BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SGO_1026
(582 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157076323|gb|ABV11006.1| rhamnosyltransferase [Streptoco... 1170 0.0
gi|55823377|ref|YP_141818.1| polysaccharide biosynthesis pr... 857 0.0
gi|116628171|ref|YP_820790.1| Lipopolysaccharide biosynthes... 852 0.0
gi|30024644|dbj|BAC75698.1| rhamnosyltransferase [Streptoco... 781 0.0
gi|3399709|dbj|BAA32094.1| rgpFc [Streptococcus mutans] 780 0.0
gi|30024633|dbj|BAC75688.1| rhamnosyltransferase [Streptoco... 780 0.0
gi|24379285|ref|NP_721240.1| RgpFc protein [Streptococcus m... 779 0.0
gi|94988294|ref|YP_596395.1| alpha-L-Rha alpha-1,2-L-rhamno... 733 0.0
gi|21910063|ref|NP_664331.1| hypothetical protein SpyM3_052... 733 0.0
gi|94990172|ref|YP_598272.1| alpha-L-Rha alpha-1,2-L-rhamno... 732 0.0
gi|50913971|ref|YP_059943.1| alpha-L-Rha alpha-1,2-L-rhamno... 730 0.0
gi|19745874|ref|NP_607010.1| hypothetical protein spyM18_08... 715 0.0
gi|139474025|ref|YP_001128741.1| rhamnan synthesis protein ... 714 0.0
gi|15674835|ref|NP_269009.1| conserved hypothetical protein... 713 0.0
gi|94994091|ref|YP_602189.1| alpha-L-Rha alpha-1,2-L-rhamno... 712 0.0
gi|71903253|ref|YP_280056.1| alpha-L-Rha alpha-1,2-L-rhamno... 711 0.0
gi|56808559|ref|ZP_00366292.1| COG3754: Lipopolysaccharide ... 711 0.0
gi|55821450|ref|YP_139892.1| polysaccharide biosynthesis pr... 677 0.0
gi|15672189|ref|NP_266363.1| polysaccharide biosynthesis pr... 582 e-164
gi|116511036|ref|YP_808252.1| Lipopolysaccharide biosynthes... 450 e-124
gi|125623094|ref|YP_001031577.1| alpha-L-Rha alpha-1,2-L-rh... 445 e-123
gi|125718317|ref|YP_001035450.1| Lipopolysaccharide biosynt... 411 e-113
gi|81096905|ref|ZP_00875230.1| conserved hypothetical prote... 266 3e-69
gi|146318939|ref|YP_001198651.1| polysaccharide biosynthesi... 264 2e-68
gi|146321147|ref|YP_001200858.1| polysaccharide biosynthesi... 204 1e-50
gi|13476280|ref|NP_107850.1| hypothetical protein mlr7559 [... 201 1e-49
gi|13476281|ref|NP_107851.1| hypothetical protein mlr7560 [... 193 3e-47
gi|3132260|dbj|BAA28137.1| unnamed protein product [Actinob... 188 8e-46
gi|13476282|ref|NP_107852.1| hypothetical protein mlr7561 [... 170 2e-40
gi|119026520|ref|YP_910365.1| hypothetical protein BAD_1502... 164 1e-38
gi|156863802|gb|EDO57233.1| hypothetical protein CLOL250_02... 142 9e-32
gi|154509526|ref|ZP_02045168.1| hypothetical protein ACTODO... 137 2e-30
gi|90425670|ref|YP_534040.1| glycosyl transferase, group 1 ... 124 2e-26
gi|82703518|ref|YP_413084.1| Glycosyl transferase, group 1 ... 122 5e-26
gi|83582737|ref|YP_425043.1| Glycosyl transferase, group 1 ... 120 3e-25
gi|109648358|ref|ZP_01372261.1| conserved hypothetical prot... 118 1e-24
gi|125718324|ref|YP_001035457.1| Glycosyltransferase, putat... 110 4e-22
gi|81096900|ref|ZP_00875225.1| Glycosyl transferase, group ... 105 8e-21
gi|33862360|ref|NP_893920.1| glycosyltransferase [Prochloro... 105 1e-20
gi|146318933|ref|YP_001198645.1| Lipopolysaccharide biosynt... 104 1e-20
gi|17938295|ref|NP_535084.1| hypothetical protein Atu4606 [... 101 1e-19
gi|156863801|gb|EDO57232.1| hypothetical protein CLOL250_02... 101 1e-19
gi|90425669|ref|YP_534039.1| putative glycosyltransferase [... 101 2e-19
gi|15890382|ref|NP_356054.1| hypothetical protein AGR_L_543... 100 4e-19
gi|78211746|ref|YP_380525.1| Lipopolysaccharide biosynthesi... 94 2e-17
gi|78184215|ref|YP_376650.1| possible glycosyltransferase [... 92 1e-16
gi|46241623|gb|AAS83008.1| polysaccharide biosynthesis prot... 91 2e-16
gi|116071137|ref|ZP_01468406.1| possible glycosyltransferas... 91 2e-16
gi|148260354|ref|YP_001234481.1| Lipopolysaccharide biosynt... 91 2e-16
gi|116071633|ref|ZP_01468901.1| Lipopolysaccharide biosynth... 86 5e-15
gi|89900872|ref|YP_523343.1| Lipopolysaccharide biosynthesi... 79 7e-13
gi|84501312|ref|ZP_00999517.1| hypothetical protein OB2597_... 77 3e-12
gi|148927812|ref|ZP_01811237.1| Lipopolysaccharide biosynth... 74 2e-11
gi|33865175|ref|NP_896734.1| possible glycosyltransferase [... 73 5e-11
gi|82702301|ref|YP_411867.1| Lipopolysaccharide biosynthesi... 73 6e-11
gi|119876653|ref|ZP_01643696.1| Lipopolysaccharide biosynth... 72 9e-11
gi|78213547|ref|YP_382326.1| possible glycosyltransferase [... 72 1e-10
gi|153898672|ref|ZP_02019238.1| Lipopolysaccharide biosynth... 71 2e-10
gi|21109952|gb|AAM38419.1| conserved hypothetical protein [... 71 2e-10
gi|55846839|gb|AAV67425.1| glycosyltransferase [Xanthomonas... 71 3e-10
gi|77748730|ref|NP_643883.2| hypothetical protein XAC3576 [... 70 4e-10
gi|21759464|sp|O34262|WXCX_XANCP Uncharacterized protein wx... 69 8e-10
gi|77747764|ref|NP_636021.2| hypothetical protein XCC0629 [... 69 8e-10
gi|71735705|ref|YP_273244.1| hypothetical protein PSPPH_097... 69 9e-10
gi|58425017|gb|AAW74054.1| conserved hypothetical protein [... 69 1e-09
gi|84622385|ref|YP_449757.1| hypothetical protein XOO_0728 ... 69 1e-09
gi|122879048|ref|YP_199439.6| hypothetical protein XOO0800 ... 68 1e-09
gi|60393677|gb|AAX19606.1| WxocB [Xanthomonas oryzae pv. or... 68 2e-09
gi|16519756|ref|NP_443876.1| Y4gN [Rhizobium sp. NGR234] >g... 68 2e-09
gi|60393714|gb|AAX19633.1| WxocB [Xanthomonas oryzae pv. or... 68 2e-09
gi|60393683|gb|AAX19610.1| WxocB [Xanthomonas oryzae pv. or... 68 2e-09
gi|60393680|gb|AAX19608.1| WxocB [Xanthomonas oryzae pv. or... 67 2e-09
gi|55846840|gb|AAV67426.1| glycosyltransferase [Xanthomonas... 67 3e-09
gi|60393702|gb|AAX19624.1| WxocB [Xanthomonas oryzae pv. or... 67 3e-09
gi|84357057|ref|ZP_00981887.1| COG0438: Glycosyltransferase... 66 7e-09
gi|124870915|gb|EAY62631.1| Glycosyl transferase [Burkholde... 66 7e-09
gi|146279467|ref|YP_001169625.1| hypothetical protein Rsph1... 66 8e-09
gi|88808074|ref|ZP_01123585.1| Glycosyl transferase, group ... 65 9e-09
gi|60393689|gb|AAX19614.1| WxocB [Xanthomonas oryzae pv. or... 64 3e-08
gi|148556910|ref|YP_001264492.1| glycosyl transferase, grou... 63 6e-08
gi|83950907|ref|ZP_00959640.1| hypothetical protein ISM_073... 62 1e-07
gi|77404644|ref|YP_345218.1| possible glycosyltransferase [... 61 2e-07
gi|153009780|ref|YP_001370995.1| Lipopolysaccharide biosynt... 60 3e-07
gi|109648359|ref|ZP_01372262.1| Lipopolysaccharide biosynth... 60 3e-07
gi|78184210|ref|YP_376645.1| Lipopolysaccharide biosynthesi... 60 6e-07
gi|14090418|gb|AAK53494.1| putative methyltransferase [Xant... 59 7e-07
gi|116071634|ref|ZP_01468902.1| hypothetical protein BL107_... 59 8e-07
gi|134297301|ref|YP_001121036.1| Lipopolysaccharide biosynt... 59 1e-06
gi|78213552|ref|YP_382331.1| Lipopolysaccharide biosynthesi... 58 2e-06
gi|23009067|ref|ZP_00050256.1| COG3754: Lipopolysaccharide ... 58 2e-06
>gi|157076323|gb|ABV11006.1| rhamnosyltransferase [Streptococcus gordonii str. Challis substr.
CH1]
Length = 582
Score = 1170 bits (3028), Expect = 0.0, Method: Composition-based stats.
Identities = 582/582 (100%), Positives = 582/582 (100%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLL 60
MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLL
Sbjct: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLL 60
Query: 61 RKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWG 120
RKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWG
Sbjct: 61 RKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWG 120
Query: 121 MTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLV 180
MTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLV
Sbjct: 121 MTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLV 180
Query: 181 QAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILNDI 240
QAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILNDI
Sbjct: 181 QAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILNDI 240
Query: 241 ENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAEF 300
ENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAEF
Sbjct: 241 ENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAEF 300
Query: 301 LHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHLS 360
LHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHLS
Sbjct: 301 LHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHLS 360
Query: 361 QYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSFF 420
QYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSFF
Sbjct: 361 QYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSFF 420
Query: 421 RFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFDL 480
RFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFDL
Sbjct: 421 RFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFDL 480
Query: 481 NMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNREDL 540
NMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNREDL
Sbjct: 481 NMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNREDL 540
Query: 541 QPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGKS 582
QPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGKS
Sbjct: 541 QPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGKS 582
>gi|55823377|ref|YP_141818.1| polysaccharide biosynthesis protein [Streptococcus thermophilus
CNRZ1066]
gi|55739362|gb|AAV63003.1| polysaccharide biosynthesis protein [Streptococcus thermophilus
CNRZ1066]
Length = 581
Score = 857 bits (2215), Expect = 0.0, Method: Composition-based stats.
Identities = 417/580 (71%), Positives = 490/580 (84%), Gaps = 1/580 (0%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDEL-KKELVDEVL 59
MERLLLYVH+NKFN IS HVLYQLEK+RPL+ +V+FISNS++ +D +D L ++LVD++L
Sbjct: 1 MERLLLYVHYNKFNFISGHVLYQLEKIRPLYSRVVFISNSQLPEDVKDHLSNQQLVDDIL 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
R+N GFDFAAWRDGMK VGF++L +DSVTLMNDTCFGPLWDLE IYQ FE D VDFW
Sbjct: 61 ERQNSGFDFAAWRDGMKTVGFDQLSHFDSVTLMNDTCFGPLWDLESIYQQFENDLEVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
GMTNYRKDKDFNEHIQSYYLSFK+ V+ S +F FWQ +QDFT VQDVID+YET++TTN
Sbjct: 121 GMTNYRKDKDFNEHIQSYYLSFKKQVIESCSFHEFWQGVQDFTNVQDVIDNYETKITTNF 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
+ AGF Y+TVF+TI D +GML+PDFSYYNPT+ILK++VPFIKVK+IA N+G+ PYI ++
Sbjct: 181 LDAGFRYKTVFHTIHEDTTGMLHPDFSYYNPTAILKHKVPFIKVKSIANNQGIMPYIFDE 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
+E +DYP+DLI+ HMS ID PDYPYLL RK L DKK+AVHLHVFYVDLL E
Sbjct: 241 LERVSDYPLDLILNHMSMIDRPDYPYLLSRKYLKNQELTGDFDKKVAVHLHVFYVDLLEE 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
FL AF+ FHF+YDL+ITTD E+KK EI IL + A + VTGN+GRDVLPML LK L
Sbjct: 301 FLDAFQDFHFAYDLWITTDIEEKKQEIEQILSRRSQDATIVVTGNIGRDVLPMLLLKEKL 360
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
S+YDY+GHFHTKKSKEAD+WAGESWRKELI+MLV PADQI++ + + +G+ I DIP++
Sbjct: 361 SRYDYVGHFHTKKSKEADFWAGESWRKELIDMLVKPADQILANMEANPKVGITIGDIPTY 420
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
FR+NRIVVAWNEALISPEMNKLW+RM K +DFK +NTFVMSYGTFVWFKYDAL PLFD
Sbjct: 421 FRYNRIVVAWNEALISPEMNKLWQRMGATKNIDFKNLNTFVMSYGTFVWFKYDALKPLFD 480
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNRED 539
LN+T DVP+EPLPQNSILHAIERLLVYIAWD++YDF+IS N LT FIDNKQLNNRED
Sbjct: 481 LNLTVSDVPAEPLPQNSILHAIERLLVYIAWDQKYDFRISQNPHVLTPFIDNKQLNNRED 540
Query: 540 LQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGK 579
LQPHTFVDFNQIGGIKGA+KYI IGPARA+KYILKRLL +
Sbjct: 541 LQPHTFVDFNQIGGIKGALKYIVIGPARAVKYILKRLLSR 580
>gi|116628171|ref|YP_820790.1| Lipopolysaccharide biosynthesis protein [Streptococcus thermophilus
LMD-9]
gi|116101448|gb|ABJ66594.1| Lipopolysaccharide biosynthesis protein [Streptococcus thermophilus
LMD-9]
Length = 581
Score = 852 bits (2202), Expect = 0.0, Method: Composition-based stats.
Identities = 414/580 (71%), Positives = 488/580 (84%), Gaps = 1/580 (0%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKE-LVDEVL 59
MERLLLYVH+NKFN IS HVLYQLEK+RPL+ +V+FISNS + +D +D L + LVD++L
Sbjct: 1 MERLLLYVHYNKFNFISGHVLYQLEKIRPLYSRVVFISNSHLPEDVKDHLSNQHLVDDIL 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
R+N GFDFAAWRDGMK VGF++L +DSVTLMNDTCFGPLWDLE IY+ FE + VDFW
Sbjct: 61 ERQNSGFDFAAWRDGMKTVGFDQLAHFDSVTLMNDTCFGPLWDLEPIYERFENENEVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
GMTNYRK+KDFNEHIQSYYLSFK+ V+ S +F FWQ +QDFT VQDVID+YET++TTN
Sbjct: 121 GMTNYRKNKDFNEHIQSYYLSFKKQVIESCSFHEFWQGVQDFTNVQDVIDNYETKITTNF 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
+ AGF Y+TVF+TI D +GML+PDFSYYNPT+ILK++VPFIKVK+IA N+G+ PYI ++
Sbjct: 181 LDAGFRYKTVFHTIHEDTTGMLHPDFSYYNPTAILKHKVPFIKVKSIANNQGIMPYIFDE 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
+E +DYP+DLI+ HMS ID PDYPYLL RK L DKK+AVHLHVFYVDLL E
Sbjct: 241 LERVSDYPLDLILNHMSMIDRPDYPYLLSRKYLKNQELTGDFDKKVAVHLHVFYVDLLEE 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
FL AF+ FHF+YDL+ITTD E+KK EI IL + A + VTGN+GRDVLPML LK L
Sbjct: 301 FLDAFQDFHFAYDLWITTDVEEKKQEIEQILSRRSQDATIVVTGNIGRDVLPMLLLKEKL 360
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
S+YDY+GHFHTKKSKEAD+WAGESWRKELI+MLV PADQI++ + + +G+ I DIP++
Sbjct: 361 SRYDYVGHFHTKKSKEADFWAGESWRKELIDMLVKPADQILANMEANPKVGITIGDIPTY 420
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
FR+NRIVVAWNEALISPEMNKLW+RM K +DFK +NTFVMSYGTFVWFKYDAL PLFD
Sbjct: 421 FRYNRIVVAWNEALISPEMNKLWQRMGATKNIDFKNLNTFVMSYGTFVWFKYDALKPLFD 480
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNRED 539
LN+T DVP+EPLPQNSILHAIERLLVYIAWD++YDF+IS N LT FIDNKQLNNRED
Sbjct: 481 LNLTVSDVPAEPLPQNSILHAIERLLVYIAWDQKYDFRISQNPHVLTPFIDNKQLNNRED 540
Query: 540 LQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGK 579
LQPHTFVDFNQIGGIKGA+KYI IGPARA+KYILKRLL +
Sbjct: 541 LQPHTFVDFNQIGGIKGALKYIVIGPARAVKYILKRLLSR 580
>gi|30024644|dbj|BAC75698.1| rhamnosyltransferase [Streptococcus mutans]
Length = 583
Score = 781 bits (2016), Expect = 0.0, Method: Composition-based stats.
