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BLASTX+BEAUTY Search Results

WU-BLAST 2.0 search of the National Center for Biotechnology Information's NR Protein Database.

BEAUTY post-processing provided by the Human Genome Sequencing Center, Baylor College of Medicine.

BEAUTY Reference:
Worley KC, Culpepper P, Wiese BA, Smith RF. BEAUTY-X: enhanced BLAST searches for DNA queries. Bioinformatics 1998;14(10):890-1. Abstract

Worley KC, Wiese BA, Smith RF. BEAUTY: an enhanced BLAST-based search tool that integrates multiple biological information resources into sequence similarity search results. Genome Res 1995 Sep;5(2):173-84 Abstract



RepeatMasker repeats found in sequence:

No Repeats Found.

Reference:  Gish, Warren (1994-1997).  unpublished.
Gish, Warren and David J. States (1993).  Identification of protein coding
regions by database similarity search.  Nat. Genet. 3:266-72.

Notice: statistical significance is estimated under the assumption that the equivalent of one entire reading frame in the query sequence codes for protein and that significant alignments will involve only coding reading frames.

Query= A01D23_CONSENSUS (819 letters)

  Translating both strands of query sequence in all 6 reading frames

Database: nr 625,274 sequences; 197,782,623 total letters.



     Observed Numbers of Database Sequences Satisfying
    Various EXPECTation Thresholds (E parameter values)

        Histogram units:      = 3 Sequences     : less than 3 sequences

 EXPECTation Threshold
 (E parameter)
    |
    V   Observed Counts-->
  10000 861 156 |====================================================
   6310 705 100 |=================================
   3980 605 142 |===============================================
   2510 463  83 |===========================
   1580 380  55 |==================
   1000 325  60 |====================
    631 265  39 |=============
    398 226  44 |==============
    251 182  20 |======
    158 162  14 |====
    100 148   7 |==
   63.1 141   2 |:
   39.8 139   3 |=
   25.1 136   5 |=
   15.8 131   1 |:
 >>>>>>>>>>>>>>>>>>>>>  Expect = 10.0, Observed = 130  <<<<<<<<<<<<<<<<<
   10.0 130   9 |===
   6.31 121   1 |:
   3.98 120   3 |=
   2.51 117   5 |=
   1.58 112   4 |=
   1.00 108   2 |:
   0.63 106   0 |
   0.40 106   3 |=
   0.25 103   2 |:
   0.16 101   6 |==
   0.10  95   5 |=
  0.063  90   3 |=
  0.040  87   2 |:
  0.025  85   1 |:
  0.016  84   1 |:
  0.010  83   2 |:
 0.0063  81   3 |=
 0.0040  78   4 |=
 0.0025  74  10 |===
 0.0016  64   1 |:


                                                                     Smallest
                                                                       Sum
                                                     Reading  High  Probability
Sequences producing High-scoring Segment Pairs:        Frame Score  P(N)      N
gi|4314390|gb|AAD15600.1|(AC006232) putative Ca2+-bin... +1   305  3.6e-26   1
gi|6624721|emb|CAB63845.1|(AJ251828) putative cystein... +1   270  1.8e-22   1
gi|9955572|emb|CAC05499.1|(AL391716) EF-hand Calcium ... +1   258  3.4e-21   1
gi|6056209|gb|AAF02826.1|AC009400_22(AC009400) unknow... +1   202  4.9e-15   1
gi|90342|pir||S04970calcium-binding protein (clone pM... +1   155  1.1e-12   2
gi|6755000ref|NP_035181.1| programmed cell death 6 [M... +1   155  1.1e-12   2
gi|7019485ref|NP_037364.1| programmed cell death 6 [H... +1   155  1.1e-12   2
gi|12731702ref|XP_004040.2| programmed cell death 6 [... +1   155  1.1e-12   2
gi|6912582ref|NP_036524.1| peflin [Homo sapiens] >gi|... +1   144  2.8e-09   2
gi|4507207ref|NP_003121.1| sorcin; Sorcin (class 4 ge... +1   139  5.8e-09   2
gi|1587138|prf||2206278Asorcin [Homo sapiens]            +1   139  5.8e-09   2
gi|134734|sp|P05044|SORC_CRILOSORCIN (22 KD PROTEIN) ... +1   145  6.2e-09   1
gi|7289349|gb|AAF45393.1|(AE003000) CG17661 gene prod... +1   146  1.0e-07   1
gi|3212434|pdb|1AJ5|AChain A, Calpain Domain Vi Apo >... +1   130  3.1e-07   1
gi|3024652|sp|Q94743|SORC_SCHJASORCIN >gi|1655733|gb|... +1   128  5.3e-07   1
gi|5051921|gb|AAD38363.1|(AF139373) calpain small sub... +1   124  1.5e-06   1
gi|10835527|pdb|1F4O|AChain A, Crystal Structure Of G... +1   124  1.5e-06   1
gi|2493454|sp|Q64537|CANS_RATCALCIUM-DEPENDENT PROTEA... +1   130  2.2e-06   1
gi|3212511|pdb|1DVI|AChain A, Calpain Domain Vi With ... +1   130  2.2e-06   1
gi|1079058|pir||A55054calpain (EC 3.4.22.17) large ch... +1   143  6.4e-06   1
gi|1705574|sp|Q11002|CAN_DROMECALPAIN (CALCIUM-ACTIVA... +1   143  6.7e-06   1
gi|600420|emb|CAA86993.1|(Z46891) Calpain [Drosophila... +1   143  6.7e-06   1
gi|7302479|gb|AAF57563.1|(AE003796) CalpA gene produc... +1   143  6.7e-06   1
gi|2506056|dbj|BAA22638.1|(AB007824) calpain small su... +1   130  1.2e-05   1
gi|6980466|pdb|1DKV|BChain B, The Crystal Structure O... +1   124  2.2e-05   1
gi|1794205|gb|AAC53002.1|(U53859) calpain small subun... +1   130  2.8e-05   1
gi|2358260|gb|AAB69114.1|(U89513) calpain large subun... +1   136  3.3e-05   1
gi|3820523|gb|AAD04331.1|(AF062404) calpain [Drosophi... +1   136  4.0e-05   1
gi|7294858|gb|AAF50189.1|(AE003550) CalpB gene produc... +1   136  4.0e-05   1
gi|3319068|pdb|1ALV|AChain A, Calcium Bound Domain Vi... +1   120  4.2e-05   1
gi|6753256ref|NP_033925.1| calpain 4 [Mus musculus] >... +1   128  5.0e-05   1
gi|11422561ref|XP_001446.1| GC36 protein [Homo sapiens]  +1   131  9.6e-05   1
gi|4960061|gb|AAD34601.1|(AF148956) lens-specific cal... +1   132  0.00010   1
gi|11422559ref|XP_001445.1| calpain 9 (nCL-4) [Homo s... +1   131  0.00010   1
gi|7705383ref|NP_057536.1| GC36 protein [Homo sapiens... +1   131  0.00012   1
gi|5729758ref|NP_006606.1| calpain 9 (nCL-4) [Homo sa... +1   131  0.00012   1
gi|6912388ref|NP_036330.1| grancalcin [Homo sapiens] ... +1   122  0.00013   1
gi|4960059|gb|AAD34600.1|(AF148955) lens-specific cal... +1   131  0.00013   1
gi|4502565ref|NP_001740.1| calpain 4 small subunit; c... +1   124  0.00015   1
gi|11428473ref|XP_002208.1| grancalcin [Homo sapiens]    +1   122  0.00023   1
gi|7684607|gb|AAD28254.3|AF127765_1(AF127765) calpain... +1   129  0.00023   1
gi|87013|pir||A34488calpain (EC 3.4.22.17) heavy chai... +1   129  0.00025   1
gi|4704752|gb|AAD28253.1|AF127764_1(AF127764) calpain... +1   129  0.00026   1
gi|11037484|gb|AAG27599.1|AF277376_1(AF277376) calpai... +1   129  0.00026   1
gi|4557405ref|NP_000061.1| calpain, large polypeptide... +1   129  0.00027   1
gi|12738707ref|XP_007541.2| calpain, large polypeptid... +1   129  0.00028   1
gi|1628587|gb|AAB17381.1|(U71320) calpain II [Sus scr... +1   118  0.00030   1
gi|2584822|gb|AAC04848.1|(U96367) calpain Lp82 [Rattu... +1   127  0.00037   1
gi|3661585|gb|AAC61764.1|(AF091998) calpain Lp82 [Mus... +1   127  0.00037   1
gi|7674485|gb|AAD28255.2|AF127766_1(AF127766) calpain... +1   127  0.00038   1



Locally-aligned regions (HSPs) with respect to query sequence:

Locus_ID                Frame 2 Hits
gi|4314390             |                        _______                   
gi|9955572             |                        ______                    
gi|90342               |                        _____                     
gi|6755000             |                        _____                     
gi|7019485             |                        _____                     
gi|12731702            |                        _____                     
gi|6912582             |                        _____                     
gi|4507207             |                        _____                     
gi|1587138             |                        _____                     
Prosite Hits:                                              __             
                        __________________________________________________
Query sequence:        |        |         |        |        |        |    | 273
                       0       50       100      150      200      250
__________________
Prosite hits:
   TYR_PHOSPHO_SITE     Tyrosine kinase phosphorylation site.    195..201
__________________


