BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= PI0818
(465 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156859176|gb|EDO52607.1| hypothetical protein BACUNI_034... 630 e-179
gi|154491048|ref|ZP_02030989.1| hypothetical protein PARMER... 620 e-176
gi|29349713|ref|NP_813216.1| putative alpha-amylase [Bacter... 615 e-174
gi|150005304|ref|YP_001300048.1| glycoside hydrolase family... 613 e-174
gi|53712292|ref|YP_098284.1| putative alpha-amylase [Bacter... 607 e-172
gi|156107500|gb|EDO09245.1| hypothetical protein BACOVA_051... 604 e-171
gi|153807611|ref|ZP_01960279.1| hypothetical protein BACCAC... 599 e-169
gi|150006876|ref|YP_001301619.1| glycoside hydrolase family... 479 e-133
gi|34541321|ref|NP_905800.1| hypothetical protein PG1683 [P... 420 e-115
gi|126648679|ref|ZP_01721163.1| hypothetical protein ALPR1_... 369 e-100
gi|67941056|ref|ZP_00533320.1| Alpha-amylase [Chlorobium ph... 348 4e-94
gi|94986775|ref|YP_594708.1| alpha-amylase [Lawsonia intrac... 312 3e-83
gi|110637221|ref|YP_677428.1| a-amylase, glycoside hydrolas... 250 2e-64
gi|71394079|gb|AAZ32118.1| alpha-amylase/alpha-mannosidase ... 248 6e-64
gi|20092845|ref|NP_618920.1| alpha-amylase [Methanosarcina ... 246 2e-63
gi|21226964|ref|NP_632886.1| Alpha-amylase [Methanosarcina ... 239 4e-61
gi|73668084|ref|YP_304099.1| alpha-amylase [Methanosarcina ... 229 3e-58
gi|85858687|ref|YP_460889.1| alpha-amylase [Syntrophus acid... 228 5e-58
gi|119719053|ref|YP_919548.1| Alpha-amylase [Thermofilum pe... 224 1e-56
gi|91772483|ref|YP_565175.1| Alpha-amylase [Methanococcoide... 216 3e-54
gi|116753574|ref|YP_842692.1| Alpha-amylase [Methanosaeta t... 212 5e-53
gi|150402461|ref|YP_001329755.1| Alpha-amylase [Methanococc... 208 5e-52
gi|15669807|ref|NP_248621.1| alpha-amylase (amyA) [Methanoc... 208 6e-52
gi|150400450|ref|YP_001324216.1| Alpha-amylase [Methanococc... 208 6e-52
gi|48478312|ref|YP_024018.1| alpha-amylase [Picrophilus tor... 207 1e-51
gi|13541262|ref|NP_110950.1| Alpha-amylase [Thermoplasma vo... 206 2e-51
gi|154151079|ref|YP_001404697.1| Alpha-amylase [Candidatus ... 205 5e-51
gi|150399352|ref|YP_001323119.1| Alpha-amylase [Methanococc... 205 5e-51
gi|134045347|ref|YP_001096833.1| Alpha-amylase [Methanococc... 203 2e-50
gi|45358854|ref|NP_988411.1| Glycoside hydrolase, family 57... 200 2e-49
gi|126008144|ref|ZP_01708719.1| hypothetical protein Faci_0... 197 1e-48
gi|88602129|ref|YP_502307.1| Alpha-amylase [Methanospirillu... 196 2e-48
gi|147920292|ref|YP_685938.1| putative alpha-amylase [uncul... 196 3e-48
gi|126466279|ref|YP_001041388.1| glycoside hydrolase, famil... 194 8e-48
gi|126459652|ref|YP_001055930.1| Alpha-amylase [Pyrobaculum... 191 8e-47
gi|41033621|emb|CAF18477.1| alpha-amylase [Thermoproteus te... 187 1e-45
gi|126353038|ref|ZP_01710049.1| Alpha-amylase [Caldivirga m... 183 2e-44
gi|16082514|ref|NP_393818.1| Alpha-amylase [Thermoplasma ac... 182 4e-44
gi|15921052|ref|NP_376721.1| hypothetical protein ST0817 [S... 176 3e-42
gi|15897865|ref|NP_342470.1| Alpha amylase [Sulfolobus solf... 176 4e-42
gi|18314057|ref|NP_560724.1| hypothetical protein PAE3428 [... 175 5e-42
gi|70606970|ref|YP_255840.1| alpha-amylase [Sulfolobus acid... 174 9e-42
gi|119872481|ref|YP_930488.1| Alpha-amylase [Pyrobaculum is... 174 1e-41
gi|10639511|emb|CAC11483.1| alpha-amylase related protein [... 167 1e-39
gi|145592080|ref|YP_001154082.1| Alpha-amylase [Pyrobaculum... 166 3e-39
gi|146304184|ref|YP_001191500.1| Alpha-amylase [Metallospha... 161 7e-38
gi|21226963|ref|NP_632885.1| Alpha-amylase [Methanosarcina ... 134 1e-29
gi|73668083|ref|YP_304098.1| alpha-amylase [Methanosarcina ... 134 2e-29
gi|20092846|ref|NP_618921.1| alpha-amylase [Methanosarcina ... 126 3e-27
gi|85859160|ref|YP_461362.1| alpha-amylase [Syntrophus acid... 124 1e-26
gi|91772482|ref|YP_565174.1| glycoside hydrolase, family 57... 119 3e-25
gi|126179214|ref|YP_001047179.1| Alpha-amylase [Methanocull... 77 3e-12
>gi|156859176|gb|EDO52607.1| hypothetical protein BACUNI_03400 [Bacteroides uniformis ATCC 8492]
Length = 471
Score = 630 bits (1625), Expect = e-179, Method: Composition-based stats.
Identities = 304/464 (65%), Positives = 363/464 (78%), Gaps = 16/464 (3%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
M+TICLYFEIHQIIHL+RYRFFDIGTDHYYYDDY NE SI D+ +RSY+PAL+TL++M+K
Sbjct: 1 MRTICLYFEIHQIIHLKRYRFFDIGTDHYYYDDYANETSINDVAERSYIPALNTLIEMVK 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
+S G FKVA +SGV +E LE YAP VI+ + +L TGC EFLAEPYSHGL++L NED F
Sbjct: 61 NSGGAFKVAFSISGVALEQLEIYAPAVIDLLHQLNDTGCCEFLAEPYSHGLSSLANEDCF 120
Query: 121 KAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPH 180
K EV R S K+K+ F PKV RNSSLIY+DEIG M A + FKGM+TEGAKHVLGWKSPH
Sbjct: 121 KEEVMRQSAKMKQMFGKAPKVFRNSSLIYNDEIGAMVAALGFKGMLTEGAKHVLGWKSPH 180
Query: 181 YLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIF 240
Y+YHC++ P LKL+LRD LSDDISLRF+NSEW YPLFAD YIN I + P EEQ+ +F
Sbjct: 181 YVYHCSMNPNLKLLLRDFKLSDDISLRFSNSEWNEYPLFADKYINWIDALPQEEQVINVF 240
Query: 241 MNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYPLSWRD 300
M L+ALG+ QPL SNILEF KALP CA+ +GI+FSTPTE+ + KSV +L VPYP+SW D
Sbjct: 241 MELSALGMAQPLSSNILEFLKALPYCAKEKGITFSTPTEIVTKLKSVSQLDVPYPMSWVD 300
Query: 301 EERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPVPVG 360
EERD S WLGN MQREAFNKLYS+A+RV + +D RI QDWDYLQAS+NF M+TK VG
Sbjct: 301 EERDTSCWLGNVMQREAFNKLYSVAERVHLCDDRRIKQDWDYLQASNNFRFMTTKQSGVG 360
Query: 361 VDRGIYSTPFDAFTNYMNILGDFISRVDALYPADIDNEELNALLTAIRNQASEIETKEKE 420
++RGIY +PFDAFTNYMNILGDFI RVD+LYP DIDNEELNALLT I+NQ +EI
Sbjct: 361 LNRGIYESPFDAFTNYMNILGDFIKRVDSLYPVDIDNEELNALLTTIQNQGAEI------ 414
Query: 421 KVLLKAKAEKLANENDKLRAKLEQYEKSDKPKKTKAATTKKAAK 464
E+L E +K +AKLE+ + ++ KK AT K AA+
Sbjct: 415 --------EELHKELEKAQAKLEKIKAAE--KKESKATAKSAAE 448
>gi|154491048|ref|ZP_02030989.1| hypothetical protein PARMER_00967 [Parabacteroides merdae ATCC
43184]
gi|154088796|gb|EDN87840.1| hypothetical protein PARMER_00967 [Parabacteroides merdae ATCC
43184]
Length = 435
Score = 620 bits (1598), Expect = e-176, Method: Composition-based stats.
Identities = 287/420 (68%), Positives = 343/420 (81%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
MKTICLYFEIHQIIHL+RYR FDIGTDHYYYDDYENERSIT+I +RSY+PAL TLL+M+K
Sbjct: 1 MKTICLYFEIHQIIHLKRYRCFDIGTDHYYYDDYENERSITEIAERSYIPALTTLLEMVK 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
++ G FKVA +SGV +E LE Y+P VI+ + +L TGC EFL EPYSHGL++L NE+ F
Sbjct: 61 NNGGAFKVAFSISGVALEQLEIYSPAVIDLLHQLNDTGCCEFLCEPYSHGLSSLANEECF 120
Query: 121 KAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPH 180
+ EV R+S KIK+ F TPKV RNSSLIYS+EIG + A M FKG++TEGAKHVLGWKSPH
Sbjct: 121 REEVSRMSAKIKQVFGQTPKVFRNSSLIYSNEIGSVVASMGFKGILTEGAKHVLGWKSPH 180
Query: 181 YLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIF 240
Y+YHCA P LK++LRD LSDDISLRF+NS+W YPLFAD YI IA P+EEQ+ IF
Sbjct: 181 YVYHCAYNPNLKILLRDFKLSDDISLRFSNSDWSEYPLFADKYIGWIAGLPEEEQVINIF 240
Query: 241 MNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYPLSWRD 300
M L+ALGI QPL SNIL+F KALP CA+ +GISFSTP+E+ + KSV ++ VPYP+SW D
Sbjct: 241 MELSALGIAQPLSSNILQFMKALPACAKEKGISFSTPSEIVTKFKSVDQVDVPYPMSWAD 300
Query: 301 EERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPVPVG 360
EERD S WLGN MQREAFNKLYS+A RV + +D RI QDWDYLQAS+NF M+TK +
Sbjct: 301 EERDTSCWLGNVMQREAFNKLYSVAGRVHLCDDRRIKQDWDYLQASNNFRFMTTKKTGIW 360
Query: 361 VDRGIYSTPFDAFTNYMNILGDFISRVDALYPADIDNEELNALLTAIRNQASEIETKEKE 420
++RGIY +P+DAFTNYMNILGDFISRVDALYP +I+NEELN+LLT I+NQ EIE +KE
Sbjct: 361 LNRGIYDSPYDAFTNYMNILGDFISRVDALYPVEIENEELNSLLTTIKNQGEEIEKLQKE 420
>gi|29349713|ref|NP_813216.1| putative alpha-amylase [Bacteroides thetaiotaomicron VPI-5482]
gi|29341623|gb|AAO79410.1| putative alpha-amylase [Bacteroides thetaiotaomicron VPI-5482]
Length = 460
Score = 615 bits (1585), Expect = e-174, Method: Composition-based stats.
Identities = 287/430 (66%), Positives = 344/430 (80%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
M+TICLYFEIHQIIHL+RYRFFDIGTDHYYYDDY NE + ++ +RSY+PAL TL++M+K
Sbjct: 1 MRTICLYFEIHQIIHLKRYRFFDIGTDHYYYDDYANETGMNEVAERSYIPALSTLIEMVK 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
+S G FKVAL +SGV +E LE +AP VI+ + +L TGC EFL EPYSHGL++L NED F
Sbjct: 61 NSGGAFKVALSISGVALEQLEIHAPAVIDLLHQLNDTGCCEFLCEPYSHGLSSLANEDCF 120
Query: 121 KAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPH 180
+ EV R K+K+ F PKV RNSSLIYSDEIG + A M FKGM+TEGAKHVLGWKSPH
Sbjct: 121 REEVLRQRDKMKQMFGKEPKVFRNSSLIYSDEIGGLVASMGFKGMLTEGAKHVLGWKSPH 180
Query: 181 YLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIF 240
Y+YHC AP LKL+LRD LSDDI LRF+NSEW YPLFAD YIN I + P EEQ+ IF
Sbjct: 181 YVYHCNQAPSLKLLLRDFKLSDDIGLRFSNSEWPEYPLFADKYINWIDALPQEEQVINIF 240
Query: 241 MNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYPLSWRD 300
M L+ALG+ QPL SNILEF KALPECA+ +GI+FSTPTE+ + KSV +L VPYP+SW D
Sbjct: 241 MELSALGMAQPLSSNILEFLKALPECAKSKGITFSTPTEIVSKLKSVSQLDVPYPMSWVD 300
Query: 301 EERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPVPVG 360
EERD S+WLGN +QREAFNKLYS+A+RV + +D RI QDWDYLQAS+NF M+TK +
Sbjct: 301 EERDTSSWLGNILQREAFNKLYSVAERVHLCDDRRIKQDWDYLQASNNFRFMTTKNTGIW 360
Query: 361 VDRGIYSTPFDAFTNYMNILGDFISRVDALYPADIDNEELNALLTAIRNQASEIETKEKE 420
++RGIY +P+DAFTNYMNILGDFI RVD+LYP D+DNEELN+LLT I+NQ EI +KE
Sbjct: 361 LNRGIYDSPYDAFTNYMNILGDFIKRVDSLYPVDVDNEELNSLLTTIKNQGEEIAELQKE 420
Query: 421 KVLLKAKAEK 430
+AKAEK
Sbjct: 421 VTKWQAKAEK 430
>gi|150005304|ref|YP_001300048.1| glycoside hydrolase family 57, candidate alpha-glycosidase
[Bacteroides vulgatus ATCC 8482]
gi|149933728|gb|ABR40426.1| glycoside hydrolase family 57, candidate alpha-glycosidase
[Bacteroides vulgatus ATCC 8482]
Length = 470
Score = 613 bits (1580), Expect = e-174, Method: Composition-based stats.
Identities = 287/430 (66%), Positives = 347/430 (80%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
MKTICLYFEIHQIIHL+RYR FDIG DHYYYDDYENER I+DI +RSY+PAL L++M K
Sbjct: 1 MKTICLYFEIHQIIHLKRYRCFDIGRDHYYYDDYENERGISDIAERSYIPALSALIEMAK 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
+ FKVAL +SGV +E LE +AP VIE + +L +TGC EFL EPYSHGL++L NED F
Sbjct: 61 NHGDTFKVALSISGVALEQLEVHAPGVIELLHQLNETGCCEFLCEPYSHGLSSLANEDCF 120
Query: 121 KAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPH 180
+ EV+R+ KIK+ F PKV RNSSLIYS++IG A+M FKGM+TEGAKH+LGWKSPH
Sbjct: 121 REEVERMRTKIKQIFGKEPKVFRNSSLIYSNDIGATIADMGFKGMLTEGAKHILGWKSPH 180
Query: 181 YLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIF 240
YLYHCA+ P LKL+LRD LSDDISLRF+NSEW YPLFAD YI+ IA+ P+EEQ+ IF
Sbjct: 181 YLYHCAMNPNLKLLLRDFKLSDDISLRFSNSEWNEYPLFADKYIDWIAALPEEEQVINIF 240
Query: 241 MNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYPLSWRD 300
M L+ALGI QPL SNILEF KALP CA+ RG++FSTPT++ + KSV ++ VPYP+SW D
Sbjct: 241 MELSALGIAQPLSSNILEFMKALPVCAKERGVTFSTPTDIITKLKSVDQVDVPYPMSWID 300
Query: 301 EERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPVPVG 360
EERD+S WLGN MQREAFNKLYS+A+RV + +D RI QDWDYLQAS+NF M+TK +
Sbjct: 301 EERDISPWLGNVMQREAFNKLYSVAERVHLCDDRRIKQDWDYLQASNNFRFMTTKNTGIW 360
Query: 361 VDRGIYSTPFDAFTNYMNILGDFISRVDALYPADIDNEELNALLTAIRNQASEIETKEKE 420
++RGIY +P+DAFTNYMNILGDFISRV++LYP D+DNEELN+LLT I+NQ E+ KE
Sbjct: 361 LNRGIYDSPYDAFTNYMNILGDFISRVNSLYPVDMDNEELNSLLTTIKNQGEELVALNKE 420
Query: 421 KVLLKAKAEK 430
L+AK EK
Sbjct: 421 VERLQAKLEK 430
>gi|53712292|ref|YP_098284.1| putative alpha-amylase [Bacteroides fragilis YCH46]
gi|60680470|ref|YP_210614.1| putative glycosyl hydrolase [Bacteroides fragilis NCTC 9343]
gi|52215157|dbj|BAD47750.1| putative alpha-amylase [Bacteroides fragilis YCH46]
gi|60491904|emb|CAH06663.1| putative glycosyl hydrolase [Bacteroides fragilis NCTC 9343]
Length = 462
Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats.