Identities = 382/583 (65%), Positives = 470/583 (80%), Gaps = 1/583 (0%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELK-KELVDEVL 59
M+RLLLYVHFNK+N++S HV+YQL +MR LF KVIFISNS+++ L+ K L+D+ +
Sbjct: 1 MKRLLLYVHFNKYNRVSSHVVYQLTQMRSLFSKVIFISNSQVADADVKMLREKHLIDDFI 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
R+N GFDFAAWRDGM VGF+EL YDSVT MNDTCFGPLW++ IYQ+FE VDFW
Sbjct: 61 QRQNSGFDFAAWRDGMVFVGFDELVTYDSVTTMNDTCFGPLWEMYSIYQEFETKTTVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
G+TN R K F EHIQSY++SFK +V+ S AF+ FW+NI+++ +VQ VID YET+VTT L
Sbjct: 121 GLTNNRATKSFREHIQSYFISFKASVLRSTAFRDFWENIKEYQDVQKVIDQYETKVTTTL 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
+ AGF Y VF+T + DAS ML+ DFSYYNPT+IL +RVPFIKVK I N+ +TPY+LND
Sbjct: 181 LDAGFQYDVVFDTTKEDASHMLHADFSYYNPTAILNHRVPFIKVKAIDNNQHITPYLLND 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
I+ + YP+DLIV HMS I+ PD+ YLLG K + + L ++K+AVHLHVFYVDLL E
Sbjct: 241 IQKNSTYPIDLIVSHMSEINYPDFSYLLGHKYVKKRERVDLKNQKVAVHLHVFYVDLLEE 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
FL AF+ FHFSYDLFITTDS+ KK EI IL +A+VFVTGN+GRDVLPMLKLK +L
Sbjct: 301 FLTAFKQFHFSYDLFITTDSDDKKAEIEEILSANSQEAQVFVTGNIGRDVLPMLKLKNYL 360
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
S YD++GHFHTKKSKEAD+WAG+SWR+ELI+MLV PAD I++QL Q+ +GLVIAD+P+F
Sbjct: 361 STYDFVGHFHTKKSKEADFWAGQSWREELIDMLVKPADNILAQLQQNPKIGLVIADMPTF 420
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
FR+N+IV AWNE LI+PEMN LW++M K++DF +TFVMSYGTFVWFKYDAL PLFD
Sbjct: 421 FRYNKIVDAWNEHLIAPEMNTLWQKMGMTKKIDFNAFHTFVMSYGTFVWFKYDALKPLFD 480
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNRED 539
LN+T++DVP EPLPQNSILHAIERLL+YIAW++ YDF+IS N + LT FIDNK LN R +
Sbjct: 481 LNLTDDDVPEEPLPQNSILHAIERLLIYIAWNEHYDFRISKNPVDLTPFIDNKLLNERGN 540
Query: 540 LQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGKS 582
P+TF+DFN +GGIKGA KYIFIGPARA+KYILKR L K KS
Sbjct: 541 SAPNTFIDFNHMGGIKGAFKYIFIGPARAVKYILKRSLQKIKS 583
>gi|3399709|dbj|BAA32094.1| rgpFc [Streptococcus mutans]
Length = 583
Score = 780 bits (2014), Expect = 0.0, Method: Composition-based stats.
Identities = 383/583 (65%), Positives = 470/583 (80%), Gaps = 1/583 (0%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELK-KELVDEVL 59
M+RLLLYVHFNK+N++S HV+YQL +MR LF KVIFISNS+++ L+ K L+D+ +
Sbjct: 1 MKRLLLYVHFNKYNRVSSHVVYQLTQMRSLFSKVIFISNSQVADADVKMLREKHLIDDFI 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
R+N GFDFAAWRDGM VGF+EL YDSVT MNDTCFGPLW++ IYQ+FE VDFW
Sbjct: 61 QRQNSGFDFAAWRDGMVFVGFDELVTYDSVTTMNDTCFGPLWEMYSIYQEFETKTTVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
G+TN R K F EHIQSY++SFK +V+ S AF+ FW+NI+++ +VQ VID YET+VTT L
Sbjct: 121 GLTNNRATKSFREHIQSYFISFKASVLRSTAFRDFWENIKEYQDVQKVIDQYETKVTTTL 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
+ AGF Y VF+T + DAS ML+ DFSYYNPT+IL +RVPFIKVK I N+ +TPY+LND
Sbjct: 181 LDAGFQYDVVFDTTKEDASHMLHADFSYYNPTAILNHRVPFIKVKAIDNNQHITPYLLND 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
I+ + YP+DLIV HMS I+ PD+ YLLG K + + L ++K+AVHLHVFYVDLL E
Sbjct: 241 IQKNSTYPIDLIVSHMSEINYPDFSYLLGHKYVKKRERVDLKNQKVAVHLHVFYVDLLEE 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
FL AF+ FHFSYDLFITTDS+ KK EI IL +A+VFVTGN+GRDVLPMLKLK +L
Sbjct: 301 FLTAFKQFHFSYDLFITTDSDDKKAEIEEILSANGQEAQVFVTGNIGRDVLPMLKLKNYL 360
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
S YD++GHFHTKKSKEAD+WAG+SWR+ELI+MLV PAD I++QL Q+ +GLVIAD+P+F
Sbjct: 361 SAYDFVGHFHTKKSKEADFWAGQSWREELIDMLVKPADNILAQLQQNPKIGLVIADMPTF 420
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
FR+N+IV AWNE LI+PEMN LW++M K++DF +TFVMSYGTFVWFKYDAL PLFD
Sbjct: 421 FRYNKIVDAWNEHLIAPEMNTLWQKMGMTKKIDFNAFHTFVMSYGTFVWFKYDALKPLFD 480
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNRED 539
LN+T++DVP EPLPQNSILHAIERLL+YIAW++ YDF+IS N + LT FIDNK LN R +
Sbjct: 481 LNLTDDDVPEEPLPQNSILHAIERLLIYIAWNEHYDFRISKNPVDLTPFIDNKLLNERGN 540
Query: 540 LQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGKS 582
P+TFVDFN +GGIKGA KYIFIGPARA+KYILKR L K KS
Sbjct: 541 SAPNTFVDFNYMGGIKGAFKYIFIGPARAVKYILKRSLQKIKS 583
>gi|30024633|dbj|BAC75688.1| rhamnosyltransferase [Streptococcus mutans]
Length = 583
Score = 780 bits (2014), Expect = 0.0, Method: Composition-based stats.
Identities = 381/583 (65%), Positives = 470/583 (80%), Gaps = 1/583 (0%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELK-KELVDEVL 59
M+RLLLYVHFNK+N++S HV+YQL +MR LF KVIFISNS+++ L+ K L+D+ +
Sbjct: 1 MKRLLLYVHFNKYNRVSSHVVYQLTQMRSLFSKVIFISNSQVADADVKMLREKHLIDDFI 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
R+N GFDFAAWRDGM VGF+EL YDSVT MNDTCFGPLW++ IYQ+FE VDFW
Sbjct: 61 QRQNSGFDFAAWRDGMVFVGFDELVTYDSVTTMNDTCFGPLWEIYSIYQEFETKTTVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
G+TN R K F EHIQSY++SFK +V+ S AF+ FW+NI+++ +VQ VID YET+VTT L
Sbjct: 121 GLTNNRATKSFREHIQSYFISFKASVLRSTAFRDFWENIKEYQDVQKVIDQYETKVTTTL 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
+ AGF Y VF+T + DAS ML+ DFSYYNPT+IL +RVPFIKVK I N+ +TPY+LND
Sbjct: 181 LDAGFQYDVVFDTTKEDASNMLHADFSYYNPTAILNHRVPFIKVKAIDNNQHITPYLLND 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
I+ + YP+DLIV HMS I+ PD+ YLLG K + + L ++K+AVHLHVFYVDLL E
Sbjct: 241 IQKNSTYPIDLIVSHMSEINYPDFSYLLGHKYVKKRERVDLKNQKVAVHLHVFYVDLLEE 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
FL AF+ FHFSYDLFITTDS+ KK EI +L +A++FVTGN+GRDVLPMLKLK +L
Sbjct: 301 FLTAFKQFHFSYDLFITTDSDDKKAEIEEVLSANSQEAQIFVTGNIGRDVLPMLKLKNYL 360
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
S YD++GHFHTKKSKEAD+WAG+SWR+ELI+MLV PAD I++QL Q+ +GLVIAD+P+F
Sbjct: 361 STYDFVGHFHTKKSKEADFWAGQSWREELIDMLVKPADNILAQLQQNPKIGLVIADMPTF 420
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
FR+N+IV AWNE LI+PEMN LW++M K++DF +TFVMSYGTFVWFKYDAL PLFD
Sbjct: 421 FRYNKIVDAWNEHLIAPEMNTLWQKMGMTKKIDFNAFHTFVMSYGTFVWFKYDALKPLFD 480
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNRED 539
LN+T++DVP EPLPQNSILHAIERLL+YIAW++ YDF+IS N + LT FIDNK LN R +
Sbjct: 481 LNLTDDDVPEEPLPQNSILHAIERLLIYIAWNEHYDFRISKNPVDLTPFIDNKLLNERGN 540
Query: 540 LQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGKS 582
P+TFVDFN +GGIKGA KYIFIGPARA+KYILKR L K KS
Sbjct: 541 SAPNTFVDFNYMGGIKGAFKYIFIGPARAVKYILKRSLQKIKS 583
>gi|24379285|ref|NP_721240.1| RgpFc protein [Streptococcus mutans UA159]
gi|24377204|gb|AAN58546.1|AE014924_6 RgpFc protein [Streptococcus mutans UA159]
Length = 583
Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats.
Identities = 383/583 (65%), Positives = 469/583 (80%), Gaps = 1/583 (0%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELK-KELVDEVL 59
M+RLLLYVHFNK+N++S HV+YQL +MR LF KVIFISNS+++ L+ K L+D+ +
Sbjct: 1 MKRLLLYVHFNKYNRVSSHVVYQLTQMRSLFSKVIFISNSQVADADVKMLREKHLIDDFI 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
R+N GFDFAAWRDGM VGF+EL YDSVT MNDTCFGPLW++ IYQ+FE VDFW
Sbjct: 61 QRQNSGFDFAAWRDGMVFVGFDELVTYDSVTTMNDTCFGPLWEMYSIYQEFETKTTVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
G+TN R K F EHIQSY++SFK +V+ S AF+ FW+NI+++ +VQ VID YET+VTT L
Sbjct: 121 GLTNNRATKSFREHIQSYFISFKASVLRSTAFRDFWENIKEYQDVQKVIDQYETKVTTTL 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
+ AGF Y VF+T + DAS ML+ DFSYYNPT+IL +RVPFIKVK I N+ +TPY+LND
Sbjct: 181 LDAGFQYDVVFDTTKEDASHMLHADFSYYNPTAILNHRVPFIKVKAIDNNQHITPYLLND 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
I+ + YP+DLIV HMS I+ PD+ YLLG K + + L ++K AVHLHVFYVDLL E
Sbjct: 241 IQKNSTYPIDLIVSHMSEINYPDFSYLLGHKYVKKRERVDLKNQKAAVHLHVFYVDLLEE 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
FL AF+ FHFSYDLFITTDS+ KK EI IL +A+VFVTGN+GRDVLPMLKLK +L
Sbjct: 301 FLTAFKQFHFSYDLFITTDSDDKKAEIEEILSANSQEAQVFVTGNIGRDVLPMLKLKNYL 360
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
S YD++GHFHTKKSKEAD+WAG+SWR+ELI+MLV PAD I++QL Q+ +GLVIAD+P+F
Sbjct: 361 STYDFVGHFHTKKSKEADFWAGQSWREELIDMLVKPADNILAQLQQNPKIGLVIADMPTF 420
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
FR+N+IV AWNE LI+PEMN LW++M K++DF +TFVMSYGTFVWFKYDAL PLFD
Sbjct: 421 FRYNKIVDAWNEHLIAPEMNTLWQKMGMTKKIDFNAFHTFVMSYGTFVWFKYDALKPLFD 480
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNRED 539
LN+T++DVP EPLPQNSILHAIERLL+YIAW++ YDF+IS N + LT FIDNK LN R +
Sbjct: 481 LNLTDDDVPEEPLPQNSILHAIERLLIYIAWNEHYDFRISKNPVDLTPFIDNKLLNERGN 540
Query: 540 LQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGKS 582
P+TFVDFN +GGIKGA KYIFIGPARA+KYILKR L K KS
Sbjct: 541 SAPNTFVDFNYMGGIKGAFKYIFIGPARAVKYILKRSLQKIKS 583
>gi|94988294|ref|YP_596395.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
pyogenes MGAS9429]
gi|94992170|ref|YP_600269.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
MGAS2096]
gi|94541802|gb|ABF31851.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
pyogenes MGAS9429]
gi|94545678|gb|ABF35725.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
MGAS2096]
Length = 581
Score = 733 bits (1892), Expect = 0.0, Method: Composition-based stats.
Identities = 363/582 (62%), Positives = 456/582 (78%), Gaps = 2/582 (0%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKE-LVDEVL 59
M R+LLYVHFNK+N+IS HV YQLE+MR LF K++FISNSK+S + LK L+DE L
Sbjct: 1 MNRILLYVHFNKYNKISAHVYYQLEQMRSLFSKIVFISNSKVSHEDLKRLKNHCLIDEFL 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
RKN GFDF+AW DG+ +GF++L+++DS+T+MNDTCFGP+W++ +++FE VDFW
Sbjct: 61 QRKNKGFDFSAWHDGLITMGFDKLEEFDSLTIMNDTCFGPIWEMAPYFENFEEKETVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
G+TN R K F EH+QSY+++FK V+ ++ FQ FWQ+I ++ VQ+VI HYETQ+T+ L
Sbjct: 121 GITNNRGTKAFKEHVQSYFMTFKNQVIQNKVFQQFWQSIIEYENVQEVIQHYETQLTSIL 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
+ GF YQTVF+T +A++S M +PDFSYYNPT+ILK+ VPFIKVK I AN+ + PY+LN
Sbjct: 181 LNEGFSYQTVFDTRKAESSFMPHPDFSYYNPTAILKHHVPFIKVKAIDANQHIAPYLLNL 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
I TT+YP+DLIV HMS+I LPD YLL +K L+ +K+AVHLHVFYVDLL E
Sbjct: 241 IRETTNYPIDLIVSHMSQISLPDAKYLLSQKYLNCQRLAKQTCQKVAVHLHVFYVDLLDE 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
FL AFE ++F YDLFITTDS+ K+ EI IL+ K A++ VTGN GRD+ PML LK L
Sbjct: 301 FLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVTGNRGRDIYPMLLLKDKL 360
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
SQYDYIGHFHTKKSKEAD+WAGESWRKELI+MLV PAD I+S +D +G++IADIPSF
Sbjct: 361 SQYDYIGHFHTKKSKEADFWAGESWRKELIDMLVKPADSILSAFETND-IGIIIADIPSF 419
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
FRFN+IV AWNE LI+ EM LW +M+ +K++DF+ M+TFVMSYGTFVWFKYDAL LFD
Sbjct: 420 FRFNKIVNAWNEHLIAQEMMSLWRKMDVKKQIDFQAMDTFVMSYGTFVWFKYDALKSLFD 479
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNRED 539
L +T+ D+PSEPLPQNSILHAIERLLVYIAW YDF+I N LT FIDNK LN RED
Sbjct: 480 LELTQNDIPSEPLPQNSILHAIERLLVYIAWGNSYDFRIVKNPYELTPFIDNKLLNLRED 539
Query: 540 LQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGK 581
HT+V+FNQ+GGIKGA+KYI +GPA+A+KYI RL+ K K
Sbjct: 540 EGAHTYVNFNQMGGIKGALKYIIVGPAKAMKYIFLRLMEKLK 581
>gi|21910063|ref|NP_664331.1| hypothetical protein SpyM3_0527 [Streptococcus pyogenes MGAS315]
gi|28896239|ref|NP_802589.1| hypothetical protein SPs1327 [Streptococcus pyogenes SSI-1]
gi|21904254|gb|AAM79134.1| putative protein [Streptococcus pyogenes MGAS315]
gi|28811490|dbj|BAC64422.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
Length = 581
Score = 733 bits (1892), Expect = 0.0, Method: Composition-based stats.