Locus_ID                Frame 1 Hits
gi|4314390             |        ___________________                       
gi|6624721             |        ____________________                      
gi|9955572             |        ___________________                       
gi|6056209             |        _______________                           
gi|90342               |         ________________                         
gi|6755000             |         ________________                         
gi|7019485             |         ________________                         
gi|12731702            |         ________________                         
gi|6912582             |         __________________                       
gi|4507207             |        _________________                         
gi|1587138             |        _________________                         
gi|134734              |        ____________________                      
gi|7289349             |        ________________                          
gi|3212434             |        _______________                           
gi|3024652             |         __________________                       
gi|5051921             |        _______________                           
gi|10835527            |        ____________________                      
gi|2493454             |        _______________                           
gi|3212511             |        _______________                           
gi|1079058             |        _________________                         
gi|1705574             |        _________________                         
gi|600420              |        _________________                         
gi|7302479             |        _________________                         
gi|2506056             |        _________________                         
gi|6980466             |        _________________                         
gi|1794205             |        _______________                           
gi|2358260             |        _______________                           
gi|3820523             |        _________________                         
gi|7294858             |        _________________                         
gi|3319068             |        _________________                         
gi|6753256             |        _________________                         
gi|11422561            |         ______________                           
gi|4960061             |        _________________                         
gi|11422559            |         ______________                           
gi|7705383             |         ______________                           
gi|5729758             |         ______________                           
gi|6912388             |        ____________________                      
gi|4960059             |        _________________                         
gi|4502565             |        _________________                         
gi|11428473            |        ____________________                      
gi|7684607             |        _________________                         
gi|87013               |        _________________                         
gi|4704752             |        _________________                         
gi|11037484            |        _________________                         
gi|4557405             |        _________________                         
gi|12738707            |        _________________                         
gi|1628587             |     __________________                           
gi|2584822             |        _________________                         
gi|3661585             |        _________________                         
gi|7674485             |        _________________                         
                        __________________________________________________
Query sequence:        |        |         |        |        |        |    | 273
                       0       50       100      150      200      250

Use the and icons to retrieve links to Entrez:

E = Retrieve Entrez links (e.g., Medline abstracts, FASTA-formatted sequence reports).
R = Retrieve links to Related sequences (neighbors).
Use the icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the icon (if present) to retrieve links to the Protein Data Bank database.

WARNING:  Descriptions of 80 database sequences were not reported due to the
          limiting value of parameter V = 50.



to_Entrezto_Relatedto_Related >gi|4314390|gb|AAD15600.1|  (AC006232) putative Ca2+-binding protein
            [Arabidopsis thaliana]
            Length = 186

Frame  2 hits (HSPs):                                            _________
Frame  1 hits (HSPs):      ____________   ____________________________    
                        __________________________________________________
Database sequence:     |             |            |             |         | 186
                       0            50          100           150

  Plus Strand HSPs:

 Score = 305 (107.4 bits), Expect = 3.6e-26, P = 3.6e-26
 Identities = 56/101 (55%), Positives = 75/101 (74%), Frame = +1

Query:   145 PKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDG 324
             PKE+  LW+CL  WR IF RY +DRSGK++  +LRDA Y +G  +P SV QL++S++ DG
Sbjct:    71 PKEYVELWNCLAQWRAIFNRYDRDRSGKMNSTQLRDAFYNLGCVLPTSVHQLIVSQFDDG 130

Query:   325 SGRRVELGFDSFVECGMIIKGLTDKFKGE--GYTVYG-FSY 438
             +G+ V+L FDSF+ECGMI+KGLT+KF+    GYT Y   SY
Sbjct:   131 TGKTVDLCFDSFLECGMIVKGLTEKFRENDPGYTGYATLSY 171

 Score = 109 (38.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
 Identities = 20/30 (66%), Positives = 23/30 (76%), Frame = +2

Query:   404 REKDTRYTGSATLSYDAFMTMVLPFLVSYD 493
             RE D  YTG ATLSYD FM MV+PF+ +YD
Sbjct:   157 RENDPGYTGYATLSYDVFMLMVIPFIATYD 186

 Score = 59 (20.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
 Identities = 16/41 (39%), Positives = 23/41 (56%), Frame = +1

Query:   196 FERYXKDRSGKIDPLELRDALYGIGY-AVPGSVLQLLLSKY 315
             FE   ++RSG ++  ELR AL   GY  +    ++LLL  Y
Sbjct:    14 FESADRNRSGFLEESELRQALSLSGYDGISNRTIRLLLFIY 54


to_Entrezto_Relatedto_Related >gi|6624721|emb|CAB63845.1|  (AJ251828) putative cysteine protease [Pisum
            sativum]
            Length = 286

Frame  1 hits (HSPs):                                  ___________________
                        __________________________________________________
Database sequence:     |        |        |        |       |        |      | 286
                       0       50      100      150     200      250

  Plus Strand HSPs:

 Score = 270 (95.0 bits), Expect = 1.8e-22, P = 1.8e-22
 Identities = 53/105 (50%), Positives = 72/105 (68%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             GPKEF +L+  L  WRGIFER+ KDRSG+ID  ELRDAL  +GYAV  +VL LL+SK+  
Sbjct:   181 GPKEFTSLFYSLQSWRGIFERFDKDRSGQIDSNELRDALLSLGYAVSPTVLDLLVSKFDK 240

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFKGEGYTVYGFSYTFIRRL 456
               G+   + +D+F+EC + +KGLTDKFK +   +    +  +RRL
Sbjct:   241 TGGKHKAVEYDNFIECCLTVKGLTDKFKEKDTGILALQHFPMRRL 285


to_Entrezto_Relatedto_Related >gi|9955572|emb|CAC05499.1|  (AL391716) EF-hand Calcium binding protein-like
            [Arabidopsis thaliana]
            Length = 354

Frame  2 hits (HSPs):                                                 ____
Frame  1 hits (HSPs):                                    _______________  
                        __________________________________________________
Database sequence:     |                     |                    |       | 354
                       0                   150                  300

  Plus Strand HSPs:

 Score = 258 (90.8 bits), Expect = 3.4e-21, P = 3.4e-21
 Identities = 53/101 (52%), Positives = 69/101 (68%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             GPKEF AL+  L +WR IFER  KDRSG+ID  ELRDAL  +G++V   VL LL+SK+  
Sbjct:   240 GPKEFTALFYSLQNWRSIFERSDKDRSGRIDVNELRDALLSLGFSVSPVVLDLLVSKFDK 299

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFKGEGYTVYGFSYTF 444
               G+   + +D+F+EC + +KGLT+KFK E  T Y  S TF
Sbjct:   300 SGGKNRAIEYDNFIECCLTVKGLTEKFK-EKDTAYSGSATF 339

 Score = 98 (34.5 bits), Expect = 0.26, P = 0.23
 Identities = 17/28 (60%), Positives = 24/28 (85%), Frame = +2

Query:   404 REKDTRYTGSATLSYDAFMTMVLPFLVS 487
             +EKDT Y+GSAT +Y++FM  VLPFL++
Sbjct:   327 KEKDTAYSGSATFNYESFMLTVLPFLIA 354


to_Entrezto_Relatedto_Related >gi|6056209|gb|AAF02826.1|AC009400_22  (AC009400) unknown protein [Arabidopsis
            thaliana]
            Length = 330

Frame  1 hits (HSPs):                                    ____________     
                        __________________________________________________
Database sequence:     |                      |                      |    | 330
                       0                    150                    300

  Plus Strand HSPs:

 Score = 202 (71.1 bits), Expect = 4.9e-15, P = 4.9e-15
 Identities = 38/75 (50%), Positives = 53/75 (70%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             GPKEF +L+  L +WR IFER+ KDRSG+ID  ELRDAL  +G++V   +L LL+SK+  
Sbjct:   221 GPKEFTSLFFSLQNWRSIFERFDKDRSGRIDTNELRDALMSLGFSVSPVILDLLVSKFDK 280

Query:   322 GSGRRVELGFDSFVE 366
               GR   + +D+F+E
Sbjct:   281 SGGRNRAIEYDNFIE 295


to_Entrezto_Relatedto_Related >gi|90342|pir||S04970  calcium-binding protein (clone pMP41) - mouse (fragment)
            >gi|50266|emb|CAA33064.1| (X14938) put. calcium-binding protein
            (153 AA, C-term.) [Mus musculus]
            Length = 153

Frame  2 hits (HSPs):                                            ________ 
Frame  1 hits (HSPs):                 ____________________________        
Annotated Domains:            ____________  _____                         
                        __________________________________________________
Database sequence:     |                |               |               | | 153
                       0               50             100             150
__________________

Annotated Domains:
   Entrez               domain: calmodulin repeat homology #labe 22..54
   PROSITE              EF_HAND: EF-hand calcium-binding domain. 65..77
__________________


  Plus Strand HSPs:

 Score = 155 (54.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 30/85 (35%), Positives = 49/85 (57%), Frame = +1

Query:   151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330
             EF  +W  +  W+ +F  Y +D SG ID  EL+ AL G GY +      +L+ K+ D  G
Sbjct:    46 EFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF-DRQG 104

Query:   331 RRVELGFDSFVECGMIIKGLTDKFK 405
             R  ++ FD F++  ++++ LTD F+
Sbjct:   105 RG-QIAFDDFIQGCIVLQRLTDIFR 128

 Score = 39 (13.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 8/22 (36%), Positives = 13/22 (59%), Frame = +2

Query:   404 REKDTRYTGSATLSYDAFMTMV 469
             R  DT   G   +SY+ +++MV
Sbjct:   128 RRYDTDQDGWIQVSYEQYLSMV 149


to_Entrezto_Related >gi|6755000  ref|NP_035181.1| programmed cell death 6 [Mus musculus]
            >gi|2506252|sp|P12815|PCD6_MOUSE PROGRAMED CELL DEATH PROTEIN 6
            (PROBABLE CALCIUM-BINDING PROTEIN ALG-2) (PMP41) (ALG-257)
            >gi|1213520|gb|AAB38108.1| (U49112) ALG-2 [Mus musculus]
            Length = 191

Frame  2 hits (HSPs):                                              ______ 
Frame  1 hits (HSPs):                        _______________________      
                        __________________________________________________
Database sequence:     |            |            |             |          | 191
                       0           50          100           150