Identities = 287/432 (66%), Positives = 344/432 (79%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
M+TICLYFEIHQIIHL+RYRFFDIG DHYYYDDY NE I ++ +RSY+PAL+TL++M+K
Sbjct: 1 MRTICLYFEIHQIIHLKRYRFFDIGADHYYYDDYANETGINEVAERSYIPALNTLIEMVK 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
+S G FKVAL +SGV +E LE +AP VI+ + L TGC EFLAEPYSHGL++L NED F
Sbjct: 61 NSGGAFKVALSISGVALEQLEIHAPAVIDLLHILNDTGCCEFLAEPYSHGLSSLANEDCF 120
Query: 121 KAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPH 180
+ EV R S+K+K+ F PKV RNSSLIYSDEIG A M FKGM+TEGAKHVLGWKSPH
Sbjct: 121 REEVMRQSEKMKQMFGKAPKVFRNSSLIYSDEIGATVASMGFKGMLTEGAKHVLGWKSPH 180
Query: 181 YLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIF 240
Y+YHC AP LKL+LRD LSDDISLRF+NS+W YPLFAD +I I + P EEQ+ IF
Sbjct: 181 YVYHCNQAPSLKLLLRDFKLSDDISLRFSNSDWSEYPLFADKFIGWIDALPQEEQVINIF 240
Query: 241 MNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYPLSWRD 300
M L ALG+ QPL SNILEF KALP CA+ +GI+FSTP+E+ + KSV +L VPYP+SW D
Sbjct: 241 MELKALGMAQPLSSNILEFLKALPYCAKEKGITFSTPSEIISKLKSVSQLDVPYPMSWVD 300
Query: 301 EERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPVPVG 360
EERD S+WLGN +QREAF+KLYS+A+RV + +D RI QDWDYLQAS+NF M+TK V
Sbjct: 301 EERDTSSWLGNVLQREAFSKLYSVAERVHLCDDRRIKQDWDYLQASNNFRFMTTKNTGVW 360
Query: 361 VDRGIYSTPFDAFTNYMNILGDFISRVDALYPADIDNEELNALLTAIRNQASEIETKEKE 420
++RGIY +P+DAFTNYMNILGDFI RV++LYP DIDNEELN+LLT I+NQ EI KE
Sbjct: 361 LNRGIYDSPYDAFTNYMNILGDFIKRVNSLYPEDIDNEELNSLLTTIKNQGEEIAELHKE 420
Query: 421 KVLLKAKAEKLA 432
L+AKAEK A
Sbjct: 421 VDRLQAKAEKAA 432
>gi|156107500|gb|EDO09245.1| hypothetical protein BACOVA_05105 [Bacteroides ovatus ATCC 8483]
Length = 484
Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats.
Identities = 284/429 (66%), Positives = 342/429 (79%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
M+TICLYFEIHQIIHL+RYRFFDIG DHYYYDDY NE + ++ +RSY+PAL+ L++M+K
Sbjct: 1 MRTICLYFEIHQIIHLKRYRFFDIGNDHYYYDDYANETGMNEVAERSYIPALNALIEMVK 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
+S G FKVAL +SGV +E LE +AP VI+ + +L +TGC EFL EPYSHGL++L NED F
Sbjct: 61 NSGGAFKVALSISGVALEQLEIHAPAVIDLLHQLNETGCCEFLCEPYSHGLSSLANEDCF 120
Query: 121 KAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPH 180
+ EV R K+K+ F PKV RNSSLIYSDEIG + A M FKGM+TEGAKH+LGWKSPH
Sbjct: 121 REEVLRQRDKMKQMFGKEPKVFRNSSLIYSDEIGGLVASMGFKGMLTEGAKHILGWKSPH 180
Query: 181 YLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIF 240
Y+YHC AP LKL+LRD LSDDISLRF+NS+W YPLFAD YIN I P EEQ+ IF
Sbjct: 181 YVYHCNQAPSLKLLLRDFKLSDDISLRFSNSDWAEYPLFADKYINWIDVLPQEEQVINIF 240
Query: 241 MNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYPLSWRD 300
M L++LG+ QPL SNILEF KALPECA+ +GI+FSTPTE+ + KSV +L V YP+SW D
Sbjct: 241 MELSSLGMAQPLSSNILEFLKALPECAKAKGITFSTPTEIVTKLKSVSQLDVAYPMSWVD 300
Query: 301 EERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPVPVG 360
EERD S WLGN MQREAFNKLYS+A+RV + +D RI QDWDYLQAS+NF M+TK +
Sbjct: 301 EERDTSCWLGNVMQREAFNKLYSVAERVHLCDDRRIKQDWDYLQASNNFRFMTTKNNGMW 360
Query: 361 VDRGIYSTPFDAFTNYMNILGDFISRVDALYPADIDNEELNALLTAIRNQASEIETKEKE 420
++RGIY +P+DAFTNYMNILGDFI RVDALYPAD+D+EELN+LLT I+NQ EI EKE
Sbjct: 361 LNRGIYDSPYDAFTNYMNILGDFIKRVDALYPADVDSEELNSLLTTIKNQGDEITELEKE 420
Query: 421 KVLLKAKAE 429
+AKAE
Sbjct: 421 VAKWQAKAE 429
>gi|153807611|ref|ZP_01960279.1| hypothetical protein BACCAC_01893 [Bacteroides caccae ATCC 43185]
gi|149129973|gb|EDM21185.1| hypothetical protein BACCAC_01893 [Bacteroides caccae ATCC 43185]
Length = 483
Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats.
Identities = 280/420 (66%), Positives = 336/420 (80%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
M+TICLYFEIHQIIHL+RYRFFDIG DHYYYDDY NE + ++ +RSY+PAL TL++M K
Sbjct: 1 MRTICLYFEIHQIIHLKRYRFFDIGNDHYYYDDYANETGMNEVAERSYLPALSTLIEMAK 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
S G FKVAL +SGV +E LE +AP VI+ + +L TGC EFL EPYSHGL++L NED F
Sbjct: 61 SSGGAFKVALSISGVALEQLEIHAPAVIDLLHQLNDTGCCEFLCEPYSHGLSSLANEDCF 120
Query: 121 KAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPH 180
+ EV R K+K+ F PKV RNSSLIYSDEIG + A M FKGM+TEGAKHVLGWKSPH
Sbjct: 121 REEVLRQRDKMKQMFGKEPKVFRNSSLIYSDEIGGLVASMGFKGMLTEGAKHVLGWKSPH 180
Query: 181 YLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIF 240
Y+YHC AP LKL+LRD LSDDISLRF+NS+W YPLFAD YIN I P EEQ+ IF
Sbjct: 181 YVYHCNQAPSLKLLLRDFKLSDDISLRFSNSDWAEYPLFADKYINWIDVLPQEEQVINIF 240
Query: 241 MNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYPLSWRD 300
M L+ALG+ QPL SNILEF KALPECAR +GI+FSTPTE+ + KSV +L VPYP+SW D
Sbjct: 241 MELSALGMAQPLSSNILEFLKALPECARAKGITFSTPTEIVTKLKSVSQLDVPYPMSWVD 300
Query: 301 EERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPVPVG 360
EERD S+WLGN +QREAFNKLYS+A+RV +++D RI QDWDYLQAS+NF M+TK +
Sbjct: 301 EERDTSSWLGNVLQREAFNKLYSVAERVHLSDDRRIKQDWDYLQASNNFRFMTTKNTGIW 360
Query: 361 VDRGIYSTPFDAFTNYMNILGDFISRVDALYPADIDNEELNALLTAIRNQASEIETKEKE 420
++RGIY +P+DAFTNYMNILGDFI RV++LYP D+D+EELN+LLT I+NQ EI +KE
Sbjct: 361 LNRGIYDSPYDAFTNYMNILGDFIKRVNSLYPEDVDSEELNSLLTTIKNQGDEITELQKE 420
>gi|150006876|ref|YP_001301619.1| glycoside hydrolase family 57, candidate alpha-glycosidase
[Parabacteroides distasonis ATCC 8503]
gi|149935300|gb|ABR41997.1| glycoside hydrolase family 57, candidate alpha-glycosidase
[Parabacteroides distasonis ATCC 8503]
Length = 430
Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats.
Identities = 233/420 (55%), Positives = 302/420 (71%), Gaps = 1/420 (0%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
MKTIC YF+IHQ L+RYRFFDIG DHYYYDD++NE I I ++ Y+PA T+L+MIK
Sbjct: 1 MKTICFYFQIHQPFRLKRYRFFDIGNDHYYYDDFQNEEIIHRIAEQCYLPANRTILEMIK 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
S G FKVA +SGV +E +E Y PEVI+ +ELA TG VEFL+E Y+H L++LG+ + F
Sbjct: 61 TSGGKFKVAFSISGVALEQMEIYTPEVIDSFKELAATGNVEFLSETYAHSLSSLGDPEEF 120
Query: 121 KAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPH 180
K +VK+ KIK F PKV RN+ LIYSD+I M +EM +KGM+TEGAKH+LGWKSP+
Sbjct: 121 KHQVKKQEDKIKTLFGVKPKVFRNTELIYSDDISAMVSEMGYKGMLTEGAKHILGWKSPN 180
Query: 181 YLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIF 240
Y+Y +AP+L L+L++ S+D+S RF++ W YPL AD Y++ IA+ PD EQI +F
Sbjct: 181 YMYSSCVAPKLSLLLKNDRFSEDLSNRFSDYSWNEYPLTADKYMSWIAATPDSEQIINLF 240
Query: 241 MNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYPLSWRD 300
MN LG P + I EFFKALP A +GISFSTP+EV K V +SVPYP+SW D
Sbjct: 241 MNYEVLGSLHPASTGIFEFFKALPRFAADKGISFSTPSEVFTLIKPVDSISVPYPISWVD 300
Query: 301 EERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPVPVG 360
EERD S+WLGN +Q+EAF K+ I +RVR++ RI QDW YLQ+SD+F MSTK + G
Sbjct: 301 EERDCSSWLGNVLQQEAFRKINEIGERVRLSQTRRIRQDWYYLQSSDHFYYMSTKHMGQG 360
Query: 361 VDRGIYSTPFDAFTNYMNILGDFISRVDALYPADIDNEELNALLTAIRNQASEIETKEKE 420
Y P+DAF NYMN+L DFI RV+A +P +I+NEELN+LL+ I+NQ EIE+ +KE
Sbjct: 361 -GFSPYDNPYDAFNNYMNVLSDFIVRVNAEFPENIENEELNSLLSTIKNQGEEIESLQKE 419
>gi|34541321|ref|NP_905800.1| hypothetical protein PG1683 [Porphyromonas gingivalis W83]
gi|34397637|gb|AAQ66699.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
Length = 428
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 209/420 (49%), Positives = 283/420 (67%), Gaps = 3/420 (0%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
MK ICLYF+IHQ L+RYRFFDIG DHYYYDD+ NE + I Q+ Y+PA + LL+ I
Sbjct: 1 MKHICLYFQIHQPFRLKRYRFFDIGNDHYYYDDFRNEEIMRRITQKCYLPA-NLLLKEII 59
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
+ F+VA +SG +E LE Y+PE ++ ++LA+TGCVEFLAE Y+H L++L + + F
Sbjct: 60 AEHPEFRVAFSISGTALEQLESYSPEALDTFRDLAETGCVEFLAETYAHSLSSLYDPEEF 119
Query: 121 KAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPH 180
+ S++++E F P+VLRN+ LI+SD I AEM F+GM+TEGAKH+LGWKSP+
Sbjct: 120 YNQTMIHSRRMEELFGVKPRVLRNTELIFSDNIATQVAEMGFQGMLTEGAKHILGWKSPN 179
Query: 181 YLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIF 240
YLY AP+L L+LR+ LSD IS F +W YPL AD I I P+EEQI+ +F
Sbjct: 180 YLYKAGSAPELSLLLRNPRLSDAISAMFTRYDWNEYPLTADKMIRWIEETPEEEQIFNLF 239
Query: 241 MNLTALGIEQPLHSNILEFFKALPECARH-RGISFSTPTEVCERAKSVGELSVPYPLSWR 299
MN LG P S I +FF+ALP A+ G+ F+TP+E+ E + V + S YP+SW
Sbjct: 240 MNYEVLGSLHPQESGIFDFFRALPSLAKKSEGVKFATPSELIESSSPVAKFSSIYPISWV 299
Query: 300 DEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPVPV 359
EE+D TWLGN +Q+ A +KL +RVR+ +D R+ QDW YLQ++D+F M T+
Sbjct: 300 GEEKDTGTWLGNVLQQGACDKLEQWGERVRMIDDQRMLQDWLYLQSADHFYYMKTRGGDA 359
Query: 360 GVDRGIYSTPFDAFTNYMNILGDFISRVDALYPADIDNEELNALLTAIRNQASEIETKEK 419
G + Y TP+DAF NYMN+L DF+ RV+A YP+ I+NEEL ALLT IRNQ +I+ E+
Sbjct: 360 G-NFSPYETPYDAFNNYMNVLSDFLLRVEARYPSTIENEELKALLTTIRNQDKQIKKLEE 418
>gi|126648679|ref|ZP_01721163.1| hypothetical protein ALPR1_04538 [Algoriphagus sp. PR1]
gi|126575130|gb|EAZ79480.1| hypothetical protein ALPR1_04538 [Algoriphagus sp. PR1]
Length = 401
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 179/392 (45%), Positives = 257/392 (65%), Gaps = 5/392 (1%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
M+TIC YF++HQ L+ YRFFDIG DH+Y+DD+ N + + Q+ Y+P LL++I+
Sbjct: 1 MRTICFYFQVHQPFRLKPYRFFDIGDDHHYWDDFSNRSIMRKVAQKCYLPMNALLLELIQ 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
+G FKV+ +SG ++ ++ YAP+V+E Q+L TG VE L E YSH LA+L ++D F
Sbjct: 61 KYDGAFKVSFSISGTFMDQMQAYAPDVLESFQKLVATGHVELLNETYSHSLASLKSKDEF 120
Query: 121 KAEVKRLSKKIKEYFD-YTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSP 179
K V + +KI F+ Y P V RN+ LIYSDEIG M AEM ++ M+TEGAKH+LGWKSP
Sbjct: 121 KDLVNKHQEKISNLFNGYKPTVFRNTELIYSDEIGAMIAEMGYEAMLTEGAKHILGWKSP 180
Query: 180 HYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGI 239
+Y+Y ++ P+LK++L++ LSDDI+ RF N W+ YPL D +I+ I P E++ +
Sbjct: 181 NYVYVNSVEPKLKILLKNFQLSDDIAFRFGNKSWDDYPLTVDKFIDWINEIPKEDETLNL 240
Query: 240 FMNLTALGIEQPLHSNILEFFKALPECARHR-GISFSTPTEVCERAKSVGELSVPYPLSW 298
FM+ G Q + I +F K LPE ++ +FSTP+EV ++ VG++ VP P+SW
Sbjct: 241 FMDYETFGEHQWAETGIFDFMKHLPEAVFNKTDFNFSTPSEVAKKISPVGKIHVPIPISW 300
Query: 299 RDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPVP 358
DEERD++ WLGN +Q EAF++LY + V +D I +DW YLQ SD+F M TK
Sbjct: 301 ADEERDLTAWLGNDLQDEAFDRLYDLEKLVNTIDDEEIQRDWRYLQTSDHFYYMCTKFFS 360
Query: 359 VGVDRGIYS---TPFDAFTNYMNILGDFISRV 387
G +S +P+DAF NYMN+L DF+ R+
Sbjct: 361 DGDIHSYFSPYDSPYDAFINYMNVLSDFMIRL 392
>gi|67941056|ref|ZP_00533320.1| Alpha-amylase [Chlorobium phaeobacteroides BS1]
gi|67912732|gb|EAM62316.1| Alpha-amylase [Chlorobium phaeobacteroides BS1]
Length = 525
Score = 348 bits (894), Expect = 4e-94, Method: Composition-based stats.
