DRQG 152 Query: 331 RRVELGFDSFVECGMIIKGLTDKFK 405 R ++ FD F++ ++++ LTD F+ Sbjct: 153 RG-QIAFDDFIQGCIVLQRLTDIFR 176 Score = 39 (13.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12 Identities = 8/22 (36%), Positives = 13/22 (59%), Frame = +2 Query: 404 REKDTRYTGSATLSYDAFMTMV 469 R DT G +SY+ +++MV Sbjct: 176 RRYDTDQDGWIQVSYEQYLSMV 197 >gi|6912582 ref|NP_036524.1| peflin [Homo sapiens] >gi|6009487|dbj|BAA84922.1| (AB018357) ABP32 [Homo sapiens] >gi|6015440|dbj|BAA85163.1| (AB026628) peflin [Homo sapiens] >gi|7022666|dbj|BAA91680.1| (AK001420) unnamed protein product [Homo sapiens] Length = 284 Frame 2 hits (HSPs): ____ Frame 1 hits (HSPs): _________________ __________________________________________________ Database sequence: | | | | | | | 284 0 50 100 150 200 250 Plus Strand HSPs: Score = 144 (50.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09 Identities = 31/92 (33%), Positives = 51/92 (55%), Frame = +1 Query: 154 FAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSGR 333 F+ALW + W+ +F++Y +DRSG I EL+ AL +GY + QLL+S+Y S Sbjct: 176 FSALWKFIQQWKNLFQQYDRDRSGSISYTELQQALSQMGYNLSPQFTQLLVSRYCPRSAN 235 Query: 334 RVELGFDSFVECGMIIKGLTDKFKGEGYTVYG 429 + D F++ ++ LT+ F+ + V G Sbjct: 236 PA-MQLDRFIQVCTQLQVLTEAFREKDTAVQG 266 Score = 56 (19.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09 Identities = 11/21 (52%), Positives = 15/21 (71%), Frame = +2 Query: 404 REKDTRYTGSATLSYDAFMTM 466 REKDT G+ LS++ F+TM Sbjct: 258 REKDTAVQGNIRLSFEDFVTM 278 >gi|4507207 ref|NP_003121.1| sorcin; Sorcin (class 4 gene) [Homo sapiens] >gi|11419205 ref|XP_004593.1| sorcin [Homo sapiens] >gi|267021|sp|P30626|SORC_HUMAN SORCIN (22 KD PROTEIN) (CP-22) (V19) >gi|1082793|pir||S52094 sorcin - human >gi|2136183|pir||S68369 sorcin - human >gi|338482|gb|AAA60588.1| (M32886) sorcin CP-22 [Homo sapiens] >gi|459836|gb|AAA92155.1| (L12387) sorcin [Homo sapiens] >gi|1094394|prf||2106141A sorcin [Homo sapiens] Length = 198 Frame 2 hits (HSPs): _______ Frame 1 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | | 198 0 50 100 150 Plus Strand HSPs: Score = 139 (48.9 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09 Identities = 29/88 (32%), Positives = 48/88 (54%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G EF LW+ L WR F + DRSG +DP EL+ AL +G+ + + + +Y Sbjct: 91 GFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYST 150 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405 +G+ + FD ++ C + ++ LTD F+ Sbjct: 151 -NGK---ITFDDYIACCVKLRALTDSFR 174 Score = 40 (14.1 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09 Identities = 8/23 (34%), Positives = 11/23 (47%), Frame = +2 Query: 404 REKDTRYTGSATLSYDAFMTMVL 472 R +DT G YD F+ V+ Sbjct: 174 RRRDTAQQGVVNFPYDDFIQCVM 196 >gi|1587138|prf||2206278A sorcin [Homo sapiens] Length = 198 Frame 2 hits (HSPs): _______ Frame 1 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | | 198 0 50 100 150 Plus Strand HSPs: Score = 139 (48.9 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09 Identities = 29/88 (32%), Positives = 48/88 (54%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G EF LW+ L WR F + DRSG +DP EL+ AL +G+ + + + +Y Sbjct: 91 GFNEFCELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIACRYST 150 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405 +G+ + FD ++ C + ++ LTD F+ Sbjct: 151 -NGK---ITFDDYIACCVKLRALTDSFR 174 Score = 40 (14.1 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09 Identities = 8/23 (34%), Positives = 11/23 (47%), Frame = +2 Query: 404 REKDTRYTGSATLSYDAFMTMVL 472 R +DT G YD F+ V+ Sbjct: 174 RRRDTAQQGVVNFPYDDFIQCVM 196 >gi|134734|sp|P05044|SORC_CRILO SORCIN (22 KD PROTEIN) (CP-22) (V19) >gi|90213|pir||A25706 sorcin - Chinese hamster >gi|49528|emb|CAA28354.1| (X04656) 22-kd protein (AA 1-198) [Cricetulus longicaudatus] Length = 198 Frame 1 hits (HSPs): ___________________________ Annotated Domains: ________________________________________________ __________________________________________________ Database sequence: | | | | | 198 0 50 100 150 __________________ Annotated Domains: BLOCKS BL00018: EF-hand calcium-binding domain 83..95 DOMO DM01246: CALPAINCATALYTICDOMAIN 12..51 DOMO DM00011: CALMODULINREPEAT 52..95 DOMO DM01221: CALPAINCATALYTICDOMAIN 97..196 Entrez Calcium binding region: SITE 1 (POTENTIA 83..94 Entrez Calcium binding region: SITE 2 (POTENTIA 113..124 Entrez Domain: ANCESTRAL CALCIUM SITE 3 (POTENT 148..158 Entrez Domain: ANCESTRAL CALCIUM SITE 4 (POTENT 177..190 PFAM efhand: EF hand 74..102 PFAM efhand: EF hand 104..132 PRODOM PD003609: CAN2(4) CANS(4) SORC(2) 27..107 PRODOM PD000012: CALM(76) PRVA(15) PRVB(14) 109..160 PRODOM PD018845: SORC(2) GRAN(1) 162..197 PROSITE EF_HAND: EF-hand calcium-binding domain. 113..125 PROSITE EF_HAND: EF-hand calcium-binding domain. 