  Plus Strand HSPs:

 Score = 155 (54.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 30/85 (35%), Positives = 49/85 (57%), Frame = +1

Query:   151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330
             EF  +W  +  W+ +F  Y +D SG ID  EL+ AL G GY +      +L+ K+ D  G
Sbjct:    84 EFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF-DRQG 142

Query:   331 RRVELGFDSFVECGMIIKGLTDKFK 405
             R  ++ FD F++  ++++ LTD F+
Sbjct:   143 RG-QIAFDDFIQGCIVLQRLTDIFR 166

 Score = 39 (13.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 8/22 (36%), Positives = 13/22 (59%), Frame = +2

Query:   404 REKDTRYTGSATLSYDAFMTMV 469
             R  DT   G   +SY+ +++MV
Sbjct:   166 RRYDTDQDGWIQVSYEQYLSMV 187


to_Entrezto_Related >gi|7019485  ref|NP_037364.1| programmed cell death 6 [Homo sapiens]
            >gi|12230420|sp|O75340|PCD6_HUMAN PROGRAMED CELL DEATH PROTEIN 6
            (PROBABLE CALCIUM-BINDING PROTEIN ALG-2) >gi|3342794|gb|AAC27697.1|
            (AF035606) calcium binding protein [Homo sapiens]
            >gi|6502505|gb|AAF14336.1|U58773_1 (U58773) calcium binding protein
            [Homo sapiens]
            Length = 191

Frame  2 hits (HSPs):                                              ______ 
Frame  1 hits (HSPs):                        _______________________      
                        __________________________________________________
Database sequence:     |            |            |             |          | 191
                       0           50          100           150

  Plus Strand HSPs:

 Score = 155 (54.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 30/85 (35%), Positives = 49/85 (57%), Frame = +1

Query:   151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330
             EF  +W  +  W+ +F  Y +D SG ID  EL+ AL G GY +      +L+ K+ D  G
Sbjct:    84 EFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF-DRQG 142

Query:   331 RRVELGFDSFVECGMIIKGLTDKFK 405
             R  ++ FD F++  ++++ LTD F+
Sbjct:   143 RG-QIAFDDFIQGCIVLQRLTDIFR 166

 Score = 39 (13.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 8/22 (36%), Positives = 13/22 (59%), Frame = +2

Query:   404 REKDTRYTGSATLSYDAFMTMV 469
             R  DT   G   +SY+ +++MV
Sbjct:   166 RRYDTDQDGWIQVSYEQYLSMV 187


to_Entrezto_Related >gi|12731702  ref|XP_004040.2| programmed cell death 6 [Homo sapiens]
            Length = 201

Frame  2 hits (HSPs):                                              ______ 
Frame  1 hits (HSPs):                          _____________________      
                        __________________________________________________
Database sequence:     |            |           |            |           || 201
                       0           50         100          150         200

  Plus Strand HSPs:

 Score = 155 (54.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 30/85 (35%), Positives = 49/85 (57%), Frame = +1

Query:   151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330
             EF  +W  +  W+ +F  Y +D SG ID  EL+ AL G GY +      +L+ K+ D  G
Sbjct:    94 EFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF-DRQG 152

Query:   331 RRVELGFDSFVECGMIIKGLTDKFK 405
             R  ++ FD F++  ++++ LTD F+
Sbjct:   153 RG-QIAFDDFIQGCIVLQRLTDIFR 176

 Score = 39 (13.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 8/22 (36%), Positives = 13/22 (59%), Frame = +2

Query:   404 REKDTRYTGSATLSYDAFMTMV 469
             R  DT   G   +SY+ +++MV
Sbjct:   176 RRYDTDQDGWIQVSYEQYLSMV 197


to_Entrezto_Related >gi|6912582  ref|NP_036524.1| peflin [Homo sapiens] >gi|6009487|dbj|BAA84922.1|
            (AB018357) ABP32 [Homo sapiens] >gi|6015440|dbj|BAA85163.1|
            (AB026628) peflin [Homo sapiens] >gi|7022666|dbj|BAA91680.1|
            (AK001420) unnamed protein product [Homo sapiens]
            Length = 284

Frame  2 hits (HSPs):                                                ____ 
Frame  1 hits (HSPs):                                 _________________   
                        __________________________________________________
Database sequence:     |        |        |        |        |       |      | 284
                       0       50      100      150      200     250

  Plus Strand HSPs:

 Score = 144 (50.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 31/92 (33%), Positives = 51/92 (55%), Frame = +1

Query:   154 FAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSGR 333
             F+ALW  +  W+ +F++Y +DRSG I   EL+ AL  +GY +     QLL+S+Y   S  
Sbjct:   176 FSALWKFIQQWKNLFQQYDRDRSGSISYTELQQALSQMGYNLSPQFTQLLVSRYCPRSAN 235

Query:   334 RVELGFDSFVECGMIIKGLTDKFKGEGYTVYG 429
                +  D F++    ++ LT+ F+ +   V G
Sbjct:   236 PA-MQLDRFIQVCTQLQVLTEAFREKDTAVQG 266

 Score = 56 (19.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 11/21 (52%), Positives = 15/21 (71%), Frame = +2

Query:   404 REKDTRYTGSATLSYDAFMTM 466
             REKDT   G+  LS++ F+TM
Sbjct:   258 REKDTAVQGNIRLSFEDFVTM 278


to_Entrezto_Related >gi|4507207  ref|NP_003121.1| sorcin; Sorcin (class 4 gene) [Homo sapiens]
            >gi|11419205 ref|XP_004593.1| sorcin [Homo sapiens]
            >gi|267021|sp|P30626|SORC_HUMAN SORCIN (22 KD PROTEIN) (CP-22)
            (V19) >gi|1082793|pir||S52094 sorcin - human
            >gi|2136183|pir||S68369 sorcin - human >gi|338482|gb|AAA60588.1|
            (M32886) sorcin CP-22 [Homo sapiens] >gi|459836|gb|AAA92155.1|
            (L12387) sorcin [Homo sapiens] >gi|1094394|prf||2106141A sorcin
            [Homo sapiens]
            Length = 198

Frame  2 hits (HSPs):                                              _______
Frame  1 hits (HSPs):                         ______________________      
                        __________________________________________________
Database sequence:     |            |           |            |            | 198
                       0           50         100          150

  Plus Strand HSPs:

 Score = 139 (48.9 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
 Identities = 29/88 (32%), Positives = 48/88 (54%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G  EF  LW+ L  WR  F  +  DRSG +DP EL+ AL  +G+ +    +  +  +Y  
Sbjct:    91 GFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYST 150

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405
              +G+   + FD ++ C + ++ LTD F+
Sbjct:   151 -NGK---ITFDDYIACCVKLRALTDSFR 174

 Score = 40 (14.1 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
 Identities = 8/23 (34%), Positives = 11/23 (47%), Frame = +2

Query:   404 REKDTRYTGSATLSYDAFMTMVL 472
             R +DT   G     YD F+  V+
Sbjct:   174 RRRDTAQQGVVNFPYDDFIQCVM 196


to_Entrezto_Related >gi|1587138|prf||2206278A  sorcin [Homo sapiens]
            Length = 198

Frame  2 hits (HSPs):                                              _______
Frame  1 hits (HSPs):                         ______________________      
                        __________________________________________________
Database sequence:     |            |           |            |            | 198
                       0           50         100          150

  Plus Strand HSPs:

 Score = 139 (48.9 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
 Identities = 29/88 (32%), Positives = 48/88 (54%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G  EF  LW+ L  WR  F  +  DRSG +DP EL+ AL  +G+ +    +  +  +Y  
Sbjct:    91 GFNEFCELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIACRYST 150

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405
              +G+   + FD ++ C + ++ LTD F+
Sbjct:   151 -NGK---ITFDDYIACCVKLRALTDSFR 174

 Score = 40 (14.1 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
 Identities = 8/23 (34%), Positives = 11/23 (47%), Frame = +2

Query:   404 REKDTRYTGSATLSYDAFMTMVL 472
             R +DT   G     YD F+  V+
Sbjct:   174 RRRDTAQQGVVNFPYDDFIQCVM 196


to_Entrezto_Relatedto_Related >gi|134734|sp|P05044|SORC_CRILO  SORCIN (22 KD PROTEIN) (CP-22) (V19)
            >gi|90213|pir||A25706 sorcin - Chinese hamster
            >gi|49528|emb|CAA28354.1| (X04656) 22-kd protein (AA 1-198)
            [Cricetulus longicaudatus]
            Length = 198

Frame  1 hits (HSPs):                         ___________________________ 
Annotated Domains:        ________________________________________________
                        __________________________________________________
Database sequence:     |            |           |            |            | 198
                       0           50         100          150
__________________

Annotated Domains:
   BLOCKS               BL00018: EF-hand calcium-binding domain  83..95
   DOMO                 DM01246: CALPAINCATALYTICDOMAIN          12..51
   DOMO                 DM00011: CALMODULINREPEAT                52..95
   DOMO                 DM01221: CALPAINCATALYTICDOMAIN          97..196
   Entrez               Calcium binding region: SITE 1 (POTENTIA 83..94
   Entrez               Calcium binding region: SITE 2 (POTENTIA 113..124
   Entrez               Domain: ANCESTRAL CALCIUM SITE 3 (POTENT 148..158
   Entrez               Domain: ANCESTRAL CALCIUM SITE 4 (POTENT 177..190
   PFAM                 efhand: EF hand                          74..102
   PFAM                 efhand: EF hand                          104..132
   PRODOM               PD003609: CAN2(4) CANS(4) SORC(2)        27..107
   PRODOM               PD000012: CALM(76) PRVA(15) PRVB(14)     109..160
   PRODOM               PD018845: SORC(2) GRAN(1)                162..197
   PROSITE              EF_HAND: EF-hand calcium-binding domain. 113..125
   PROSITE              EF_HAND: EF-hand calcium-binding domain. 83..95
__________________