Identities = 194/464 (41%), Positives = 290/464 (62%), Gaps = 12/464 (2%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
MK+IC YF++HQ LR YRFFDIG H Y+D++EN + + ++SY+P LL++IK
Sbjct: 1 MKSICFYFQVHQPFRLRTYRFFDIGDKHNYFDEHENAFIMQRVAEKSYLPMNSLLLKLIK 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
+ FKV+ +SG+ +E E YAPEVI+ ++LA TG VEFL E Y+H LA+L + F
Sbjct: 61 EYGSAFKVSFSISGIALEQFEAYAPEVIKSFKKLADTGNVEFLTETYAHSLASLKSPKEF 120
Query: 121 KAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPH 180
+ +V++ S+ IK++F TP RN+ L+YSD IG M A + ++ M+TEGAKHVLGWKSP+
Sbjct: 121 ERQVRKQSELIKKHFGVTPTTFRNTELVYSDNIGEMVANLGYELMLTEGAKHVLGWKSPN 180
Query: 181 YLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIF 240
YLY+ A+ P+LKL+L++ LSDDI+ RF++ W+GYPL A+ Y + + D++++ +F
Sbjct: 181 YLYNSALKPELKLLLKNFKLSDDIAFRFSDQSWDGYPLTAEKYTEWLLNIDDKDEVINLF 240
Query: 241 MNLTALGIEQPLHSNILEFFKALP-ECARHRGISFSTPTEVCERAKSVGELSVPYPLSWR 299
M+ G Q + I +F KALP E + F+TP+E+ + + VG + VPYP+SW
Sbjct: 241 MDYETFGEHQWAETGIFDFMKALPGEILKTGQFRFNTPSELAKLLQPVGPIHVPYPISWA 300
Query: 300 DEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPVPV 359
DEERDV+ WLGN +Q EAF KLY++ +V+ + + + W +LQ SD+F M TK
Sbjct: 301 DEERDVTAWLGNDLQDEAFGKLYALEAKVKNCDSPELLKTWSFLQTSDHFYYMCTKWFSD 360
Query: 360 G-VDR--GIYSTPFDAFTNYMNILGDFISRVDALYPAD-IDNEELNALLTAIRNQASEIE 415
G V + Y TP++AF NYMN+L DFI +V+ + D E + ++ +A +I
Sbjct: 361 GDVHKYFNPYGTPYEAFINYMNVLSDFILQVENCETSSGNDVAEFKQAASNLKEKAEKIV 420
Query: 416 TKEKEKVLLKAK--AEK-----LANENDKLRAKLEQYEKSDKPK 452
K+ K K A+K +A+ D A L++ K PK
Sbjct: 421 RKKVNTATEKVKTVAQKGSDITMADIKDMSNATLKKLLKEIDPK 464
>gi|94986775|ref|YP_594708.1| alpha-amylase [Lawsonia intracellularis PHE/MN1-00]
gi|94731024|emb|CAJ54387.1| alpha-amylase [Lawsonia intracellularis PHE/MN1-00]
Length = 428
Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats.
Identities = 159/390 (40%), Positives = 223/390 (57%), Gaps = 3/390 (0%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
M +IC YF++HQ LR Y FF+IG + +Y D+ N + + + Y+P LL++I
Sbjct: 1 MPSICFYFQVHQPFRLRNYSFFEIGVNPFYEDEEHNRHVMHKVARGCYLPMNRLLLKLIH 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
+ FK++ +SG +E ERY+PEVI QELA TGCVEFL E Y H LA + + F
Sbjct: 61 QYDQKFKISFSISGTALEQFERYSPEVITTFQELADTGCVEFLTETYYHSLAFMFSPYEF 120
Query: 121 KAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPH 180
K +V ++IKE F TP V RN+ LIY++E+ + M + G++ EGA H+L W+SP+
Sbjct: 121 KEQVTLHQQRIKELFKITPHVFRNTELIYTNELAKCIENMGYIGILAEGADHILNWRSPN 180
Query: 181 YLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIF 240
Y+Y LKL+L++ LSDDI+ RF+N +W GYPL A+ + I + +F
Sbjct: 181 YVYRPLGCNNLKLLLKNYRLSDDIAFRFSNKDWIGYPLTAERFTQWINDSGGSNETINLF 240
Query: 241 MNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYPLSWRD 300
M+ G Q + I F +ALP F TPTEV V EL +PYP+SW D
Sbjct: 241 MDYETFGEHQWADTGIFAFMEALPHYLLQSNNQFLTPTEVATTFTPVAELDIPYPVSWAD 300
Query: 301 EERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPVPVG 360
ERD++ W GN MQ++A +LY + VR +I W LQ SD+F M TK G
Sbjct: 301 TERDLTAWTGNEMQQDAIERLYRLEPLVREYGCEQILNTWKRLQTSDHFYYMCTKWFSDG 360
Query: 361 -VDR--GIYSTPFDAFTNYMNILGDFISRV 387
V + Y +P+DA+ NYMNIL D SR+
Sbjct: 361 DVHKYFNPYPSPYDAYINYMNILTDLESRI 390
>gi|110637221|ref|YP_677428.1| a-amylase, glycoside hydrolase family 57 protein [Cytophaga
hutchinsonii ATCC 33406]
gi|110279902|gb|ABG58088.1| a-amylase, glycoside hydrolase family 57 protein [Cytophaga
hutchinsonii ATCC 33406]
Length = 397
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 141/387 (36%), Positives = 210/387 (54%), Gaps = 5/387 (1%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
M+++ L F++HQ + Y FFDIG +H Y D N+ + + Y+P LLQ IK
Sbjct: 1 MRSVTLCFQVHQPFRINPYTFFDIGKNHSYEDAAHNKLVVDRVADLCYLPTNKILLQQIK 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
G F+VA +SG IE + Y P+VI+ LAKT CVEFLAE Y H L+++ +++ F
Sbjct: 61 KYKGLFRVAFSISGTTIEQFKLYRPDVIDSFIALAKTDCVEFLAETYYHSLSSIFSKEEF 120
Query: 121 KAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPH 180
+V K I+ F Y +V RN+ LI++++I E+ KGMITEG + +LG S +
Sbjct: 121 LIQVDTHRKLIRSTFGYQTEVFRNTELIHNNDIAATIKELGLKGMITEGVQKLLGTMSTN 180
Query: 181 YLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIF 240
+Y A +ILR+ LSDD++ RF++ W+GYPL + Y + I + + I+
Sbjct: 181 KVYSPA-HTSFPVILRNCKLSDDLAFRFSDKNWKGYPLTVEKYTSWIKKSLKKHENATIY 239
Query: 241 MNLTALGIEQPLHSNILEFFKALP-ECARHRGISFSTPTEVCERAKSVGELSVPYPLSWR 299
++ G Q +S I F + LP GI F TP+EV + + +SW
Sbjct: 240 VDYETFGEHQKKNSGIFTFLRKLPGMLIDTHGIDFMTPSEVIDNLEIHDVYDAHETISWA 299
Query: 300 DEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPVPV 359
D E+++S W NSMQ+EA K+YS+ +R R W LQ SD+F MSTK
Sbjct: 300 DIEKNLSAWYQNSMQKEALEKIYSLEPLIRKMQIRRHTDKWSKLQTSDHFYYMSTKGYSD 359
Query: 360 GVDRGIYS---TPFDAFTNYMNILGDF 383
G +S +P DA+ +YMN++ DF
Sbjct: 360 GEVHQYFSPFASPHDAYIHYMNVVADF 386
>gi|71394079|gb|AAZ32118.1| alpha-amylase/alpha-mannosidase [uncultured euryarchaeote Alv-FOS5]
Length = 393
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 143/402 (35%), Positives = 219/402 (54%), Gaps = 33/402 (8%)
Query: 4 ICLYFEIHQIIHLRRYRFF---DIGTDHYYYDD---------YENERSITDIVQRSYMPA 51
I + F +HQ LRR+ F ++ + Y+D+ Y N+ + Y+PA
Sbjct: 3 IAMCFHVHQPFRLRRFSIFSDVNLPPERAYFDNDPENSLNPIYSNKTVFQRATKECYLPA 62
Query: 52 LDTLLQMIKDSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGL 111
+ +L+ +N K ++G +ES R+ E ++ +Q +A TG VEFL E Y H L
Sbjct: 63 TNIILE---HANVGRKFCYSVTGTWVESAMRFGQEALDIMQSVASTGNVEFLGETYFHSL 119
Query: 112 AALGNEDS-FKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGA 170
A L N+ S F +V + ++E+FDY P+V RN+ LIY + IG + FK + EGA
Sbjct: 120 AGLYNDLSEFDEQVNMHKEMLREFFDYKPRVFRNTELIYDNRIGERVESLGFKAQVIEGA 179
Query: 171 KHVLGWKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQ 230
+ VLGW++P Y+Y L+L+ R LSDDI RF+N W +PL AD Y + +++
Sbjct: 180 EKVLGWRAPTYVYK-RKGGDLRLLTRHYRLSDDIGFRFSNQSWSEWPLTADKYADWVSNV 238
Query: 231 PDEEQIYGIFMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGEL 290
P E + ++++ G + ILEF + LP+ RG+ TP+E+ ++ + EL
Sbjct: 239 PGEYIL--VYVDYETFGEHHKRETGILEFLRHLPDELEKRGVRLVTPSEIIKKHEPKDEL 296
Query: 291 SVPYPLSWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFS 350
VP P+SW D +RDVSTWLGN +Q+ AF KL S+ N +R+ + W LQ SD+
Sbjct: 297 DVPEPISWADVDRDVSTWLGNPLQQYAFKKLQSLR-----LNTNRLKRIWRLLQTSDHLY 351
Query: 351 AMSTKPVPVGVDRGI------YSTPFDAFTNYMNILGDFISR 386
+S K G+D + Y++P+DAF N+MNIL D R
Sbjct: 352 YLSKK---TGMDGWVHQYFSPYNSPYDAFINFMNILDDLKRR 390
>gi|20092845|ref|NP_618920.1| alpha-amylase [Methanosarcina acetivorans C2A]
gi|19918148|gb|AAM07400.1| alpha-amylase [Methanosarcina acetivorans C2A]
Length = 396
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 141/393 (35%), Positives = 217/393 (55%), Gaps = 9/393 (2%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
M ++C+YF++HQ LRR+ D Y+D+ N+ + ++ Y PA LL I
Sbjct: 1 MTSVCMYFQVHQPFRLRRFWPDDRSGFFRYFDERSNKEIFERVSRKCYTPANRVLLDSID 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDS- 119
+ G F+ +L ++G +E E + EV+E +ELA+TG VEFL E + H L++L + +
Sbjct: 61 EHKGEFRFSLSITGTLLEQCELWGEEVLESFRELAETGAVEFLDETFYHSLSSLFEDKTE 120
Query: 120 FKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSP 179
F EVK K + + P+V RN+ L+Y++ I ++A+E+ + ++TEGA H+L +SP
Sbjct: 121 FIEEVKEHRKIVSDLLGVKPQVFRNTELLYNNSIAKIASELGYSAILTEGADHMLDGRSP 180
Query: 180 HYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGI 239
+ Y A L ++ R+ LSDDI RF+ WEGYPL A+ + + + +E I
Sbjct: 181 NVPYR-AKGSGLPILFRNYKLSDDIGYRFSARWWEGYPLTAEKW--ALWASGVKEDCINI 237
Query: 240 FMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVP--YPLS 297
FM+ G Q + I EF K LPE G+ FSTP+EV + V E+ + +S
Sbjct: 238 FMDYETFGEHQWEETGIFEFLKKLPEEVLKNGMEFSTPSEVARKYSPVAEIDIGDFSTIS 297
Query: 298 WRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPV 357
W D ERD S WLGN MQR F ++ + V+ D I + W +L SD++ M TK +
Sbjct: 298 WADMERDTSAWLGNDMQRRCFEEIKLLEPFVKKTGDPEILRIWKHLLTSDHYYYMCTKWL 357
Query: 358 PVGVDR---GIYSTPFDAFTNYMNILGDFISRV 387
G ++STPF+A N+M +L DF +RV
Sbjct: 358 GDGDVHSYFSVHSTPFEAAVNFMAVLMDFKARV 390
>gi|21226964|ref|NP_632886.1| Alpha-amylase [Methanosarcina mazei Go1]
gi|20905277|gb|AAM30558.1| Alpha-amylase [Methanosarcina mazei Go1]
Length = 398
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 139/393 (35%), Positives = 221/393 (56%), Gaps = 9/393 (2%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
M ++C+YF++HQ LRR+ D Y+D+ N + ++ Y+PA TLL+ I
Sbjct: 1 MTSLCMYFQVHQPFRLRRFWPDDRPGFFRYFDERSNREIFERVARKCYIPANRTLLESID 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDS- 119
+ G FK +L ++G +E E + EV+E +++LA+TG VE L E + H L++L + +
Sbjct: 61 EHKGEFKFSLSITGTLLEQCELWGGEVLESVRQLAETGAVEILEETFYHSLSSLFEDKTE 120
Query: 120 FKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSP 179
F EVK + + + P++ RN+ L+Y++ I ++ +++ +K ++TEGA H+L +SP
Sbjct: 121 FIEEVKEHREMVSDLLGVKPQIFRNTELLYNNSIAKIVSDLGYKAILTEGADHMLEGRSP 180
Query: 180 HYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGI 239
+ LY A L ++ R+ LSDDI RF+ WEGYPL A+ + + AS E+ I I
Sbjct: 181 NVLYK-AKDSGLPILFRNYKLSDDIGYRFSARWWEGYPLTAEKWAS-WASGVKEDCI-NI 237
Query: 240 FMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVP--YPLS 297
FM+ G Q + I +F + LP G+ FSTP E+ E+ V E+ V +S
Sbjct: 238 FMDYETFGEHQWRETGIFDFVEKLPAEVLKNGLEFSTPVELTEKYLPVAEIDVGDFSTIS 297
Query: 298 WRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPV 357
W D ERD S WLGN MQR F ++ + V+ D I + W +L SD++ M TK +
Sbjct: 298 WADMERDTSAWLGNDMQRRCFEEIRLLEPFVKKTEDPEILRIWKHLLTSDHYYYMCTKWL 357
Query: 358 PVGVDR---GIYSTPFDAFTNYMNILGDFISRV 387
G ++STPF+A N+M +L DF ++V
Sbjct: 358 GDGDVHSYFSVHSTPFEAAVNFMAVLMDFKAQV 390
>gi|73668084|ref|YP_304099.1| alpha-amylase [Methanosarcina barkeri str. Fusaro]
gi|72395246|gb|AAZ69519.1| alpha-amylase [Methanosarcina barkeri str. Fusaro]
Length = 398
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 130/393 (33%), Positives = 212/393 (53%), Gaps = 9/393 (2%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
M ++C+YF+ HQ LRR+ D Y+D+ N + ++ Y+P LL +
Sbjct: 1 MTSVCMYFQAHQPFRLRRFWPDDRSGFFRYFDERSNREIFERVARKCYIPTNKLLLDALD 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDS- 119
+ G F+ +L ++G +E E + + +E +++A+TG VEFL E + H L++L + +
Sbjct: 61 EHKGEFRFSLSVTGTLLEQCELWGKDALEGFRQMAETGAVEFLDETFYHSLSSLFEDKTE 120
Query: 120 FKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSP 179
F E+K + + + P+V RN+ L+Y++ I ++ +++ ++ ++TEGA H+L +SP
Sbjct: 121 FIEEIKEHREIMFDLLGVKPQVFRNTELLYNNTIAKLVSDLGYRAILTEGADHMLEGRSP 180
Query: 180 HYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGI 239
+ LY A L +I R+ LSDDI RF+ WEGYPL A + + + + E I
Sbjct: 181 NVLYR-AKGSGLPIIFRNYKLSDDIGYRFSAGWWEGYPLTAKKW--ALWASGNNEDCVNI 237
Query: 240 FMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVP--YPLS 297
FM+ G Q + I F K LP + FSTP+E+ ++ V ++ V +S
Sbjct: 238 FMDYETFGEHQWEETGIFSFLKELPGEVLKTHLDFSTPSELVDKYTPVADIDVGDFSTIS 297
Query: 298 WRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPV 357
W D ERD S WLGN MQR F ++ + VR D I + W +L SD++ M TK +
Sbjct: 298 WADMERDTSAWLGNDMQRRCFEEIKLLEPFVRKTEDPEILRIWKHLLTSDHYYYMCTKWL 357
Query: 358 PVGVDR---GIYSTPFDAFTNYMNILGDFISRV 387
G ++STPFDA N+M +L DF ++V
Sbjct: 358 GDGDVHSYFSVHSTPFDAAVNFMAVLMDFKAQV 390
>gi|85858687|ref|YP_460889.1| alpha-amylase [Syntrophus aciditrophicus SB]
gi|85721778|gb|ABC76721.1| alpha-amylase [Syntrophus aciditrophicus SB]
Length = 395