83..95 __________________ Plus Strand HSPs: Score = 145 (51.0 bits), Expect = 6.2e-09, P = 6.2e-09 Identities = 36/103 (34%), Positives = 55/103 (53%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G EF LW+ L WR F + DRSG +DP EL+ AL +G+ + + + +Y Sbjct: 91 GFNEFKELWAVLNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYST 150 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFKGEGYTVYG---FSYT-FIR 450 SG+ + FD ++ C + ++ LTD F+ G FSY FI+ Sbjct: 151 -SGK---ITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYDDFIQ 193 >gi|7289349|gb|AAF45393.1| (AE003000) CG17661 gene product [Drosophila melanogaster] Length = 219 Frame 1 hits (HSPs): __________________ __________________________________________________ Database sequence: | | | | | | 219 0 50 100 150 200 Plus Strand HSPs: Score = 146 (51.4 bits), Expect = 1.0e-07, P = 1.0e-07 Identities = 29/78 (37%), Positives = 45/78 (57%), Frame = +1 Query: 148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327 K+F ALW + W+ F + +D SG ID EL+ AL GY + ++ +LL K+ D Sbjct: 69 KDFGALWKYVTDWQNCFRSFDRDNSGNIDKTELKTALTSFGYRLSDHLIDVLLRKF-DRF 127 Query: 328 GRRVELGFDSFVECGMII 381 GR L FD F++C +++ Sbjct: 128 GRGTIL-FDDFIQCCIVL 144 >gi|3212434|pdb|1AJ5|A Chain A, Calpain Domain Vi Apo >gi|3212435|pdb|1AJ5|B Chain B, Calpain Domain Vi Apo Length = 173 Frame 1 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | | 173 0 50 100 150 Plus Strand HSPs: Score = 130 (45.8 bits), Expect = 3.1e-07, P = 3.1e-07 Identities = 25/76 (32%), Positives = 43/76 (56%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G +EF LW+ + W+GI++R+ DRSG I EL A G+ + + +++ +Y D Sbjct: 65 GFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSD 124 Query: 322 GSGRRVELGFDSFVEC 369 +G + FD+F+ C Sbjct: 125 ETGN---MDFDNFISC 137 >gi|3024652|sp|Q94743|SORC_SCHJA SORCIN >gi|1655733|gb|AAB17908.1| (U39069) sorcin [Schistosoma japonicum] Length = 171 Frame 1 hits (HSPs): _____________________________ Annotated Domains: _________________________________________________ __________________________________________________ Database sequence: | | | | | 171 0 50 100 150 __________________ Annotated Domains: BLOCKS BL00018: EF-hand calcium-binding domain 53..65 Entrez Calcium binding region: POTENTIAL. 16..27 Entrez Calcium binding region: POTENTIAL. 53..64 Entrez Calcium binding region: POTENTIAL. 83..94 PFAM efhand: EF hand 7..35 PFAM efhand: EF hand 44..72 PFAM efhand: EF hand 74..102 PRODOM PD000012: CALM(76) PRVA(15) PRVB(14) 6..65 PRODOM PD000012: CALM(76) PRVA(15) PRVB(14) 79..130 PRODOM PD048635: SORC_SCHJA 132..170 PROSITE EF_HAND: EF-hand calcium-binding domain. 16..28 PROSITE EF_HAND: EF-hand calcium-binding domain. 53..65 PROSITE EF_HAND: EF-hand calcium-binding domain. 83..95 PROSITE LEUCINE_ZIPPER: Leucine zipper pattern. 92..113 __________________ Plus Strand HSPs: Score = 128 (45.1 bits), Expect = 5.3e-07, P = 5.3e-07 Identities = 30/96 (31%), Positives = 50/96 (52%), Frame = +1 Query: 151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330 EF L+ + W+ F RY +D SG ID E +AL GY + + L++ ++ G Sbjct: 64 EFLGLFKYVQDWQTCFRRYDRDNSGSIDLNEFSNALISFGYHLSPQFVNLMMRRFDRNRG 123 Query: 331 RRVELGFDSFVECGMIIKGLTDKF-----KGEGYTVYGF 432 + FD F+ + ++ LT +F +G G+TV+ F Sbjct: 124 ---SIAFDDFIYACVCLQTLTREFSRYDCRGIGHTVFSF 159 >gi|5051921|gb|AAD38363.1| (AF139373) calpain small subunit [Mus musculus] Length = 170 Frame 1 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | | 170 0 50 100 150 Plus Strand HSPs: Score = 124 (43.7 bits), Expect = 1.5e-06, P = 1.5e-06 Identities = 25/76 (32%), Positives = 42/76 (55%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G +EF LW+ + W+ I++R+ DRSG I EL A G+ + + +++ +Y D Sbjct: 90 GFEEFKYLWNNIKKWQAIYKRFDTDRSGTIASHELPGAFEAAGFHLNEHLYSMIIRRYAD 149 Query: 322 GSGRRVELGFDSFVEC 369 SG + FD+F+ C Sbjct: 150 ESGN---MDFDNFISC 162 >gi|10835527|pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium >gi|10835528|pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium >gi|10835529|pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin >gi|10835530|pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin Length = 165 Frame 1 hits (HSPs): ______________________________ __________________________________________________ Database sequence: | | | | | 165 0 50 100 150 Plus Strand HSPs: Score = 124 (43.7 bits), Expect = 1.5e-06, P = 1.5e-06 Identities = 33/102 (32%), Positives = 51/102 (50%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G F LW+ L W+ F +D SG ++ ELR A+ +GY + L ++ +Y Sbjct: 58 GFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK 117 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFKGEGYTVYGFSYTFI 447 +GR + FD +V C + ++ LTD FK + G S FI Sbjct: 118 -NGR---IFFDDYVACCVKLRALTDFFKKRDHLQQG-SADFI 154 >gi|2493454|sp|Q64537|CANS_RAT CALCIUM-DEPENDENT PROTEASE, SMALL SUBUNIT (CALPAIN REGULATORY SUBUNIT) (CALCIUM-ACTIVATED NEUTRAL PROTEINASE) (CANP) >gi|1083614|pir||A55143 calpain (EC 3.4.22.17) light chain - rat (fragment) >gi|9257038|pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain >gi|505658|gb|AAA64828.1| (U10861) calpain small subunit [Rattus norvegicus] Length = 184 Frame 1 hits (HSPs): ____________________ Annotated Domains: ________________________________________________ __________________________________________________ Database sequence: | | | | | 184 0 50 100 150 __________________ Annotated Domains: Entrez Domain: CALCIUM-BINDING. 