  Plus Strand HSPs:

 Score = 145 (51.0 bits), Expect = 6.2e-09, P = 6.2e-09
 Identities = 36/103 (34%), Positives = 55/103 (53%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G  EF  LW+ L  WR  F  +  DRSG +DP EL+ AL  +G+ +    +  +  +Y  
Sbjct:    91 GFNEFKELWAVLNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYST 150

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFKGEGYTVYG---FSYT-FIR 450
              SG+   + FD ++ C + ++ LTD F+       G   FSY  FI+
Sbjct:   151 -SGK---ITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYDDFIQ 193


to_Entrezto_Relatedto_Related >gi|7289349|gb|AAF45393.1|  (AE003000) CG17661 gene product [Drosophila
            melanogaster]
            Length = 219

Frame  1 hits (HSPs):                  __________________                 
                        __________________________________________________
Database sequence:     |           |          |           |          |    | 219
                       0          50        100         150        200

  Plus Strand HSPs:

 Score = 146 (51.4 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 29/78 (37%), Positives = 45/78 (57%), Frame = +1

Query:   148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327
             K+F ALW  +  W+  F  + +D SG ID  EL+ AL   GY +   ++ +LL K+ D  
Sbjct:    69 KDFGALWKYVTDWQNCFRSFDRDNSGNIDKTELKTALTSFGYRLSDHLIDVLLRKF-DRF 127

Query:   328 GRRVELGFDSFVECGMII 381
             GR   L FD F++C +++
Sbjct:   128 GRGTIL-FDDFIQCCIVL 144


to_Entrezto_Relatedto_Relatedto_pdb >gi|3212434|pdb|1AJ5|A  Chain A, Calpain Domain Vi Apo >gi|3212435|pdb|1AJ5|B
            Chain B, Calpain Domain Vi Apo
            Length = 173

Frame  1 hits (HSPs):                     ______________________          
                        __________________________________________________
Database sequence:     |              |             |              |      | 173
                       0             50           100            150

  Plus Strand HSPs:

 Score = 130 (45.8 bits), Expect = 3.1e-07, P = 3.1e-07
 Identities = 25/76 (32%), Positives = 43/76 (56%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G +EF  LW+ +  W+GI++R+  DRSG I   EL  A    G+ +   +  +++ +Y D
Sbjct:    65 GFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSD 124

Query:   322 GSGRRVELGFDSFVEC 369
              +G    + FD+F+ C
Sbjct:   125 ETGN---MDFDNFISC 137


to_Entrezto_Relatedto_Related >gi|3024652|sp|Q94743|SORC_SCHJA  SORCIN >gi|1655733|gb|AAB17908.1| (U39069)
            sorcin [Schistosoma japonicum]
            Length = 171

Frame  1 hits (HSPs):                     _____________________________   
Annotated Domains:       _________________________________________________
                        __________________________________________________
Database sequence:     |              |             |              |      | 171
                       0             50           100            150
__________________

Annotated Domains:
   BLOCKS               BL00018: EF-hand calcium-binding domain  53..65
   Entrez               Calcium binding region: POTENTIAL.       16..27
   Entrez               Calcium binding region: POTENTIAL.       53..64
   Entrez               Calcium binding region: POTENTIAL.       83..94
   PFAM                 efhand: EF hand                          7..35
   PFAM                 efhand: EF hand                          44..72
   PFAM                 efhand: EF hand                          74..102
   PRODOM               PD000012: CALM(76) PRVA(15) PRVB(14)     6..65
   PRODOM               PD000012: CALM(76) PRVA(15) PRVB(14)     79..130
   PRODOM               PD048635: SORC_SCHJA                     132..170
   PROSITE              EF_HAND: EF-hand calcium-binding domain. 16..28
   PROSITE              EF_HAND: EF-hand calcium-binding domain. 53..65
   PROSITE              EF_HAND: EF-hand calcium-binding domain. 83..95
   PROSITE              LEUCINE_ZIPPER: Leucine zipper pattern.  92..113
__________________


  Plus Strand HSPs:

 Score = 128 (45.1 bits), Expect = 5.3e-07, P = 5.3e-07
 Identities = 30/96 (31%), Positives = 50/96 (52%), Frame = +1

Query:   151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330
             EF  L+  +  W+  F RY +D SG ID  E  +AL   GY +    + L++ ++    G
Sbjct:    64 EFLGLFKYVQDWQTCFRRYDRDNSGSIDLNEFSNALISFGYHLSPQFVNLMMRRFDRNRG 123

Query:   331 RRVELGFDSFVECGMIIKGLTDKF-----KGEGYTVYGF 432
                 + FD F+   + ++ LT +F     +G G+TV+ F
Sbjct:   124 ---SIAFDDFIYACVCLQTLTREFSRYDCRGIGHTVFSF 159


to_Entrezto_Relatedto_Related >gi|5051921|gb|AAD38363.1|  (AF139373) calpain small subunit [Mus musculus]
            Length = 170

Frame  1 hits (HSPs):                             ______________________  
                        __________________________________________________
Database sequence:     |              |              |             |      | 170
                       0             50            100           150

  Plus Strand HSPs:

 Score = 124 (43.7 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 25/76 (32%), Positives = 42/76 (55%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G +EF  LW+ +  W+ I++R+  DRSG I   EL  A    G+ +   +  +++ +Y D
Sbjct:    90 GFEEFKYLWNNIKKWQAIYKRFDTDRSGTIASHELPGAFEAAGFHLNEHLYSMIIRRYAD 149

Query:   322 GSGRRVELGFDSFVEC 369
              SG    + FD+F+ C
Sbjct:   150 ESGN---MDFDNFISC 162


to_Entrezto_Related >gi|10835527|pdb|1F4O|A  Chain A, Crystal Structure Of Grancalcin With Bound
            Calcium >gi|10835528|pdb|1F4O|B Chain B, Crystal Structure Of
            Grancalcin With Bound Calcium >gi|10835529|pdb|1F4Q|A Chain A,
            Crystal Structure Of Apo Grancalcin >gi|10835530|pdb|1F4Q|B Chain
            B, Crystal Structure Of Apo Grancalcin
            Length = 165

Frame  1 hits (HSPs):                    ______________________________   
                        __________________________________________________
Database sequence:     |              |               |              |    | 165
                       0             50             100            150

  Plus Strand HSPs:

 Score = 124 (43.7 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 33/102 (32%), Positives = 51/102 (50%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G   F  LW+ L  W+  F    +D SG ++  ELR A+  +GY +    L  ++ +Y  
Sbjct:    58 GFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK 117

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFKGEGYTVYGFSYTFI 447
              +GR   + FD +V C + ++ LTD FK   +   G S  FI
Sbjct:   118 -NGR---IFFDDYVACCVKLRALTDFFKKRDHLQQG-SADFI 154


to_Entrezto_Relatedto_Related >gi|2493454|sp|Q64537|CANS_RAT  CALCIUM-DEPENDENT PROTEASE, SMALL SUBUNIT
            (CALPAIN REGULATORY SUBUNIT) (CALCIUM-ACTIVATED NEUTRAL PROTEINASE)
            (CANP) >gi|1083614|pir||A55143 calpain (EC 3.4.22.17) light chain -
            rat (fragment) >gi|9257038|pdb|1DF0|B Chain B, Crystal Structure Of
            M-Calpain >gi|505658|gb|AAA64828.1| (U10861) calpain small subunit
            [Rattus norvegicus]
            Length = 184

Frame  1 hits (HSPs):                       ____________________          
Annotated Domains:        ________________________________________________
                        __________________________________________________
Database sequence:     |             |            |             |         | 184
                       0            50          100           150
__________________

Annotated Domains:
   Entrez               Domain: CALCIUM-BINDING.                 12..184
   Entrez               Calcium binding region: SITE 1 (POTENTIA 68..79
   Entrez               Calcium binding region: SITE 2 (POTENTIA 98..109
   Entrez               Domain: ANCESTRAL CALCIUM SITE 3 (POTENT 133..144
   Entrez               Domain: ANCESTRAL CALCIUM SITE 4 (POTENT 163..176
   PFAM                 efhand: EF hand                          59..87
   PFAM                 efhand: EF hand                          89..117
   PFAM                 efhand: EF hand                          154..184
   PROSITE              EF_HAND: EF-hand calcium-binding domain. 68..80
   PROSITE              EF_HAND: EF-hand calcium-binding domain. 98..110
__________________


  Plus Strand HSPs:

 Score = 130 (45.8 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 25/76 (32%), Positives = 43/76 (56%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G +EF  LW+ +  W+GI++R+  DRSG I   EL  A    G+ +   +  +++ +Y D
Sbjct:    76 GFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSD 135

Query:   322 GSGRRVELGFDSFVEC 369
              +G    + FD+F+ C
Sbjct:   136 ETGN---MDFDNFISC 148


to_Entrezto_Relatedto_pdb >gi|3212511|pdb|1DVI|A  Chain A, Calpain Domain Vi With Calcium Bound
            >gi|3212512|pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium
            Bound
            Length = 184

Frame  1 hits (HSPs):                       ____________________          
                        __________________________________________________
Database sequence:     |             |            |             |         | 184
                       0            50          100           150

  Plus Strand HSPs:

 Score = 130 (45.8 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 25/76 (32%), Positives = 43/76 (56%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G +EF  LW+ +  W+GI++R+  DRSG I   EL  A    G+ +   +  +++ +Y D
Sbjct:    76 GFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSD 135