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 135/389 (34%), Positives = 202/389 (51%), Gaps = 6/389 (1%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
M ICL F++H+ + L+RY FFDIG H Y D N R + + Y+PA LL++++
Sbjct: 1 MPGICLCFQVHRPVILKRYTFFDIGRHHLYEDQEANRRILNQLADSCYLPANRLLLRLME 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
S G F+VA LSG I E+Y +++E + LA TGCVEFL E H LA L + F
Sbjct: 61 KSEGRFRVAFALSGAMIHLCEKYRQDIMEGFRRLADTGCVEFLNEADPHSLAFLFSPREF 120
Query: 121 KAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPH 180
+ +++ KKI+E F P + LIYS+E+ +A EM + EG + + G++ P
Sbjct: 121 REQIEAHKKKIQELFGQNPTTFHCTDLIYSNELAGVAEEMGHSAFLAEGGQGLPGFQGPD 180
Query: 181 YLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEE--QIYG 238
++Y A +LKL+LR+ LS DI L F++ G+P A + +I + Q+
Sbjct: 181 FVYQPADCARLKLLLRNYHLSADIRLHFSDGSRNGHPFPAGWFAERILHSLENSGGQVVN 240
Query: 239 IFMNLTALGIEQPLHSNILEFFKAL-PECARHRGISFSTPTEVCERAKSVGELSVPYPLS 297
+F++ G EF +AL E F P E+ +R L V S
Sbjct: 241 LFLDYETSGKYLTPDRGNSEFLQALSAEMLGQPDFHFQLPAEIAQRYDPQARLDVTDSAS 300
Query: 298 WRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPV 357
D R+++T GN+MQ++A LY + + VR D+ W LQ SD F+ M T+
Sbjct: 301 GFDIHRNLTTVAGNAMQQDALRVLYDLEEAVRKRKDADCLAIWRMLQTSDYFNYMCTEGF 360
Query: 358 PVGV---DRGIYSTPFDAFTNYMNILGDF 383
V D G Y +P++++ NYMNIL DF
Sbjct: 361 ADRVRRRDSGPYGSPYESYINYMNILEDF 389
>gi|119719053|ref|YP_919548.1| Alpha-amylase [Thermofilum pendens Hrk 5]
gi|119524173|gb|ABL77545.1| Alpha-amylase [Thermofilum pendens Hrk 5]
Length = 518
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 137/408 (33%), Positives = 212/408 (51%), Gaps = 25/408 (6%)
Query: 1 MKTICLYFEIHQIIHL-------------RRYRFFDIGTDHYYYDDYENERSITDIVQRS 47
MK + FE+HQ L R+ + + Y+DD N R + +R
Sbjct: 1 MKHVVFMFEVHQPYRLSRNIRGTLSELTARKGKITAEDLERVYFDDELNRRIFERVSKRC 60
Query: 48 YMPALDTLLQMI---KDSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLA 104
Y+PA + + M+ KDS FKV+ LSGV +E E++ PEVIE + LAKTG VEFL
Sbjct: 61 YLPANNVIRDMVEFFKDSGKPFKVSYSLSGVLLEQAEKWYPEVIESFRSLAKTGMVEFLD 120
Query: 105 EPYSHGLAALGNEDSFKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKG 164
+ Y H LA L E+ +V+ + ++++ P + N+ Y++ + + ++ +K
Sbjct: 121 QTYYHSLAFLFAEEELLEQVREHREALRKHLGVEPTAVENTEFTYNNYLACLFDKLGYKV 180
Query: 165 MITEGAKHVLGWKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYI 224
++TEG + VLGW+SP+YLY A +++++R+ LSDDI RF W YPL AD Y
Sbjct: 181 ILTEGVERVLGWRSPNYLYK-AKGCNIRVLMRNYRLSDDIGFRFGARWWSEYPLTADKYS 239
Query: 225 NKIASQPDEEQIYGIFMNLTALGIEQPLHSNILEFFKALP-ECARHRGISFSTPTEVCER 283
+++ P E + I + G P + I EF + LP E + + STP+EV ER
Sbjct: 240 AWLSATPGEVILVAI--DYETFGEHFPAETGIFEFLRWLPGEILKWGNLVTSTPSEVAER 297
Query: 284 AKSVGELSVPY--PLSWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWD 341
E+ VP +SW D ERD+S W+GN MQ AF ++ + +++ D + + W
Sbjct: 298 LTPRDEVDVPVESTISWADLERDLSAWIGNFMQNNAFTRMKDLWLQIKAVRDRGLERLWK 357
Query: 342 YLQASDNFSAMSTK---PVPVGVDRGIYSTPFDAFTNYMNILGDFISR 386
L SD++ MSTK P V Y +PF+A+ + LGD +R
Sbjct: 358 LLSISDHYYYMSTKGGGPGDVHSYFSPYGSPFEAYMFFSEALGDLETR 405
>gi|91772483|ref|YP_565175.1| Alpha-amylase [Methanococcoides burtonii DSM 6242]
gi|91711498|gb|ABE51425.1| Alpha-amylase [Methanococcoides burtonii DSM 6242]
Length = 400
Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 123/389 (31%), Positives = 211/389 (54%), Gaps = 9/389 (2%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
M+++C+YF++HQ L+ + D Y+D N + ++ Y+PA L +++
Sbjct: 1 MRSVCMYFQLHQPYRLKWFWPDDSKGFERYFDVAINRSIFEKVARKCYLPATTLLAELVD 60
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAAL-GNEDS 119
G FK ++ ++G + E++ P+V++ +LA + VEF+ E H LA L +++
Sbjct: 61 QHEGNFKFSVSITGTLLSQCEKWNPDVLDIFTQLADSKRVEFIDETNYHSLAGLFDDKNE 120
Query: 120 FKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSP 179
F+ ++ + + P+V RN+ L+Y++ I + M +K ++TEG +L +SP
Sbjct: 121 FREQILEHHELTSDLLGVKPQVFRNTELLYNNSIAETVSSMGYKAILTEGVDQLLDSRSP 180
Query: 180 HYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGI 239
+++Y A L ++LR+ +SDDI RF+ WE YPL AD + N +++ + I
Sbjct: 181 NHVYK-AKDCGLPVLLRNYKMSDDIGYRFSARWWEEYPLTADKWANWASTE--QGDCMNI 237
Query: 240 FMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVP--YPLS 297
FM+ G Q S I +F +ALP +G+ F+TP+E+ E+ + VGE+ V +S
Sbjct: 238 FMDYETFGEHQWSDSGIFDFLRALPGEVLGKGLEFNTPSEIVEKYEPVGEVDVGDFNTIS 297
Query: 298 WRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPV 357
W D ERD S WLGN MQR F + + V+ ND ++ W +L SD++ MSTK +
Sbjct: 298 WADMERDTSAWLGNDMQRRCFEEAKLLGPYVKRTNDPKLINIWRHLLTSDHYYYMSTKWL 357
Query: 358 PVGVDR---GIYSTPFDAFTNYMNILGDF 383
G I+++P+DA N++ L DF
Sbjct: 358 GDGDVHSYFSIHTSPYDAAINFIAALLDF 386
>gi|116753574|ref|YP_842692.1| Alpha-amylase [Methanosaeta thermophila PT]
gi|116665025|gb|ABK14052.1| Alpha-amylase [Methanosaeta thermophila PT]
Length = 495
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 130/405 (32%), Positives = 205/405 (50%), Gaps = 24/405 (5%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGT--------DHYYYDDYENERSITDIVQRSYMPAL 52
M I + FE+HQ L++ FF G+ +Y+DD EN + ++ Y+PA
Sbjct: 5 MTDISISFEVHQPFRLKK-EFFWSGSIFRRTRPHHDFYFDDIENRNVFERVAEKCYLPAN 63
Query: 53 DTLLQMIK---DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSH 109
+L++IK D++ FKVA LSGV +E RY P+V++ E+ TG VE L + Y H
Sbjct: 64 RIMLELIKRFSDTDRPFKVAYSLSGVFVEQCRRYRPDVLDTFIEMVDTGNVEILDQTYYH 123
Query: 110 GLAALGNEDSFKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEG 169
L +L + F+ +V+ + + + F P + N+ LIY+DEI MA +M ++G+ EG
Sbjct: 124 SLTSLFDRKEFREQVRMHRELMWDIFGVKPTIFENTELIYNDEIAAMAEDMGYRGIFAEG 183
Query: 170 AKHVLGWKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIAS 229
P+++Y + L+LR+ L+DDI RF++ WE +PL AD Y +A+
Sbjct: 184 V-----IADPNHVYRPEGCRSISLLLRNYQLTDDIGFRFSSRNWEEFPLTADKYAAWLAA 238
Query: 230 QPDEEQIYGIFMNLTALGIEQPLHSNILEFFKALP-ECARHRGISFSTPTEVCERAKSVG 288
P + +FM+ G + I EF + LP E + + + FSTP E+ ER +
Sbjct: 239 TPG--RCINLFMDYETFGEHHWPETGIFEFLRCLPGEILKWKNLRFSTPAEIVERVEPSR 296
Query: 289 ELSVPYPLSWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDN 348
+SV SW D ERD S WLGN++Q + L ++ R A + + + W L SD+
Sbjct: 297 TVSVRSARSWADLERDTSCWLGNALQWACYTYLQNLQGPSREAGEDTL-RIWRLLSLSDH 355
Query: 349 FSAMSTK---PVPVGVDRGIYSTPFDAFTNYMNILGDFISRVDAL 390
+ T P V Y P+DA Y ++L D R+ +
Sbjct: 356 LYYIFTHGGGPGEVHSYFSPYGNPYDAAVTYFSVLSDLHRRLSEI 400
>gi|150402461|ref|YP_001329755.1| Alpha-amylase [Methanococcus maripaludis C7]
gi|150033491|gb|ABR65604.1| Alpha-amylase [Methanococcus maripaludis C7]
Length = 407
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 137/397 (34%), Positives = 213/397 (53%), Gaps = 23/397 (5%)
Query: 4 ICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYE-NERSITDIVQRSYMPALDTLLQMIKDS 62
+ L FE+HQ LR+ + G Y D E N+ + + Y+P+ +L++I +
Sbjct: 3 LSLNFEVHQPNRLRKSVNSNSGDLWNRYVDVELNKEIFNKVADKCYIPSNMIMLELIDNY 62
Query: 63 NGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNE-DSFK 121
+ +++ ++GV +E + EV+E ++LAKTG VEFL E Y H L++L E D FK
Sbjct: 63 D--IEISYSITGVFLEQALEFNEEVVELFRDLAKTGNVEFLGETYHHSLSSLFEEHDEFK 120
Query: 122 AEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPHY 181
++ K IKE F Y RN+ LI++++I EM F GM TEG +L W+SP+Y
Sbjct: 121 EDILEHKKLIKELFGYKTTTFRNTELIFNNKIAETIKEMGFNGMFTEGTNRILDWRSPNY 180
Query: 182 LYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIFM 241
+Y + L ++LR+ LSDDI RF++ +W+ YPL AD Y N +++ P + ++M
Sbjct: 181 VY--SSLSGLNVLLRNYNLSDDIGFRFSSRDWKEYPLMADKYANWLSNTPGD--CINLYM 236
Query: 242 NLTALGIEQPLHSNILEFFKALP-ECARHRGISFSTPTEVCERAKSVGELSV--PYPLSW 298
+ G Q + I EF + LP E H I ++TP+E+ E KS + V LSW
Sbjct: 237 DYETFGEHQWYDTGIFEFLRHLPKELDNHNHIEYATPSEIFELCKSKDTIDVFEFSTLSW 296
Query: 299 RDEERDVSTWLGNSMQREAFNKLYSIA---DRVRIANDSRINQD------WDYLQASDNF 349
D ERD+S WLG+ MQ+ +F KL I ++ D + ++ + +Q SDNF
Sbjct: 297 ADSERDISAWLGSKMQQLSFQKLKEIRGYLNQYLQQFDEKERKELIEYKIYKNMQTSDNF 356
Query: 350 SAMSTK---PVPVGVDRGIYSTPFDAFTNYMNILGDF 383
M TK + V +STP+DA+ Y++ DF
Sbjct: 357 YYMCTKGFNDMDVHSYFSHFSTPYDAYAAYLDTYYDF 393
>gi|15669807|ref|NP_248621.1| alpha-amylase (amyA) [Methanocaldococcus jannaschii DSM 2661]
gi|2492899|sp|Q59006|AMYA_METJA Putative alpha-amylase
gi|1592212|gb|AAB99631.1| alpha-amylase (amyA) [Methanocaldococcus jannaschii DSM 2661]
Length = 467
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 139/400 (34%), Positives = 211/400 (52%), Gaps = 30/400 (7%)
Query: 4 ICLYFEIHQIIHLRRYRFFDIGTD-----HYYYDDYENERSITDIVQRSYMPALDTLLQM 58
I FE+HQ L + +I + Y D N+ + + Y+P + +L++
Sbjct: 3 ITFNFEVHQPHRLNK----EINQNGNTLWEKYVDTKLNKEVFNKVANKCYIPTNELILEL 58
Query: 59 IKDSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAAL-GNE 117
I + + FKV ++GV +E + V++ ++L KTG VE +AE Y H L +L E
Sbjct: 59 IDEYD--FKVNYSITGVFVEQALEFNDYVLDLFKDLVKTGNVELIAETYHHSLTSLFETE 116
Query: 118 DSFKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWK 177
D F +++ K KE F + KV RN+ LIY++ I ++A ++ FK + TEG + +LGW+
Sbjct: 117 DEFIEDIEMHRKMYKEIFGFKAKVFRNTELIYNNRIAKIAKDLGFKAIFTEGIEKILGWR 176
Query: 178 SPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIY 237
SP+YLY +K++LR+ LSDDI RF+ +W+ YPL AD Y +AS P E +
Sbjct: 177 SPNYLYQSPDG--MKILLRNYRLSDDIGFRFSARDWDQYPLTADKYAIWLASTPGE--VI 232
Query: 238 GIFMNLTALGIEQPLHSNILEFFKALP-ECARHRGISFSTPTEVCERAKSVGELSVP--Y 294
I+M+ G + I EF + LP E A+H + +EV +R + GE+ V
Sbjct: 233 NIYMDYETFGEHHWKETGIFEFLRYLPIEIAKHEHLEVVNVSEVVDRLEPRGEIYVHEFA 292
Query: 295 PLSWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDS--------RINQDWDYLQAS 346
+SW D ERDVS WLGN MQR +F KL I ++ ++ I + + LQ S
Sbjct: 293 TISWADTERDVSAWLGNKMQRISFEKLKDIGKFIKENSNKLKKLNKFDEIYKMYKVLQTS 352
Query: 347 DNFSAMSTKPVPVGVDRGIYS---TPFDAFTNYMNILGDF 383
DN S K + +S TPFDA+ +Y+NIL DF
Sbjct: 353 DNLYYQSIKGLSDMSVHNYFSHFDTPFDAYASYLNILYDF 392
>gi|150400450|ref|YP_001324216.1| Alpha-amylase [Methanococcus aeolicus Nankai-3]
gi|150013153|gb|ABR55604.1| Alpha-amylase [Methanococcus aeolicus Nankai-3]
Length = 580
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 160/515 (31%), Positives = 245/515 (47%), Gaps = 80/515 (15%)
Query: 4 ICLYFEIHQIIHLRRYRFFDIGTDHY-------------YYDDYENERSITDIVQRSYMP 50
I FE+HQ L +Y I D Y D N+ + + Y+P
Sbjct: 3 ISFNFEVHQPHRLNKYIKNGINIDKIKNTNNNNHNLWDRYIDVPLNKEVFNKVANKCYIP 62
Query: 51 ALDTLLQMIKDSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHG 110
+L +I + K+A ++GV +E + EV++ ++L KTG VE + E Y H
Sbjct: 63 TNRIMLDLIDKHD--IKIAYSITGVFLEQAMEFNDEVLDLFKDLVKTGNVELIGETYHHS 120
Query: 111 LAAL-GNEDSFKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMK-FKGMITE 168
L++L D FK ++ R K IK+ F+Y +V RN+ LIY + I + ++ FKG+ TE
Sbjct: 121 LSSLFETHDEFKEDILRHKKLIKDLFNYKTEVFRNTELIYHNSIAKTVKDIGGFKGIFTE 180
Query: 169 GAKHVLGWKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIA 228
GA +L W+SP+Y+Y L ++LR+ LSDD+ RF+ WE YPL+AD Y +A
Sbjct: 181 GADRLLDWRSPNYVYDSLCG--LNVLLRNYQLSDDVGFRFSCCGWEDYPLYADKYAKWLA 238
Query: 229 SQPDEEQIYGIFMNLTALGIEQPLHSNILEFFKALP-ECARHRGISFSTPTEVCERAKSV 287
+ P + I+++ G Q + I EF K LP E ++ + ++ PTE+ ++ +
Sbjct: 239 NTPGD--CINIYVDYETFGEHQWKETGIFEFLKELPNEIEKYSHLEYAKPTEILDKCRPK 296
Query: 288 GELSVP--YPLSWRDEERDVSTWLGNSMQREAFNKLYSI--------------------- 324
GE+ V LSW D ERD+S WLGN +Q+ +F+KL SI
Sbjct: 297 GEIDVFEFSALSWADTERDISAWLGNRLQKTSFDKLKSIREPLGRYIQTNNKNSKNNNSN 356
Query: 325 -ADRVRIAND-------SRINQDWDYLQASDNFSAMSTK---PVPVGVDRGIYSTPFDAF 373
D + ND RI ++ LQ SDNF TK + V + TP+DAF
Sbjct: 357 TTDTATLDNDLYDEIMEYRIYKN---LQTSDNFYYQCTKGFNDMDVHAYFSHFETPYDAF 413