12..184 Entrez Calcium binding region: SITE 1 (POTENTIA 68..79 Entrez Calcium binding region: SITE 2 (POTENTIA 98..109 Entrez Domain: ANCESTRAL CALCIUM SITE 3 (POTENT 133..144 Entrez Domain: ANCESTRAL CALCIUM SITE 4 (POTENT 163..176 PFAM efhand: EF hand 59..87 PFAM efhand: EF hand 89..117 PFAM efhand: EF hand 154..184 PROSITE EF_HAND: EF-hand calcium-binding domain. 68..80 PROSITE EF_HAND: EF-hand calcium-binding domain. 98..110 __________________ Plus Strand HSPs: Score = 130 (45.8 bits), Expect = 2.2e-06, P = 2.2e-06 Identities = 25/76 (32%), Positives = 43/76 (56%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G +EF LW+ + W+GI++R+ DRSG I EL A G+ + + +++ +Y D Sbjct: 76 GFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSD 135 Query: 322 GSGRRVELGFDSFVEC 369 +G + FD+F+ C Sbjct: 136 ETGN---MDFDNFISC 148 >gi|3212511|pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound >gi|3212512|pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound Length = 184 Frame 1 hits (HSPs): ____________________ __________________________________________________ Database sequence: | | | | | 184 0 50 100 150 Plus Strand HSPs: Score = 130 (45.8 bits), Expect = 2.2e-06, P = 2.2e-06 Identities = 25/76 (32%), Positives = 43/76 (56%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G +EF LW+ + W+GI++R+ DRSG I EL A G+ + + +++ +Y D Sbjct: 76 GFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSD 135 Query: 322 GSGRRVELGFDSFVEC 369 +G + FD+F+ C Sbjct: 136 ETGN---MDFDNFISC 148 >gi|1079058|pir||A55054 calpain (EC 3.4.22.17) large chain - fruit fly (Drosophila melanogaster) >gi|562288|emb|CAA55297.1| (X78555) calpain [Drosophila melanogaster] Length = 805 Frame 1 hits (HSPs): ______ Annotated Domains: _________________ _________ __________________________________________________ Database sequence: | | | | | | | 805 0 150 300 450 600 750 __________________ Annotated Domains: Entrez domain: calpain catalytic domain homolog 90..347 Entrez domain: calmodulin repeat homology #labe 676..708 Entrez domain: calmodulin repeat homology #labe 709..738 Entrez domain: calmodulin repeat homology #labe 741..773 Entrez domain: calmodulin repeat homology #labe 774..805 PROSITE EF_HAND: EF-hand calcium-binding domain. 689..701 PROSITE THIOL_PROTEASE_CYS: Eukaryotic thiol (cy 114..125 __________________ Plus Strand HSPs: Score = 143 (50.3 bits), Expect = 6.4e-06, P = 6.4e-06 Identities = 31/88 (35%), Positives = 48/88 (54%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G +EF L S + W+ IF+ Y + +G++ +LR+AL GY + VL +L +YG Sbjct: 697 GFEEFETLLSEIAKWKAIFKVYDVENTGRVSGFQLREALNSAGYHLNNRVLNVLGHRYGS 756 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405 G+ + FD F+ C + IK D FK Sbjct: 757 RDGK---IAFDDFIMCAVKIKTYIDIFK 781 >gi|1705574|sp|Q11002|CAN_DROME CALPAIN (CALCIUM-ACTIVATED NEUTRAL PROTEINASE) (CANP) >gi|562289|emb|CAA55298.1| (X78555) calpain [Drosophila melanogaster] Length = 828 Frame 1 hits (HSPs): ______ Annotated Domains: __________________________________________________ __________________________________________________ Database sequence: | | | | | | | 828 0 150 300 450 600 750 __________________ Annotated Domains: DOMO DM01305: CALPAINCATALYTICDOMAIN 44..553 DOMO DM01246: CALPAINCATALYTICDOMAIN 555..610 DOMO DM00011: CALMODULINREPEAT 687..724 DOMO DM01221: CALPAINCATALYTICDOMAIN 726..826 Entrez Domain: I, REGULATION OF PROTEASE ACTIVI 1..112 Entrez Domain: II, THIOL PROTEASE. 113..394 Entrez Domain: III, CONTAINS TWO REPEATS. 395..562 Entrez Domain: IV, CALCIUM-BINDING. 563..828 Entrez active site: BY SIMILARITY. 143 Entrez active site: BY SIMILARITY. 299 Entrez active site: BY SIMILARITY. 327 Entrez Calcium binding region: SITE 1 (PROBABLE 712..724 Entrez Calcium binding region: SITE 2 (PROBABLE 742..753 Entrez Domain: ANCESTRAL CALCIUM SITE 3 (POTENT 777..789 Entrez Domain: ANCESTRAL CALCIUM SITE 4 (POTENT 807..819 Entrez Splicing variant: ENDDH -> RTSRQ (IN SHO 554..558 Entrez Splicing variant: MISSING (IN SHORT FORM 559..828 PFAM Peptidase_C2: Calpain family cysteine pr 88..387 PFAM Calpain_III: Calpain large subunit, doma 402..553 PFAM efhand: EF hand 703..731 PFAM efhand: EF hand 733..761 PRINTS CALPAIN1: Calpain motif I - 2 73..96 PRINTS CALPAIN2: Calpain motif II - 2 113..135 PRINTS CALPAIN3: Calpain motif III - 2 137..153 PRINTS CALPAIN4: Calpain motif IV - 2 173..198 PRINTS CALPAIN5: Calpain motif V - 2 203..226 PRINTS CALPAIN6: Calpain motif VI - 2 228..255 PRINTS CALPAIN7: Calpain motif VII - 2 363..384 PRINTS CALPAIN8: Calpain motif VIII - 2 417..434 PRINTS CALPAIN9: Calpain motif IX - 2 519..547 PRODOM PD112555: CAN_DROME 1..71 PRODOM PD002154: CAN2(4) CAN3(4) CAN(2) 73..171 PRODOM PD001545: CAN3(8) CAN2(4) CAN(2) 175..385 PRODOM PD001874: CAN2(8) CAN3(5) CAN(2) 388..552 PRODOM PD112565: CAN_DROME 554..580 PRODOM PD003609: CAN2(4) CANS(4) SORC(2) 582..610 PRODOM PD197268: CAN_DROME 612..694 PRODOM PD003609: CAN2(4) CANS(4) SORC(2) 696..723 PRODOM PD002827: CAN2(4) CANS(4) CAN3(3) 727..789 PRODOM PD054717: CAN(1) O96454(1) 791..827 PROSITE EF_HAND: EF-hand calcium-binding domain. 