Query:   322 GSGRRVELGFDSFVEC 369
              +G    + FD+F+ C
Sbjct:   136 ETGN---MDFDNFISC 148


to_Entrezto_Relatedto_Relatedto_ec >gi|1079058|pir||A55054  calpain (EC 3.4.22.17) large chain - fruit fly
            (Drosophila melanogaster) >gi|562288|emb|CAA55297.1| (X78555)
            calpain [Drosophila melanogaster]
            Length = 805

Frame  1 hits (HSPs):                                              ______ 
Annotated Domains:           _________________                   _________
                        __________________________________________________
Database sequence:     |         |        |        |         |        |   | 805
                       0       150      300      450       600      750
__________________

Annotated Domains:
   Entrez               domain: calpain catalytic domain homolog 90..347
   Entrez               domain: calmodulin repeat homology #labe 676..708
   Entrez               domain: calmodulin repeat homology #labe 709..738
   Entrez               domain: calmodulin repeat homology #labe 741..773
   Entrez               domain: calmodulin repeat homology #labe 774..805
   PROSITE              EF_HAND: EF-hand calcium-binding domain. 689..701
   PROSITE              THIOL_PROTEASE_CYS: Eukaryotic thiol (cy 114..125
__________________


  Plus Strand HSPs:

 Score = 143 (50.3 bits), Expect = 6.4e-06, P = 6.4e-06
 Identities = 31/88 (35%), Positives = 48/88 (54%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G +EF  L S +  W+ IF+ Y  + +G++   +LR+AL   GY +   VL +L  +YG 
Sbjct:   697 GFEEFETLLSEIAKWKAIFKVYDVENTGRVSGFQLREALNSAGYHLNNRVLNVLGHRYGS 756

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405
               G+   + FD F+ C + IK   D FK
Sbjct:   757 RDGK---IAFDDFIMCAVKIKTYIDIFK 781


to_Entrezto_Relatedto_Relatedto_ec >gi|1705574|sp|Q11002|CAN_DROME  CALPAIN (CALCIUM-ACTIVATED NEUTRAL PROTEINASE)
            (CANP) >gi|562289|emb|CAA55298.1| (X78555) calpain [Drosophila
            melanogaster]
            Length = 828

Frame  1 hits (HSPs):                                              ______ 
Annotated Domains:      __________________________________________________
                        __________________________________________________
Database sequence:     |        |         |        |        |        |    | 828
                       0      150       300      450      600      750
__________________

Annotated Domains:
   DOMO                 DM01305: CALPAINCATALYTICDOMAIN          44..553
   DOMO                 DM01246: CALPAINCATALYTICDOMAIN          555..610
   DOMO                 DM00011: CALMODULINREPEAT                687..724
   DOMO                 DM01221: CALPAINCATALYTICDOMAIN          726..826
   Entrez               Domain: I, REGULATION OF PROTEASE ACTIVI 1..112
   Entrez               Domain: II, THIOL PROTEASE.              113..394
   Entrez               Domain: III, CONTAINS TWO REPEATS.       395..562
   Entrez               Domain: IV, CALCIUM-BINDING.             563..828
   Entrez               active site: BY SIMILARITY.              143
   Entrez               active site: BY SIMILARITY.              299
   Entrez               active site: BY SIMILARITY.              327
   Entrez               Calcium binding region: SITE 1 (PROBABLE 712..724
   Entrez               Calcium binding region: SITE 2 (PROBABLE 742..753
   Entrez               Domain: ANCESTRAL CALCIUM SITE 3 (POTENT 777..789
   Entrez               Domain: ANCESTRAL CALCIUM SITE 4 (POTENT 807..819
   Entrez               Splicing variant: ENDDH -> RTSRQ (IN SHO 554..558
   Entrez               Splicing variant: MISSING (IN SHORT FORM 559..828
   PFAM                 Peptidase_C2: Calpain family cysteine pr 88..387
   PFAM                 Calpain_III: Calpain large subunit, doma 402..553
   PFAM                 efhand: EF hand                          703..731
   PFAM                 efhand: EF hand                          733..761
   PRINTS               CALPAIN1: Calpain motif I - 2            73..96
   PRINTS               CALPAIN2: Calpain motif II - 2           113..135
   PRINTS               CALPAIN3: Calpain motif III - 2          137..153
   PRINTS               CALPAIN4: Calpain motif IV - 2           173..198
   PRINTS               CALPAIN5: Calpain motif V - 2            203..226
   PRINTS               CALPAIN6: Calpain motif VI - 2           228..255
   PRINTS               CALPAIN7: Calpain motif VII - 2          363..384
   PRINTS               CALPAIN8: Calpain motif VIII - 2         417..434
   PRINTS               CALPAIN9: Calpain motif IX - 2           519..547
   PRODOM               PD112555: CAN_DROME                      1..71
   PRODOM               PD002154: CAN2(4) CAN3(4) CAN(2)         73..171
   PRODOM               PD001545: CAN3(8) CAN2(4) CAN(2)         175..385
   PRODOM               PD001874: CAN2(8) CAN3(5) CAN(2)         388..552
   PRODOM               PD112565: CAN_DROME                      554..580
   PRODOM               PD003609: CAN2(4) CANS(4) SORC(2)        582..610
   PRODOM               PD197268: CAN_DROME                      612..694
   PRODOM               PD003609: CAN2(4) CANS(4) SORC(2)        696..723
   PRODOM               PD002827: CAN2(4) CANS(4) CAN3(3)        727..789
   PRODOM               PD054717: CAN(1) O96454(1)               791..827
   PROSITE              EF_HAND: EF-hand calcium-binding domain. 712..724
   PROSITE              THIOL_PROTEASE_CYS: Eukaryotic thiol (cy 137..148
__________________


  Plus Strand HSPs:

 Score = 143 (50.3 bits), Expect = 6.7e-06, P = 6.7e-06
 Identities = 31/88 (35%), Positives = 48/88 (54%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G +EF  L S +  W+ IF+ Y  + +G++   +LR+AL   GY +   VL +L  +YG 
Sbjct:   720 GFEEFETLLSEIAKWKAIFKVYDVENTGRVSGFQLREALNSAGYHLNNRVLNVLGHRYGS 779

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405
               G+   + FD F+ C + IK   D FK
Sbjct:   780 RDGK---IAFDDFIMCAVKIKTYIDIFK 804


to_Entrezto_Relatedto_Related >gi|600420|emb|CAA86993.1|  (Z46891) Calpain [Drosophila melanogaster]
            Length = 828

Frame  1 hits (HSPs):                                              ______ 
                        __________________________________________________
Database sequence:     |        |         |        |        |        |    | 828
                       0      150       300      450      600      750

  Plus Strand HSPs:

 Score = 143 (50.3 bits), Expect = 6.7e-06, P = 6.7e-06
 Identities = 31/88 (35%), Positives = 48/88 (54%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G +EF  L S +  W+ IF+ Y  + +G++   +LR+AL   GY +   VL +L  +YG 
Sbjct:   720 GFEEFETLLSEIAKWKAIFKVYDVENTGRVSGFQLREALNSAGYHLNNRVLNVLGHRYGS 779

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405
               G+   + FD F+ C + IK   D FK
Sbjct:   780 RDGK---IAFDDFIMCAVKIKTYIDIFK 804


to_Entrezto_Relatedto_Related >gi|7302479|gb|AAF57563.1|  (AE003796) CalpA gene product [Drosophila
            melanogaster]
            Length = 828

Frame  1 hits (HSPs):                                              ______ 
                        __________________________________________________
Database sequence:     |        |         |        |        |        |    | 828
                       0      150       300      450      600      750

  Plus Strand HSPs:

 Score = 143 (50.3 bits), Expect = 6.7e-06, P = 6.7e-06
 Identities = 31/88 (35%), Positives = 48/88 (54%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G +EF  L S +  W+ IF+ Y  + +G++   +LR+AL   GY +   VL +L  +YG 
Sbjct:   720 GFEEFETLLSEIAKWKAIFKVYDVENTGRVSGFQLREALNSAGYHLNNRVLNVLGHRYGS 779

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405
               G+   + FD F+ C + IK   D FK
Sbjct:   780 RDGK---IAFDDFIMCAVKIKTYIDIFK 804


to_Entrezto_Relatedto_Related >gi|2506056|dbj|BAA22638.1|  (AB007824) calpain small subunit [Gallus gallus]
            Length = 214

Frame  1 hits (HSPs):                           _____________________     
                        __________________________________________________
Database sequence:     |           |           |          |           |   | 214
                       0          50         100        150         200

  Plus Strand HSPs:

 Score = 130 (45.8 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 29/88 (32%), Positives = 47/88 (53%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G +EF  LW+ +  W+ +++R+  DRSG I   EL  A    G+ +P  +  +L  +YGD
Sbjct:   106 GFEEFKYLWNNIKKWQLVYKRFDTDRSGTIGVQELPGAFEAAGFRLPPELWGVLGRRYGD 165

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405
               G    L FD+F+ C + +  +   FK
Sbjct:   166 EGGN---LDFDNFISCLVRLDAMFRAFK 190


to_Entrezto_Related >gi|6980466|pdb|1DKV|B  Chain B, The Crystal Structure Of Calcium-Free Human
            M-Calpain
            Length = 184

Frame  1 hits (HSPs):                       ________________________      
                        __________________________________________________
Database sequence:     |             |            |             |         | 184
                       0            50          100           150

  Plus Strand HSPs:

 Score = 124 (43.7 bits), Expect = 2.2e-05, P = 2.2e-05
 Identities = 26/88 (29%), Positives = 47/88 (53%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G +EF  LW+ +  W+ I++++  DRSG I   EL  A    G+ +   +  +++ +Y D
Sbjct:    76 GFEEFKYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYSD 135

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405
              SG    + FD+F+ C + +  +   FK
Sbjct:   136 ESGN---MDFDNFISCLVRLDAMFRAFK 160


to_Entrezto_Relatedto_Related >gi|1794205|gb|AAC53002.1|  (U53859) calpain small subunit [Rattus norvegicus]
            Length = 266