Identities = 363/582 (62%), Positives = 456/582 (78%), Gaps = 2/582 (0%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKE-LVDEVL 59
M R+LLYVHFNK+N+IS HV YQLE+MR LF K++FISNSK+S + LK L+DE L
Sbjct: 1 MNRILLYVHFNKYNKISAHVYYQLEQMRSLFSKIVFISNSKVSHEDLKRLKNHCLIDEFL 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
RKN GFDF+AW DG+ +GF++L+++DS+T+MNDTCFGP+W++ +++FE VDFW
Sbjct: 61 QRKNKGFDFSAWHDGLITMGFDKLEEFDSLTIMNDTCFGPIWEMAPYFENFEEKEAVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
G+TN R K F EH+QSY+++FK V+ ++ FQ FWQ+I ++ VQ+VI HYETQ+T+ L
Sbjct: 121 GITNNRGTKAFKEHVQSYFMTFKNQVIQNKVFQQFWQSIIEYENVQEVIQHYETQLTSIL 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
+ GF YQTVF+T +A++S M +PDFSYYNPT+ILK+ VPFIKVK I AN+ + PY+LN
Sbjct: 181 LNEGFSYQTVFDTRKAESSFMPHPDFSYYNPTAILKHHVPFIKVKAIDANQHIAPYLLNL 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
I TT+YP+DLIV HMS+I LPD YLL +K L+ +K+AVHLHVFYVDLL E
Sbjct: 241 IRETTNYPIDLIVSHMSQISLPDAKYLLSQKYLNCQRLAKQTCQKVAVHLHVFYVDLLDE 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
FL AFE ++F YDLFITTDS+ K+ EI IL+ K A++ VTGN GRD+ PML LK L
Sbjct: 301 FLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVTGNRGRDIYPMLLLKDKL 360
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
SQYDYIGHFHTKKSKEAD+WAGESWRKELI+MLV PAD I+S +D +G++IADIPSF
Sbjct: 361 SQYDYIGHFHTKKSKEADFWAGESWRKELIDMLVKPADSILSAFETND-IGIIIADIPSF 419
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
FRFN+IV AWNE LI+ EM LW +M+ +K++DF+ M+TFVMSYGTFVWFKYDAL LFD
Sbjct: 420 FRFNKIVNAWNEHLIAQEMMSLWRKMDVKKQIDFQAMDTFVMSYGTFVWFKYDALKSLFD 479
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNRED 539
L +T+ D+PSEPLPQNSILHAIERLLVYIAW YDF+I N LT FIDNK LN RED
Sbjct: 480 LELTQNDIPSEPLPQNSILHAIERLLVYIAWGNSYDFRIVKNPYELTPFIDNKLLNLRED 539
Query: 540 LQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGK 581
HT+V+FNQ+GGIKGA+KYI +GPA+A+KYI RL+ K K
Sbjct: 540 EGAHTYVNFNQMGGIKGALKYIIVGPAKAMKYIFLRLMEKLK 581
>gi|94990172|ref|YP_598272.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
MGAS10270]
gi|94543680|gb|ABF33728.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
MGAS10270]
Length = 581
Score = 732 bits (1890), Expect = 0.0, Method: Composition-based stats.
Identities = 363/582 (62%), Positives = 456/582 (78%), Gaps = 2/582 (0%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKE-LVDEVL 59
M R+LLYVHFNK+N+IS HV YQLE+MR LF K++FISNSK+S + LK L+DE L
Sbjct: 1 MNRILLYVHFNKYNKISAHVYYQLEQMRSLFSKIVFISNSKVSHEDLKRLKNHCLIDEFL 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
RKN GFDF+AW DG+ +GF++L+++DS+T+MNDTCFGP+W++ +++FE VDFW
Sbjct: 61 QRKNKGFDFSAWHDGLITMGFDKLEEFDSLTIMNDTCFGPIWEMGPYFENFEEKEAVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
G+TN R K F EH+QSY+++FK V+ ++ FQ FWQ+I ++ VQ+VI HYETQ+T+ L
Sbjct: 121 GITNNRGTKAFKEHVQSYFMTFKNQVIQNKVFQQFWQSIIEYENVQEVIQHYETQLTSIL 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
+ GF YQTVF+T +A++S M +PDFSYYNPT+ILK+ VPFIKVK I AN+ + PY+LN
Sbjct: 181 LNEGFSYQTVFDTRKAESSFMPHPDFSYYNPTAILKHHVPFIKVKAIDANQHIAPYLLNL 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
I TT+YP+DLIV HMS+I LPD YLL +K L+ +K+AVHLHVFYVDLL E
Sbjct: 241 IRETTNYPIDLIVSHMSQISLPDAKYLLSQKYLNCQRLAKQTCQKVAVHLHVFYVDLLDE 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
FL AFE ++F YDLFITTDS+ K+ EI IL+ K A++ VTGN GRD+ PML LK L
Sbjct: 301 FLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVTGNRGRDIYPMLLLKDKL 360
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
SQYDYIGHFHTKKSKEAD+WAGESWRKELI+MLV PAD I+S +D +G++IADIPSF
Sbjct: 361 SQYDYIGHFHTKKSKEADFWAGESWRKELIDMLVKPADSILSAFETND-IGIIIADIPSF 419
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
FRFN+IV AWNE LI+ EM LW +M+ +K++DF+ M+TFVMSYGTFVWFKYDAL LFD
Sbjct: 420 FRFNKIVNAWNEHLIAQEMMSLWRKMDVKKQIDFQAMDTFVMSYGTFVWFKYDALKSLFD 479
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNRED 539
L +T+ D+PSEPLPQNSILHAIERLLVYIAW YDF+I N LT FIDNK LN RED
Sbjct: 480 LELTQNDIPSEPLPQNSILHAIERLLVYIAWGNSYDFRIVKNPYELTPFIDNKLLNLRED 539
Query: 540 LQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGK 581
HT+V+FNQ+GGIKGA+KYI +GPA+A+KYI RL+ K K
Sbjct: 540 EGAHTYVNFNQMGGIKGALKYIIVGPAKAMKYIFLRLMEKLK 581
>gi|50913971|ref|YP_059943.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
pyogenes MGAS10394]
gi|50903045|gb|AAT86760.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase; alpha-L-Rha
alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
MGAS10394]
Length = 581
Score = 730 bits (1885), Expect = 0.0, Method: Composition-based stats.
Identities = 362/582 (62%), Positives = 455/582 (78%), Gaps = 2/582 (0%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKE-LVDEVL 59
M R+LLYVHFNK+N+IS HV YQLE+MR LF K++FISNSK+S + LK L+DE L
Sbjct: 1 MNRILLYVHFNKYNKISAHVYYQLEQMRSLFSKIVFISNSKVSHEDLKRLKNHCLIDEFL 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
RKN GFDF+AW DG+ +GF++L+++DS+T+MNDTCFGP+W++ +++FE VDFW
Sbjct: 61 QRKNKGFDFSAWHDGLITMGFDKLEEFDSLTIMNDTCFGPIWEMAPYFENFEEKEAVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
G+TN R K F EH+QSY+++FK V+ ++ FQ FWQ+I ++ VQ+VI HYETQ+T+ L
Sbjct: 121 GITNNRGTKAFKEHVQSYFMTFKNQVIQNKVFQQFWQSIIEYENVQEVIQHYETQLTSIL 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
+ GF YQTVF+T +A++S M +PDFSYYNPT+ILK+ VPFIKVK I AN+ + PY+LN
Sbjct: 181 LNEGFSYQTVFDTRKAESSFMPHPDFSYYNPTAILKHHVPFIKVKAIDANQHIAPYLLNL 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
I T +YP+DLIV HMS+I LPD YLL +K L+ +K+AVHLHVFYVDLL E
Sbjct: 241 IRETINYPIDLIVSHMSQISLPDAKYLLSQKYLNCQRLAKQTCQKVAVHLHVFYVDLLDE 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
FL AFE ++F YDLFITTDS+ K+ EI IL+ K A++ VTGN GRD+ PML LK L
Sbjct: 301 FLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVTGNRGRDIYPMLLLKDKL 360
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
SQYDYIGHFHTKKSKEAD+WAGESWRKELI+MLV PAD I+S +D +G++IADIPSF
Sbjct: 361 SQYDYIGHFHTKKSKEADFWAGESWRKELIDMLVKPADSILSAFETND-IGIIIADIPSF 419
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
FRFN+IV AWNE LI+ EM LW +M+ +K++DF+ M+TFVMSYGTFVWFKYDAL LFD
Sbjct: 420 FRFNKIVNAWNEHLIAQEMMSLWRKMDVKKQIDFQAMDTFVMSYGTFVWFKYDALKSLFD 479
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNRED 539
L +T+ D+PSEPLPQNSILHAIERLLVYIAW YDF+I N LT FIDNK LN RED
Sbjct: 480 LELTQNDIPSEPLPQNSILHAIERLLVYIAWGNSYDFRIVKNPYELTPFIDNKLLNLRED 539
Query: 540 LQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGK 581
HT+V+FNQ+GGIKGA+KYI +GPA+A+KYI RL+ K K
Sbjct: 540 EGAHTYVNFNQMGGIKGALKYIIVGPAKAMKYIFLRLMEKLK 581
>gi|19745874|ref|NP_607010.1| hypothetical protein spyM18_0853 [Streptococcus pyogenes MGAS8232]
gi|19748025|gb|AAL97509.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
Length = 581
Score = 715 bits (1846), Expect = 0.0, Method: Composition-based stats.
Identities = 363/582 (62%), Positives = 457/582 (78%), Gaps = 2/582 (0%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKE-LVDEVL 59
M R+LLYVHFNK+N+IS HV YQLE+MR LF K++FISNSK+S + LK L+DE L
Sbjct: 1 MNRILLYVHFNKYNKISAHVYYQLEQMRSLFSKIVFISNSKVSHEDLKRLKNHCLIDEFL 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
RKN GFDF+AW DG+ +GF++L+++DS+T+MNDTCFGP+W++ +++FE + VDFW
Sbjct: 61 QRKNKGFDFSAWHDGLITMGFDKLEEFDSLTIMNDTCFGPIWEMAPYFENFEEKKAVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
G+TN R K F EH+QSY+++FK V+ ++ FQ FWQ+I ++ VQ+VI HYETQ+T+ L
Sbjct: 121 GITNNRGTKAFKEHVQSYFMTFKNQVIQNKVFQQFWQSIIEYENVQEVIQHYETQLTSIL 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
+ GF YQTVF+T +A++S M +PDFSYYNPT+ILK+ VPFIKVK I AN+ + PY+LN
Sbjct: 181 LNEGFSYQTVFDTRKAESSFMPHPDFSYYNPTAILKHHVPFIKVKAIDANQHIAPYLLNL 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
I TT+YP+DLIV HMS+I LPD YLL +K L+ +K+AVHLHVFYVDLL E
Sbjct: 241 IRETTNYPIDLIVSHMSQISLPDAKYLLSQKYLNCQRLAKQTCQKVAVHLHVFYVDLLDE 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
FL AFE ++F YDLFITTDS+ K+ EI IL+ K A++ VTGN GRD+ PML LK L
Sbjct: 301 FLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVTGNRGRDIYPMLLLKDKL 360
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
SQYDYIGHFHTKKSKEAD+WAGESWRKELI+MLV PAD I+S + D +G++IADIPSF
Sbjct: 361 SQYDYIGHFHTKKSKEADFWAGESWRKELIDMLVKPADSILSAF-ETDDIGIIIADIPSF 419
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
FRFN+IV AWNE LI+ EM LW +M+ +K++DF+ M+TFVMSYGTFVWFKYDAL LFD
Sbjct: 420 FRFNKIVNAWNEHLIAQEMMSLWRKMDVKKQIDFQAMDTFVMSYGTFVWFKYDALKSLFD 479
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNRED 539
L +T+ D+PSEPLPQNSILHAIERLLVYIAW YDF+I N LT FIDNK LN RED
Sbjct: 480 LELTQNDIPSEPLPQNSILHAIERLLVYIAWGNSYDFRIVKNPYELTPFIDNKLLNLRED 539
Query: 540 LQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGK 581
HT+V+FNQ+GGIKGA+KYI +GPA+A+KYI RL+ K K
Sbjct: 540 EGAHTYVNFNQMGGIKGALKYIIVGPAKAMKYIFLRLMEKLK 581
>gi|139474025|ref|YP_001128741.1| rhamnan synthesis protein F family protein [Streptococcus pyogenes
str. Manfredo]
gi|134272272|emb|CAM30524.1| rhamnan synthesis protein F family protein [Streptococcus pyogenes
str. Manfredo]
Length = 581
Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats.
Identities = 363/582 (62%), Positives = 456/582 (78%), Gaps = 2/582 (0%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKE-LVDEVL 59
M R+LLYVHFNK+N+IS HV YQLE+MR LF K++FISNSK+S + LK L+DE L
Sbjct: 1 MNRILLYVHFNKYNKISAHVYYQLEQMRSLFSKIVFISNSKVSHEDLKRLKNHCLIDEFL 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
RKN GFDF+AW DG+ +GF++L+++DS+T+MNDTCFGP+W++ +++FE VDFW
Sbjct: 61 QRKNKGFDFSAWHDGLITMGFDKLEEFDSLTIMNDTCFGPIWEMAPYFENFEEKEAVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
G+TN R K F EH+QSY+++FK V+ ++ FQ FWQ+I ++ VQ+VI HYETQ+T+ L
Sbjct: 121 GITNNRGTKAFKEHVQSYFMTFKNQVIQNKVFQQFWQSIIEYENVQEVIQHYETQLTSIL 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
+ GF YQTVF+T +A++S M +PDFSYYNPT+ILK+ VPFIKVK I AN+ + PY+LN
Sbjct: 181 LNEGFSYQTVFDTRKAESSFMPHPDFSYYNPTAILKHHVPFIKVKAIDANQHIAPYLLNL 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
I TT+YP+DLIV HMS+I LPD YLL +K L+ +K+AVHLHVFYVDLL E
Sbjct: 241 IRETTNYPIDLIVSHMSQISLPDAKYLLSQKYLNCQRLAKKTCQKVAVHLHVFYVDLLDE 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
FL AFE ++F YDLFITTDS+ K+ EI IL+ K A++ VTGN GRD+ PML LK L
Sbjct: 301 FLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVTGNRGRDIYPMLLLKDKL 360
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
SQYDYIGHFHTKKSKEAD+WAGESWRKELI+MLV PAD I+S + D +G++IADIPSF
Sbjct: 361 SQYDYIGHFHTKKSKEADFWAGESWRKELIDMLVKPADSILSAF-ETDDIGIIIADIPSF 419
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
FRFN+IV AWNE LI+ EM LW +M+ +K++DF+ M+TFVMSYGTFVWFKYDAL LFD
Sbjct: 420 FRFNKIVNAWNEHLIAQEMMSLWRKMDVKKQIDFQAMDTFVMSYGTFVWFKYDALKSLFD 479
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNRED 539
L +T+ D+PSEPLPQNSILHAIERLLVYIAW YDF+I N LT FIDNK LN RED
Sbjct: 480 LELTQNDIPSEPLPQNSILHAIERLLVYIAWGNSYDFRIVKNPYELTPFIDNKLLNLRED 539
Query: 540 LQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGK 581
HT+V+FNQ+GGIKGA+KYI +GPA+A+KYI RL+ K K
Sbjct: 540 EGAHTYVNFNQMGGIKGALKYIIVGPAKAMKYIFLRLMEKLK 581
>gi|15674835|ref|NP_269009.1| conserved hypothetical protein - possibly involved in cell wall
localization and side chain formation of
rhamnose-glucose polysaccharide [Streptococcus pyogenes
M1 GAS]
gi|71910421|ref|YP_281971.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
MGAS5005]
gi|13621968|gb|AAK33730.1| conserved hypothetical protein - possibly involved in cell wall
localization and side chain formation of
rhamnose-glucose polysaccharide [Streptococcus pyogenes
M1 GAS]
gi|71853203|gb|AAZ51226.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha
alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
MGAS5005]
Length = 581
Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats.