712..724 PROSITE THIOL_PROTEASE_CYS: Eukaryotic thiol (cy 137..148 __________________ Plus Strand HSPs: Score = 143 (50.3 bits), Expect = 6.7e-06, P = 6.7e-06 Identities = 31/88 (35%), Positives = 48/88 (54%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G +EF L S + W+ IF+ Y + +G++ +LR+AL GY + VL +L +YG Sbjct: 720 GFEEFETLLSEIAKWKAIFKVYDVENTGRVSGFQLREALNSAGYHLNNRVLNVLGHRYGS 779 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405 G+ + FD F+ C + IK D FK Sbjct: 780 RDGK---IAFDDFIMCAVKIKTYIDIFK 804 >gi|600420|emb|CAA86993.1| (Z46891) Calpain [Drosophila melanogaster] Length = 828 Frame 1 hits (HSPs): ______ __________________________________________________ Database sequence: | | | | | | | 828 0 150 300 450 600 750 Plus Strand HSPs: Score = 143 (50.3 bits), Expect = 6.7e-06, P = 6.7e-06 Identities = 31/88 (35%), Positives = 48/88 (54%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G +EF L S + W+ IF+ Y + +G++ +LR+AL GY + VL +L +YG Sbjct: 720 GFEEFETLLSEIAKWKAIFKVYDVENTGRVSGFQLREALNSAGYHLNNRVLNVLGHRYGS 779 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405 G+ + FD F+ C + IK D FK Sbjct: 780 RDGK---IAFDDFIMCAVKIKTYIDIFK 804 >gi|7302479|gb|AAF57563.1| (AE003796) CalpA gene product [Drosophila melanogaster] Length = 828 Frame 1 hits (HSPs): ______ __________________________________________________ Database sequence: | | | | | | | 828 0 150 300 450 600 750 Plus Strand HSPs: Score = 143 (50.3 bits), Expect = 6.7e-06, P = 6.7e-06 Identities = 31/88 (35%), Positives = 48/88 (54%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G +EF L S + W+ IF+ Y + +G++ +LR+AL GY + VL +L +YG Sbjct: 720 GFEEFETLLSEIAKWKAIFKVYDVENTGRVSGFQLREALNSAGYHLNNRVLNVLGHRYGS 779 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405 G+ + FD F+ C + IK D FK Sbjct: 780 RDGK---IAFDDFIMCAVKIKTYIDIFK 804 >gi|2506056|dbj|BAA22638.1| (AB007824) calpain small subunit [Gallus gallus] Length = 214 Frame 1 hits (HSPs): _____________________ __________________________________________________ Database sequence: | | | | | | 214 0 50 100 150 200 Plus Strand HSPs: Score = 130 (45.8 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 29/88 (32%), Positives = 47/88 (53%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G +EF LW+ + W+ +++R+ DRSG I EL A G+ +P + +L +YGD Sbjct: 106 GFEEFKYLWNNIKKWQLVYKRFDTDRSGTIGVQELPGAFEAAGFRLPPELWGVLGRRYGD 165 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405 G L FD+F+ C + + + FK Sbjct: 166 EGGN---LDFDNFISCLVRLDAMFRAFK 190 >gi|6980466|pdb|1DKV|B Chain B, The Crystal Structure Of Calcium-Free Human M-Calpain Length = 184 Frame 1 hits (HSPs): ________________________ __________________________________________________ Database sequence: | | | | | 184 0 50 100 150 Plus Strand HSPs: Score = 124 (43.7 bits), Expect = 2.2e-05, P = 2.2e-05 Identities = 26/88 (29%), Positives = 47/88 (53%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G +EF LW+ + W+ I++++ DRSG I EL A G+ + + +++ +Y D Sbjct: 76 GFEEFKYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYSD 135 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405 SG + FD+F+ C + + + FK Sbjct: 136 ESGN---MDFDNFISCLVRLDAMFRAFK 160 >gi|1794205|gb|AAC53002.1| (U53859) calpain small subunit [Rattus norvegicus] Length = 266 Frame 1 hits (HSPs): _______________ __________________________________________________ Database sequence: | | | | | | | 266 0 50 100 150 200 250 Plus Strand HSPs: Score = 130 (45.8 bits), Expect = 2.8e-05, P = 2.8e-05 Identities = 25/76 (32%), Positives = 43/76 (56%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G +EF LW+ + W+GI++R+ DRSG I EL A G+ + + +++ +Y D Sbjct: 158 GFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSD 217 Query: 322 GSGRRVELGFDSFVEC 369 +G + FD+F+ C Sbjct: 218 ETGN---MDFDNFISC 230 >gi|2358260|gb|AAB69114.1| (U89513) calpain large subunit [Mus musculus] Length = 688 Frame 1 hits (HSPs): ______ __________________________________________________ Database sequence: | | | | | | 688 0 150 300 450 600 Plus Strand HSPs: Score = 136 (47.9 bits), Expect = 3.3e-05, P = 3.3e-05 Identities = 26/74 (35%), Positives = 42/74 (56%), Frame = +1 Query: 148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327 +EF W L HW +F ++ D+SG + ELR AL G+ + G +LQL++ +Y D Sbjct: 582 EEFRVFWDKLKHWMDLFLQFDVDKSGTMSSYELRTALKAAGFQLGGHLLQLIVLRYADED 641 Query: 328 GRRVELGFDSFVEC 369 ++L FD ++ C Sbjct: 642 ---LQLDFDDYLNC 652 >gi|3820523|gb|AAD04331.1| (AF062404) calpain [Drosophila melanogaster] Length = 791 Frame 