Frame  1 hits (HSPs):                                _______________      
                        __________________________________________________
Database sequence:     |         |        |         |        |        |   | 266
                       0        50      100       150      200      250

  Plus Strand HSPs:

 Score = 130 (45.8 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 25/76 (32%), Positives = 43/76 (56%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G +EF  LW+ +  W+GI++R+  DRSG I   EL  A    G+ +   +  +++ +Y D
Sbjct:   158 GFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSD 217

Query:   322 GSGRRVELGFDSFVEC 369
              +G    + FD+F+ C
Sbjct:   218 ETGN---MDFDNFISC 230


to_Entrezto_Relatedto_Related >gi|2358260|gb|AAB69114.1|  (U89513) calpain large subunit [Mus musculus]
            Length = 688

Frame  1 hits (HSPs):                                             ______  
                        __________________________________________________
Database sequence:     |          |          |          |          |      | 688
                       0        150        300        450        600

  Plus Strand HSPs:

 Score = 136 (47.9 bits), Expect = 3.3e-05, P = 3.3e-05
 Identities = 26/74 (35%), Positives = 42/74 (56%), Frame = +1

Query:   148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327
             +EF   W  L HW  +F ++  D+SG +   ELR AL   G+ + G +LQL++ +Y D  
Sbjct:   582 EEFRVFWDKLKHWMDLFLQFDVDKSGTMSSYELRTALKAAGFQLGGHLLQLIVLRYADED 641

Query:   328 GRRVELGFDSFVEC 369
                ++L FD ++ C
Sbjct:   642 ---LQLDFDDYLNC 652


to_Entrezto_Relatedto_Related >gi|3820523|gb|AAD04331.1|  (AF062404) calpain [Drosophila melanogaster]
            Length = 791

Frame  1 hits (HSPs):                                              ______ 
                        __________________________________________________
Database sequence:     |         |        |         |        |         |  | 791
                       0       150      300       450      600       750

  Plus Strand HSPs:

 Score = 136 (47.9 bits), Expect = 4.0e-05, P = 4.0e-05
 Identities = 29/88 (32%), Positives = 46/88 (52%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G +EF AL + +  WR +F+ Y   R+G ID   LR AL   GY +   +L  L  +YG 
Sbjct:   683 GFEEFEALLTDIAKWRAVFKLYDTRRTGSIDGFHLRGALNSAGYHLNNRLLNALAHRYGS 742

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405
               G   ++ FD F+ C + ++   + F+
Sbjct:   743 REG---QIPFDDFLMCAIKVRTFIEMFR 767


to_Entrezto_Relatedto_Related >gi|7294858|gb|AAF50189.1|  (AE003550) CalpB gene product [Drosophila
            melanogaster]
            Length = 791

Frame  1 hits (HSPs):                                              ______ 
                        __________________________________________________
Database sequence:     |         |        |         |        |         |  | 791
                       0       150      300       450      600       750

  Plus Strand HSPs:

 Score = 136 (47.9 bits), Expect = 4.0e-05, P = 4.0e-05
 Identities = 29/88 (32%), Positives = 46/88 (52%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G +EF AL + +  WR +F+ Y   R+G ID   LR AL   GY +   +L  L  +YG 
Sbjct:   683 GFEEFEALLTDIAKWRAVFKLYDTRRTGSIDGFHLRGALNSAGYHLNNRLLNALAHRYGS 742

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405
               G   ++ FD F+ C + ++   + F+
Sbjct:   743 REG---QIPFDDFLMCAIKVRTFIEMFR 767


to_Entrezto_Relatedto_pdb >gi|3319068|pdb|1ALV|A  Chain A, Calcium Bound Domain Vi Of Porcine Calpain
            >gi|3319069|pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine
            Calpain >gi|3319037|pdb|1ALW|A Chain A, Inhibitor And Calcium Bound
            Domain Vi Of Porcine Calpain >gi|3319038|pdb|1ALW|B Chain B,
            Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
            Length = 173

Frame  1 hits (HSPs):                     _________________________       
                        __________________________________________________
Database sequence:     |              |             |              |      | 173
                       0             50           100            150

  Plus Strand HSPs:

 Score = 120 (42.2 bits), Expect = 4.2e-05, P = 4.2e-05
 Identities = 25/88 (28%), Positives = 46/88 (52%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G +EF  LW+ +  W+ I++++  DRSG I   EL  A    G+ +   +  +++ +Y D
Sbjct:    65 GFEEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSD 124

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405
               G    + FD+F+ C + +  +   FK
Sbjct:   125 EGGN---MDFDNFISCLVRLDAMFRAFK 149


to_Entrezto_Related >gi|6753256  ref|NP_033925.1| calpain 4 [Mus musculus]
            >gi|3511116|gb|AAC97194.1| (AF058298) calpain small subunit [Mus
            musculus]
            Length = 269

Frame  1 hits (HSPs):                                _________________    
                        __________________________________________________
Database sequence:     |         |        |        |        |         |   | 269
                       0        50      100      150      200       250

  Plus Strand HSPs:

 Score = 128 (45.1 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 27/88 (30%), Positives = 47/88 (53%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G +EF  LW+ +  W+ I++R+  DRSG I   EL  A    G+ +   +  +++ +Y D
Sbjct:   161 GFEEFKYLWNNIKKWQAIYKRFDTDRSGTIGSHELPGAFEAAGFHLNEHLYSMIIRRYAD 220

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405
              SG    + FD+F+ C + +  +   FK
Sbjct:   221 ESGN---MDFDNFISCLVRLDAMFRAFK 245


to_Entrezto_Related >gi|11422561  ref|XP_001446.1| GC36 protein [Homo sapiens]
            Length = 571

Frame  1 hits (HSPs):                                           _______   
                        __________________________________________________
Database sequence:     |             |            |            |          | 571
                       0           150          300          450

  Plus Strand HSPs:

 Score = 131 (46.1 bits), Expect = 9.6e-05, P = 9.6e-05
 Identities = 26/73 (35%), Positives = 39/73 (53%), Frame = +1

Query:   151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330
             EF   W  L  W  +F R+  D+SG +   ELR AL   G+ +   +LQL++ +Y D   
Sbjct:   466 EFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYAD--- 522

Query:   331 RRVELGFDSFVEC 369
               ++L FD F+ C
Sbjct:   523 EELQLDFDDFLNC 535


to_Entrezto_Relatedto_Related >gi|4960061|gb|AAD34601.1|  (AF148956) lens-specific calpain Lp82 [Oryctolagus
            cuniculus]
            Length = 709

Frame  1 hits (HSPs):                                             _______ 
                        __________________________________________________
Database sequence:     |          |          |         |          |       | 709
                       0        150        300       450        600

  Plus Strand HSPs:

 Score = 132 (46.5 bits), Expect = 0.00010, P = 0.00010
 Identities = 26/85 (30%), Positives = 48/85 (56%), Frame = +1

Query:   148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327
             +EF  LW  +  W+ IF+RY  D SG I+  E+R+A+   G+ +   +  ++  +Y D  
Sbjct:   603 QEFHHLWKKIKAWQKIFKRYDTDHSGTINSYEMRNAVKDAGFHLNSQLYDIITMRYAD-- 660

Query:   328 GRRVELGFDSFVECGMIIKGLTDKF 402
              + + + FDSF+ C + ++G+   F
Sbjct:   661 -KHMNIDFDSFICCFIRLEGMFRAF 684


to_Entrezto_Related >gi|11422559  ref|XP_001445.1| calpain 9 (nCL-4) [Homo sapiens]
            Length = 597

Frame  1 hits (HSPs):                                            ______   
                        __________________________________________________
Database sequence:     |            |            |           |            | 597
                       0          150          300         450

  Plus Strand HSPs:

 Score = 131 (46.1 bits), Expect = 0.00010, P = 0.00010
 Identities = 26/73 (35%), Positives = 39/73 (53%), Frame = +1

Query:   151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330
             EF   W  L  W  +F R+  D+SG +   ELR AL   G+ +   +LQL++ +Y D   
Sbjct:   492 EFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYAD--- 548

Query:   331 RRVELGFDSFVEC 369
               ++L FD F+ C
Sbjct:   549 EELQLDFDDFLNC 561


to_Entrezto_Related >gi|7705383  ref|NP_057536.1| GC36 protein [Homo sapiens]
            >gi|7023943|dbj|BAA92137.1| (AB038463) down-regulated in gastric
            cancer [Homo sapiens]
            Length = 664

Frame  1 hits (HSPs):                                             ______  
                        __________________________________________________
Database sequence:     |           |          |          |           |    | 664
                       0         150        300        450         600

  Plus Strand HSPs:

 Score = 131 (46.1 bits), Expect = 0.00012, P = 0.00012
 Identities = 26/73 (35%), Positives = 39/73 (53%), Frame = +1

Query:   151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330
             EF   W  L  W  +F R+  D+SG +   ELR AL   G+ +   +LQL++ +Y D   
Sbjct:   559 EFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYAD--- 615

Query:   331 RRVELGFDSFVEC 369
               ++L FD F+ C
Sbjct:   616 EELQLDFDDFLNC 628


to_Entrezto_Related >gi|5729758  ref|NP_006606.1| calpain 9 (nCL-4) [Homo sapiens]
            >gi|2502077|gb|AAB80762.1| (AF022799) digestive tract-specific
            calpain; calcium-dependent cysteine proteinase [Homo sapiens]
            Length = 690

Frame  1 hits (HSPs):                                             ______  
                        __________________________________________________
Database sequence:     |          |          |          |          |      | 690
                       0        150        300        450        600

  Plus Strand HSPs:

 Score = 131 (46.1 bits), Expect = 0.00012, P = 0.00012
 Identities = 26/73 (35%), Positives = 39/73 (53%), Frame = +1