Identities = 363/582 (62%), Positives = 457/582 (78%), Gaps = 2/582 (0%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKE-LVDEVL 59
M R+LLYVHFNK+N+IS HV YQLE+MR LF K++FISNSK+S + LK L+DE L
Sbjct: 1 MNRILLYVHFNKYNKISAHVYYQLEQMRSLFSKIVFISNSKVSHEDLKRLKNHCLIDEFL 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
RKN GFDF+AW DG+ +GF++L+++DS+T+MNDTCFGP+W++ +++FE VDFW
Sbjct: 61 QRKNKGFDFSAWHDGLIIMGFDKLEEFDSLTIMNDTCFGPIWEMAPYFENFEEKETVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
G+TN R K F EH+QSY+++FK V+ ++ FQ FWQ+I ++ VQ+VI HYETQ+T+ L
Sbjct: 121 GITNNRGTKAFKEHVQSYFMTFKNQVIQNKVFQQFWQSIIEYENVQEVIQHYETQLTSIL 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
+ GF YQTVF+T +A++S M +PDFSYYNPT+ILK+ VPFIKVK I AN+ + PY+LN
Sbjct: 181 LNEGFSYQTVFDTRKAESSFMPHPDFSYYNPTAILKHHVPFIKVKAIDANQHIAPYLLNL 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
I TT+YP+DLIV HMS+I LPD YLL +K L+ +K+AVHLHVFYVDLL E
Sbjct: 241 IRETTNYPIDLIVSHMSQISLPDTKYLLSQKYLNCQRLAKQTCQKVAVHLHVFYVDLLDE 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
FL AFE+++F YDLFITTDS+ K+ EI IL+ K A++ VTGN GRD+ PML LK L
Sbjct: 301 FLTAFENWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVTGNRGRDIYPMLLLKDKL 360
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
SQYDYIGHFHTKKSKEAD+WAGESWRKELI+MLV PAD I+S + D +G++IADIPSF
Sbjct: 361 SQYDYIGHFHTKKSKEADFWAGESWRKELIDMLVKPADSILSAF-ETDDIGIIIADIPSF 419
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
FRFN+IV AWNE LI+ EM LW +M+ +K++DF+ M+TFVMSYGTFVWFKYDAL LFD
Sbjct: 420 FRFNKIVNAWNEHLIAQEMMSLWRKMDVKKQIDFQAMDTFVMSYGTFVWFKYDALKSLFD 479
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNRED 539
L +T+ D+PSEPLPQNSILHAIERLLVYIAW YDF+I N LT FIDNK LN RED
Sbjct: 480 LELTQNDIPSEPLPQNSILHAIERLLVYIAWGDSYDFRIVKNPYELTPFIDNKLLNLRED 539
Query: 540 LQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGK 581
HT+V+FNQ+GGIKGA+KYI +GPA+A+KYI RL+ K K
Sbjct: 540 EGAHTYVNFNQMGGIKGALKYIIVGPAKAMKYIFLRLMEKLK 581
>gi|94994091|ref|YP_602189.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
MGAS10750]
gi|94547599|gb|ABF37645.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha
alpha-1,3-L-rhamnosyltransferase [Streptococcus pyogenes
MGAS10750]
Length = 581
Score = 712 bits (1837), Expect = 0.0, Method: Composition-based stats.
Identities = 362/582 (62%), Positives = 455/582 (78%), Gaps = 2/582 (0%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKE-LVDEVL 59
M R+LLYVHFNK+N+IS HV YQLE+MR LF K++FISNSK+S + LK L+DE L
Sbjct: 1 MNRILLYVHFNKYNKISAHVYYQLEQMRSLFSKIVFISNSKVSHEDLKRLKNHCLIDEFL 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
RKN GFDF+AW DG+ +GF++L+++DS+T+MNDTCFGP+W++ +++FE VDFW
Sbjct: 61 QRKNKGFDFSAWHDGLITMGFDKLEEFDSLTIMNDTCFGPIWEMAPYFENFEEKETVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
G+TN R K F EH+QSY+++FK V+ ++ FQ FWQ+I ++ VQ+VI HYETQ+T+ L
Sbjct: 121 GITNNRGTKAFKEHVQSYFMTFKNQVIQNKVFQQFWQSIIEYENVQEVIQHYETQLTSIL 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
+ GF YQTVF+T +A++S M +PDFSYYNPT+ILK+ VPFIKVK I AN+ + PY+LN
Sbjct: 181 LNEGFSYQTVFDTRKAESSFMPHPDFSYYNPTAILKHHVPFIKVKAIDANQHIAPYLLNL 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
I TT+YP+DLIV HMS+I LPD YLL +K L+ +K+AVHLHVFYVDLL E
Sbjct: 241 IRETTNYPIDLIVSHMSQISLPDAKYLLSQKYLNCQRLAKKTCQKVAVHLHVFYVDLLDE 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
FL AFE ++F YDLFITTDS+ K+ EI IL+ K A++ VTGN GRD+ PML LK L
Sbjct: 301 FLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVTGNRGRDIYPMLLLKDKL 360
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
SQYDYIGHFHTKKSKEAD+WAGESWRKELI+MLV PAD I+S + D +G++IADIPSF
Sbjct: 361 SQYDYIGHFHTKKSKEADFWAGESWRKELIDMLVKPADSILSVF-ETDDIGIIIADIPSF 419
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
FRFN+IV AWNE LI+ EM LW +M+ +K++DF+ M+TFVMSYGTFVWFKYDAL LFD
Sbjct: 420 FRFNKIVNAWNEHLIAQEMMSLWRKMDVKKQIDFQAMDTFVMSYGTFVWFKYDALKSLFD 479
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNRED 539
L +T+ D+PSEPLPQNSILHAIERL VYIAW YDF+I N LT FIDNK LN RED
Sbjct: 480 LELTQNDIPSEPLPQNSILHAIERLFVYIAWGNSYDFRIVKNPYELTPFIDNKLLNLRED 539
Query: 540 LQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGK 581
HT+V+FNQ+GGIKGA+KYI +GPA+A+KYI RL+ K K
Sbjct: 540 EGAHTYVNFNQMGGIKGALKYIIVGPAKAMKYIFLRLMEKLK 581
>gi|71903253|ref|YP_280056.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
pyogenes MGAS6180]
gi|71802348|gb|AAX71701.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase [Streptococcus
pyogenes MGAS6180]
Length = 581
Score = 711 bits (1835), Expect = 0.0, Method: Composition-based stats.
Identities = 362/582 (62%), Positives = 455/582 (78%), Gaps = 2/582 (0%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKE-LVDEVL 59
M R+LLYVHFNK+N+IS HV YQLE+MR LF K++FISNSK+S + LK L+DE L
Sbjct: 1 MNRILLYVHFNKYNKISAHVYYQLEQMRSLFSKIVFISNSKVSHEDLKRLKNHCLIDEFL 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
RKN GFDF+AW DG+ +GF++L+++DS+T+MNDTCFGP+W++ +++FE VDFW
Sbjct: 61 QRKNKGFDFSAWHDGLITMGFDKLEEFDSLTIMNDTCFGPIWEMGPYFENFEEKEAVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
G+TN R K F EH+QSY+++FK V+ ++ FQ FWQ+I ++ VQ+VI HYETQ+T+ L
Sbjct: 121 GITNNRGTKAFKEHVQSYFMTFKNQVIQNKVFQQFWQSIIEYENVQEVIQHYETQLTSIL 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
+ GF YQTVF+T +A++S M +PDFSYYNPT+ILK+ VPFIKVK I AN+ + PY+LN
Sbjct: 181 LNEGFSYQTVFDTRKAESSFMPHPDFSYYNPTAILKHHVPFIKVKAIDANQHIAPYLLNL 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
I TT+YP+DLIV HMS+I LPD YLL +K L+ +K+AVHLHVFYVDLL E
Sbjct: 241 IRETTNYPIDLIVSHMSQISLPDAKYLLSQKYLNCQRLAKQTCQKVAVHLHVFYVDLLDE 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
FL AFE ++F YDLFITTDS+ K+ EI IL+ K A++ VTGN GRD+ PML LK L
Sbjct: 301 FLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVTGNRGRDIYPMLLLKDKL 360
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
SQYDYIGHFHTKKSKEAD+WAGESWRKELI+MLV PAD I+S + D +G++IADIPSF
Sbjct: 361 SQYDYIGHFHTKKSKEADFWAGESWRKELIDMLVKPADSILSVF-ETDDIGIIIADIPSF 419
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
FRFN+IV AWNE LI+ EM LW +M+ +K++DF+ M+TFVMSYGTFVWFKYDAL LFD
Sbjct: 420 FRFNKIVNAWNEHLIAQEMMSLWRKMDVKKQIDFQAMDTFVMSYGTFVWFKYDALKSLFD 479
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNRED 539
L +T+ D+PSEPLPQNSILHAIERL VYIAW YDF+I N LT FIDNK LN RED
Sbjct: 480 LELTQNDIPSEPLPQNSILHAIERLFVYIAWGNSYDFRIVKNPYELTPFIDNKLLNLRED 539
Query: 540 LQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGK 581
HT+V+FNQ+GGIKGA+KYI +GPA+A+KYI RL+ K K
Sbjct: 540 EGAHTYVNFNQMGGIKGALKYIIVGPAKAMKYIFLRLMEKLK 581
>gi|56808559|ref|ZP_00366292.1| COG3754: Lipopolysaccharide biosynthesis protein [Streptococcus
pyogenes M49 591]
Length = 581
Score = 711 bits (1834), Expect = 0.0, Method: Composition-based stats.
Identities = 361/582 (62%), Positives = 455/582 (78%), Gaps = 2/582 (0%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKE-LVDEVL 59
M R+LLYVHFNK+N+IS HV YQLE+MR LF K++FISNSK+S + LK L+DE L
Sbjct: 1 MNRILLYVHFNKYNKISAHVYYQLEQMRSLFSKIVFISNSKVSHEDLKRLKNHCLIDEFL 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
RKN GFDF+AW DG+ +GF++L+++DS+T+MNDTCFGP+W++ +++FE VDFW
Sbjct: 61 QRKNKGFDFSAWHDGLITMGFDKLEEFDSLTIMNDTCFGPIWEMAPYFENFEEKETVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
G+TN + K F EH+QSY+++FK V+ ++ FQ FWQ+I ++ VQ+VI HYETQ+T+ L
Sbjct: 121 GITNNKGTKAFKEHVQSYFMTFKNQVIQNKVFQQFWQSIIEYENVQEVIQHYETQLTSIL 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
+ GF YQTVF+T + ++S M +PDFSYYNPT+ILK+ VPFIKVK I AN+ + PY+LN
Sbjct: 181 LNEGFSYQTVFDTRKVESSFMPHPDFSYYNPTAILKHHVPFIKVKAIDANQHIAPYLLNL 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
I TT+YP+DLIV HMS+I LPD YLL +K L+ +K+AVHLHVFYVDLL E
Sbjct: 241 IRETTNYPIDLIVSHMSQISLPDAKYLLSQKYLNCQRLAKKTCQKVAVHLHVFYVDLLDE 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
FL AFE ++F YDLFITTDS+ K+ EI IL+ K A++ VTGN GRD+ PML LK L
Sbjct: 301 FLTAFEDWNFHYDLFITTDSDIKRKEIKEILQRKGKTADIRVTGNRGRDIYPMLLLKDKL 360
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
SQYDYIGHFHTKKSKEAD+WAGESWRKELI+MLV PAD I+S + D +G++IADIPSF
Sbjct: 361 SQYDYIGHFHTKKSKEADFWAGESWRKELIDMLVKPADSILSAF-ETDDIGIIIADIPSF 419
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
FRFN+IV AWNE LI+ EM LW +M+ +K++DF+ M+TFVMSYGTFVWFKYDAL LFD
Sbjct: 420 FRFNKIVNAWNEHLIAQEMMSLWRKMDVKKQIDFQAMDTFVMSYGTFVWFKYDALKSLFD 479
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLNNRED 539
L +T+ D+PSEPLPQNSILHAIERLLVYIAW YDF+I N LT FIDNK LN RED
Sbjct: 480 LELTQNDIPSEPLPQNSILHAIERLLVYIAWGNSYDFRIVKNPYELTPFIDNKLLNLRED 539
Query: 540 LQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLLGKGK 581
HT+V+FNQ+GGIKGA+KYI +GPA+A+KYI RL+ K K
Sbjct: 540 EGAHTYVNFNQMGGIKGALKYIIVGPAKAMKYIFLRLMEKLK 581
>gi|55821450|ref|YP_139892.1| polysaccharide biosynthesis protein [Streptococcus thermophilus LMG
18311]
gi|55737435|gb|AAV61077.1| polysaccharide biosynthesis protein [Streptococcus thermophilus LMG
18311]
Length = 594
Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats.
Identities = 328/581 (56%), Positives = 438/581 (75%), Gaps = 6/581 (1%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELK-KELVDEVL 59
M+RLLLYVHFNK++ IS HV YQLE MRPLF K++FISNS++S+ + +L+ K L+D+ +
Sbjct: 1 MKRLLLYVHFNKYDHISRHVFYQLEHMRPLFDKLVFISNSRLSESEVQKLRDKHLIDDFI 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
R+N G+DFAAW DGM+ VGFE LK+YDSVT+MNDTCFGPLWD+ IY ++E + NVDFW
Sbjct: 61 QRENKGYDFAAWHDGMEFVGFENLKQYDSVTVMNDTCFGPLWDMAPIYDNYESNPNVDFW 120
Query: 120 GMTNYRK----DKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQV 175
GMTN++ D +EH+QSY++SFK+ +V S FQ FW++++ F +VQ VID+YET
Sbjct: 121 GMTNHQGIKAGDIYIHEHLQSYFISFKKRLVESSVFQKFWKSVESFEDVQKVIDNYETLY 180
Query: 176 TTNLVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPY 235
T AGF+Y+++ NTI + + +F+ + P +L VPFIKVKT + L PY
Sbjct: 181 TKKFRDAGFNYESILNTIPLN-DKFFHSNFTIHYPHVLLDTGVPFIKVKTFDLTQHLAPY 239
Query: 236 ILNDIENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVD 295
+L +IE TDYPV+LI+ HMS + LP PYLL RK+++ S KKIAVHLH +YVD
Sbjct: 240 LLKEIEKRTDYPVELILSHMSDMSLPTPPYLLDRKVIEKSSQTYSDTKKIAVHLHTYYVD 299
Query: 296 LLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKL 355
LL +FL FE+FHF+YDLF+TTDSE KK EI IL+ A +F+TGN GRDV+PMLKL
Sbjct: 300 LLEDFLKQFENFHFTYDLFLTTDSEDKKAEIQSILDKNGKVARIFITGNRGRDVIPMLKL 359
Query: 356 KRHLSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIAD 415
K LS YDYIGHFHTKKS E YW G+SWR EL +ML+ PAD I++ L +DD LGLVIAD
Sbjct: 360 KDELSAYDYIGHFHTKKSPEYPYWVGDSWRNELFSMLIQPADNIIANLERDDRLGLVIAD 419
Query: 416 IPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALS 475
IPSFFR+ +IV WNE + MN LWERM+ +++DF +MNTF+MSYGTF+WFKYDAL
Sbjct: 420 IPSFFRYTKIVDPWNENRFAEGMNDLWERMDLGRDIDFDKMNTFIMSYGTFIWFKYDALK 479
Query: 476 PLFDLNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNKQLN 535
PLFDL++ +E++P+EP+PQ++ILH+IER+LVY+AW ++YD+ I+ N + +T F+DN LN
Sbjct: 480 PLFDLDLQDEEIPAEPIPQHTILHSIERILVYLAWARRYDYAIAKNDIYITPFVDNVVLN 539
Query: 536 NREDLQPHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRL 576
R D P+T+++F+ IGGIKGA+KYI +GP A+KYI +R+
Sbjct: 540 IRPDTLPNTYINFDNIGGIKGALKYIIVGPGTAVKYIFRRI 580
>gi|15672189|ref|NP_266363.1| polysaccharide biosynthesis protein [Lactococcus lactis subsp.
lactis Il1403]
gi|12723062|gb|AAK04305.1|AE006258_8 polysaccharide biosynthesis protein [Lactococcus lactis subsp.
lactis Il1403]
Length = 589
Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats.