1 hits (HSPs): ______ __________________________________________________ Database sequence: | | | | | | | 791 0 150 300 450 600 750 Plus Strand HSPs: Score = 136 (47.9 bits), Expect = 4.0e-05, P = 4.0e-05 Identities = 29/88 (32%), Positives = 46/88 (52%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G +EF AL + + WR +F+ Y R+G ID LR AL GY + +L L +YG Sbjct: 683 GFEEFEALLTDIAKWRAVFKLYDTRRTGSIDGFHLRGALNSAGYHLNNRLLNALAHRYGS 742 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405 G ++ FD F+ C + ++ + F+ Sbjct: 743 REG---QIPFDDFLMCAIKVRTFIEMFR 767 >gi|7294858|gb|AAF50189.1| (AE003550) CalpB gene product [Drosophila melanogaster] Length = 791 Frame 1 hits (HSPs): ______ __________________________________________________ Database sequence: | | | | | | | 791 0 150 300 450 600 750 Plus Strand HSPs: Score = 136 (47.9 bits), Expect = 4.0e-05, P = 4.0e-05 Identities = 29/88 (32%), Positives = 46/88 (52%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G +EF AL + + WR +F+ Y R+G ID LR AL GY + +L L +YG Sbjct: 683 GFEEFEALLTDIAKWRAVFKLYDTRRTGSIDGFHLRGALNSAGYHLNNRLLNALAHRYGS 742 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405 G ++ FD F+ C + ++ + F+ Sbjct: 743 REG---QIPFDDFLMCAIKVRTFIEMFR 767 >gi|3319068|pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain >gi|3319069|pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain >gi|3319037|pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain >gi|3319038|pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain Length = 173 Frame 1 hits (HSPs): _________________________ __________________________________________________ Database sequence: | | | | | 173 0 50 100 150 Plus Strand HSPs: Score = 120 (42.2 bits), Expect = 4.2e-05, P = 4.2e-05 Identities = 25/88 (28%), Positives = 46/88 (52%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G +EF LW+ + W+ I++++ DRSG I EL A G+ + + +++ +Y D Sbjct: 65 GFEEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSD 124 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405 G + FD+F+ C + + + FK Sbjct: 125 EGGN---MDFDNFISCLVRLDAMFRAFK 149 >gi|6753256 ref|NP_033925.1| calpain 4 [Mus musculus] >gi|3511116|gb|AAC97194.1| (AF058298) calpain small subunit [Mus musculus] Length = 269 Frame 1 hits (HSPs): _________________ __________________________________________________ Database sequence: | | | | | | | 269 0 50 100 150 200 250 Plus Strand HSPs: Score = 128 (45.1 bits), Expect = 5.0e-05, P = 5.0e-05 Identities = 27/88 (30%), Positives = 47/88 (53%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G +EF LW+ + W+ I++R+ DRSG I EL A G+ + + +++ +Y D Sbjct: 161 GFEEFKYLWNNIKKWQAIYKRFDTDRSGTIGSHELPGAFEAAGFHLNEHLYSMIIRRYAD 220 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405 SG + FD+F+ C + + + FK Sbjct: 221 ESGN---MDFDNFISCLVRLDAMFRAFK 245 >gi|11422561 ref|XP_001446.1| GC36 protein [Homo sapiens] Length = 571 Frame 1 hits (HSPs): _______ __________________________________________________ Database sequence: | | | | | 571 0 150 300 450 Plus Strand HSPs: Score = 131 (46.1 bits), Expect = 9.6e-05, P = 9.6e-05 Identities = 26/73 (35%), Positives = 39/73 (53%), Frame = +1 Query: 151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330 EF W L W +F R+ D+SG + ELR AL G+ + +LQL++ +Y D Sbjct: 466 EFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYAD--- 522 Query: 331 RRVELGFDSFVEC 369 ++L FD F+ C Sbjct: 523 EELQLDFDDFLNC 535 >gi|4960061|gb|AAD34601.1| (AF148956) lens-specific calpain Lp82 [Oryctolagus cuniculus] Length = 709 Frame 1 hits (HSPs): _______ __________________________________________________ Database sequence: | | | | | | 709 0 150 300 450 600 Plus Strand HSPs: Score = 132 (46.5 bits), Expect = 0.00010, P = 0.00010 Identities = 26/85 (30%), Positives = 48/85 (56%), Frame = +1 Query: 148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327 +EF LW + W+ IF+RY D SG I+ E+R+A+ G+ + + ++ +Y D Sbjct: 603 QEFHHLWKKIKAWQKIFKRYDTDHSGTINSYEMRNAVKDAGFHLNSQLYDIITMRYAD-- 660 Query: 328 GRRVELGFDSFVECGMIIKGLTDKF 402 + + + FDSF+ C + ++G+ F Sbjct: 661 -KHMNIDFDSFICCFIRLEGMFRAF 684 >gi|11422559 ref|XP_001445.1| calpain 9 (nCL-4) [Homo sapiens] Length = 597 Frame 1 hits (HSPs): ______ __________________________________________________ Database sequence: | | | | | 597 0 150 300 450 Plus Strand HSPs: Score = 131 (46.1 bits), Expect = 0.00010, P = 0.00010 Identities = 26/73 (35%), Positives = 39/73 (53%), Frame = +1 Query: 151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330 EF W L W +F R+ D+SG + ELR AL G+ + +LQL++ +Y D Sbjct: 492 EFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYAD--- 548 Query: 331 RRVELGFDSFVEC 369 ++L FD F+ C Sbjct: 549 EELQLDFDDFLNC 561 >gi|7705383 ref|NP_057536.1| GC36 protein [Homo sapiens] >gi|7023943|dbj|BAA92137.1| (AB038463) down-regulated in gastric cancer [Homo sapiens] Length = 664 Frame 1 hits (HSPs): ______ __________________________________________________ Database sequence: | | | | | | 664 0 