Query: 374 TNYMNILGDF-----ISRVDALYPADI----------------DNEELNALLTAIRNQAS 412
YM+I+ DF IS++ +Y + +NE+ + L I +
Sbjct: 414 VAYMDIVYDFKTHLTISQILEIYKEKLNRLNNELNELKELNKKENEDTSELNNIINDLKD 473
Query: 413 EIETKEKEKVLLKAKAEKLANENDKLRAKLEQYEK 447
+I+ E + L +KL E L KL+QYEK
Sbjct: 474 KIKNMELQLNLKDENIQKLKEEGVNLVNKLKQYEK 508
>gi|48478312|ref|YP_024018.1| alpha-amylase [Picrophilus torridus DSM 9790]
gi|48430960|gb|AAT43825.1| alpha-amylase [Picrophilus torridus DSM 9790]
Length = 374
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 130/383 (33%), Positives = 203/383 (53%), Gaps = 20/383 (5%)
Query: 4 ICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIKDSN 63
+ YFE+HQ LR YR +IG +H Y+ D +N +I +R+ M + ++ +
Sbjct: 5 VIFYFEVHQPFRLRPYRISEIGHNHDYFWDEKNR----EIFERASMKCYRPMTTLLNEHE 60
Query: 64 GYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSFKAE 123
K L ++G IE +Y PE+I+ I+ +G E + E Y H L +L + D FK E
Sbjct: 61 --IKSNLSITGTFIEQALKYDPELIDIIKGYVSSGNCELIDETYYHSLVSLYDYDEFKEE 118
Query: 124 VKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPHYLY 183
VK IK+ F+Y PK RN+ LIY+D++ + ++ +K ++TEG ++ +P+Y+Y
Sbjct: 119 VKEHKNIIKKLFNYEPKTFRNTELIYNDDVSYIVRDLGYKTILTEGFYPLIERYNPNYIY 178
Query: 184 HCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIFMNL 243
A L L+LR+ +SDDIS RF+N W YPL AD + + I P + + +FM+
Sbjct: 179 KSASG--LNLLLRNFMMSDDISFRFSNRSWPEYPLTADKFASWIIKSPGD--VINLFMDY 234
Query: 244 TALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYPLSWRDEER 303
G Q + I +F K L + + I + R + +S+ +SW D+ER
Sbjct: 235 ETFGEHQSAETGIFDFMKYLKKYMDYNNIETMLINDAVYRYEKHDTISIKNYVSWADKER 294
Query: 304 DVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMST-KPVPVGVD 362
+++ WLGN MQREAF L S+ ++ D +I W YL SD+ MST P V
Sbjct: 295 NLNPWLGNDMQREAFEYLKSLKNK----GDMKI---WRYLNTSDHLYYMSTGSPEDQEVH 347
Query: 363 R--GIYSTPFDAFTNYMNILGDF 383
Y +P+ AF N+M++L DF
Sbjct: 348 NYFNPYKSPYIAFMNFMSVLRDF 370
>gi|13541262|ref|NP_110950.1| Alpha-amylase [Thermoplasma volcanium GSS1]
gi|14324646|dbj|BAB59573.1| alpha-amylase [Thermoplasma volcanium GSS1]
Length = 378
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 133/386 (34%), Positives = 194/386 (50%), Gaps = 33/386 (8%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
MK + YFEIHQ LR +D+ ++ + D +NE + +RSY+PA L++
Sbjct: 1 MKDVMFYFEIHQPFRLRPTNLYDVKSEQNVFWDEKNEEIFRRVAERSYIPATRNLMEY-- 58
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
K + ++G +E Y +VI+ I + K+G E L+E Y H LA++ N D F
Sbjct: 59 ----GIKSSFSITGTAVEQALMYNTKVIDAIDDYVKSGLCEMLSETYYHSLASIWNYDEF 114
Query: 121 KAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPH 180
K +V +K F+ PKV RN+ LIY D I M M F +ITEG ++ SP+
Sbjct: 115 KRQVDMHRDLMKRIFNVVPKVFRNTELIYDDRIAEMVKRMGFTSIITEGTDSIVKDHSPN 174
Query: 181 YLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIF 240
Y Y A L L LR+ +SD+IS RF+N++W+ YPL AD Y I E + +F
Sbjct: 175 YRY--ASPSGLNLYLRNYVMSDNISFRFSNTKWKDYPLTADKYAKWI--NESEGDMVNLF 230
Query: 241 MNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYPLSWRD 300
M+ G Q + I +F K LP R GI T +E +R + LS+P +SW D
Sbjct: 231 MDYETFGEHQTQETGIFDFMKYLPVYFRDYGIETITISEAEKRHRVKDVLSIPETISWAD 290
Query: 301 EERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPVPVG 360
RD+S WL N MQ + F DR++ + + + W YLQ SD MS +G
Sbjct: 291 TRRDLSAWLENEMQIDTF-------DRIKKCRE-KAGRLWGYLQTSDIIYYMS-----IG 337
Query: 361 VDRGI--------YSTPFDAF--TNY 376
+++ Y +P+ AF TNY
Sbjct: 338 LEQDFTVHEYFNPYKSPYLAFIYTNY 363
>gi|154151079|ref|YP_001404697.1| Alpha-amylase [Candidatus Methanoregula boonei 6A8]
gi|153999631|gb|ABS56054.1| Alpha-amylase [Candidatus Methanoregula boonei 6A8]
Length = 484
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 126/394 (31%), Positives = 193/394 (48%), Gaps = 23/394 (5%)
Query: 1 MKTICLYFEIHQIIHLRRY-----RFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTL 55
M +C+ FE+HQ L R+ + + + Y+D+ N + + ++ Y+PA +
Sbjct: 1 MPEVCIGFEVHQPFRLNRHFSPDPKKKEKDLEALYFDEL-NREVLERVAEKCYLPATRII 59
Query: 56 LQMIKDSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAA-L 114
L + + F SG IE LER+ P+V+ ++A+ E L + Y H +A
Sbjct: 60 LDKLDEG---FCCTFSFSGTLIEQLERWKPDVLSLFDQVARHKNSEILGQTYYHSIAGCF 116
Query: 115 GNEDSFKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVL 174
G++ F + + + + F P V N+ ++++I +M + G+ TEG +L
Sbjct: 117 GDKSEFIEQAGMHADLMYDQFKTRPNVFENTEFTFNNQIASCVKKMGYAGIFTEGVDRIL 176
Query: 175 GWKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEE 234
W+SPH++Y C P ++LRDV LSDDI+ RF N W+ YPL AD Y I+ +
Sbjct: 177 DWRSPHHIYSCNDLP---VLLRDVQLSDDIAFRFGNQGWDKYPLTADTYAGWISGTTGD- 232
Query: 235 QIYGIFMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPY 294
+ IF++ G + I F LPE RG+ PTEV ER VG + V
Sbjct: 233 -VVNIFLDYETFGEHFWKETGIFNFLSYLPEELEKRGVRTILPTEVLERYPPVGTIDVVD 291
Query: 295 PLSWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMST 354
+SW D E+DVS W+GN Q A++ +I A D I W YLQ SD+F M++
Sbjct: 292 TISWADVEKDVSAWMGNERQHTAYS---AIQKAAAFAKDKTI---WRYLQTSDHFYYMAS 345
Query: 355 KPVPVGVDRGIYS--TPFDAFTNYMNILGDFISR 386
K G +S DAF YM++L DF R
Sbjct: 346 KYGTCGEVHNYFSHHEAEDAFKTYMSVLADFEKR 379
>gi|150399352|ref|YP_001323119.1| Alpha-amylase [Methanococcus vannielii SB]
gi|150012055|gb|ABR54507.1| Alpha-amylase [Methanococcus vannielii SB]
Length = 407
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 134/397 (33%), Positives = 216/397 (54%), Gaps = 23/397 (5%)
Query: 4 ICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSI-TDIVQRSYMPALDTLLQMIKDS 62
+ L FE+HQ L++ ++ G Y D R I + + Y+P+ +L++I D
Sbjct: 3 LSLNFEVHQPNRLKKSVNYNSGDLWNRYIDVTLNREIFNKVADKCYIPSNRVILELIDDY 62
Query: 63 NGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAAL-GNEDSFK 121
+ +V+ ++GV +E + EV+E ++L+KTG VEFL E Y H L++L + + FK
Sbjct: 63 D--IEVSYSITGVFLEQALEFNEEVLELFKDLSKTGNVEFLGETYHHSLSSLFEDHEEFK 120
Query: 122 AEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPHY 181
+ K IK+ F Y RN+ LI++++I E+ F+G+ TEGA +LGW+SP+Y
Sbjct: 121 EDAIEHKKIIKDIFGYKTTTFRNTELIFNNKIAETVKELGFRGIFTEGADRILGWRSPNY 180
Query: 182 LYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIFM 241
+YH LK++LR+ LSDDI RF++ +W +PL AD Y +++ + ++M
Sbjct: 181 VYHSTSG--LKVLLRNYNLSDDIGFRFSSRDWVEHPLTADKYSRWLSNTHGD--CINLYM 236
Query: 242 NLTALGIEQPLHSNILEFFKALP-ECARHRGISFSTPTEVCERAKSVGELSV--PYPLSW 298
+ G Q + I EF + LP E ++ I ++TP+E+ E + G L V +SW
Sbjct: 237 DYETFGEHQWKDTGIFEFLRYLPIELEKYENIEYATPSEILEINEPKGTLDVFDFSTVSW 296
Query: 299 RDEERDVSTWLGNSMQREAFNKLYSIAD----RVRIANDSRINQDWDY-----LQASDNF 349
D ERDVS WLGN MQ+ +F KL I + +++ S + +Y +Q SDNF
Sbjct: 297 ADSERDVSAWLGNKMQQSSFQKLSEIREYLGRYIKLFPKSEQKELIEYKIYKNMQTSDNF 356
Query: 350 SAMSTK---PVPVGVDRGIYSTPFDAFTNYMNILGDF 383
M TK + V +S+PFDA+ +Y++ DF
Sbjct: 357 YYMCTKGFSDMDVHSYFSHFSSPFDAYASYLDAHYDF 393
>gi|134045347|ref|YP_001096833.1| Alpha-amylase [Methanococcus maripaludis C5]
gi|132662972|gb|ABO34618.1| Alpha-amylase [Methanococcus maripaludis C5]
Length = 407
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 133/397 (33%), Positives = 209/397 (52%), Gaps = 23/397 (5%)
Query: 4 ICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYE-NERSITDIVQRSYMPALDTLLQMIKDS 62
+ L FE+HQ LR+ + G Y D E N+ + + Y+P+ +L++I +
Sbjct: 3 LSLNFEVHQPNRLRKSVNLNSGDLWGRYVDVELNKEIFNKVADKCYIPSNMIMLELIDNY 62
Query: 63 NGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNE-DSFK 121
+ +++ ++GV +E + EV+E ++LAKTG VEFL E Y H L++L E + FK
Sbjct: 63 D--IEISYSITGVFLEQALEFNEEVVELFRDLAKTGNVEFLGETYHHSLSSLFEEHEEFK 120
Query: 122 AEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPHY 181
++ IK+ F Y RN+ LI++++I +M F GM TEGA +L W+SP+Y
Sbjct: 121 EDILEHKNLIKDLFGYKTTTFRNTELIFNNKIAETIKDMGFNGMFTEGANRILDWRSPNY 180
Query: 182 LYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIFM 241
+Y L ++LR+ LSDDI RF++ W+ YPL AD Y +++ P + ++M
Sbjct: 181 VYSSLCG--LNVLLRNYNLSDDIGFRFSSRNWKEYPLMADKYAKWVSNTPGD--CINLYM 236
Query: 242 NLTALGIEQPLHSNILEFFKALP-ECARHRGISFSTPTEVCERAKSVGELSV--PYPLSW 298
+ G Q + I EF + LP E H I ++TP+E+ E K + V LSW
Sbjct: 237 DYETFGEHQWYDTGIFEFLRHLPKELDNHNHIEYATPSEILELCKPKDTIDVFEFSTLSW 296
Query: 299 RDEERDVSTWLGNSMQREAFNKLYSIA---DRVRIANDSRINQD------WDYLQASDNF 349
D ERD+S WLG+ MQ+ +F KL I ++ D + ++ + +Q SDNF
Sbjct: 297 ADSERDISAWLGSKMQQLSFQKLKEIRGYLNQYLQQFDEKERKELIEYKIYKNMQTSDNF 356
Query: 350 SAMSTK---PVPVGVDRGIYSTPFDAFTNYMNILGDF 383
M TK + V +STPFDA+ Y++ DF
Sbjct: 357 YYMCTKGFNDMDVHSYFSHFSTPFDAYAAYLDTYYDF 393
>gi|45358854|ref|NP_988411.1| Glycoside hydrolase, family 57 [Methanococcus maripaludis S2]
gi|45047720|emb|CAF30847.1| Glycoside hydrolase, family 57 [Methanococcus maripaludis S2]
Length = 407
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 131/397 (32%), Positives = 215/397 (54%), Gaps = 23/397 (5%)
Query: 4 ICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYE-NERSITDIVQRSYMPALDTLLQMIKDS 62
+ L FE+HQ LR+ + G Y D E N+ + + Y+P+ +L++I +
Sbjct: 3 LSLNFEVHQPNRLRKSVNLNSGDLWNRYVDVELNKEIFNKVADKCYIPSNMIMLELIDNY 62
Query: 63 NGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAAL-GNEDSFK 121
+ +++ ++GV +E + EV+E ++LAKTG VEFL E Y H L++L + + FK
Sbjct: 63 D--IELSYSITGVFLEQALEFNEEVVELFKDLAKTGNVEFLGETYHHSLSSLFEDHEEFK 120
Query: 122 AEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPHY 181
++ K IKE F Y RN+ LI++++I EM F+G+ TEGA +L W+SP+Y
Sbjct: 121 EDILDHKKLIKELFGYKTTTFRNTELIFNNKIAETIKEMGFRGIFTEGANRILDWRSPNY 180
Query: 182 LYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIFM 241
+Y + L ++ R+ LSDDI RF++ +W+ YPL AD Y + +++ P + ++M
Sbjct: 181 VY--SALSGLNVLFRNYNLSDDIGFRFSSRDWKEYPLMADKYASWLSNTPGD--CINLYM 236
Query: 242 NLTALGIEQPLHSNILEFFKALP-ECARHRGISFSTPTEVCE--RAKSVGELSVPYPLSW 298
+ G Q + I EF + LP E + I +STP+E+ E K ++ LSW
Sbjct: 237 DYETFGEHQWADTGIFEFLRYLPKELENYNHIEYSTPSEILELCTPKDTVDVFEFSTLSW 296
Query: 299 RDEERDVSTWLGNSMQREAFNKLYSI----ADRVRIANDSRINQDWDY-----LQASDNF 349
D ERD+S WLGN MQ+ +F +L I + ++ ++ + +Y +Q SDNF
Sbjct: 297 ADSERDLSAWLGNRMQQLSFQRLKEIRKYLGNYLKRYDEKERKELIEYKIYKNMQTSDNF 356
Query: 350 SAMSTK---PVPVGVDRGIYSTPFDAFTNYMNILGDF 383
M TK + V +STP+DA++ Y++ DF
Sbjct: 357 YYMCTKGFNDMDVHSYFSHFSTPYDAYSAYLDAYYDF 393
>gi|126008144|ref|ZP_01708719.1| hypothetical protein Faci_03001351 [Ferroplasma acidarmanus fer1]
Length = 377
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 129/384 (33%), Positives = 192/384 (50%), Gaps = 22/384 (5%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
M+ I YFE+HQ + LR + D + + +N I + SY+PA L++
Sbjct: 1 MENIAFYFELHQPLRLRPLKIQDRPDKMGIFWEEQNRDIFKRISEISYIPATKLLME--- 57
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
K LSG IE +Y+PE I+ I + K+G E + E Y H LA++ NED F
Sbjct: 58 ---SGIKSTFSLSGTFIEQALKYSPETIDVIDDYVKSGLCELMGETYFHSLASIWNEDEF 114
Query: 121 KAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPH 180
K +V IK F+Y+P RN+ LIY++ I MA +M F+ ++ EG + + SP+
Sbjct: 115 KYQVNEQMHSIKSIFNYSPVSFRNTELIYNNRIAEMARDMGFRNILAEGTEEISRRYSPN 174
Query: 181 YLYHCAIAPQ-LKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGI 239
+ Y ++P + L LR+ +SD+IS RF+N+ W GYPL AD YI I + P + I +
Sbjct: 175 FRY---LSPSGVNLYLRNYPMSDNISFRFSNTAWSGYPLTADKYIQWIQNSPGD--IMNL 229
Query: 240 FMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYPLSWR 299
+M+ G Q + I +F L + G+ E+ + +S+ +SW
Sbjct: 230 YMDYETFGEHQRKETGIFDFVHYLGKYIEQYGMETLKIDEIQAKFSVKDTVSIDKTISWA 289
Query: 300 DEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMST-KPVP 358
D RD+S WLGN MQ EAF++L D D ++ W YLQ SD MS +P