Identities = 301/555 (54%), Positives = 408/555 (73%), Gaps = 11/555 (1%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLL 60
M+RLLLYVHFNK N++S+HV+YQL+ MR LF KVIFISNS++S+ + +L + VDE +
Sbjct: 1 MKRLLLYVHFNKNNKVSDHVIYQLKHMRSLFEKVIFISNSELSEQYQQQLV-DFVDEFIQ 59
Query: 61 RKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWG 120
R+N GFDFAAWRDGM++VGF++LK YDSVTLMNDTCFGPL+++ IY+ +E+ +N+DFWG
Sbjct: 60 RENKGFDFAAWRDGMEQVGFDQLKMYDSVTLMNDTCFGPLYEMAPIYEKYEI-QNIDFWG 118
Query: 121 MTNYR-----KDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQV 175
+TN+R K+ F+EHIQSYY F NV+NS+ F+ FW+NI D+T VQDVIDHYE Q
Sbjct: 119 ITNHRAYHESKNHYFDEHIQSYYKVFNNNVINSQIFEDFWKNIVDYTNVQDVIDHYEIQS 178
Query: 176 TTNLVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAA--NEGLT 233
T + AGF Y++V +T DA +L+PDFSYY P ILK +VPFIKVK + + G+
Sbjct: 179 TKIFMDAGFKYESVLDTRALDAKNLLHPDFSYYAPDVILKEKVPFIKVKAFQSIQSNGIA 238
Query: 234 PYILNDIENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFY 293
Y+L+ I+ TDYP L+V H+S + PD +LL K++ L ++ + +AVHLHV+Y
Sbjct: 239 YYMLDYIDRNTDYPKSLVVDHLSTVGYPDLNFLLPSKMIT-PLSKTVLHQTVAVHLHVYY 297
Query: 294 VDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPML 353
+LL EFL AF++F F YDL++TT++++K+ I +L+ K AKA++ T N GRD++P L
Sbjct: 298 PELLEEFLDAFKNFSFDYDLYLTTNTDEKEEIIKEMLKCKDAKAKLVRTPNHGRDIVPFL 357
Query: 354 KLKRHLSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVI 413
LK L +YD +GHFHTK+S EA ++AGESWR ELI+ML+ PAD I++ Q LG+VI
Sbjct: 358 ALKEELKKYDIVGHFHTKRSLEAAFFAGESWRTELISMLIEPADNIMAHFEQKQKLGIVI 417
Query: 414 ADIPSFFRFNRIVVAWNE-ALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYD 472
ADIPSFFRFN+IV A NE I+P MN +W+RM K+V+F NTF MSYGTF W K +
Sbjct: 418 ADIPSFFRFNKIVNADNENKQIAPIMNDIWKRMKMNKKVNFHDFNTFTMSYGTFFWAKIE 477
Query: 473 ALSPLFDLNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDNK 532
L PLF+L + + ++P+EPLPQN+ILHAIER+L+Y+AWDK+ DF IS N+L LT FID++
Sbjct: 478 VLEPLFNLEIMDREIPNEPLPQNTILHAIERVLIYLAWDKEMDFNISPNKLNLTPFIDSR 537
Query: 533 QLNNREDLQPHTFVD 547
LN R + P D
Sbjct: 538 TLNQRFYISPENSDD 552
>gi|116511036|ref|YP_808252.1| Lipopolysaccharide biosynthesis protein [Lactococcus lactis subsp.
cremoris SK11]
gi|116106690|gb|ABJ71830.1| Lipopolysaccharide biosynthesis protein [Lactococcus lactis subsp.
cremoris SK11]
Length = 588
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 243/547 (44%), Positives = 351/547 (64%), Gaps = 17/547 (3%)
Query: 3 RLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELK-KELVDEVLLR 61
+LLLYVHFN+ N++S+HV+YQL +R F +V FISNS++ ++ L + L+D + R
Sbjct: 4 KLLLYVHFNRNNELSDHVIYQLTHLRQNFEEVFFISNSEMDENDLSTLTGQNLIDGFMQR 63
Query: 62 KNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWGM 121
+N G+DF AW D MK GF++L YDSVT+MNDTCFGP++D E I F+ D +VDFWG+
Sbjct: 64 ENKGYDFVAWSDAMKHYGFDKLASYDSVTVMNDTCFGPVYDFEGILAKFDKDTSVDFWGI 123
Query: 122 TNYRKDK----------DFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHY 171
TN R K +HIQSY++++KQ +V SEAF+ FW NI+ +V +VI Y
Sbjct: 124 TNNRSHKVKPLENREAIVLPDHIQSYFVNYKQKIVKSEAFENFWANIEVLDDVVEVIVKY 183
Query: 172 ETQVTTNLVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIA--AN 229
ET +T AGF VF+T + + SGML DFS +N +LK +PF+K+K + A
Sbjct: 184 ETAMTKYFEDAGFKSGVVFDTRKEEWSGMLVHDFSVFNLPELLKRHIPFLKIKAFSYGAE 243
Query: 230 EGLTPYILNDIENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLP-DKKIAVH 288
TP ++ ++ T +PV LIV HM+ +D PD Y+L K L + +S + KI +H
Sbjct: 244 NIYTPLVIERLKQETSFPVKLIVNHMTEVDYPDREYMLEEKTLKFTKEVSAKTNLKIGIH 303
Query: 289 LHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRD 348
LH FY+DL+ E+L+ F+ + +YDL+ITTD+E+K EIL Q K +V VTGN GRD
Sbjct: 304 LHAFYLDLIPEYLNYFDKYVQNYDLYITTDTEEKYEEILKNYPLPQIK-KVIVTGNKGRD 362
Query: 349 VLPMLKLKRHLSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDC 408
VLP +++ ++ YD GHFHTKKSK+ D+ GESWR+++ L+ PA I + ++
Sbjct: 363 VLPWMQVSELMTDYDLCGHFHTKKSKDNDWIVGESWRRDIEYSLLEPAQAIFQEFEKNPK 422
Query: 409 LGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVW 468
LGL+IAD+PSFF E I P+M ++W++++ + + KQ +++VMSYGT +W
Sbjct: 423 LGLIIADVPSFFEHFYGPTYITERDIWPDMQEIWQKIDFENSKELKQKDSYVMSYGTMIW 482
Query: 469 FKYDALSPLFDLNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAF 528
++ AL+ L ++N+ + DVP EPLP NSILHA ERLLVY++W YDF+IS Q F
Sbjct: 483 YRPQALNNLLNVNI-QADVPEEPLPYNSILHAFERLLVYVSWANGYDFRISQIQTN-NGF 540
Query: 529 IDNKQLN 535
+ N N
Sbjct: 541 VANFSAN 547
>gi|125623094|ref|YP_001031577.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase RgpF [Lactococcus
lactis subsp. cremoris MG1363]
gi|124491902|emb|CAL96823.1| alpha-L-Rha alpha-1,2-L-rhamnosyltransferase RgpF [Lactococcus
lactis subsp. cremoris MG1363]
Length = 588
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 242/547 (44%), Positives = 348/547 (63%), Gaps = 17/547 (3%)
Query: 3 RLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELK-KELVDEVLLR 61
+LLLYVHFN+ N++S+HV+YQL+ +R F +V FISNS + ++ L + L+D + R
Sbjct: 4 KLLLYVHFNRNNELSDHVIYQLKHLRQNFDEVFFISNSLMDENALATLTGQNLIDGFMQR 63
Query: 62 KNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWGM 121
+N G+DF AW + MK GFE+L YDSVT+MNDTCFGP++D E I+ F D NVDFWG+
Sbjct: 64 ENKGYDFVAWSEAMKHYGFEKLASYDSVTIMNDTCFGPVYDFEGIFSKFNKDSNVDFWGI 123
Query: 122 TNYRKDK----------DFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHY 171
TN R K +HIQSY++++KQ +V S+AF+ FW NI+ +V +VI Y
Sbjct: 124 TNNRSHKVKPWEDREAIVLPDHIQSYFVNYKQKIVKSKAFEDFWTNIEVLDDVVEVIVKY 183
Query: 172 ETQVTTNLVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIA--AN 229
ET +T AGF +F+T + + +GML DFS +N +LK +PF+K+K + A+
Sbjct: 184 ETAMTKYFEDAGFKSGVIFDTRKEEWAGMLVHDFSVFNLPELLKRHIPFLKIKAFSYGAD 243
Query: 230 EGLTPYILNDIENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDK-KIAVH 288
TP ++ ++ T YP++LIV HM+ +D PD Y+L K L LS I+ KIA+H
Sbjct: 244 NIYTPLVIERLKQETTYPIELIVNHMTEVDYPDREYMLEEKTLKLSTEINKKSNLKIAIH 303
Query: 289 LHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRD 348
LH FY+DL+ E+L F+ + +YDLFITTD++ K +I+ Q K +V VTGN GRD
Sbjct: 304 LHAFYLDLIPEYLDYFDKYVQNYDLFITTDTKDKYEQIIKSYPLNQIK-KVLVTGNKGRD 362
Query: 349 VLPMLKLKRHLSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDC 408
VLP +++ ++ YD GHFHTKKSK+ D+ GESWR+++ L+ PA I + ++
Sbjct: 363 VLPWMEISELMADYDLCGHFHTKKSKDNDWIVGESWRRDIEYSLLKPAQAIFQEFEKNPK 422
Query: 409 LGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVW 468
LGL+IAD+PSFF E I P+M ++W+++N + KQ +++VMSYGT +W
Sbjct: 423 LGLMIADVPSFFEHFYGPTYITERDIWPDMEEIWKKINFENPRGLKQKDSYVMSYGTMIW 482
Query: 469 FKYDALSPLFDLNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAF 528
++ AL+ L +++ E VP EPLP NSILHA ERLLVY +W YDF+IS Q F
Sbjct: 483 YRPQALNNLLKVDI-EAAVPEEPLPYNSILHAFERLLVYTSWANGYDFRISQIQTN-NGF 540
Query: 529 IDNKQLN 535
+ N N
Sbjct: 541 VANFSAN 547
>gi|125718317|ref|YP_001035450.1| Lipopolysaccharide biosynthesis protein, putative [Streptococcus
sanguinis SK36]
gi|125498234|gb|ABN44900.1| Lipopolysaccharide biosynthesis protein, putative [Streptococcus
sanguinis SK36]
Length = 556
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 221/519 (42%), Positives = 309/519 (59%), Gaps = 10/519 (1%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKEL-VDEVL 59
MER+LLYVHFNK N IS HV YQLE+++PLF K+IFISNS +S + + L+++L + ++L
Sbjct: 1 MERILLYVHFNKCNHISGHVFYQLEQLKPLFSKIIFISNSPLSNEDKCRLREDLGISDLL 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
R N GFDFAAWRDGM +GF+ L+ DS+TLMNDTCFGPLWDL IYQ FE D VDFW
Sbjct: 61 ERDNRGFDFAAWRDGMNWLGFDTLQNSDSLTLMNDTCFGPLWDLAPIYQRFEEDPQVDFW 120
Query: 120 GMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL 179
GMTN+RK + F EH+QSY+++FKQ+V+ ++F+ FW ++DFT+VQDVIDHYETQ T
Sbjct: 121 GMTNFRKTRYFEEHLQSYFVTFKQSVLKDKSFREFWSQVEDFTDVQDVIDHYETQFTKRF 180
Query: 180 VQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPYILND 239
V+AGF YQ++ +T Q +A +++PDFSYY P IL+ ++PF+KVK + N L Y+L D
Sbjct: 181 VEAGFRYQSLLDTRQEEAGELVHPDFSYYKPLRILEAKIPFLKVKALTGNPFLARYLLED 240
Query: 240 IENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVDLLAE 299
+E + YP LI +H+ PD P LL K L + + + +H+HV + +
Sbjct: 241 LETNSSYPTSLIRQHLFYYFGPDLPCLLQDKYLSQATSNYRTVQPVLLHIHVTDFPIFQQ 300
Query: 300 FLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPMLKLKRHL 359
+ S Y +TT+ + ++ L K ++ ++ L ML+ K L
Sbjct: 301 YQDKLFSLSSQYQYLLTTNQPEVLKQLQTALGHLGNKVQIILSQK-SHAWLAMLEQKEIL 359
Query: 360 SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSF 419
Y YIGH T + E ++ R +LINM+V AD + L QD GLVI D+P
Sbjct: 360 QNYAYIGHLSTHRLVENQAVFDQAMRSDLINMMVDYADASIEALEQDSAEGLVIPDLPRL 419
Query: 420 FRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
R + P ++ +W+ K DF ++ YG F+WFK AL+ LF
Sbjct: 420 VRDGLFEIEPPR----PSLSAVWQEAGLHKSFDFMTASSLTRVYGGFLWFKNSALASLFQ 475
Query: 480 LNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKI 518
+ E S P + +E LLVY+AWD YDFKI
Sbjct: 476 MKSLE----SLPSSDQELSDVLEHLLVYLAWDSHYDFKI 510
>gi|81096905|ref|ZP_00875230.1| conserved hypothetical protein - possibly involved in cell wall
localization and side chain formation of
rhamnose-glucose polysaccharide [Streptococcus suis
89/1591]
gi|80977056|gb|EAP40614.1| conserved hypothetical protein - possibly involved in cell wall
localization and side chain formation of
rhamnose-glucose polysaccharide [Streptococcus suis
89/1591]
Length = 574
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 178/587 (30%), Positives = 306/587 (52%), Gaps = 25/587 (4%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKE-LVDEVL 59
M RLL+YVH+NK+N +SE++ +QL+ +R ++ ++F+SNS +S+D L+ E L+D +
Sbjct: 1 MSRLLVYVHYNKYNVVSEYIYFQLKSIRSIYSDIVFVSNSHVSKDIVQYLQSERLIDFFI 60
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
R NIG+DFAAW++G+ +V F + YDSVTLMNDTCFGPLWDLE Y F+ D +VDFW
Sbjct: 61 QRDNIGYDFAAWKEGLNQVTFYQ---YDSVTLMNDTCFGPLWDLEDYYSQFDSDVDVDFW 117
Query: 120 GMTNYRKDKD----FNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQV 175
GMTN+ + K EH+QSY++ FK+ ++ S+AF FW ++ + T++QDVI YE+Q+
Sbjct: 118 GMTNHLETKIDSVVVPEHLQSYFMVFKKQILQSQAFVGFWSSVSELTDIQDVIKLYESQL 177
Query: 176 TTNLVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPY 235
T L+ G+ Y+ V +T + + + P ILKN VPFIK+K+
Sbjct: 178 TKILLSEGYSYKCVLDT-SIYCKTLENSNITLEYPEVILKNNVPFIKIKSFTEYPDRIYS 236
Query: 236 ILNDIENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVD 295
+L+ I T YPV+LI +H+ +I +P ++ ++ + + + +H+H+ V
Sbjct: 237 LLHLIRMKTKYPVELIERHLRQIIIPGTSFIPPIRVSQTTETVR-SSTSVLLHVHIESVS 295
Query: 296 LLAEFLHAFESFHFSYDLFIT---TDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPM 352
+ E++ L IT TD K + + L + +A++ + ++
Sbjct: 296 IFEEYIEELCKISDRCQLLITLPETDFSNKCSIVERYLSTYKLRAQI---AKLTDELHFF 352
Query: 353 LKLKRHLSQYDYIGHFHTKKSKEADYWAGESW-RKELINMLVHPADQIVSQLGQDDCLGL 411
+ ++ Y+ H K++KE Y + R +L M D ++S L +
Sbjct: 353 EIVNNYMGDAKYLAHVTVKQTKEIKYSVEDIIDRHQLRKMFFTSFDAVISNFESQSNLAV 412
Query: 412 VIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKY 471
VI D+ + R++R + + ++N L+E + K+VDF ++ + ++ W K
Sbjct: 413 VIPDLTTNQRYDRQSLREGNPELIRQLNILYESLVRTKKVDFYKVPYIIGEEVSWYWIKT 472
Query: 472 DALSPLFDLNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDN 531
+ D EE + + L + L +Y AWD D+ + N ++ ++
Sbjct: 473 E------DYKKIEEKFRNIDFSKEDRLLLVPILFIYSAWDLSNDYAVVENTENVSPILEK 526
Query: 532 KQLNNREDLQPHT-FVDFNQIGGIKGAMKYIFIGPARAIKYILKRLL 577
++ +L+ +F QI G++ +K I +G K I K LL
Sbjct: 527 ISFSSERELRLIIEEKEFLQI-GLRRTLKIISVGIVSVFKMIKKSLL 572
>gi|146318939|ref|YP_001198651.1| polysaccharide biosynthesis protein [Streptococcus suis 05ZYH33]
gi|145689745|gb|ABP90251.1| polysaccharide biosynthesis protein [Streptococcus suis 05ZYH33]
Length = 587
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 176/587 (29%), Positives = 304/587 (51%), Gaps = 25/587 (4%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKE-LVDEVL 59
M RLL+YVH+NK+N +SE++ +QL+ +R ++ ++F+SNS +S+D L+ E L+D +
Sbjct: 14 MSRLLVYVHYNKYNVVSEYIYFQLKSIRSIYSDIVFVSNSHVSKDIVQYLQSERLIDFFI 73
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
R NIG+DFAAW++G+ +V F + YDSVTLMNDTCFGPLWDLE Y F+ D +VDFW
Sbjct: 74 QRDNIGYDFAAWKEGLNQVTFYQ---YDSVTLMNDTCFGPLWDLEDYYSQFDSDVDVDFW 130
Query: 120 GMTNYRKDKD----FNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQV 175
GMTN+ + K EH+QSY++ FK+ ++ S+AF FW ++ + T++QDVI YE+Q+
Sbjct: 131 GMTNHLETKIDSVVVPEHLQSYFMVFKKRILQSQAFVGFWSSVSELTDIQDVIKLYESQL 190
Query: 176 TTNLVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTPY 235
T L+ G+ Y+ +T + + + P ILKN VPFIK+K+
Sbjct: 191 TKILLSEGYSYKCALDT-SICCKTLENSNITLEYPEVILKNNVPFIKIKSFTEYPDRIYS 249
Query: 236 ILNDIENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDKKIAVHLHVFYVD 295
+L+ I T YPV+LI +H+ +I +P ++ ++ + + + +H+H+ V
Sbjct: 250 LLHLIRMKTKYPVELIERHLRQIIIPGTSFIPQIRVSQTTETVR-SSTSVLLHVHIESVS 308
Query: 296 LLAEFLHAFESFHFSYDLFIT---TDSEKKKNEILGILEGKQAKAEVFVTGNVGRDVLPM 352
+ E++ L IT D K + + L Q +A++ + ++
Sbjct: 309 IFEEYIEELCKIADRCQLLITLPEADFSNKCSIVERCLFTYQLRAQI---AKLTDELHFF 365