150 300 450 600 Plus Strand HSPs: Score = 131 (46.1 bits), Expect = 0.00012, P = 0.00012 Identities = 26/73 (35%), Positives = 39/73 (53%), Frame = +1 Query: 151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330 EF W L W +F R+ D+SG + ELR AL G+ + +LQL++ +Y D Sbjct: 559 EFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYAD--- 615 Query: 331 RRVELGFDSFVEC 369 ++L FD F+ C Sbjct: 616 EELQLDFDDFLNC 628 >gi|5729758 ref|NP_006606.1| calpain 9 (nCL-4) [Homo sapiens] >gi|2502077|gb|AAB80762.1| (AF022799) digestive tract-specific calpain; calcium-dependent cysteine proteinase [Homo sapiens] Length = 690 Frame 1 hits (HSPs): ______ __________________________________________________ Database sequence: | | | | | | 690 0 150 300 450 600 Plus Strand HSPs: Score = 131 (46.1 bits), Expect = 0.00012, P = 0.00012 Identities = 26/73 (35%), Positives = 39/73 (53%), Frame = +1 Query: 151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330 EF W L W +F R+ D+SG + ELR AL G+ + +LQL++ +Y D Sbjct: 585 EFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYAD--- 641 Query: 331 RRVELGFDSFVEC 369 ++L FD F+ C Sbjct: 642 EELQLDFDDFLNC 654 >gi|6912388 ref|NP_036330.1| grancalcin [Homo sapiens] >gi|1170014|sp|P28676|GRAN_HUMAN GRANCALCIN >gi|284135|pir||A42578 EF-hand calcium-binding protein grancalcin - human >gi|183031|gb|AAA58498.1| (M81637) grancalcin [Homo sapiens] Length = 217 Frame 1 hits (HSPs): _______________________ __________________________________________________ Database sequence: | | | | | | 217 0 50 100 150 200 Plus Strand HSPs: Score = 122 (42.9 bits), Expect = 0.00013, P = 0.00013 Identities = 32/102 (31%), Positives = 51/102 (50%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G F LW+ L W+ F +D SG ++ ELR A+ +GY + L ++ +Y Sbjct: 110 GFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK 169 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFKGEGYTVYGFSYTFI 447 +GR + FD +V C + ++ LTD F+ + G S FI Sbjct: 170 -NGR---IFFDDYVACCVKLRALTDFFRKRDHLQQG-SANFI 206 >gi|4960059|gb|AAD34600.1| (AF148955) lens-specific calpain Lp82 [Sus scrofa] Length = 709 Frame 1 hits (HSPs): _______ __________________________________________________ Database sequence: | | | | | | 709 0 150 300 450 600 Plus Strand HSPs: Score = 131 (46.1 bits), Expect = 0.00013, P = 0.00013 Identities = 25/85 (29%), Positives = 48/85 (56%), Frame = +1 Query: 148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327 +EF LW + W+ IF+ Y D+SG I+ E+R+A+ G+ + + ++ +Y D Sbjct: 603 QEFHHLWKKIKSWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYAD-- 660 Query: 328 GRRVELGFDSFVECGMIIKGLTDKF 402 + + + FDSF+ C + ++G+ F Sbjct: 661 -KYMNIDFDSFIRCFVRLEGMFRAF 684 >gi|4502565 ref|NP_001740.1| calpain 4 small subunit; calpain, small polypeptide; calcium-dependent protease, small subunit; calcium-activated neutral proteinase [Homo sapiens] >gi|11426701 ref|XP_009338.1| calpain 4 small subunit [Homo sapiens] >gi|115612|sp|P04632|CANS_HUMAN CALCIUM-DEPENDENT PROTEASE, SMALL SUBUNIT (CALPAIN REGULATORY SUBUNIT) (CALCIUM-ACTIVATED NEUTRAL PROTEINASE) (CANP) >gi|67665|pir||CIHUL calpain (EC 3.4.22.17) small chain - human >gi|35328|emb|CAA27726.1| (X04106) protease small subunit (aa 1-268) [Homo sapiens] >gi|179909|gb|AAA35646.1| (M31511) neutral protease alpha subunit [Homo sapiens] >gi|1905903|gb|AAB51183.1| (AD001527) calcium-dependent protease, small (regulatory) subunit (calpain) (calcium-activated neutral proteinase) (CANP) [Homo sapiens] >gi|2443873|gb|AAB81546.1| (AC002984) CANS_Human [Homo sapiens] >gi|12653629|gb|AAH00592.1|AAH00592 (BC000592) calpain 4, small subunit (30K) [Homo sapiens] Length = 268 Frame 1 hits (HSPs): _________________ __________________________________________________ Database sequence: | | | | | | | 268 0 50 100 150 200 250 Plus Strand HSPs: Score = 124 (43.7 bits), Expect = 0.00015, P = 0.00015 Identities = 26/88 (29%), Positives = 47/88 (53%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G +EF LW+ + W+ I++++ DRSG I EL A G+ + + +++ +Y D Sbjct: 160 GFEEFKYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYSD 219 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405 SG + FD+F+ C + + + FK Sbjct: 220 ESGN---MDFDNFISCLVRLDAMFRAFK 244 >gi|11428473 ref|XP_002208.1| grancalcin [Homo sapiens] Length = 256 Frame 1 hits (HSPs): ____________________ __________________________________________________ Database sequence: | | | | | | | 256 0 50 100 150 200 250 Plus Strand HSPs: Score = 122 (42.9 bits), Expect = 0.00023, P = 0.00023 Identities = 32/102 (31%), Positives = 51/102 (50%), Frame = +1 Query: 142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321 G F LW+ L W+ F +D SG ++ ELR A+ +GY + L ++ +Y Sbjct: 149 GFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK 208 Query: 322 GSGRRVELGFDSFVECGMIIKGLTDKFKGEGYTVYGFSYTFI 447 +GR + FD +V C + ++ LTD F+ + G S FI Sbjct: 209 -NGR---IFFDDYVACCVKLRALTDFFRKRDHLQQG-SANFI 245 >gi|7684607|gb|AAD28254.3|AF127765_1 (AF127765) calpain 3; calcium activated neutral protease; CAPN3; CL1 [Homo sapiens] Length = 729 Frame 1 hits (HSPs): _______ __________________________________________________ Database sequence: | | | | | | 729 0 150 300 450 600 Plus Strand HSPs: Score = 129 (45.4 bits), Expect = 0.00023, P = 0.00023 Identities = 25/85 (29%), Positives = 49/85 (57%), Frame = +1 Query: 148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327 +EF LW+ + W+ IF+ Y D+SG I+ E+R+A+ G+ + + ++ +Y D Sbjct: 623 QEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYAD-- 680 Query: 328 GRRVELGFDSFVECGMIIKGLTDKF 402 + + + FDSF+ C + ++G+ F Sbjct: 681 -KHMNIDFDSFICCFVRLEGMFRAF 704 >gi|87013|pir||A34488 calpain (EC 3.4.22.17) heavy chain - human (fragment) Length = 778 Frame 1 hits (HSPs): ______ Annotated Domains: ____________________ ____________ __________________________________________________ Database sequence: | | | | | | | 778 0 150 300 450 600 750 __________________ Annotated Domains: Entrez domain: calpain catalytic domain homolog 56..357 Entrez domain: calmodulin repeat homology #labe 606..637 Entrez domain: calmodulin repeat homology #labe 649..681 Entrez domain: calmodulin repeat homology #labe 682..711 Entrez domain: calmodulin repeat homology #labe 714..746 Entrez domain: calmodulin repeat homology #labe 747..778 Entrez active site: Cys, His, Asn 86 Entrez active site: Cys, His, Asn 291 Entrez active site: Cys, His, Asn 315 PROSITE EF_HAND: EF-hand calcium-binding domain. 662..674 PROSITE EF_HAND: EF-hand calcium-binding domain. 692..704 PROSITE THIOL_PROTEASE_CYS: Eukaryotic thiol (cy 80..91 __________________ Plus Strand HSPs: Score = 129 (45.4 bits), Expect = 0.00025, P = 0.00025 Identities = 25/85 (29%), Positives = 49/85 (57%), Frame = +1 Query: 148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327 +EF LW+ + W+ IF+ Y D+SG I+ E+R+A+ G+ + + ++ +Y D Sbjct: 672 QEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYAD-- 729 Query: 328 GRRVELGFDSFVECGMIIKGLTDKF 402 + + + FDSF+ C + ++G+ F Sbjct: 730 -KHMNIDFDSFICCFVRLEGMFRAF 753 >gi|4704752|gb|AAD28253.1|AF127764_1 (AF127764) calpain 3; calcium activated neutral protease; CAPN3; CL1 [Homo sapiens] Length = 815 Frame 1 hits (HSPs): ______ __________________________________________________ Database sequence: | | | | | | | 815 0 150 300 450 600 750 Plus Strand HSPs: Score = 129 (45.4 bits), Expect = 0.00026, P = 0.00026 Identities = 25/85 (29%), Positives = 49/85 (57%), Frame = +1 Query: 148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327 +EF LW+ + W+ IF+ Y D+SG I+ E+R+A+ G+ + + ++ +Y D Sbjct: 709 QEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYAD-- 766 Query: 328 GRRVELGFDSFVECGMIIKGLTDKF 402 + + + FDSF+ C + ++G+ F Sbjct: 767 -KHMNIDFDSFICCFVRLEGMFRAF 790 >gi|11037484|gb|AAG27599.1|AF277376_1 (AF277376) calpain 3 [Macaca fascicularis] Length = 815 Frame 1 hits (HSPs): ______ __________________________________________________ Database sequence: | | | | | | | 815 0 150 300 450 600 750 Plus Strand HSPs: Score = 129 (45.4 bits), Expect = 0.00026, P = 0.00026 Identities = 25/85 (29%), Positives = 49/85 (57%), Frame = +1 Query: 148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327 +EF LW+ + W+ IF+ Y D+SG I+ E+R+A+ G+ + + ++ +Y D Sbjct: 709 QEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYAD-- 766 Query: 328 GRRVELGFDSFVECGMIIKGLTDKF 402 + + + FDSF+ C + ++G+ F Sbjct: 767 -KHMNIDFDSFICCFVRLEGMFRAF 790 >gi|4557405 ref|NP_000061.1| calpain, large polypeptide L3; p94 [Homo sapiens] >gi|1345664|sp|P20807|CAN3_HUMAN CALPAIN 3 LARGE SUBUNIT (CALPAIN L3) (CALPAIN P94, LARGE [CATALYTIC] SUBUNIT) (CALCIUM-ACTIVATED NEUTRAL PROTEINASE 3) (CANP 3) (MUSCLE-SPECIFIC CALCIUM-ACTIVATED NEUTRAL PROTEASE 3 LARGE SUBUNIT) >gi|1082271|pir||A56218 calpain (EC 3.4.22.17) 3 large chain - human >gi|7428243|pir||CIHUH3 calpain (EC 3.4.22.17) large chain 3 - human >gi|791040|emb|CAA59403.1| (X85030) calpain [Homo sapiens] Length = 821 Frame 1 hits (HSPs): ______ __________________________________________________ Database sequence: | | | | | | | 821 0 150 300 450 600 750 Plus Strand HSPs: Score = 129 (45.4 bits), Expect = 0.00027, P = 0.00027 Identities = 25/85 (29%), Positives = 49/85 (57%), Frame = +1 Query: 148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327 +EF LW+ + W+ IF+ Y D+SG I+ E+R+A+ G+ + + ++ +Y D Sbjct: 715 QEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYAD-- 772 Query: 328 GRRVELGFDSFVECGMIIKGLTDKF 402 + + + FDSF+ C + ++G+ F Sbjct: 773 -KHMNIDFDSFICCFVRLEGMFRAF 796 >gi|12738707 ref|XP_007541.2| calpain, large polypeptide L3 [Homo sapiens] Length = 845 Frame 1 hits (HSPs): ______ __________________________________________________ Database sequence: | | | | | | | 845 0 150 300 450 600 750 Plus Strand HSPs: Score = 129 (45.4 bits), Expect = 0.00028, P = 0.00028 Identities = 25/85 (29%), Positives = 49/85 (57%), Frame = +1 Query: 