Sbjct: 290 DTRRDLSAWLGNKMQNEAFSRLKHCED----CPDKKL---WRYLQTSDLIYYMSMGEPED 342
Query: 359 VGVDR--GIYSTPFDAFTNYMNIL 380
V Y +P+ AF YM L
Sbjct: 343 FTVHEYFNPYRSPYLAFIYYMYAL 366
>gi|88602129|ref|YP_502307.1| Alpha-amylase [Methanospirillum hungatei JF-1]
gi|88187591|gb|ABD40588.1| Alpha-amylase [Methanospirillum hungatei JF-1]
Length = 484
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 123/390 (31%), Positives = 196/390 (50%), Gaps = 24/390 (6%)
Query: 5 CLYFEIHQIIHLRR--YRFFDIGTD---HYYYDDYENERSITDIVQRSYMPALDTLLQMI 59
C+ FE+HQ L++ F G D Y+DD N+ + + + Y PA +L +
Sbjct: 6 CIGFEVHQPYRLKKGFKPDFADGPDDPMERYFDD-ANKEILLRVCDKCYEPATSIILDQL 64
Query: 60 KDSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAAL-GNED 118
D F A LSGV IE +E++AP+V++ ++ A+ VE + + Y H +++L D
Sbjct: 65 DDG---FCCAFSLSGVLIEQMEKWAPDVLDLFRQAAQHKNVEMIGQTYFHSISSLFWTMD 121
Query: 119 SFKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKS 178
F +V +K+ F TP+V N+ ++ + I ++ FK TEG ++L W+S
Sbjct: 122 EFCNQVNLHRDLLKDVFGVTPQVFENTEFLFDNRIAATVKDLGFKACFTEGVDYILEWRS 181
Query: 179 PHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYG 238
P+YLY CA P +I+R+ LSDDI+ RF +WE +PL AD Y N ++ P +
Sbjct: 182 PNYLYQCAGLP---VIMRNFKLSDDIAFRFTCRDWEAWPLTADRYANWVSRTPGD--FVP 236
Query: 239 IFMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYPLSW 298
+F++ +G + S I EFF+ L R + P+++ E S+P P+SW
Sbjct: 237 VFIDYETIGEHYWVESGIHEFFRHLGPEMRRSEVQMVKPSDLLSFPVH-DEFSIPLPISW 295
Query: 299 RDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPVP 358
D E+D + W+ N Q+ AF + R + + W +Q SD+F MS K
Sbjct: 296 ADAEKDGTAWIENRKQKNAFRSVQ------RAESFCKDKHTWRCMQISDHFYYMSCKHGS 349
Query: 359 VGVDRGIYS--TPFDAFTNYMNILGDFISR 386
G +S +AF YM++L DFI R
Sbjct: 350 CGEVHTYFSHQPEHEAFITYMDVLADFIER 379
>gi|147920292|ref|YP_685938.1| putative alpha-amylase [uncultured methanogenic archaeon RC-I]
gi|110621334|emb|CAJ36612.1| putative alpha-amylase [uncultured methanogenic archaeon RC-I]
Length = 501
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 122/392 (31%), Positives = 206/392 (52%), Gaps = 25/392 (6%)
Query: 1 MKTICLYFEIHQIIHLRR-YRFFDIG---TDHYYYDDYENERSITDIVQRSYMPALDTLL 56
M +C+ FE+HQ L +R + G + Y+ N + + ++ Y PA +L
Sbjct: 1 MTRLCIGFEVHQPYRLNSGFRPGNYGGKSPEEAYFSGI-NREILERVCRKCYNPATALVL 59
Query: 57 QMIKDSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGN 116
+++ FK A LSG +E LE++ P+ + +E+A+ E L + Y H +A+L +
Sbjct: 60 ELLDQG---FKCAFSLSGTLVEQLEKWEPDTLGLFEEVARHRNAEMLCQTYYHSVASLFD 116
Query: 117 EDS-FKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLG 175
+ S F+ +V+ + +++ F TP V+ N+ ++++ I A + FK + +EG + +LG
Sbjct: 117 DPSEFEEQVRLHRQLMRDAFGVTPAVMENTEFLFNNAIAESAKRLGFKAIYSEGVERLLG 176
Query: 176 WKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQ 235
W+SP+Y+Y C + L+LR+ LSDDI+ RF N +W +PL AD Y + +A+ P +
Sbjct: 177 WRSPNYVYSCR---GINLLLRNYQLSDDIAFRFTNRQWPEWPLTADKYASWLAATPGD-- 231
Query: 236 IYGIFMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYP 295
+F++ G Q + I EF + LP + RG+ F P+E+ + L+V
Sbjct: 232 YVNVFIDYETFGEHQWEDTGIFEFLRWLPRECKARGVEFWKPSEIAS-LPAAEALNVEET 290
Query: 296 LSWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTK 355
+SW D E+D+S WLGN+MQ A + + A+D + W LQ SD+F M++K
Sbjct: 291 VSWADVEKDISAWLGNTMQHMAIKE---VQRGEAFASDKKT---WRLLQTSDHFYYMASK 344
Query: 356 PVPVGVDRGIYS----TPFDAFTNYMNILGDF 383
G +S T +AF YM +L DF
Sbjct: 345 FGSCGDVHSYFSPEACTNIEAFDMYMRVLSDF 376
>gi|126466279|ref|YP_001041388.1| glycoside hydrolase, family 57 [Staphylothermus marinus F1]
gi|126015102|gb|ABN70480.1| glycoside hydrolase, family 57 [Staphylothermus marinus F1]
Length = 516
Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats.
Identities = 126/376 (33%), Positives = 199/376 (52%), Gaps = 25/376 (6%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDI------------GTDHYYYDDYENERSITDIVQRSY 48
M I FE+HQ L R + + + +D+ N+ I + Y
Sbjct: 1 MSDIVFMFEVHQPYRLDRNAYNKLLEKALRGRLEPHDLEDAIFDNGLNKLVIERASTKCY 60
Query: 49 MPALDTLLQMIK---DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAE 105
+PA +L+ IK +SN FKVA +SGV IE + + PEVI+ EL +TG VEF+ +
Sbjct: 61 IPATKIILENIKRYANSNKPFKVAYSISGVFIEQVRMWKPEVIDLFMELRETGMVEFVEQ 120
Query: 106 PYSHGLAA---LGNEDSFKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKF 162
Y H +AA L + + ++ + +KE FDY PK + N+ Y+++I + + M +
Sbjct: 121 TYYHSMAAFMPLKDWSELREQILEHRRAMKELFDYEPKSIENTEFSYNNDIAWLFSSMGY 180
Query: 163 KGMITEGAKHVLGWKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADD 222
K ++TEG VLGW+SP+Y+Y A +K++ R+ LSDDI RF++ W+ YPL AD
Sbjct: 181 KVVLTEGVDWVLGWRSPNYVYR-AYGSDIKVLTRNYRLSDDIGYRFSDRNWDQYPLTADK 239
Query: 223 YINKIASQPDEEQIYGIFMNLTALGIEQPLHSNILEFFKALP-ECARHRGISFSTPTEVC 281
Y + +A+ P + + + M+ G + I EF + LP E ++ + STP+EV
Sbjct: 240 YASWLAATPGD--VIFLAMDYETFGEHHWPETGIHEFLRWLPGEILKYNHLYTSTPSEVV 297
Query: 282 ERAKSVGELSVP--YPLSWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQD 339
++ + + VP +SW D ERD+S WLGN MQR AF L + V+ ++ I +
Sbjct: 298 DKYPARDIIDVPPWNTISWAD-ERDLSAWLGNHMQRNAFKILVDLRPYVKALDEPEITRI 356
Query: 340 WDYLQASDNFSAMSTK 355
W L SD+ ++TK
Sbjct: 357 WKLLTISDHLYYIATK 372
>gi|126459652|ref|YP_001055930.1| Alpha-amylase [Pyrobaculum calidifontis JCM 11548]
gi|126249373|gb|ABO08464.1| Alpha-amylase [Pyrobaculum calidifontis JCM 11548]
Length = 457
Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 126/386 (32%), Positives = 202/386 (52%), Gaps = 16/386 (4%)
Query: 4 ICLYFEIHQIIHLR---RYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
+ L+FE+HQ +R R F ++H + D N +V++ Y PA +L+ +
Sbjct: 3 VVLFFEVHQPRRIRPDLRRVFPRTPSEHEVFYDELNASIFKRVVEKVYRPATRIILEAAR 62
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDSF 120
+ G F+V +SG+ +E + ++AP+V+ QELA G EF+A+ Y H LA + + F
Sbjct: 63 EVPG-FRVTFSVSGLALEQMRKWAPDVLSMFQELAALGS-EFVAQTYYHSLAWFIDREEF 120
Query: 121 KAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSPH 180
+ +V+ +K ++E Y P+ N+ IY++++ EM F ++TEG + VLGW+SP+
Sbjct: 121 REQVEEHAKAVEELVGYRPRAAENTEFIYNNDVACALWEMGFSTVVTEGVEWVLGWRSPN 180
Query: 181 YLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGIF 240
Y+Y A +++ R+ LSDDI RF W+ +PL AD Y + + P + + I
Sbjct: 181 YVYK-AWGCDARVLTRNYRLSDDIGFRFGARWWDQWPLTADKYAAWLEATPGD--VVLIA 237
Query: 241 MNLTALGIEQPLHSNILEFFKALP-ECARHRGISFSTPTEVCERAKSVGELSVP--YPLS 297
++ G S I EF K LP E A+ +SF+T +E +R VP +S
Sbjct: 238 VDYETFGEHHWPESGIHEFLKWLPREVAKRPRLSFATVSEAAQRYPPRDVYDVPPWSTIS 297
Query: 298 WRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKPV 357
W D ERD+S WLGN +QREAF+ L + + A + + W L SD+F +TK
Sbjct: 298 WAD-ERDLSAWLGNELQREAFSLLAWLYPYAK-ALGGDVLRLWRLLSTSDHFYYQATKMG 355
Query: 358 PVGVDRGIYS---TPFDAFTNYMNIL 380
P G +S + + A YM+ L
Sbjct: 356 PAGEVHSYFSPYGSAYKAHDVYMSAL 381
>gi|41033621|emb|CAF18477.1| alpha-amylase [Thermoproteus tenax]
Length = 493
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 127/394 (32%), Positives = 200/394 (50%), Gaps = 18/394 (4%)
Query: 4 ICLYFEIHQIIHLRR--YRFF--DIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMI 59
I L+FE+HQ LR +R F + + +Y ++++ + + +R Y A +L+
Sbjct: 40 IVLFFEVHQPYRLRPDLHRVFPREPSFEELFYSEFDSA-VFSRVAERVYRKATKIILEAS 98
Query: 60 KDSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDS 119
++ KV +SG+ +E + R+AP+V+E ++ELA G EF+A+ Y H LA L +
Sbjct: 99 REVP--LKVTFSVSGLALEQIRRWAPDVLELLRELAARGVAEFVAQTYYHSLAWLIDLRE 156
Query: 120 FKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSP 179
FK +V K ++E Y P N+ IY++++ AEM FK + TEG VLGW+SP
Sbjct: 157 FKEQVALQIKAVEELIGYRPTAAENTEFIYNNDVACAFAEMGFKAVATEGVDWVLGWRSP 216
Query: 180 HYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGI 239
+Y+Y + ++++ R+ LSDD+ RF W+ +PL AD Y + + P + + I
Sbjct: 217 NYVYR-SWGCDVRVLTRNYRLSDDVGFRFGARWWDQWPLTADKYAAWLDATPGD--VVLI 273
Query: 240 FMNLTALGIEQPLHSNILEFFKALP-ECARHRGISFSTPTEVCERAKSVGELSVP--YPL 296
++ G S I EF + LP E ++ + F+T TE R VP +
Sbjct: 274 AVDYETFGEHHWPESGIHEFLRWLPREVSKRPRLKFATLTEAALRNPPRDVYDVPPWATI 333
Query: 297 SWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKP 356
SW D ERD+S WLGN MQR AF+ L + R + W L SD+F +TK
Sbjct: 334 SWAD-ERDLSAWLGNEMQRNAFSVLRWLYPYARALGGDALRL-WRLLSTSDHFYYQATKS 391
Query: 357 VPVGVDRGIYS---TPFDAFTNYMNILGDFISRV 387
P G +S + + A YMN L +S +
Sbjct: 392 GPAGEVHSYFSPYGSAYKAHDIYMNALAVLLSVI 425
>gi|126353038|ref|ZP_01710049.1| Alpha-amylase [Caldivirga maquilingensis IC-167]
gi|126311692|gb|EAZ64146.1| Alpha-amylase [Caldivirga maquilingensis IC-167]
Length = 448
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 127/382 (33%), Positives = 191/382 (50%), Gaps = 17/382 (4%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERS--ITDIVQRSYMPALDTLLQM 58
+K I + E+HQ L R + + + ++ I RSY LD +
Sbjct: 2 VKNIVFFMEMHQPRRLNRLLHYQSSMEPLDLLFDDELDKLILSRIAARSYSKVLD----I 57
Query: 59 IKDSN---GYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALG 115
IK++N GY + A+ ++GV +E L ++APEV+ K+ L E +AE Y H LA L
Sbjct: 58 IKEANREYGY-RFAISITGVLVEQLRKWAPEVLGKLINLINDDAAEPVAETYYHSLAYLI 116
Query: 116 NEDSFKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLG 175
+E F+ +V I++ P ++N+ +YSD++GR+ +EM FK +TEG + VLG
Sbjct: 117 DEAEFREQVMMHVNLIEKLTGKRPVTVQNTEFMYSDDVGRVFSEMGFKVALTEGVERVLG 176
Query: 176 WKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQ 235
++ P YLY L LR LSDD+ RF N W+ YPL AD Y+ + + +
Sbjct: 177 FRQPTYLYKSPSGLLLL--LRHYRLSDDVGFRFTNKSWDQYPLTADKYVAWLRATWGDLV 234
Query: 236 IYGIFMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYP 295
+ G +++ G P S I EF + + A GI F P+EV S EL+V
Sbjct: 235 MIG--LDMETFGEHMPEESGIFEFLRWMFRHAYESGIRFIAPSEVKGYVSSSYELNVNEV 292
Query: 296 LSWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTK 355
+SW D E+D S W+GN MQ +FN++ + V+ D + L SD+F MSTK
Sbjct: 293 ISWADAEKDTSAWIGNEMQWTSFNQVAMLHGLVKELGDEYLRNYVRLLMVSDHFYYMSTK 352
Query: 356 ---PVPVGVDRGIYSTPFDAFT 374
P V Y +P+ AFT
Sbjct: 353 HGAPQDVHNYFNPYYSPYRAFT 374
>gi|16082514|ref|NP_393818.1| Alpha-amylase [Thermoplasma acidophilum DSM 1728]
Length = 380
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 115/355 (32%), Positives = 174/355 (49%), Gaps = 21/355 (5%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDI--GTDHYYYDDYENERSITDIVQRSYMPALDTLLQM 58
MK + YFE+HQ LR D+ G+ ++++ +NE I +Y+PA +L+
Sbjct: 1 MKDVIFYFELHQPFRLRPVNLSDLKNGSRDVFWEE-KNEEIFKRIAANNYIPATQSLMDY 59
Query: 59 IKDSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNED 118
+ + LSG +E +Y P+VI+ I + ++G E L+E Y H LA++ N++
Sbjct: 60 ------GIRSSFSLSGTFMEQASKYCPKVIDVIDDYVRSGQCELLSETYYHSLASIWNDE 113
Query: 119 SFKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKS 178
F +V+ IK+ F+Y P RN+ LIY+D I +A M F+ ++ EG +
Sbjct: 114 EFVRQVRMQESAIKKTFNYEPVSFRNTELIYNDHIAEVAKGMGFRNILAEGTDDIASRYD 173
Query: 179 PHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYG 238
+Y Y A + L LR+ LSDDIS RF+N W YPL AD + I++ E I
Sbjct: 174 VNYRY--AAPSGINLYLRNYPLSDDISFRFSNRAWADYPLTADKFARWISASSGE--IVN 229
Query: 239 IFMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYPLSW 298
+FM+ G Q + I EF + LP + E R ++ +SV SW
Sbjct: 230 LFMDYETFGEHQRPETGIFEFLRYLPMYFEENDVHTILVREAEARHRTRDFISVSKTTSW 289
Query: 299 RDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMS 353
D+ RD+S W+GN MQ FN++ D +I W YLQ SD MS
Sbjct: 290 ADKNRDLSAWMGNLMQINTFNRIRDCKD--------KIGDLWGYLQTSDIIYYMS 336
>gi|15921052|ref|NP_376721.1| hypothetical protein ST0817 [Sulfolobus tokodaii str. 7]
gi|15621836|dbj|BAB65830.1| 443aa long conserved hypothetical protein [Sulfolobus tokodaii str.