Query: 353 LKLKRHLSQYDYIGHFHTKKSKEADYWAGESW-RKELINMLVHPADQIVSQLGQDDCLGL 411
+ ++ Y+ H K++KE Y + R +L M D ++S L +
Sbjct: 366 EIVNNYMGDAKYLAHVTVKQTKEIKYSVEDIIDRHQLRKMFFTSFDAVISNFESQSNLAV 425
Query: 412 VIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKY 471
VI D+ + R++R + + ++N L+E + K+VDF ++ + ++ W K
Sbjct: 426 VIPDLTTNQRYDRQSLREGNPELIRQLNILYESLVRTKKVDFYKVPYIIGEEVSWYWIKT 485
Query: 472 DALSPLFDLNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDFKISYNQLGLTAFIDN 531
+ + EE + + L + L +Y AWD D+ + N ++ ++
Sbjct: 486 EHYKKI------EEKFRNIDFSKEDRLLLVPILFIYSAWDLSNDYAVVENTENVSPILEK 539
Query: 532 KQLNNREDLQ-PHTFVDFNQIGGIKGAMKYIFIGPARAIKYILKRLL 577
++ +L+ +F QI G++ +K I +G K I K LL
Sbjct: 540 ISFSSERELRLIIEEKEFLQI-GLRRTLKIISVGIVSVFKMIKKSLL 585
>gi|146321147|ref|YP_001200858.1| polysaccharide biosynthesis protein [Streptococcus suis 98HAH33]
gi|145691953|gb|ABP92458.1| polysaccharide biosynthesis protein [Streptococcus suis 98HAH33]
Length = 236
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 103/227 (45%), Positives = 153/227 (67%), Gaps = 9/227 (3%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKE-LVDEVL 59
M RLL+YVH+NK+N +SE++ +QL+ +R ++ ++F+SNS +S+D L+ E L+D +
Sbjct: 14 MSRLLVYVHYNKYNVVSEYIYFQLKSIRSIYSDIVFVSNSHVSKDIVQYLQSERLIDFFI 73
Query: 60 LRKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFW 119
R NIG+DFAAW++G+ +V F + YDSVTLMNDTCFGPLWDLE Y F+ D +VDFW
Sbjct: 74 QRDNIGYDFAAWKEGLNQVTFYQ---YDSVTLMNDTCFGPLWDLEDYYSQFDSDVDVDFW 130
Query: 120 GMTNYRKDK----DFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQV 175
GMTN+ + K EH+QSY++ FK+ ++ S+AF FW ++ + T++QDVI YE+Q+
Sbjct: 131 GMTNHLETKIDSVVVPEHLQSYFMVFKKRILQSQAFVGFWSSVSELTDIQDVIKLYESQL 190
Query: 176 TTNLVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIK 222
T L+ G+ Y+ +T + + + P ILKN VPFIK
Sbjct: 191 TKILLSEGYSYKCALDT-SICCKTLENSNITLEYPEVILKNNVPFIK 236
>gi|13476280|ref|NP_107850.1| hypothetical protein mlr7559 [Mesorhizobium loti MAFF303099]
gi|14027041|dbj|BAB53995.1| mlr7559 [Mesorhizobium loti MAFF303099]
Length = 644
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 146/548 (26%), Positives = 270/548 (49%), Gaps = 50/548 (9%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLL 60
M R ++ +++ Q+ +++ Y LEK+RP +IF+SN +ISQ E L+ VDE ++
Sbjct: 1 MRRAAIFFFYDERGQVDDYIFYLLEKLRPFVETIIFVSNGEISQSSEASLRST-VDETII 59
Query: 61 RKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWG 120
R+N GFD A+RDG++ +G+++L YD + L+N T +GP++ ++ + E R DFWG
Sbjct: 60 RENTGFDVGAYRDGLEFIGYDKLGDYDEILLLNHTFYGPVFPFSEMFSEME-RRACDFWG 118
Query: 121 MTNYRKDKD--------FNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYE 172
++++++ H+ S++++ ++ ++ S AF+ +W+ + T+ + + +E
Sbjct: 119 ISDHKEVSPNPFTGAGVLPRHLNSHFIAVRKAMLESIAFRNYWERMPKITDYAESVLLHE 178
Query: 173 TQVTTNLVQAGFHYQTVFNTIQADASG--MLYPDFSYYNPTSILKNRVPFIKVKTIAANE 230
++ T G+ +T ++ + +++ M+ D Y + + ILK R+ F + N
Sbjct: 179 SRFTGFFENLGYKSETYLDSDKYNSAYPVMIDVDQIYNDRSPILKRRLFFNDPTFLDKNA 238
Query: 231 GLTPYILNDIENTTDYPVDLIVKHMSR-IDLPDYPYLLGRKI-LDLSLPISLPDK----- 283
P L ++ T+DY ++LI +++ R DL R + + +L LPDK
Sbjct: 239 VDLPRALRVLKETSDYDLNLIWRNVLRSSDL--------RTLNTNAALMSVLPDKRIKGD 290
Query: 284 -------KIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAK 336
KIAV H++Y D+L E L + YD TT++ +KK EI L +
Sbjct: 291 GAAADYGKIAVCAHIYYTDMLDEILGLTGNIPVPYDFIATTNTPEKKAEIETALANRPGV 350
Query: 337 AEVF---VTGNVGRDVLPMLKLKRHL---SQYDYIGHFHTKKSKEADYWAGESWRKELIN 390
V V N GRD+ + R L +YD + HTKKS + G +++ +++
Sbjct: 351 KNVIVRVVEQNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQSSMGNLFKRHMVD 410
Query: 391 MLVHP---ADQIVSQLGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNC 447
L++ ++ + +GL IP F + + ++ P++ + +N
Sbjct: 411 NLLNSRGYVHNVLDMFHDNPSVGLA---IPPIFHISYPTMGFSWFANKPKVEETARLLNI 467
Query: 448 QKEVDFKQMNTFVMSYGTFVWFKYDALSPLFDLNMTEEDVPSEP-LPQNSILHAIERLLV 506
+ D NT V +YGT WF+ AL +F+ E+ +EP HA+ERL+
Sbjct: 468 NVKFD---ENTPVAAYGTMFWFRPRALRKMFEHKWKWEEFNAEPDHVDGGFAHALERLIA 524
Query: 507 YIAWDKQY 514
Y + Y
Sbjct: 525 YAVQNAGY 532
>gi|13476281|ref|NP_107851.1| hypothetical protein mlr7560 [Mesorhizobium loti MAFF303099]
gi|14027042|dbj|BAB53996.1| mlr7560 [Mesorhizobium loti MAFF303099]
Length = 637
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 146/549 (26%), Positives = 255/549 (46%), Gaps = 52/549 (9%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLL 60
M R+ ++ +N+ ++V++ LEK+R +++ +SN +S+ E +K D++L+
Sbjct: 1 MRRIAVFSLYNEHGIADDYVIFLLEKLREFVERIVVVSNGNLSKLSEIAIKAS-CDQLLV 59
Query: 61 RKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWG 120
R+N+GFD ++ G+ VGF+ L +YD + L+NDTC+GPL+ ++ + E R+ DFWG
Sbjct: 60 RENVGFDVWGYKTGIDAVGFDALSEYDELILLNDTCYGPLFPFSEMFSEME-RRDCDFWG 118
Query: 121 MTNYRK--------DKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYE 172
+ K H+ + +++ ++ ++ S AF+ +W+N+ D I +E
Sbjct: 119 SAAHSKMTPNPFTGTGHLPRHLTANFIAVREKMLKSRAFKTYWENLPAIKTYIDAIMLHE 178
Query: 173 TQVTTNLVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSI----LKNRVPFIKVKTIAA 228
+Q T + G+ + + D G YP F + T I L R PF T
Sbjct: 179 SQFTKHFTDLGYSAEAY---VDPDKYGSHYPAFINVDETIINRFPLLKRRPFFHDPTFLN 235
Query: 229 NEGLT-PYILNDIENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLPISLPDK---- 283
+G+ P L +E T+DY ++LI +++ R L + +L LPD+
Sbjct: 236 AQGIDLPRALRVLEETSDYDLNLIWRNVLRTS------ELRNLNTNAALMSVLPDERAKD 289
Query: 284 --------KIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQA 335
KIAV H++Y D+L E L + YD TTD+ KK EI L +
Sbjct: 290 DDAPSDYGKIAVCAHIYYTDMLEEILALTGNIPVPYDFIATTDTPDKKAEIEATLAKRPG 349
Query: 336 KAEVF---VTGNVGRDVLPMLKLKRHL---SQYDYIGHFHTKKSKEADYWAGESWRKELI 389
V V N GRD+ + R L +YD + HTKKS + +++ ++
Sbjct: 350 VKNVIVRVVEKNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQASRSNLFKRHML 409
Query: 390 NMLVHP---ADQIVSQLGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMN 446
L++ ++ + +GL + + + + AW P++ + +N
Sbjct: 410 ENLLNTRGYVHNVLDMFHDNPSVGLAVPPV-VHISYPTMGHAW--FFNRPKVEETARLLN 466
Query: 447 CQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFDLNMTEEDVPSEP-LPQNSILHAIERLL 505
+ + D +T V +YGT WF+ AL +F+ ED +EP + H +ERL+
Sbjct: 467 IKVKFDH---DTPVAAYGTMFWFRPRALRKMFEHKWKWEDFNAEPNHVDGGLAHVLERLI 523
Query: 506 VYIAWDKQY 514
Y A D Y
Sbjct: 524 AYAAQDAGY 532
>gi|3132260|dbj|BAA28137.1| unnamed protein product [Actinobacillus actinomycetemcomitans]
Length = 632
Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats.
Identities = 157/553 (28%), Positives = 282/553 (50%), Gaps = 62/553 (11%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLL 60
M+RL +Y+ ++ + +++ Y+LEK++ + + F+SNS ++ + +++ D ++
Sbjct: 1 MKRLAIYLFYDHDGIVDDYIPYKLEKLKEFVQDIWFVSNSGLTVESRKKIQG-CTDHIMC 59
Query: 61 RKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWG 120
R+NIGFD +++ ++K+GFE+L +YD V L+N T F P++ +++ E ++++DFWG
Sbjct: 60 RENIGFDVWGYKEAIEKIGFEKLAEYDEVILLNYTFFAPIFPFCELFEWSE-NQDIDFWG 118
Query: 121 MTNYRKDKD--------FNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYE 172
++++ + K +HIQS++++ ++ ++ S FQ +W+N+ D + +E
Sbjct: 119 ISDHAEIKPNPYTGTGVLPKHIQSHFIAIRKGLLGSYEFQDYWKNMPMINSYTDSVLMHE 178
Query: 173 TQVTTNLVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANEGL 232
++ T + G+ Y I +D + YP F T LK+R P +K + +
Sbjct: 179 SKFTDYFLSKGYSYSVY---ISSDNFPVNYPTFLSIEET--LKHRCPILKRRPFFHDP-- 231
Query: 233 TPYILND------------IENTTDYPVDLIVKHMSRIDLPD--YPYLLGRKILDLS-LP 277
I +D +EN T Y LI K++ R P L K+ D S +
Sbjct: 232 ---IYHDVECLFLRRSIEYVENNTTYDTSLIFKNILRTTKPKDLATNLTLLKVFDSSKVE 288
Query: 278 ISLPDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKK-----NEILGILEG 332
D KI V H++Y D+L E + ++ SYDL ITT +EK K N IL +
Sbjct: 289 KVRSDIKILVVAHIYYSDMLDEIISYTQNIPCSYDLLITTANEKSKLEIESNPILKMSGA 348
Query: 333 KQAKAEVFVTGNVGRDVLPM-LKLKRHL--SQYDYIGHFHTKKSKEADYWAGESWRKEL- 388
K +V V N GRD+ + + K+ + +YD++ H+KKS + + +++ +
Sbjct: 349 KGINVKV-VEQNRGRDMSSLFITCKQEIISERYDWVCRLHSKKSPQNSHNMSIHFKEMMY 407
Query: 389 INMLVHPA--DQIVSQLGQDDCLGLVIADIPSFFRFNRIVV--AW--NEALISPEMNKLW 442
+N+L A ++++ L ++ +G +PS + AW N L K+
Sbjct: 408 LNILKDKAYISKVINYLDKNKSIGFA---MPSMVHIGHPTLGHAWFTNRDLAI----KIA 460
Query: 443 ERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQNSIL-HAI 501
ER+ + + F ++ F +YGT WF+ +AL LF+ N ED EP+ Q+S L H +
Sbjct: 461 ERVGIK--LPFDDISPFA-AYGTMFWFRPEALKKLFEYNWKFEDFNKEPMHQDSSLAHIL 517
Query: 502 ERLLVYIAWDKQY 514
ERLLVY A D Y
Sbjct: 518 ERLLVYAAHDAGY 530
>gi|13476282|ref|NP_107852.1| hypothetical protein mlr7561 [Mesorhizobium loti MAFF303099]
gi|14027043|dbj|BAB53997.1| mlr7561 [Mesorhizobium loti MAFF303099]
Length = 609
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 137/543 (25%), Positives = 250/543 (46%), Gaps = 37/543 (6%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLL 60
M RL + ++++ +I E+ + + +RP +++ + N I + L + D L+
Sbjct: 1 MRRLAIAFYYDQEGKIDEYYFHLIASIRPFVEQLLVVCNGPIDDEARSRLP-DATDSFLI 59
Query: 61 RKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWG 120
R+N GFD A+R ++ +G++EL ++D + N T +GP++ ++ + + R+ DFWG
Sbjct: 60 RENKGFDVWAYRTALEHIGWDELSQFDEILFFNHTFYGPIFPFSEMFSEMD-QRHCDFWG 118
Query: 121 MTNYR---------KDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHY 171
++ ++ + + H+ S++++ ++++ S+AF+ +W + + + +
Sbjct: 119 ISAHKAIRPNPIDVRKSELPFHLNSHFIAVRRSLHQSKAFRDYWTRMVSINSYIESVAKH 178
Query: 172 ETQVTTNLVQAGFHYQTVFNT--IQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAAN 229
ET T + G+ + + + + PD + + + ILK R+ F ++
Sbjct: 179 ETVFTAHFQALGYTCSVLLDPERYRTPYPVFMEPDKTLEDRSPILKRRLFFHDTLSLERA 238
Query: 230 EGLTPYILNDIENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLP-------ISLPD 282
P L IEN +DY + LI K + R+ P L G L LP + D
Sbjct: 239 AINLPRALEIIENQSDYDLSLIWKSVGRLGSPR--TLNGNAALLSVLPDVQVGPQRNWDD 296
Query: 283 KKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEI-LGILEGKQA-KAEVF 340
+IAV HV+++D++ E L E+ YDL +TTD+ K+ I I + A A V
Sbjct: 297 CRIAVLAHVYHLDMIDEILGYAENVPKGYDLIVTTDNADKQALIQQAIAKATNASNAVVL 356
Query: 341 VTGNVGRDVLPMLKLKRHL---SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHP-- 395
V N GRD +L R +YD I H+K+S + D GE ++ L+H
Sbjct: 357 VVRNDGRDTSALLVGCRDYVLEDRYDLICRVHSKRSPQ-DGPRGELFKLHTFENLLHTPG 415
Query: 396 -ADQIVSQLGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFK 454
++ + LGLV +P + + A + KL ++ +D
Sbjct: 416 YVSNLLELFANNPALGLV---MPPLVHIGYPTIGNSWAGNKANVAKLARQLGLIVHLD-- 470
Query: 455 QMNTFVMSYGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQY 514
+T V YG WF+ AL LF+ D + S++HAIER++ Y+A D Y
Sbjct: 471 -DSTPVAPYGGMYWFRPAALRKLFEERWNWNDFANMDYRDGSLVHAIERIIAYVAIDAGY 529
Query: 515 DFK 517
F+
Sbjct: 530 TFR 532
>gi|119026520|ref|YP_910365.1| hypothetical protein BAD_1502 [Bifidobacterium adolescentis ATCC
15703]
gi|118766104|dbj|BAF40283.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
Length = 647
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 144/548 (26%), Positives = 246/548 (44%), Gaps = 46/548 (8%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLL 60
+ RL ++ ++ + ++V L +P F ++ + N K+++ + L + D +++
Sbjct: 8 INRLGIFFFYDSDGVVDDYVPTLLAGFKPHFSEMTIVCNGKLNEAGQSILSR-YTDNLII 66
Query: 61 RKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWG 120
R N GFD A++ + G+E+L+++D + L N T GP++ +++ R++DFWG
Sbjct: 67 RPNTGFDVWAYKTALDSYGWEKLEQFDEIVLFNATIMGPVYPFAEMFETMN-KRDLDFWG 125
Query: 121 MTNYRKDKD----------FNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDH 170
+T + K EHIQS++ ++++++V S+ FQ +W N+ D +
Sbjct: 126 ITKFHKVPQDPFGRSPFGYLPEHIQSHFHAYRRSLVQSKEFQDYWNNMPQINSYYDSVGM 185
Query: 171 YETQVTTNLVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTI---- 226
+E+ T GF + NT D G Y ++ T I + R P K ++
Sbjct: 186 HESLFTKRFADLGFKWDVYVNT--DDLEGFTYGPITFAAKTLIKEKRCPIFKRRSFFHDY 243
Query: 227 -------AANEGLTPYILNDIENTTDYPVDLIVKHMSR-IDLPDYPYLLGRKILDLSLP- 277
A N L + + + TDY V+LI ++ R ++L D L+ LD +P
Sbjct: 244 MDTLNQSAGNAALD--LFEYLRDHTDYDVNLIWQNALRTMNLAD---LVKNLHLDFVMPS 298
Query: 278 -ISLP---DKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGK 333
I+ P K+IA+ +H++Y+DLL + L +S D T SE+ + +G
Sbjct: 299 NITTPIPEGKRIALIMHLYYMDLLDKTLEYAKSMPEGCDFIFTVGSEENAKLVRERCKGL 358
Query: 334 QAKAEVFVTGNVGRDVLPML-KLKRHLSQYDYIGHFHTKK-SKEADYWAGESWR-KELIN 390
+V V N GRDV +L + +YDY+ H KK ++ + Y G+ + K N
Sbjct: 359 PYNVDVRVIQNRGRDVSALLIGAGKDCLKYDYVCFAHDKKVTQLSPYSIGDGFAYKCFEN 418
Query: 391 MLVHPA--DQIVSQLGQDDCLGLVIADIPSFFR-FNRIVVAWNEALISPEMNKLWERMNC 447
+L A I++ QD GL+ P+ F W E K
Sbjct: 419 ILGSKALVSNIINHFEQDPHAGLLAPTSPNHADYFGNFASLWGPNF---EGTKKMLEETL 475
Query: 448 QKEVDFKQMNTFVMSYGTFVWFKYDALSPLFDLNMTEEDVPSEPLP-QNSILHAIERLLV 506
+V + GT WF+ AL LFD++ ED P EP S+LH IER
Sbjct: 476 GVKVPLNPYKEPIAPLGTMFWFRPKALHQLFDIDWKYEDFPPEPNKIDGSMLHFIERAYG 535
Query: 507 YIAWDKQY 514
Y+ Y
Sbjct: 536 YLPQANGY 543
>gi|156863802|gb|EDO57233.1| hypothetical protein CLOL250_02043 [Clostridium sp. L2-50]
Length = 646
Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats.
