NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:890039     UniGene Rn.100250     Rattus norvegicus (Norway rat)   Arhgef18
Rho/rac guanine nucleotide exchange factor (GEF) 18 (Arhgef18)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_001100585.1 rho/rac guanine nucleotide exchange factor (GEF) 18 R. norvegicus 100.0 1183
NP_598723.3 rho/rac guanine nucleotide exchange factor (GEF) 18 M. musculus 94.4 1020
NP_056133.2 Rho-specific guanine nucleotide exchange factor p114 isoform a H. sapiens 83.5 1014
XP_690750.3 PREDICTED: similar to rho/rac guanine nucleotide exchange factor (GEF) 18 D. rerio 54.9 1031

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; embryonic tissue; dorsal root ganglion; uncharacterized tissue; brain; artery; prostate; kidney; small intestine; eye; spleen; heart; placenta; pancreas; colon
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12p12
UniSTS entry: RH131614
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

NM_001107115.1 Rattus norvegicus rho/rac guanine nucleotide exchange factor (GEF) 18 (Arhgef18), mRNA PA

EST sequences (10 of 41) [Show all sequences]

X94518.1 Clone sap30e brain
AI045436.1 Clone UI-R-C1-jz-a-08-0-UI mixed 3' read PA
AI072099.1 Clone UI-R-C2-nf-e-07-0-UI mixed 3' read A
AI511084.1 Clone UI-R-C2p-of-h-12-0-UI mixed 3' read A
AW921116.1 Clone RGIHN56 mixed 5' read
BE114907.1 Clone UI-R-BJ1-awq-h-05-0-UI heart 3' read A
BF545604.1 Clone UI-R-C1-jz-a-08-0-UI mixed 5' read
BF549606.1 Clone UI-R-C2-mv-g-02-0-UI mixed 5' read
BF549646.1 Clone UI-R-C2-nf-e-07-0-UI mixed 5' read A
BI274392.1 Clone UI-R-CW0-bwi-d-06-0-UI artery 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help