7]
Length = 443
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 123/386 (31%), Positives = 199/386 (51%), Gaps = 17/386 (4%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDI----GTDHYYYDDYENERSITDIVQRSYMPALDTLL 56
M+ + + FE+HQ +RR F+D G Y+DD N + + Y+PA LL
Sbjct: 1 MRRLIIGFEVHQPFRIRRNYFWDPVIRGGPLTKYFDDNLNREIFERVKNKCYIPATRILL 60
Query: 57 QMIK--DSNGY-FKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAA 113
+ I+ +S GY FK LSG IE E++ +V+E Q+L+ T VEFL++ Y H + +
Sbjct: 61 EEIENGESEGYDFKFFFSLSGTFIEQAEKWGKDVLELFQQLSYTHKVEFLSQTYYHSITS 120
Query: 114 LGNE-DSFKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKH 172
L + +K +V+ I++YF P N+ L+ + I + ++ FK +ITEG +
Sbjct: 121 LWEDLTEWKEQVQMHKNLIRDYFGQEPVTFENTELLLTPRIVKEIEKLGFKVVITEGKES 180
Query: 173 VLGWKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPD 232
+L KSP+ +Y +L L+LR+ LSDDI+ RF+N +W+ YPL A + + ++
Sbjct: 181 LLKGKSPNRVYRIR-DTKLSLLLRNYRLSDDIAFRFSNPKWDQYPLTASKFADWVSWS-- 237
Query: 233 EEQIYGIFMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSV 292
E +I IF++ G S IL+F + LP RG+ F P EV + + E+ +
Sbjct: 238 EGEIGLIFVDYETFGEHHWPESGILDFLRWLPRELHRRGVEFKLPREVYK--EYYDEIVI 295
Query: 293 PYPLSWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAM 352
+SW D +D S+WLGN MQ A++++ + + + W Y SD++ M
Sbjct: 296 DSTVSWADINKDESSWLGNIMQW-AYDEMVRRTEMLAKEAGGEYLKAWRYFTTSDHYYYM 354
Query: 353 ---STKPVPVGVDRGIYSTPFDAFTN 375
S P V +++P DAF N
Sbjct: 355 FLGSGGPAEVHSYFSSFNSPIDAFIN 380
>gi|15897865|ref|NP_342470.1| Alpha amylase [Sulfolobus solfataricus P2]
gi|13814172|gb|AAK41260.1| Alpha amylase [Sulfolobus solfataricus P2]
Length = 447
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 135/450 (30%), Positives = 210/450 (46%), Gaps = 22/450 (4%)
Query: 1 MKTICLYFEIHQIIHLRRYRF----FDIGTDHYYYDDYENERSITDIVQRSYMPALDTLL 56
MK + + FE+HQ +RR F F + ++D N+ I + Y+PA + +L
Sbjct: 1 MKRVIVGFEVHQPFRIRRDFFWNPRFRQKLEDRFFDTERNKEIFERIKKNCYIPATNIIL 60
Query: 57 QMIK---DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAA 113
I+ + K +SG +E ER+ EVIE Q+LA T VEFLA+ Y H + +
Sbjct: 61 SSIERAEEEGNNVKYFFSISGTFLEQAERWGREVIELFQQLAYTHKVEFLAQTYYHSVTS 120
Query: 114 LGNEDS-FKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKH 172
L + S +K +VK IK YF P N+ LI +I +M FK M++EG
Sbjct: 121 LWEDKSEWKEQVKMHKDTIKSYFGQYPTTFENTELITKKDIVEEVEKMGFKMMLSEGTNR 180
Query: 173 VLGWKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPD 232
L +SP+Y+Y +++++ R+ TLSDDI+ RF+N W+ YPL A Y + I+
Sbjct: 181 NLNGRSPNYVYKLK-GHEIRMLFRNYTLSDDIAFRFSNPNWDQYPLTASKYADWISRS-- 237
Query: 233 EEQIYGIFMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSV 292
E + IF++ G + ILEF K LP +G+ P EV E+ +
Sbjct: 238 EGNVGLIFVDYETFGEHHREQTGILEFLKWLPIELNSKGVEMMMPKEVYNDVYD--EIEI 295
Query: 293 PYPLSWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAM 352
+ SW D E+D +WLGN MQ A++ A+ + + W Y SDN+ +
Sbjct: 296 AHTTSWADIEKDEKSWLGNIMQW-AYDDAVRRAEMPSRELGNEYLRVWRYFTTSDNYYYL 354
Query: 353 ---STKPVPVGVDRGIYSTPFDAFTNYMNILGDFISRVDALYPADIDNEELNALLTAIRN 409
P V + +P DAF N + FI + + +I NE +L +
Sbjct: 355 YLGHGSPAEVHSYFNAFGSPIDAFINEFYAISTFIH--EEISKLNIKNEPYIFILG---D 409
Query: 410 QASEIETKEKEKVLLKAKAEKLANENDKLR 439
+ + I EKE + + + E+ LR
Sbjct: 410 KRASIAWNEKEFMEIVMRDERFKTHLKNLR 439
>gi|18314057|ref|NP_560724.1| hypothetical protein PAE3428 [Pyrobaculum aerophilum str. IM2]
gi|18161638|gb|AAL64906.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 457
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 115/364 (31%), Positives = 183/364 (50%), Gaps = 14/364 (3%)
Query: 4 ICLYFEIHQIIHLRR--YRFFD--IGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMI 59
+ +FE+HQ LR YR F G +YD+ NE + +R Y A +L +
Sbjct: 3 VVFFFEVHQPRRLRPDLYRVFPRRPGDLDVFYDEL-NEHIFRRVAERVYRKATRIILDVA 61
Query: 60 KDSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDS 119
++ G +V +SG+ +E ++AP+V+E +EL EF+A+ Y H LA ++
Sbjct: 62 REVPG-LRVTYSVSGLALEQFRKWAPDVLELFRELVAREVAEFVAQTYYHSLAWFVDKGE 120
Query: 120 FKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSP 179
F+ +V+ +K ++E Y + N+ IY++++ + F ++TEG VLGW+SP
Sbjct: 121 FREQVEMQAKAVEELIGYKARAAENTEFIYNNDVACYLYSLGFSTVVTEGVDWVLGWRSP 180
Query: 180 HYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGI 239
+Y+Y A K+++R+ LSDDI RF W+ +PL AD Y + + P + + I
Sbjct: 181 NYVYK-AWGCDAKVLVRNYRLSDDIGFRFGARWWDQWPLTADKYATWLEATPGD--VVLI 237
Query: 240 FMNLTALGIEQPLHSNILEFFKALP-ECARHRGISFSTPTEVCERAKSVGELSVP--YPL 296
++ G S I +F K LP E A+ +SF+T +E + VP +
Sbjct: 238 AVDYETFGEHHWPESGIYDFLKWLPREIAKRPRLSFATVSEAASKHAPRDIYDVPPWATI 297
Query: 297 SWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKP 356
SW D ERD+S WLGN +QR AF L + R + + W L SD+F +TK
Sbjct: 298 SWAD-ERDLSAWLGNELQRNAFTLLKWLYPYARAVGEEALRL-WRELSTSDHFYYQATKS 355
Query: 357 VPVG 360
P G
Sbjct: 356 GPAG 359
>gi|70606970|ref|YP_255840.1| alpha-amylase [Sulfolobus acidocaldarius DSM 639]
gi|68567618|gb|AAY80547.1| alpha-amylase [Sulfolobus acidocaldarius DSM 639]
Length = 444
Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 135/440 (30%), Positives = 218/440 (49%), Gaps = 21/440 (4%)
Query: 1 MKTICLYFEIHQIIHLRRYRF----FDIGTDHYYYDDYENERSITDIVQRSYMPALDTLL 56
M+ + L FE+HQ ++ F F Y+D+ N Q+ Y+PA +L
Sbjct: 1 MRNVILGFEVHQPFRIKGSYFWNPQFRDNPIEKYFDNQLNRDVFLRAKQKCYIPATKIIL 60
Query: 57 QMIK--DSNGY-FKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAA 113
I+ ++ GY KV +SG +E E++ EVI+ +Q+L+ T VEFL++ Y H +
Sbjct: 61 DEIERGENEGYDVKVFYSISGTFMEQAEKWGREVIDLLQQLSYTRKVEFLSQTYYHSITG 120
Query: 114 LGNE-DSFKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKH 172
L ++ D +K +VK+ S+ IKEYFD TP N+ L+ + I + + FK +I EG +
Sbjct: 121 LWDDLDEWKEQVKQHSELIKEYFDQTPTTFENTELLVTPRILKEVENLGFKSIIMEGKES 180
Query: 173 VLGWKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPD 232
VL +SP+Y+Y + +L +LR+ LSDDI+ RF+N W+ YPL A + +
Sbjct: 181 VLNGRSPNYVYRIKNS-KLVGLLRNYRLSDDIAFRFSNRNWDQYPLTAQKLSDWVLWS-- 237
Query: 233 EEQIYGIFMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSV 292
E + IF++ G S IL+F + LP R I P EV +RA V E+ +
Sbjct: 238 EGDVGLIFVDYETFGEHHWPESGILDFLRWLPRELSRREIKMKLPKEVYDRA--VQEIEI 295
Query: 293 PYPLSWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAM 352
SW D +D S+WLGN MQ A++++ + + + W Y SD++ +
Sbjct: 296 TQTSSWADINKDESSWLGNIMQW-AYDEMVRRTEMLAKELGKEYLKAWKYFTTSDHYYYL 354
Query: 353 ---STKPVPVGVDRGIYSTPFDAFTNYMNILGDFISRVDALYPADIDNEELNALLTAIRN 409
S+ P V +++P DAF N + + F + I+NE +
Sbjct: 355 FLGSSSPAEVHSYFSSFNSPIDAFINEIYAISMFQEEMRK--KLKIENEPF--IFYKGLK 410
Query: 410 QASEIETKEKEKVLLKAKAE 429
+ E+ T ++ K L+K K E
Sbjct: 411 RGKEVWTIDQYKELIKQKPE 430
>gi|119872481|ref|YP_930488.1| Alpha-amylase [Pyrobaculum islandicum DSM 4184]
gi|119673889|gb|ABL88145.1| Alpha-amylase [Pyrobaculum islandicum DSM 4184]
Length = 457
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 121/390 (31%), Positives = 193/390 (49%), Gaps = 23/390 (5%)
Query: 4 ICLYFEIHQIIHLRR--YRFF-----DIGTDHYYYDDYENERSITDIVQRSYMPALDTLL 56
+ L+FE+HQ +R YR + DI +YD+ N + +V+R Y A +
Sbjct: 3 VVLFFEVHQPRRIRPDIYRIYPRKPSDI---EIFYDEL-NMSILKRVVERVYRKATKIIY 58
Query: 57 QMIKDSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGN 116
+ ++ G FKV LSG+ +E R+AP+V+E +EL EF+A+ Y H L +
Sbjct: 59 EAALETPG-FKVTFSLSGLALEQFRRHAPDVLELFRELVSHEAAEFIAQTYYHSLVWFID 117
Query: 117 EDSFKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGW 176
+ F+ +++ +K ++E P+ N+ IY+++I M F+ ++TEG VLGW
Sbjct: 118 REEFREQIELQAKTVEELVGIRPRAAENTEFIYNNDIACFLYSMGFETVVTEGVDWVLGW 177
Query: 177 KSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQI 236
+SP+Y+Y A +++++R+ LSDDI RF W+ +PL AD Y + + P + +
Sbjct: 178 RSPNYVYK-AWGCDVRVLVRNYRLSDDIGFRFGARWWDQWPLTADKYATWLEATPGD--V 234
Query: 237 YGIFMNLTALGIEQPLHSNILEFFKALP-ECARHRGISFSTPTEVCERAKSVGELSVP-- 293
I ++ G S I EF + LP E A+ + F+T +E R VP
Sbjct: 235 VFIAVDYETFGEHHWPESGIYEFLRWLPREIAKRPRLRFATVSEAASRHPPRDVYDVPPW 294
Query: 294 YPLSWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMS 353
+SW D ERD+S WLGN +QR AF L + + + W L SD+F +
Sbjct: 295 ATISWAD-ERDLSAWLGNEIQRNAFALLAWLYPYAKALGGETLRL-WRELSTSDHFYYQA 352
Query: 354 TKPVPVGVDRGIYS---TPFDAFTNYMNIL 380
TK P G +S + + A YM L
Sbjct: 353 TKTGPAGEVHSYFSPYGSAYKAHDVYMAAL 382
>gi|10639511|emb|CAC11483.1| alpha-amylase related protein [Thermoplasma acidophilum]
Length = 357
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 104/319 (32%), Positives = 155/319 (48%), Gaps = 18/319 (5%)
Query: 35 ENERSITDIVQRSYMPALDTLLQMIKDSNGYFKVALCLSGVGIESLERYAPEVIEKIQEL 94
+NE I +Y+PA +L+ + + LSG +E +Y P+VI+ I +
Sbjct: 13 KNEEIFKRIAANNYIPATQSLMDY------GIRSSFSLSGTFMEQASKYCPKVIDVIDDY 66
Query: 95 AKTGCVEFLAEPYSHGLAALGNEDSFKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIG 154
++G E L+E Y H LA++ N++ F +V+ IK+ F+Y P RN+ LIY+D I
Sbjct: 67 VRSGQCELLSETYYHSLASIWNDEEFVRQVRMQESAIKKTFNYEPVSFRNTELIYNDHIA 126
Query: 155 RMAAEMKFKGMITEGAKHVLGWKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWE 214
+A M F+ ++ EG + +Y Y A + L LR+ LSDDIS RF+N W
Sbjct: 127 EVAKGMGFRNILAEGTDDIASRYDVNYRY--AAPSGINLYLRNYPLSDDISFRFSNRAWA 184
Query: 215 GYPLFADDYINKIASQPDEEQIYGIFMNLTALGIEQPLHSNILEFFKALPECARHRGISF 274
YPL AD + I++ E I +FM+ G Q + I EF + LP +
Sbjct: 185 DYPLTADKFARWISASSGE--IVNLFMDYETFGEHQRPETGIFEFLRYLPMYFEENDVHT 242
Query: 275 STPTEVCERAKSVGELSVPYPLSWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDS 334
E R ++ +SV SW D+ RD+S W+GN MQ FN++ D
Sbjct: 243 ILVREAEARHRTRDFISVSKTTSWADKNRDLSAWMGNLMQINTFNRIRDCKD-------- 294
Query: 335 RINQDWDYLQASDNFSAMS 353
+I W YLQ SD MS
Sbjct: 295 KIGDLWGYLQTSDIIYYMS 313
>gi|145592080|ref|YP_001154082.1| Alpha-amylase [Pyrobaculum arsenaticum DSM 13514]
gi|145283848|gb|ABP51430.1| Alpha-amylase [Pyrobaculum arsenaticum DSM 13514]
Length = 456
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 115/388 (29%), Positives = 189/388 (48%), Gaps = 17/388 (4%)
Query: 4 ICLYFEIHQIIHLRR--YRFFDIG--TDHYYYDDYENERSITDIVQRSYMPALDTLLQMI 59
+ L+FE+HQ LR YR F +Y++ + + +R Y + LL
Sbjct: 3 VVLFFEVHQPRRLRPDLYRVFPSKPLEGEIFYEELD-RHVFERVSERVYRKSTKILLDAA 61
Query: 60 KDSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGNEDS 119
++ G +V +SG+ +E + R+AP+V++ +E+A EF A+ Y H LA + +
Sbjct: 62 REVPG-LRVTFSVSGLALEQMRRWAPDVLDLFREMAAREVAEFAAQTYYHSLAWFVDREE 120
Query: 120 FKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSP 179
F+ +V+ K ++E Y P+ N+ IY++++ M F ++TEG VLGW+SP
Sbjct: 121 FREQVEMQVKAVEELIGYKPRAAENTEFIYNNDVACFLHSMGFSTVVTEGVDWVLGWRSP 180
Query: 180 HYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGI 239
+Y+Y A ++++R+ LSDD+ RF W+ +PL AD Y + + P + + I
Sbjct: 181 NYVYK-AWGCDARVLVRNYRLSDDVGFRFGARWWDQWPLTADKYAAWLEATPGD--VVLI 237
Query: 240 FMNLTALGIEQPLHSNILEFFKALP-ECARHRGISFSTPTEVCERAKSVGELSVP--YPL 296
++ G S I EF + LP E A+ + F+T +E VP +
Sbjct: 238 AVDYETFGEHHWPESGIHEFLRWLPREVAKRPRLQFATVSEATRSHTPRDVYDVPPWATI 297
Query: 297 SWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTKP 356
SW D ERD+S WLGN +QR AF+ L + + A + + W L SD+ +TK
Sbjct: 298 SWAD-ERDLSAWLGNELQRNAFSLLSWLYPYAK-ALGGEVLKLWRMLSTSDHLYYQATKM 355
Query: 357 VPVGVDRGIYS---TPFDAFTNYMNILG 381
P G +S + + A YM L
Sbjct: 356 GPAGEVHSYFSPYGSAYKAHDIYMAALA 383
>gi|146304184|ref|YP_001191500.1| Alpha-amylase [Metallosphaera sedula DSM 5348]