Identities = 142/553 (25%), Positives = 249/553 (45%), Gaps = 71/553 (12%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLL 60
++RL +Y + K + +V Y + +I + N +++++ + ++ V++
Sbjct: 8 VKRLGIYFFYEKEGIVDSYVKYFFKDYVKQVTDMIVVCNGQLNEEGH-KFFEQYTKSVIV 66
Query: 61 RKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWG 120
R+N G D A++ M+ +G+E+L +YD + +N T GP++ L+ ++ + N+DFWG
Sbjct: 67 RENKGLDVWAYKTAMESLGWEKLVQYDEICFVNCTIMGPVYTLKETFEAMSKE-NLDFWG 125
Query: 121 MT-NYRKDKD---------FNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDH 170
MT +Y+ + D EHIQS+++ F+Q++V SE FQ FW + +D I +
Sbjct: 126 MTKHYKNEYDPFHNNRYGYLPEHIQSHFMVFRQSLVKSEDFQSFWDEMPMIKGYEDSIGN 185
Query: 171 YETQVTTNLVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAANE 230
+E+ T + G+ + T ++ YP +Y I R P K +
Sbjct: 186 FESIFTKHFADLGYKWDVYVKTDDI-SNKTDYPLMNYAKEL-IRDKRCPIFKRRMF---- 239
Query: 231 GLTPY--------------ILNDIENTTDYPVDLIVKHMSR-------IDLPDYPYLLGR 269
PY + + +++T Y V+LI ++ R + Y+L
Sbjct: 240 -FQPYEYEIFNTLGQPGKELYDYLKSTGLYDVNLIWDNILRTCHQADFVKNLHLNYILSS 298
Query: 270 KILDLS-LPISLPDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILG 328
D + + L +K+A+ +H+++ DL+ + + D++ITTD+ +KK IL
Sbjct: 299 SSYDQNKMDEILKKRKLALVMHLYFPDLVEDSFQWASNVPKETDVYITTDTVEKKEAILK 358
Query: 329 ILEGKQAK-AEVFVTGNVGRDVLPML-KLKRHLSQYDYIGHFHTKKSKEA------DYWA 380
+ + EV V N GRDV +L +K + YDY H KK+ +A D +
Sbjct: 359 VFKNLPCNHLEVRVIVNRGRDVSSILVGVKDVIQNYDYACFVHDKKTAQAKPGSVGDSFG 418
Query: 381 GESWRKELINMLVHPADQIVSQLGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNK 440
+ W L N ++ ++ LG++ P+ F + + N+
Sbjct: 419 YKCWNNTLYNKEF--VCNVLQTFEDNERLGILSPPEPNHGPFYQTL-----------GNE 465
Query: 441 LWERMNCQKEVDFKQMNTFVMS--------YGTFVWFKYDALSPLFDLNMTEEDVPSEPL 492
+EV K T MS YGTF WF+ AL LFD + E+ P EP
Sbjct: 466 WGCNFEKSREVADKLGITIPMSEDKEALAPYGTFFWFRPTALKVLFDHDWQYEEFPEEPN 525
Query: 493 P-QNSILHAIERL 504
+ILHAIERL
Sbjct: 526 NFDGTILHAIERL 538
>gi|154509526|ref|ZP_02045168.1| hypothetical protein ACTODO_02058 [Actinomyces odontolyticus ATCC
17982]
gi|153799160|gb|EDN81580.1| hypothetical protein ACTODO_02058 [Actinomyces odontolyticus ATCC
17982]
Length = 620
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 133/558 (23%), Positives = 240/558 (43%), Gaps = 72/558 (12%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLL 60
M+R + + F+ + ++++ L +R +++ +SNS + L K D V
Sbjct: 1 MKRAGILLFFDPQGLVDDYIVECLTSLREYLDEILVVSNSPLDDTARGRLLKGATD-VFE 59
Query: 61 RKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWG 120
R+N GFD +RDG+ + G++ L + D + L N T F P+ ++++ + VDFWG
Sbjct: 60 RENTGFDVGGYRDGIARFGWDRLGQIDELILFNYTFFAPINPWKNLFDRVDAAGAVDFWG 119
Query: 121 MTNYRKDKD--------FNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYE 172
+T + + + HIQS++++ + +++S F+ +W + D I +E
Sbjct: 120 ITEHDEVRPHPFLAATRMPRHIQSHWIAVRNPLLSSPDFRKYWDEMPPIRSYNDSIQWHE 179
Query: 173 TQVTTNLVQAGFHYQTVFNTIQADASGMLYPDFS--YYNPTSILKNRVPFIKVKTIAANE 230
++ T G+ + + + D YP + + N + +L + P +K + + +
Sbjct: 180 SRFTEYFGNLGYTHVVAYP--RED-----YPSRNPVFDNASMLLADGCPILKRRNLFHD- 231
Query: 231 GLTPYILN----------DIENTTDYPVDLIVKHMSRIDLP-------DYPYLLGRKILD 273
P L+ ++ Y DLI+ +++R P ++ +
Sbjct: 232 ---PLYLDRHAIIGADMLELAGKAGYDTDLILTNLARTSRPRDLVTNAGLTTVISPRADQ 288
Query: 274 LSLPISLPDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGK 333
+L + K +AV H+FY D+ E L Y L TT +E+ K I + +
Sbjct: 289 ATLDAAASLKILAV-AHIFYADMADEILDRLSVLPAGYHLVATTSNEENKALIEARAQER 347
Query: 334 QAKAEV-FVTGNVGRDVLPMLKLKRHL---SQYDYIGHFHTKKSKEADYWAGESWRKELI 389
A+V V+ N GRD+ L + +YD + H+KKS + DY A + +++ L
Sbjct: 348 GVDADVRVVSSNRGRDIGAFLVDCNDVLTSGEYDIVVKIHSKKSVQDDYNAAQLFKEHLY 407
Query: 390 NMLVHPADQIVSQLGQ---DDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMN 446
+ L+ +D + S L + LG+VIA +P + P M W N
Sbjct: 408 DNLLASSDHVASILAEFAAHPGLGMVIAPMPH--------------MGYPTMGHAW-FAN 452
Query: 447 CQKEVDF-KQMNTFV--------MSYGTFVWFKYDALSPLFDLNMTEEDVPSEP-LPQNS 496
DF K++ V YG+ + +ALS L + ED P E S
Sbjct: 453 RAPARDFAKKVGITVPFDDHQPLAPYGSMFIARPEALSLLTGAGLVPEDFPEEGGYKDGS 512
Query: 497 ILHAIERLLVYIAWDKQY 514
+ H IERLL Y + Y
Sbjct: 513 LAHVIERLLSYAVLSRGY 530
>gi|90425670|ref|YP_534040.1| glycosyl transferase, group 1 [Rhodopseudomonas palustris BisB18]
gi|90107684|gb|ABD89721.1| glycosyl transferase, group 1 [Rhodopseudomonas palustris BisB18]
Length = 846
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 83/245 (33%), Positives = 119/245 (48%), Gaps = 22/245 (8%)
Query: 284 KIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILE--GKQAKAEVFV 341
+IA+H H +Y DLL FL + S DLF+TT ++ +I L G Q A+V+
Sbjct: 596 RIAIHGHFYYPDLLESFLKLIAANASSVDLFLTTSGPEQAAQIRKSLRAFGIQ-NADVWS 654
Query: 342 TGNVGRDVLPMLK-LKRHLSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPA---- 396
N GRD+ P LK + L YD +GHFH K+SK D G+ WR L+ A
Sbjct: 655 VPNRGRDIGPFLKEMPDKLGSYDIVGHFHGKRSKHVDSTVGDQWRDFAWQHLIGDAFPMI 714
Query: 397 DQIVSQLGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQM 456
D I +D LGLV A+ P + W+E L ER+ + +++
Sbjct: 715 DVIADAFAEDAKLGLVFAEDP-------YLNGWDEN------RDLAERLAQRMKIEAPLP 761
Query: 457 NTFVMSYGTFVWFKYDALSPLFDLNMTEEDVPSEPLP-QNSILHAIERLLVYIAWDKQYD 515
F GT W + AL PLF LN+ D P EPLP +ILHA+ER++ + ++
Sbjct: 762 EHFDFPIGTMFWARVAALQPLFQLNLDWNDYPHEPLPIDGTILHALERIVPFAVQKSGFE 821
Query: 516 FKISY 520
+ +Y
Sbjct: 822 YATTY 826
>gi|82703518|ref|YP_413084.1| Glycosyl transferase, group 1 [Nitrosospira multiformis ATCC 25196]
gi|82411583|gb|ABB75692.1| Glycosyl transferase, group 1 [Nitrosospira multiformis ATCC 25196]
Length = 828
Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 92/280 (32%), Positives = 141/280 (50%), Gaps = 26/280 (9%)
Query: 257 RIDLPDYPYLLGRKILD-LSLPISLPDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFI 315
R PD P+ G + + P+S ++A+HLHV+Y +L E + + + DLFI
Sbjct: 564 RAGQPDGPWRYGLITSEEAARPLS-SSIRVALHLHVYYSELFPEIMARLKVNNVRPDLFI 622
Query: 316 TTDSEKKKNEILGILEGKQAKA-EVFVTGNVGRDVLPMLKL--KRHLSQYDYIGHFHTKK 372
+ +E +NE+ G+L K ++ + N GRD+ P+L L YD IGH HTKK
Sbjct: 623 SVPTECTRNEVTGLLNDYPGKVVDIQIVPNRGRDIGPLLTAFGSVFLDDYDAIGHLHTKK 682
Query: 373 SKE-ADYWAGESWRKELINMLV----HPADQIVSQLGQDDCLGLVIADIPSFFRFNRIVV 427
+ + +D G+ W L+ L+ + AD I+ ++ D +G+V D P F +
Sbjct: 683 TADLSDEMIGKRWYTFLLENLLGGKRNMADIILGRMTADPAIGIVFPDDPHVFDWGN--- 739
Query: 428 AWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFDLNMTEEDV 487
N+A +KL K FV GT W + +AL PLF L+++ +D
Sbjct: 740 --NKAHADSLASKLGLG---------KLQENFVFPMGTMFWARTEALRPLFTLDLSWQDY 788
Query: 488 PSEPLPQN-SILHAIERLLVYIAWDKQYDFKISYNQLGLT 526
P+EPLP + +ILHA+ERLL IA KQ + N G+T
Sbjct: 789 PAEPLPYDGTILHALERLLPLIA-AKQSTRSVLTNVTGVT 827
>gi|83582737|ref|YP_425043.1| Glycosyl transferase, group 1 [Rhodospirillum rubrum ATCC 11170]
gi|83578053|gb|ABC24603.1| Glycosyl transferase, group 1 [Rhodospirillum rubrum ATCC 11170]
Length = 1236
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 90/257 (35%), Positives = 123/257 (47%), Gaps = 21/257 (8%)
Query: 272 LDLSLPISLPDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILE 331
L+ SLP + K+ +H H +YVDL+ +FL FS DL ITT E + + LE
Sbjct: 975 LETSLPSPIEGGKVLLHGHFYYVDLIDDFLKKIIINDFSCDLIITTTDEDRAVFLRKKLE 1034
Query: 332 G-KQAKAEVFVTGNVGRDVLPMLKLKRHL--SQYDYIGHFHTKKSKEADYWAGESWRKEL 388
K EV V N+GRDV L S YD +GH H KKS G WR L
Sbjct: 1035 EYKNGSVEVRVVPNIGRDVGAFFTGLSDLKNSDYDVVGHIHGKKSIHLSDGTGNKWRNFL 1094
Query: 389 INMLV----HPADQIVSQLGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWER 444
L+ A VS L ++ +GLV A+ P F +++ N+ L N L ++
Sbjct: 1095 WEHLIGGEKKAAAIAVSALIRNPDIGLVFAEEPFLFGWDK-----NKEL----ANDLAKK 1145
Query: 445 MNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFDLNMTEEDVPSEPLP-QNSILHAIER 503
M +K + F GT W K AL P+FDLN+ ED P EP+P ++LHA+ER
Sbjct: 1146 MGIEKSLP----RFFDWPIGTMFWAKRKALEPIFDLNLRWEDYPPEPIPVYGTMLHALER 1201
Query: 504 LLVYIAWDKQYDFKISY 520
LL + + F +Y
Sbjct: 1202 LLPFAVEKAGFSFATTY 1218
>gi|109648358|ref|ZP_01372261.1| conserved hypothetical protein [Desulfitobacterium hafniense DCB-2]
gi|109641448|gb|EAT51003.1| conserved hypothetical protein [Desulfitobacterium hafniense DCB-2]
Length = 606
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 105/397 (26%), Positives = 188/397 (47%), Gaps = 38/397 (9%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLL 60
M RL ++V + K + E++ L+ ++ + K+ + N +I+++ + L++ + EVL+
Sbjct: 1 MNRLAIFVFWEKEGIVREYITVYLKGIKEVANKIYVVVNGEINKNGREILEETVGAEVLV 60
Query: 61 RKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWG 120
R N G DF A++ + G EE+ +YD V L N +C+GP++ ++ + +N+DFWG
Sbjct: 61 RPNEGVDFWAYKTALDAEG-EEISEYDEVILCNCSCYGPVYPFREMFDEMG-QKNLDFWG 118
Query: 121 MTNYRKDKDFNEH--IQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTN 178
+T + ++ E I SY++ F+ + S+ ++L+W+N+ ++ I +ET+ T
Sbjct: 119 ITEWPLNEAGYEGTWILSYFMVFRPRMFLSDVWKLYWENLCPVYSREECILLHETKFTQY 178
Query: 179 LVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTS-ILKNRVPFIKVKTIAA--NEGLTPY 235
GF Y + Y D + P ++ R P IK K A N L+ +
Sbjct: 179 FADKGFTYDVYCHNTPD------YIDLTIEAPDKLVIDQRCPIIKRKAFCAEYNRFLSYH 232
Query: 236 -------ILNDIENTTDYPVDLIVKHMSRIDLPDYPYLLGRKILDLSLP---ISLPDK-- 283
+ + I+ Y ++I+ + + Y ++ L+ LP + P K
Sbjct: 233 RGSASKRVFDYIQKNDLYDTNIILDDL--LATQHYAFIKNCLHLNYFLPSDYVVKPLKRQ 290
Query: 284 -KIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAE---- 338
K+ V HV+Y DLL H +S D+ ITT K E++GI+E K E
Sbjct: 291 PKVVVCFHVYYEDLLDSCFHYMQSIPQFADIVITT----PKKELVGIIEEKIKSYELNNT 346
Query: 339 -VFVTGNVGR-DVLPMLKLKRHLSQYDYIGHFHTKKS 373
+ V GR + ++ K + YDY H KKS
Sbjct: 347 TIKVINARGRAESAFLVATKDFILDYDYACIVHDKKS 383
>gi|125718324|ref|YP_001035457.1| Glycosyltransferase, putative [Streptococcus sanguinis SK36]
gi|125498241|gb|ABN44907.1| Glycosyltransferase, putative [Streptococcus sanguinis SK36]
Length = 993