Query:   151 EFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGSG 330
             EF   W  L  W  +F R+  D+SG +   ELR AL   G+ +   +LQL++ +Y D   
Sbjct:   585 EFKVFWDKLKQWINLFLRFDADKSGTMSTYELRTALKAAGFQLSSHLLQLIVLRYAD--- 641

Query:   331 RRVELGFDSFVEC 369
               ++L FD F+ C
Sbjct:   642 EELQLDFDDFLNC 654


to_Entrezto_Related >gi|6912388  ref|NP_036330.1| grancalcin [Homo sapiens]
            >gi|1170014|sp|P28676|GRAN_HUMAN GRANCALCIN >gi|284135|pir||A42578
            EF-hand calcium-binding protein grancalcin - human
            >gi|183031|gb|AAA58498.1| (M81637) grancalcin [Homo sapiens]
            Length = 217

Frame  1 hits (HSPs):                            _______________________  
                        __________________________________________________
Database sequence:     |           |          |           |          |    | 217
                       0          50        100         150        200

  Plus Strand HSPs:

 Score = 122 (42.9 bits), Expect = 0.00013, P = 0.00013
 Identities = 32/102 (31%), Positives = 51/102 (50%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G   F  LW+ L  W+  F    +D SG ++  ELR A+  +GY +    L  ++ +Y  
Sbjct:   110 GFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK 169

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFKGEGYTVYGFSYTFI 447
              +GR   + FD +V C + ++ LTD F+   +   G S  FI
Sbjct:   170 -NGR---IFFDDYVACCVKLRALTDFFRKRDHLQQG-SANFI 206


to_Entrezto_Relatedto_Related >gi|4960059|gb|AAD34600.1|  (AF148955) lens-specific calpain Lp82 [Sus scrofa]
            Length = 709

Frame  1 hits (HSPs):                                             _______ 
                        __________________________________________________
Database sequence:     |          |          |         |          |       | 709
                       0        150        300       450        600

  Plus Strand HSPs:

 Score = 131 (46.1 bits), Expect = 0.00013, P = 0.00013
 Identities = 25/85 (29%), Positives = 48/85 (56%), Frame = +1

Query:   148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327
             +EF  LW  +  W+ IF+ Y  D+SG I+  E+R+A+   G+ +   +  ++  +Y D  
Sbjct:   603 QEFHHLWKKIKSWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYAD-- 660

Query:   328 GRRVELGFDSFVECGMIIKGLTDKF 402
              + + + FDSF+ C + ++G+   F
Sbjct:   661 -KYMNIDFDSFIRCFVRLEGMFRAF 684


to_Entrezto_Related >gi|4502565  ref|NP_001740.1| calpain 4 small subunit; calpain, small
            polypeptide; calcium-dependent protease, small subunit;
            calcium-activated neutral proteinase [Homo sapiens] >gi|11426701
            ref|XP_009338.1| calpain 4 small subunit [Homo sapiens]
            >gi|115612|sp|P04632|CANS_HUMAN CALCIUM-DEPENDENT PROTEASE, SMALL
            SUBUNIT (CALPAIN REGULATORY SUBUNIT) (CALCIUM-ACTIVATED NEUTRAL
            PROTEINASE) (CANP) >gi|67665|pir||CIHUL calpain (EC 3.4.22.17)
            small chain - human >gi|35328|emb|CAA27726.1| (X04106) protease
            small subunit (aa 1-268) [Homo sapiens] >gi|179909|gb|AAA35646.1|
            (M31511) neutral protease alpha subunit [Homo sapiens]
            >gi|1905903|gb|AAB51183.1| (AD001527) calcium-dependent protease,
            small (regulatory) subunit (calpain) (calcium-activated neutral
            proteinase) (CANP) [Homo sapiens] >gi|2443873|gb|AAB81546.1|
            (AC002984) CANS_Human [Homo sapiens]
            >gi|12653629|gb|AAH00592.1|AAH00592 (BC000592) calpain 4, small
            subunit (30K) [Homo sapiens]
            Length = 268

Frame  1 hits (HSPs):                                _________________    
                        __________________________________________________
Database sequence:     |         |        |        |         |        |   | 268
                       0        50      100      150       200      250

  Plus Strand HSPs:

 Score = 124 (43.7 bits), Expect = 0.00015, P = 0.00015
 Identities = 26/88 (29%), Positives = 47/88 (53%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G +EF  LW+ +  W+ I++++  DRSG I   EL  A    G+ +   +  +++ +Y D
Sbjct:   160 GFEEFKYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYSD 219

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFK 405
              SG    + FD+F+ C + +  +   FK
Sbjct:   220 ESGN---MDFDNFISCLVRLDAMFRAFK 244


to_Entrezto_Related >gi|11428473  ref|XP_002208.1| grancalcin [Homo sapiens]
            Length = 256

Frame  1 hits (HSPs):                               ____________________  
                        __________________________________________________
Database sequence:     |         |         |         |        |         | | 256
                       0        50       100       150      200       250

  Plus Strand HSPs:

 Score = 122 (42.9 bits), Expect = 0.00023, P = 0.00023
 Identities = 32/102 (31%), Positives = 51/102 (50%), Frame = +1

Query:   142 GPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGD 321
             G   F  LW+ L  W+  F    +D SG ++  ELR A+  +GY +    L  ++ +Y  
Sbjct:   149 GFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK 208

Query:   322 GSGRRVELGFDSFVECGMIIKGLTDKFKGEGYTVYGFSYTFI 447
              +GR   + FD +V C + ++ LTD F+   +   G S  FI
Sbjct:   209 -NGR---IFFDDYVACCVKLRALTDFFRKRDHLQQG-SANFI 245


to_Entrezto_Relatedto_Related >gi|7684607|gb|AAD28254.3|AF127765_1  (AF127765) calpain 3; calcium activated
            neutral protease; CAPN3; CL1 [Homo sapiens]
            Length = 729

Frame  1 hits (HSPs):                                             _______ 
                        __________________________________________________
Database sequence:     |          |         |         |          |        | 729
                       0        150       300       450        600

  Plus Strand HSPs:

 Score = 129 (45.4 bits), Expect = 0.00023, P = 0.00023
 Identities = 25/85 (29%), Positives = 49/85 (57%), Frame = +1

Query:   148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327
             +EF  LW+ +  W+ IF+ Y  D+SG I+  E+R+A+   G+ +   +  ++  +Y D  
Sbjct:   623 QEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYAD-- 680

Query:   328 GRRVELGFDSFVECGMIIKGLTDKF 402
              + + + FDSF+ C + ++G+   F
Sbjct:   681 -KHMNIDFDSFICCFVRLEGMFRAF 704


to_Entrezto_Relatedto_Relatedto_ec >gi|87013|pir||A34488  calpain (EC 3.4.22.17) heavy chain - human (fragment)
            Length = 778

Frame  1 hits (HSPs):                                              ______ 
Annotated Domains:         ____________________               ____________
                        __________________________________________________
Database sequence:     |         |         |        |         |         | | 778
                       0       150       300      450       600       750
__________________

Annotated Domains:
   Entrez               domain: calpain catalytic domain homolog 56..357
   Entrez               domain: calmodulin repeat homology #labe 606..637
   Entrez               domain: calmodulin repeat homology #labe 649..681
   Entrez               domain: calmodulin repeat homology #labe 682..711
   Entrez               domain: calmodulin repeat homology #labe 714..746
   Entrez               domain: calmodulin repeat homology #labe 747..778
   Entrez               active site: Cys, His, Asn               86
   Entrez               active site: Cys, His, Asn               291
   Entrez               active site: Cys, His, Asn               315
   PROSITE              EF_HAND: EF-hand calcium-binding domain. 662..674
   PROSITE              EF_HAND: EF-hand calcium-binding domain. 692..704
   PROSITE              THIOL_PROTEASE_CYS: Eukaryotic thiol (cy 80..91
__________________


  Plus Strand HSPs:

 Score = 129 (45.4 bits), Expect = 0.00025, P = 0.00025
 Identities = 25/85 (29%), Positives = 49/85 (57%), Frame = +1

Query:   148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327
             +EF  LW+ +  W+ IF+ Y  D+SG I+  E+R+A+   G+ +   +  ++  +Y D  
Sbjct:   672 QEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYAD-- 729

Query:   328 GRRVELGFDSFVECGMIIKGLTDKF 402
              + + + FDSF+ C + ++G+   F
Sbjct:   730 -KHMNIDFDSFICCFVRLEGMFRAF 753


to_Entrezto_Relatedto_Related >gi|4704752|gb|AAD28253.1|AF127764_1  (AF127764) calpain 3; calcium activated
            neutral protease; CAPN3; CL1 [Homo sapiens]
            Length = 815

Frame  1 hits (HSPs):                                              ______ 
                        __________________________________________________
Database sequence:     |         |        |        |        |        |    | 815
                       0       150      300      450      600      750

  Plus Strand HSPs:

 Score = 129 (45.4 bits), Expect = 0.00026, P = 0.00026
 Identities = 25/85 (29%), Positives = 49/85 (57%), Frame = +1

Query:   148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327
             +EF  LW+ +  W+ IF+ Y  D+SG I+  E+R+A+   G+ +   +  ++  +Y D  
Sbjct:   709 QEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYAD-- 766

Query:   328 GRRVELGFDSFVECGMIIKGLTDKF 402
              + + + FDSF+ C + ++G+   F
Sbjct:   767 -KHMNIDFDSFICCFVRLEGMFRAF 790


to_Entrezto_Relatedto_Related >gi|11037484|gb|AAG27599.1|AF277376_1  (AF277376) calpain 3 [Macaca
            fascicularis]
            Length = 815

Frame  1 hits (HSPs):                                              ______ 
                        __________________________________________________
Database sequence:     |         |        |        |        |        |    | 815
                       0       150      300      450      600      750