gi|145702434|gb|ABP95576.1| Alpha-amylase [Metallosphaera sedula DSM 5348]
Length = 444
Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 117/406 (28%), Positives = 193/406 (47%), Gaps = 19/406 (4%)
Query: 4 ICLYFEIHQIIHLRRYRF----FDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMI 59
+ + FE+HQ +R+ F F Y+DD N + + Y+PA + +L+ I
Sbjct: 5 VIMGFEVHQPFRIRKDAFWNPRFKGSPQERYFDDKLNREIFERVRAKCYIPATNIILEEI 64
Query: 60 K---DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGN 116
+ D K +SG +E ER+ + ++ ++ L+ T VEFLA+ Y H + +L
Sbjct: 65 EAGEDEGREVKFFFSVSGTLLEQAERWGRDFLDLLELLSSTRKVEFLAQTYYHSVTSLWE 124
Query: 117 EDS-FKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLG 175
+ + ++ +VK + +K TP N+ L+ S I A M F G++ EG VL
Sbjct: 125 DRTEWREQVKLHVETVKSLLGQTPVTFENTELLTSPVIVEEAENMGFNGIMMEGKDSVLR 184
Query: 176 WKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQ 235
+SP+++Y ++ ++ R+ TLSDD++ RF+N W+ YPL A+ Y + + + P Q
Sbjct: 185 GRSPNFVYR-RKGGKISILPRNFTLSDDVAFRFSNPNWDQYPLTAEKYSSWVKASPG--Q 241
Query: 236 IYGIFMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYP 295
+ IF++ G S ILEF + LP G+ + P EV +L V
Sbjct: 242 VVTIFVDYETFGEHHWKESGILEFLRWLPRELNREGVEMTLPREV--EGSPYYDLEVSGI 299
Query: 296 LSWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYLQASDNFSAMSTK 355
SW D +D ++WLGN MQ A+++ ++ + W Y SDN+ + T+
Sbjct: 300 SSWADIRKDHTSWLGNIMQW-AYDEAVRRSEMTSKELGGEFLRAWRYFTTSDNYYYLFTE 358
Query: 356 ---PVPVGVDRGIYSTPFDAFTNYMNILGDFISRVDALYPADIDNE 398
P V Y++P DAF N + F+ D L I NE
Sbjct: 359 GGGPGEVHSYFNAYNSPIDAFLNEFYAINSFLH--DELENLGIKNE 402
>gi|21226963|ref|NP_632885.1| Alpha-amylase [Methanosarcina mazei Go1]
gi|20905276|gb|AAM30557.1| Alpha-amylase [Methanosarcina mazei Go1]
Length = 378
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 100/343 (29%), Positives = 165/343 (48%), Gaps = 27/343 (7%)
Query: 46 RSYMPALDTLLQMIKDSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAE 105
R ++ D ++ I+ Y A LSG +E R+ PE++E +ELA++ VEF
Sbjct: 49 REFLRLNDLFIESIERGGSY---AFDLSGPFLEQC-RWDPEMLESFRELAESRRVEFTGS 104
Query: 106 PYSHGLAALGNEDS-FKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKG 164
H L+AL + S F+ EV + +KE +P+ N+ L+Y+ G + EM FK
Sbjct: 105 CNYHSLSALYPDLSWFREEVTIYREMMKELLGVSPETFVNTELLYTQRAGDILGEMGFKC 164
Query: 165 MITEGAKHVLGWKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYI 224
+I EG++++L P ++ QL ++LR + LS+D+ LRF+ WEGYPL D +
Sbjct: 165 LIAEGSRNILDGYDPVRVFE----SQLPILLRHINLSEDLELRFSEKSWEGYPLIPDKFA 220
Query: 225 NKIASQPDEEQIYGIFMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERA 284
+ IA E + +++N T+L + S I +F +A PE + RGI TP+E R
Sbjct: 221 DWIAGI--EGDVLTLYLNNTSLCLHHRNKSMIADFIRAFPEALKSRGIEMITPSEAVSR- 277
Query: 285 KSVGELSVPYPLSWRDEERDVSTWLGNSMQREAFNKLYSIADRVR----IANDSRINQDW 340
L +P + + + +GN Q+ +L + + + N R+ Q +
Sbjct: 278 --FSPLRLPTLGTEQTIRYGMHNAVGNHAQQLYLRELVRVGEELSEIKGKKNYGRLKQIF 335
Query: 341 DYLQASDNFSAMSTKPVPVGVDRGIYSTPFDAFTNYMNILGDF 383
YLQ S+ +M G +R + NY +IL D
Sbjct: 336 GYLQQSEILFSMGPGNSREGHERAV---------NYYSILSDL 369
>gi|73668083|ref|YP_304098.1| alpha-amylase [Methanosarcina barkeri str. Fusaro]
gi|72395245|gb|AAZ69518.1| alpha-amylase [Methanosarcina barkeri str. Fusaro]
Length = 378
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 106/392 (27%), Positives = 188/392 (47%), Gaps = 32/392 (8%)
Query: 1 MKTICLYFEIHQIIHLRRY----RFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLL 56
MK +C+ +H + Y FF + Y+D N S R ++ D ++
Sbjct: 1 MKAVCICMGVHLPYSPKWYWPVEGFFGVPEMDRYFDR-NNIFSKFIKTSRQFLRLNDLIM 59
Query: 57 QMIKDSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAALGN 116
+ I+ Y + LSG + R+ PE++E +E + G VEF H L++L
Sbjct: 60 ESIERGGKY---SFDLSGPFLGQC-RWDPELLESFREFGENGNVEFTGSCRYHSLSSLYP 115
Query: 117 EDS-FKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLG 175
+ S FK EV + ++E D TPK N+ L+Y++ + ++ ++ F +I+EG++++L
Sbjct: 116 DLSWFKEEVLIYREMLRELLDITPKTFVNTELLYTERVEKILTDLGFNCLISEGSRNLLN 175
Query: 176 WKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQ 235
P +++ L +LR + LS+D+ LRF+ W+GYPL + + + IAS E
Sbjct: 176 GYDPVHVFE----NHLPTLLRHINLSEDLELRFSEKNWQGYPLIPEKFADWIASM--EGD 229
Query: 236 IYGIFMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYP 295
I ++ N T+L S I +F + LPE + RGI TP+E R + L +P
Sbjct: 230 ILTLYFNYTSLCFHYRNKSMIDDFIRMLPEALKSRGIDMLTPSEAVRRFEP---LKLPTL 286
Query: 296 LSWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSR----INQDWDYLQASDNFSA 351
+ + ++ LGN Q+ +L I + + +++ + + YLQ S+ F +
Sbjct: 287 GTEQTIRYGMNNALGNHAQQLYLRELVRIEEELSELKENKNYRELKHIFGYLQQSEIFFS 346
Query: 352 MSTKPVPVGVDRGIYSTPFDAFTNYMNILGDF 383
M++ + G +R + NY +IL DF
Sbjct: 347 MNSGNLREGYERAV---------NYFSILSDF 369
>gi|20092846|ref|NP_618921.1| alpha-amylase [Methanosarcina acetivorans C2A]
gi|19918149|gb|AAM07401.1| alpha-amylase [Methanosarcina acetivorans C2A]
Length = 378
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 94/336 (27%), Positives = 163/336 (48%), Gaps = 27/336 (8%)
Query: 53 DTLLQMIKDSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLA 112
D L+ I+ Y A LSG +E R+ PE++E ++ELA++ VEF H L+
Sbjct: 56 DFFLESIEGGGSY---AFDLSGPFLEQC-RWDPELLESMRELAESKKVEFTGSCRYHSLS 111
Query: 113 ALGNEDS-FKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAK 171
AL + S F+ EV + ++E P N+ L+Y++ + + A+M F+ +I EG++
Sbjct: 112 ALYPDLSWFREEVMVYREMLRELLGVNPVTFVNTELLYTERVESILADMGFRCLIAEGSR 171
Query: 172 HVLGWKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQP 231
+++ P ++ L ++LR + LS+D+ LRF+ WEGYPL D + + I +
Sbjct: 172 NIMDGCDPVRVFENG----LPILLRHINLSEDLELRFSEKSWEGYPLIPDKFADWI--EG 225
Query: 232 DEEQIYGIFMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELS 291
E + +++N T+L + S I +F +A PE + RGI TP+E R V
Sbjct: 226 IEGDVLTLYLNYTSLCLHHRNKSMIADFIRAFPETLKSRGIEMITPSEAVNRFNPV---K 282
Query: 292 VPYPLSWRDEERDVSTWLGNSMQREAFNKLYSIADRV----RIANDSRINQDWDYLQASD 347
+P S + + +GN Q+ +L I + + N ++ Q + +LQ S+
Sbjct: 283 LPTLGSEQTIRYGMHNAVGNHAQQLYLRELVRIGEELAEIKEKPNYQKLKQVFGHLQQSE 342
Query: 348 NFSAMSTKPVPVGVDRGIYSTPFDAFTNYMNILGDF 383
+M + G +R + NY +IL D
Sbjct: 343 ILFSMGPENTREGYERAV---------NYYSILSDL 369
>gi|85859160|ref|YP_461362.1| alpha-amylase [Syntrophus aciditrophicus SB]
gi|85722251|gb|ABC77194.1| alpha-amylase [Syntrophus aciditrophicus SB]
Length = 901
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 101/365 (27%), Positives = 174/365 (47%), Gaps = 34/365 (9%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
M ++ YF++HQ + L R D + +D+ EN +RSY+PA+ +I+
Sbjct: 1 MSSVIFYFQLHQPLRLHPDR------DKFLWDE-ENREIFLKASERSYIPAIGMFTDLIR 53
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTG----CVEFLAEPYSHGLAALGN 116
+ G F++ L +SG +E + Y P +I+ ++ L G VEFL E Y H LA+L N
Sbjct: 54 NHPG-FRITLSMSGTFLEQAQTYHPSLIQALRSLLDAGKESQQVEFLCETYYHSLASLFN 112
Query: 117 E---DSFKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHV 173
+ F+ +V + I++ F P RN+ LIY++ I + A+M + ++ E ++
Sbjct: 113 DPHKQEFRDQVSLHREAIRKLFGIFPLSFRNTELIYNNSIADIVADMGYVSILCEPRENS 172
Query: 174 -----LGWKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIA 228
G SP+ ++ A L +I R++ LS+D++ RF++ +PL ++Y IA
Sbjct: 173 HMGAGTGSISPNSVFR-ARGTHLVVIPRNIALSNDVAFRFSS-----HPLTPEEYAASIA 226
Query: 229 SQPDEEQIYGIFMNLTALGIEQPLHSNILEFFKALPEC-ARHRGISFSTPTEVCERAKSV 287
E + G +L +G I +F++ LP ++ + TPT V R K
Sbjct: 227 RGDGEVILLG--YDLEHIGGHIREEKGIFDFWRGLPAALEQYPDLLVETPTSVATRFKDA 284
Query: 288 G----ELSVPYPLSWRDEERDVSTWLGNSMQREAFNKLYSIADRVRIANDSRINQDWDYL 343
++S SW D R+ WL ++ Q E F + + R A + + W L
Sbjct: 285 PLPSLDISGLSTSSWLDVIRNTFGWLESAAQFELFKDMEGMEGVARRAGGELLTR-WRNL 343
Query: 344 QASDN 348
ASD+
Sbjct: 344 TASDH 348
>gi|91772482|ref|YP_565174.1| glycoside hydrolase, family 57 [Methanococcoides burtonii DSM 6242]
gi|91711497|gb|ABE51424.1| glycoside hydrolase, family 57 [Methanococcoides burtonii DSM 6242]
Length = 376
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 99/381 (25%), Positives = 186/381 (48%), Gaps = 19/381 (4%)
Query: 1 MKTICLYFEIHQIIHLRRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPALDTLLQMIK 60
M+++C+ E+H L+ Y + G ++ Y ++ + ++++ + T ++
Sbjct: 1 MQSVCICSEVHLPCVLKWY-WPSEGYRSPEFETYFDQSKMYSALEKNVPGIIRTNEALLD 59
Query: 61 DSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLAAL-GNEDS 119
+ K +SG+ ++ ++ P VIE +EL G F A PY H +++L +
Sbjct: 60 SIDNGAKYTFDISGIFLDQC-KWNPAVIESFKELKDRG-AGFSASPYYHSISSLFPDTKE 117
Query: 120 FKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAKHVLGWKSP 179
FK +V KIKE F+ P+ N+ LI + E+ + EMKFK +I+EG++++L P
Sbjct: 118 FKEQVSMHRDKIKEIFNVNPRTFINTELILTKELSAILKEMKFKCLISEGSENLLYGNDP 177
Query: 180 HYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQPDEEQIYGI 239
+ +Y I P L LR + LS+DI +RF++ +W YPL AD + + IA+ E + +
Sbjct: 178 NQVYDNHI-PTL---LRHIPLSEDIEIRFSDQKWISYPLIADKFASWIANM--EGDVTTL 231
Query: 240 FMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTEVCERAKSVGELSVPYPLSWR 299
+++ Q S+IL+F LP GIS TP E + K+ +P ++
Sbjct: 232 HFKYSSILSHQHNRSDILQFLIDLPASFEKYGISMITPEEALKNFKTK---ELPSIMNKS 288
Query: 300 DEERDVSTWLGNSMQREAFNKLYSIADRVRIANDS----RINQDWDYLQASDNFSAMSTK 355
+ +GN Q ++L SI + ++ + ++N + YLQ S+ M +
Sbjct: 289 TSRYGMHNLMGNHPQHLYLHELISIGEILQSIKSAPEYDKLNCIYRYLQQSEILLEMGSD 348
Query: 356 PVPVGVDRGIYSTPFDAFTNY 376
+G ++ + F A +++
Sbjct: 349 NQNIGYEKAV--NIFSALSDF 367
>gi|126179214|ref|YP_001047179.1| Alpha-amylase [Methanoculleus marisnigri JR1]
gi|125862008|gb|ABN57197.1| Alpha-amylase [Methanoculleus marisnigri JR1]
Length = 490
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 71/288 (24%), Positives = 125/288 (43%), Gaps = 27/288 (9%)
Query: 4 ICLYFEIHQIIHL-----------RRYRFFDIGTDHYYYDDYENERSITDIVQRSYMPAL 52
+CL F+IH +L +R ++ ++ D E+ R + D RS+ P
Sbjct: 11 VCLGFDIHYPCYLNPGFQPDLVKGKR----NVKESYFNPDVKEDLRGVID---RSFRPTT 63
Query: 53 DTLLQMIKDSNGYFKVALCLSGVGIESLERYAPEVIEKIQELAKTGCVEFLAEPYSHGLA 112
+ LL+++ + F A +SG +E+L+ + PE++E + A E LA Y H +A
Sbjct: 64 ELLLELLDEG---FTCAFAISGTVVENLDAWYPEMLELLSRAATHPNAELLAGTYYHSVA 120
Query: 113 A-LGNEDSFKAEVKRLSKKIKEYFDYTPKVLRNSSLIYSDEIGRMAAEMKFKGMITEGAK 171
+ F E+ +KE+F TP ++ + A + I EG +
Sbjct: 121 GQFTDLTEFTDELLMHRNLMKEHFSVTPTTFAHTDYPITPTTAEALAGAGIEAAIIEGGE 180
Query: 172 HVLGWKSPHYLYHCAIAPQLKLILRDVTLSDDISLRFNNSEWEGYPLFADDYINKIASQP 231
+ P++ Y P +++ LSDDI++RF W+ +PL A Y ++ P
Sbjct: 181 GPALERDPNHTYTYRGLP---VLVTHCDLSDDIAVRFPWRGWDKWPLMAGQYAGWLSVSP 237
Query: 232 DEEQIYGIFMNLTALGIEQPLHSNILEFFKALPECARHRGISFSTPTE 279
+ +F++ G + ILEF +ALP GI P++
Sbjct: 238 GD--YITLFLDYRIFGDFIGAEAGILEFLRALPSALAAEGIETIRPSD 283
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.318 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,691,706,028
Number of Sequences: 5470121
Number of extensions: 72386146
Number of successful extensions: 284733
Number of sequences better than 1.0e-05: 52
Number of HSP's better than 0.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 284509
Number of HSP's gapped (non-prelim): 58
length of query: 465
length of database: 1,894,087,724
effective HSP length: 136
effective length of query: 329
effective length of database: 1,150,151,268
effective search space: 378399767172
effective search space used: 378399767172
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 132 (55.5 bits)