148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327 +EF LW+ + W+ IF+ Y D+SG I+ E+R+A+ G+ + + ++ +Y D Sbjct: 739 QEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYAD-- 796 Query: 328 GRRVELGFDSFVECGMIIKGLTDKF 402 + + + FDSF+ C + ++G+ F Sbjct: 797 -KHMNIDFDSFICCFVRLEGMFRAF 820 >gi|1628587|gb|AAB17381.1| (U71320) calpain II [Sus scrofa] Length = 203 Frame 1 hits (HSPs): _________________________ __________________________________________________ Database sequence: | | | | || 203 0 50 100 150 200 Plus Strand HSPs: Score = 118 (41.5 bits), Expect = 0.00030, P = 0.00030 Identities = 28/95 (29%), Positives = 53/95 (55%), Frame = +1 Query: 88 GWSVPLC*FQLPV----ACAFTGPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDA 255 G+S+ C + + A G KEF LW+ + ++ I+ DRSG ++ E+R A Sbjct: 74 GFSIETCKIMVDMLDSDGSAKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKA 133 Query: 256 LYGIGYAVPGSVLQLLLSKYGDGSGRRVELGFDSFVEC 369 L G+ +P + Q++++++ D ++ + FD+FV C Sbjct: 134 LEEAGFKLPCQLHQVIVARFADD---QLIIDFDNFVRC 168 >gi|2584822|gb|AAC04848.1| (U96367) calpain Lp82 [Rattus norvegicus] Length = 709 Frame 1 hits (HSPs): _______ __________________________________________________ Database sequence: | | | | | | 709 0 150 300 450 600 Plus Strand HSPs: Score = 127 (44.7 bits), Expect = 0.00037, P = 0.00037 Identities = 25/85 (29%), Positives = 47/85 (55%), Frame = +1 Query: 148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327 +EF LW + W+ IF+ Y D SG I+ E+R+A+ G+ + + ++ +Y D Sbjct: 603 QEFHHLWKKIKAWQKIFKHYDTDHSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYAD-- 660 Query: 328 GRRVELGFDSFVECGMIIKGLTDKF 402 + + + FDSF+ C + ++G+ F Sbjct: 661 -KHMNIDFDSFICCFVRLEGMFRAF 684 >gi|3661585|gb|AAC61764.1| (AF091998) calpain Lp82 [Mus musculus] Length = 709 Frame 1 hits (HSPs): _______ __________________________________________________ Database sequence: | | | | | | 709 0 150 300 450 600 Plus Strand HSPs: Score = 127 (44.7 bits), Expect = 0.00037, P = 0.00037 Identities = 25/85 (29%), Positives = 47/85 (55%), Frame = +1 Query: 148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327 +EF LW + W+ IF+ Y D SG I+ E+R+A+ G+ + + ++ +Y D Sbjct: 603 QEFHHLWKKIKAWQKIFKHYDTDHSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYAD-- 660 Query: 328 GRRVELGFDSFVECGMIIKGLTDKF 402 + + + FDSF+ C + ++G+ F Sbjct: 661 -KHMNIDFDSFICCFVRLEGMFRAF 684 >gi|7674485|gb|AAD28255.2|AF127766_1 (AF127766) calpain 3; calcium activated neutral protease [Mus musculus] Length = 729 Frame 1 hits (HSPs): _______ __________________________________________________ Database sequence: | | | | | | 729 0 150 300 450 600 Plus Strand HSPs: Score = 127 (44.7 bits), Expect = 0.00038, P = 0.00038 Identities = 25/85 (29%), Positives = 47/85 (55%), Frame = +1 Query: 148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327 +EF LW + W+ IF+ Y D SG I+ E+R+A+ G+ + + ++ +Y D Sbjct: 623 QEFHHLWKKIKAWQKIFKHYDTDHSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYAD-- 680 Query: 328 GRRVELGFDSFVECGMIIKGLTDKF 402 + + + FDSF+ C + ++G+ F Sbjct: 681 -KHMNIDFDSFICCFVRLEGMFRAF 704 WARNING: HSPs involving 80 database sequences were not reported due to the limiting value of parameter B = 50. Parameters: filter=none matrix=BLOSUM62 V=50 B=50 E=10 gi H=1 sort_by_pvalue echofilter ctxfactor=5.96 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H Std. 0 BLOSUM62 0.318 0.135 0.401 +3 0 BLOSUM62 0.318 0.135 0.401 0.361 0.161 0.657 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a +2 0 BLOSUM62 0.318 0.135 0.401 0.346 0.154 0.498 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a +1 0 BLOSUM62 0.318 0.135 0.401 0.347 0.159 0.558 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -1 0 BLOSUM62 0.318 0.135 0.401 0.345 0.149 0.496 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -2 0 BLOSUM62 0.318 0.135 0.401 0.355 0.158 0.564 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -3 0 BLOSUM62 0.318 0.135 0.401 0.360 0.161 0.562 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +3 0 272 258 10. 78 3 12 22 0.091 36 32 0.11 39 +2 0 272 260 10. 78 3 12 22 0.092 36 32 0.11 39 +1 0 273 261 10. 78 3 12 22 0.092 36 32 0.11 39 -1 0 273 260 10. 78 3 12 22 0.092 36 32 0.11 39 -2 0 272 257 10. 78 3 12 22 0.12 35 32 0.11 39 -3 0 272 259 10. 78 3 12 22 0.091 36 32 0.11 39 Statistics: Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr Title: nr Release date: unknown Posted date: 4:06 PM CST Feb 28, 2001 Format: BLAST # of letters in database: 197,782,623 # of sequences in database: 625,274 # of database sequences satisfying E: 130 No. of states in DFA: 599 (59 KB) Total size of DFA: 262 KB (320 KB) Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00 No. of threads or processors used: 6 Search cpu time: 243.94u 0.88s 244.82t Elapsed: 00:01:20 Total cpu time: 244.00u 0.91s 244.91t Elapsed: 00:01:20 Start: Mon Oct 1 17:02:13 2001 End: Mon Oct 1 17:03:33 2001 WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000