  Plus Strand HSPs:

 Score = 129 (45.4 bits), Expect = 0.00026, P = 0.00026
 Identities = 25/85 (29%), Positives = 49/85 (57%), Frame = +1

Query:   148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327
             +EF  LW+ +  W+ IF+ Y  D+SG I+  E+R+A+   G+ +   +  ++  +Y D  
Sbjct:   709 QEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYAD-- 766

Query:   328 GRRVELGFDSFVECGMIIKGLTDKF 402
              + + + FDSF+ C + ++G+   F
Sbjct:   767 -KHMNIDFDSFICCFVRLEGMFRAF 790


to_Entrezto_Related >gi|4557405  ref|NP_000061.1| calpain, large polypeptide L3; p94 [Homo sapiens]
            >gi|1345664|sp|P20807|CAN3_HUMAN CALPAIN 3 LARGE SUBUNIT (CALPAIN
            L3) (CALPAIN P94, LARGE [CATALYTIC] SUBUNIT) (CALCIUM-ACTIVATED
            NEUTRAL PROTEINASE 3) (CANP 3) (MUSCLE-SPECIFIC CALCIUM-ACTIVATED
            NEUTRAL PROTEASE 3 LARGE SUBUNIT) >gi|1082271|pir||A56218 calpain
            (EC 3.4.22.17) 3 large chain - human >gi|7428243|pir||CIHUH3
            calpain (EC 3.4.22.17) large chain 3 - human
            >gi|791040|emb|CAA59403.1| (X85030) calpain [Homo sapiens]
            Length = 821

Frame  1 hits (HSPs):                                              ______ 
                        __________________________________________________
Database sequence:     |         |        |        |        |        |    | 821
                       0       150      300      450      600      750

  Plus Strand HSPs:

 Score = 129 (45.4 bits), Expect = 0.00027, P = 0.00027
 Identities = 25/85 (29%), Positives = 49/85 (57%), Frame = +1

Query:   148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327
             +EF  LW+ +  W+ IF+ Y  D+SG I+  E+R+A+   G+ +   +  ++  +Y D  
Sbjct:   715 QEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYAD-- 772

Query:   328 GRRVELGFDSFVECGMIIKGLTDKF 402
              + + + FDSF+ C + ++G+   F
Sbjct:   773 -KHMNIDFDSFICCFVRLEGMFRAF 796


to_Entrezto_Related >gi|12738707  ref|XP_007541.2| calpain, large polypeptide L3 [Homo sapiens]
            Length = 845

Frame  1 hits (HSPs):                                              ______ 
                        __________________________________________________
Database sequence:     |        |        |        |        |        |     | 845
                       0      150      300      450      600      750

  Plus Strand HSPs:

 Score = 129 (45.4 bits), Expect = 0.00028, P = 0.00028
 Identities = 25/85 (29%), Positives = 49/85 (57%), Frame = +1

Query:   148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327
             +EF  LW+ +  W+ IF+ Y  D+SG I+  E+R+A+   G+ +   +  ++  +Y D  
Sbjct:   739 QEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYAD-- 796

Query:   328 GRRVELGFDSFVECGMIIKGLTDKF 402
              + + + FDSF+ C + ++G+   F
Sbjct:   797 -KHMNIDFDSFICCFVRLEGMFRAF 820


to_Entrezto_Relatedto_Related >gi|1628587|gb|AAB17381.1|  (U71320) calpain II [Sus scrofa]
            Length = 203

Frame  1 hits (HSPs):                    _________________________        
                        __________________________________________________
Database sequence:     |            |           |           |            || 203
                       0           50         100         150          200

  Plus Strand HSPs:

 Score = 118 (41.5 bits), Expect = 0.00030, P = 0.00030
 Identities = 28/95 (29%), Positives = 53/95 (55%), Frame = +1

Query:    88 GWSVPLC*FQLPV----ACAFTGPKEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDA 255
             G+S+  C   + +      A  G KEF  LW+ +  ++ I+     DRSG ++  E+R A
Sbjct:    74 GFSIETCKIMVDMLDSDGSAKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKA 133

Query:   256 LYGIGYAVPGSVLQLLLSKYGDGSGRRVELGFDSFVEC 369
             L   G+ +P  + Q++++++ D    ++ + FD+FV C
Sbjct:   134 LEEAGFKLPCQLHQVIVARFADD---QLIIDFDNFVRC 168


to_Entrezto_Relatedto_Related >gi|2584822|gb|AAC04848.1|  (U96367) calpain Lp82 [Rattus norvegicus]
            Length = 709

Frame  1 hits (HSPs):                                             _______ 
                        __________________________________________________
Database sequence:     |          |          |         |          |       | 709
                       0        150        300       450        600

  Plus Strand HSPs:

 Score = 127 (44.7 bits), Expect = 0.00037, P = 0.00037
 Identities = 25/85 (29%), Positives = 47/85 (55%), Frame = +1

Query:   148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327
             +EF  LW  +  W+ IF+ Y  D SG I+  E+R+A+   G+ +   +  ++  +Y D  
Sbjct:   603 QEFHHLWKKIKAWQKIFKHYDTDHSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYAD-- 660

Query:   328 GRRVELGFDSFVECGMIIKGLTDKF 402
              + + + FDSF+ C + ++G+   F
Sbjct:   661 -KHMNIDFDSFICCFVRLEGMFRAF 684


to_Entrezto_Relatedto_Related >gi|3661585|gb|AAC61764.1|  (AF091998) calpain Lp82 [Mus musculus]
            Length = 709

Frame  1 hits (HSPs):                                             _______ 
                        __________________________________________________
Database sequence:     |          |          |         |          |       | 709
                       0        150        300       450        600

  Plus Strand HSPs:

 Score = 127 (44.7 bits), Expect = 0.00037, P = 0.00037
 Identities = 25/85 (29%), Positives = 47/85 (55%), Frame = +1

Query:   148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327
             +EF  LW  +  W+ IF+ Y  D SG I+  E+R+A+   G+ +   +  ++  +Y D  
Sbjct:   603 QEFHHLWKKIKAWQKIFKHYDTDHSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYAD-- 660

Query:   328 GRRVELGFDSFVECGMIIKGLTDKF 402
              + + + FDSF+ C + ++G+   F
Sbjct:   661 -KHMNIDFDSFICCFVRLEGMFRAF 684


to_Entrezto_Relatedto_Related >gi|7674485|gb|AAD28255.2|AF127766_1  (AF127766) calpain 3; calcium activated
            neutral protease [Mus musculus]
            Length = 729

Frame  1 hits (HSPs):                                             _______ 
                        __________________________________________________
Database sequence:     |          |         |         |          |        | 729
                       0        150       300       450        600

  Plus Strand HSPs:

 Score = 127 (44.7 bits), Expect = 0.00038, P = 0.00038
 Identities = 25/85 (29%), Positives = 47/85 (55%), Frame = +1

Query:   148 KEFAALWSCLGHWRGIFERYXKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYGDGS 327
             +EF  LW  +  W+ IF+ Y  D SG I+  E+R+A+   G+ +   +  ++  +Y D  
Sbjct:   623 QEFHHLWKKIKAWQKIFKHYDTDHSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYAD-- 680

Query:   328 GRRVELGFDSFVECGMIIKGLTDKF 402
              + + + FDSF+ C + ++G+   F
Sbjct:   681 -KHMNIDFDSFICCFVRLEGMFRAF 704


WARNING:  HSPs involving 80 database sequences were not reported due to the
          limiting value of parameter B = 50.


Parameters:
  filter=none
  matrix=BLOSUM62
  V=50
  B=50
  E=10
  gi
  H=1
  sort_by_pvalue
  echofilter

  ctxfactor=5.96

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   Std.    0   BLOSUM62                                 0.318   0.135   0.401  
   +3      0   BLOSUM62        0.318   0.135   0.401    0.361   0.161   0.657  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   +2      0   BLOSUM62        0.318   0.135   0.401    0.346   0.154   0.498  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   +1      0   BLOSUM62        0.318   0.135   0.401    0.347   0.159   0.558  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -1      0   BLOSUM62        0.318   0.135   0.401    0.345   0.149   0.496  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -2      0   BLOSUM62        0.318   0.135   0.401    0.355   0.158   0.564  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -3      0   BLOSUM62        0.318   0.135   0.401    0.360   0.161   0.562  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E    S W   T  X   E2     S2
   +3      0      272       258       10.  78 3  12 22  0.091   36
                                                    32  0.11    39
   +2      0      272       260       10.  78 3  12 22  0.092   36
                                                    32  0.11    39
   +1      0      273       261       10.  78 3  12 22  0.092   36
                                                    32  0.11    39
   -1      0      273       260       10.  78 3  12 22  0.092   36
                                                    32  0.11    39
   -2      0      272       257       10.  78 3  12 22  0.12    35
                                                    32  0.11    39
   -3      0      272       259       10.  78 3  12 22  0.091   36
                                                    32  0.11    39


Statistics:

  Database:  /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
    Title:  nr
    Release date:  unknown
    Posted date:  4:06 PM CST Feb 28, 2001
    Format:  BLAST
  # of letters in database:  197,782,623
  # of sequences in database:  625,274
  # of database sequences satisfying E:  130
  No. of states in DFA:  599 (59 KB)
  Total size of DFA:  262 KB (320 KB)
  Time to generate neighborhood:  0.01u 0.00s 0.01t  Elapsed: 00:00:00
  No. of threads or processors used:  6
  Search cpu time:  243.94u 0.88s 244.82t  Elapsed: 00:01:20
  Total cpu time:  244.00u 0.91s 244.91t  Elapsed: 00:01:20
  Start:  Mon Oct  1 17:02:13 2001   End:  Mon Oct  1 17:03:33 2001

WARNINGS ISSUED:  2

Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000