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 76/271 (28%), Positives = 133/271 (49%), Gaps = 32/271 (11%)
Query: 2 ERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLLR 61
E++L+YV F ++ ++ + LEK+ L K + + N ++ + + L E +VL+R
Sbjct: 375 EKVLIYVIFESEPRLQQYKVIFLEKLAALADKTLIVVNGGLAAEDLETL--EQYGQVLVR 432
Query: 62 KNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWGM 121
N G+D AA+R+G+ +G E+L+ + L+NDT GP+ DL ++Q RN+DFWG+
Sbjct: 433 DNTGYDTAAFREGILSLGKEKLQHCSQLMLVNDTNIGPMSDLAAVFQTM-AGRNLDFWGI 491
Query: 122 TNYRKDKD---FNE------HIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYE 172
+ +D FN H+QSY+L + ++ SE F +W+ + D ++ I +E
Sbjct: 492 SYGETQEDITGFNRYGYIPNHLQSYFLVIEPLLLQSEEFYDYWEVLTDTDSREEAIGKHE 551
Query: 173 TQVTTNLVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIA----- 227
T T G+ Y + + + A Y +P +LK P IK ++
Sbjct: 552 TTFTKYFADLGYRYDALVHENRDSA--------MYIHPLRMLKAGSPLIKYTSLKNYDDQ 603
Query: 228 -------ANEGLTPYILNDIENTTDYPVDLI 251
E P L+ + TDYPV+++
Sbjct: 604 QFLWQGLERESEVPDFLDYVREKTDYPVEIL 634
>gi|81096900|ref|ZP_00875225.1| Glycosyl transferase, group 1 [Streptococcus suis 89/1591]
gi|80977051|gb|EAP40609.1| Glycosyl transferase, group 1 [Streptococcus suis 89/1591]
Length = 660
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 32/270 (11%)
Query: 3 RLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLLRK 62
R L+Y + + + ++ + LE + + R V+ + N K+ Q + L + +VL R+
Sbjct: 45 RYLIYTIYEHQSSLQDYKVIFLEALAKISRDVLIVVNGKLPQADINRLAQ--YGKVLERE 102
Query: 63 NIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWGMT 122
N G+D AA+R G+ G E L++Y+ + L+NDT GP DLE ++ +F D+ +DFWG++
Sbjct: 103 NEGYDVAAFRHGIIHTGKEALQQYNQLILVNDTNIGPFRDLEEVFSEFNSDQ-LDFWGIS 161
Query: 123 NYRKDKDFN---------EHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYET 173
+ DF +H+QSY++ + +++ E F +W+ + D I +ET
Sbjct: 162 MGEEQLDFTGYNPCGKIPKHLQSYFVVIENSLLRYEGFYDYWEKLSDTDSRNKAIGKHET 221
Query: 174 QVTTNLVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIA------ 227
GF Y + + A Y +P +LK P +K
Sbjct: 222 VFAKYFYDRGFKYDALIKDTKDSA--------LYIHPLKLLKQGCPLVKYSAFRNYDREQ 273
Query: 228 ------ANEGLTPYILNDIENTTDYPVDLI 251
E P ++ I TDYP++++
Sbjct: 274 YFWHGLERESEIPDLMEYIAKETDYPIEVV 303
>gi|33862360|ref|NP_893920.1| glycosyltransferase [Prochlorococcus marinus str. MIT 9313]
gi|33640473|emb|CAE20262.1| glycosyltransferase [Prochlorococcus marinus str. MIT 9313]
Length = 738
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 83/247 (33%), Positives = 125/247 (50%), Gaps = 23/247 (9%)
Query: 282 DKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAE-VF 340
+ IA+H+HV Y +LL L+A DLF++ + + +EI G + +
Sbjct: 499 ETTIALHVHVHYPELLDTILNALNYNKIRPDLFLSCTNHENHSEIQCKSAGANCTLKSII 558
Query: 341 VTGNVGRDVLPML-KLKRHL-SQYDYIGHFHTKKSKEADYWAGESWRKELINMLV----- 393
T N GRD+ P+L ++ + L ++Y+ GH HTKKS G SWR LI+ LV
Sbjct: 559 TTPNRGRDIGPLLTEIGKELDTKYEIYGHLHTKKSALLPGKQGCSWRDFLISNLVGMQDI 618
Query: 394 HPADQIVSQLGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDF 453
AD+IV+ L ++ LGLV AD P+ V W+ ++ L ++N
Sbjct: 619 AMADRIVTALKKNPKLGLVFADDPT-------CVGWSGNRKHADI--LANKLNLGP---- 665
Query: 454 KQMNTFVMSYGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQN-SILHAIERLLVYIAWDK 512
F GT W K AL+ L++LN+ ED P EPL + +ILHAIERLL IA +
Sbjct: 666 -LPRCFDFPVGTMFWAKKGALTELYNLNLGWEDYPQEPLGYDGTILHAIERLLPIIAAKQ 724
Query: 513 QYDFKIS 519
+ + ++
Sbjct: 725 GFTYNLT 731
>gi|146318933|ref|YP_001198645.1| Lipopolysaccharide biosynthesis protein [Streptococcus suis
05ZYH33]
gi|146321140|ref|YP_001200851.1| Lipopolysaccharide biosynthesis protein [Streptococcus suis
98HAH33]
gi|145689739|gb|ABP90245.1| Lipopolysaccharide biosynthesis protein [Streptococcus suis
05ZYH33]
gi|145691946|gb|ABP92451.1| Lipopolysaccharide biosynthesis protein [Streptococcus suis
98HAH33]
Length = 686
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 32/270 (11%)
Query: 3 RLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLLRK 62
R L+Y + + + ++ + LE + + R V+ + N K+ Q + L + +VL R
Sbjct: 71 RYLIYTIYEHQSSLQDYKVIFLEALAKISRDVLIVVNGKLPQADINRLAQ--FGKVLERD 128
Query: 63 NIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWGMT 122
N G+D AA+R G+ G E L++Y+ + L+NDT GP DLE ++ +F D+ +DFWG++
Sbjct: 129 NEGYDVAAFRHGIIHTGKEALQQYNQLILVNDTNIGPFRDLEEVFSEFNSDQ-LDFWGIS 187
Query: 123 NYRKDKDFN---------EHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYET 173
+ DF +H+QSY++ + +++ E F +W+ + D I +ET
Sbjct: 188 MGEEQLDFTGYNPYGKIPKHLQSYFVVIENSLLRYEGFYDYWEKLSDTDSRNKAIGKHET 247
Query: 174 QVTTNLVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIA------ 227
GF Y + + A Y +P +LK P +K
Sbjct: 248 VFAKYFYDRGFKYDALIKDTKDSA--------LYIHPFKLLKQGCPLVKYSAFRNYDREQ 299
Query: 228 ------ANEGLTPYILNDIENTTDYPVDLI 251
E P ++ I TDYP++++
Sbjct: 300 YFWHGLERESEIPDLMEYIAKETDYPIEVV 329
>gi|17938295|ref|NP_535084.1| hypothetical protein Atu4606 [Agrobacterium tumefaciens str. C58]
gi|17743098|gb|AAL45400.1| hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 536
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 69/282 (24%), Positives = 141/282 (50%), Gaps = 27/282 (9%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLL 60
M RL++Y ++ + +V++ L + K++ + N +++D ++L+ + + ++L
Sbjct: 1 MNRLIVYFFWDADGIVDNYVIHALTSLHDYASKIVVVVNGHVNEDGLNKLR-SVSNTLIL 59
Query: 61 RKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWG 120
R N G D A++ +++G+E + +D V + N T +GP+ L +++ + D WG
Sbjct: 60 RDNYGLDAWAYKAAFEQLGYEYIASFDEVLVTNFTLYGPVIPLSDMFKKMDATA-CDLWG 118
Query: 121 MTNY-RKDKDFNE--HIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTT 177
+ Y +K D +E HIQS+++S+++++ +++ F+ +W + D ++ +E T
Sbjct: 119 IAGYNQKTSDGSEVQHIQSFFVSYRRSLTSTKDFENYWNQLPKIETYADSVNLHELSQTP 178
Query: 178 NLVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRV------PFIKVKTIAANEG 231
G+ T + AS Y + S N +R+ PFIK + + + G
Sbjct: 179 YFAARGY-------TFASWASTEKYANVSPANFIITCADRLLVEDGCPFIKRRALFFSNG 231
Query: 232 -LTP--------YILNDIENTTDYPVDLIVKHMSRIDLPDYP 264
P +I N I++ TDY V +I+++MSR P P
Sbjct: 232 RFEPGSGIQKIEHITNFIKSRTDYDVSMILENMSRTQKPVTP 273
>gi|156863801|gb|EDO57232.1| hypothetical protein CLOL250_02042 [Clostridium sp. L2-50]
Length = 783
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 67/279 (24%), Positives = 142/279 (50%), Gaps = 26/279 (9%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLL 60
M+R +++ +++ + E+++Y L+ M F K+ + N +S + +L+ +V +
Sbjct: 1 MKRQGIFLLYDEQGCVDEYIVYMLQSMNQYFDKITVVCNGILSSEGRKKLESIDRIQVFV 60
Query: 61 RKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLW--DLEHIYQDFEVDRNVDF 118
R+N GFD A+++ M+ +G+EE+K D + + N T GP++ DL+ +++ + +NVDF
Sbjct: 61 RENKGFDVWAYKEAMEHIGWEEIKDIDELIMFNYTLMGPVYEQDLDRMFKTMDA-KNVDF 119
Query: 119 WGMTNYR----------KDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVI 168
WG+T Y D +H+QS++++ +++++ S F+ +W+ T ++ +
Sbjct: 120 WGLTLYHGVPFDPWGILPDHKLPDHLQSHFIAVRKHMLASVEFETYWKTRPMITCYEEAV 179
Query: 169 DHYETQVTTNLVQAGFHYQTVFNTIQADASGMLYPDF--------SYYNPTSILKNRVPF 220
+E T + GF ++ N + + YP F Y+ P K ++ F
Sbjct: 180 AFHEAIFTQHFSNCGFKWKAYCNP-EENVIANPYPLFMAPIQMVMDYHCP--FFKRKLFF 236
Query: 221 --IKVKTIAANEGLTPYILNDIENTTDYPVDLIVKHMSR 257
+K K + ++ ++ I+ T Y LI+K++ R
Sbjct: 237 YPMKEKIVDSSSYISRVFYQFIKQETPYDETLILKNLIR 275
>gi|90425669|ref|YP_534039.1| putative glycosyltransferase [Rhodopseudomonas palustris BisB18]
gi|90107683|gb|ABD89720.1| putative glycosyltransferase [Rhodopseudomonas palustris BisB18]
Length = 321
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 82/289 (28%), Positives = 131/289 (45%), Gaps = 41/289 (14%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLL 60
++R +YVHF+ +++ V QL + L ++ F+SNS DQ + L E++L
Sbjct: 38 LKRHAVYVHFHPEGVVADFVAAQLREFSRLGFRITFVSNSPTIDDQLITILSPLCREIIL 97
Query: 61 RKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQ--DFEVDRNVDF 118
R+N G+DF A+RDG+ + +L + L ND+ +GPL+ L+ + D EV D
Sbjct: 98 RRNTGYDFGAYRDGIMSI--PDLPSTQCLVLANDSVYGPLFPLDELLGRCDPEV---FDV 152
Query: 119 WGMTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTN 178
WG T+ ++ H+QSY+L F + S AF FW + + VI E +T
Sbjct: 153 WGATD---SEEIAYHLQSYFLVFYGRAIKSRAFWRFWFWFPNIDSRKFVIKCGEIGLTQR 209
Query: 179 LVQAGFHYQTVFNTIQAD-------ASGMLYP---------------DFSYYNPTS---- 212
LV+AG V+ + A+ +S P + +NPT
Sbjct: 210 LVKAGLRVGAVYKCVDAEIRKARKISSVEALPRDPQIEAFLALIETRKPTMFNPTHFFWE 269
Query: 213 --ILKNRVPFIKVKTIAANEGLTPY---ILNDIENTTDYPVDLIVKHMS 256
++ R PF+K I N P+ I T Y V +I KH++
Sbjct: 270 ELVIYERYPFLKRDLIRENYWKVPFGQPWHKVIVEHTSYDVAMIDKHIT 318
>gi|15890382|ref|NP_356054.1| hypothetical protein AGR_L_543 [Agrobacterium tumefaciens str. C58]
gi|15158601|gb|AAK88839.1| AGR_L_543p [Agrobacterium tumefaciens str. C58]
Length = 548
Score = 99.8 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 68/282 (24%), Positives = 141/282 (50%), Gaps = 27/282 (9%)
Query: 1 MERLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLL 60
+ RL++Y ++ + +V++ L + K++ + N +++D ++L+ + + ++L
Sbjct: 13 VNRLIVYFFWDADGIVDNYVIHALTSLHDYASKIVVVVNGHVNEDGLNKLR-SVSNTLIL 71
Query: 61 RKNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWG 120
R N G D A++ +++G+E + +D V + N T +GP+ L +++ + D WG
Sbjct: 72 RDNYGLDAWAYKAAFEQLGYEYIASFDEVLVTNFTLYGPVIPLSDMFKKMDATA-CDLWG 130
Query: 121 MTNY-RKDKDFNE--HIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTT 177
+ Y +K D +E HIQS+++S+++++ +++ F+ +W + D ++ +E T
Sbjct: 131 IAGYNQKTSDGSEVQHIQSFFVSYRRSLTSTKDFENYWNQLPKIETYADSVNLHELSQTP 190
Query: 178 NLVQAGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRV------PFIKVKTIAANEG 231
G+ T + AS Y + S N +R+ PFIK + + + G
Sbjct: 191 YFAARGY-------TFASWASTEKYANVSPANFIITCADRLLVEDGCPFIKRRALFFSNG 243
Query: 232 -LTP--------YILNDIENTTDYPVDLIVKHMSRIDLPDYP 264
P +I N I++ TDY V +I+++MSR P P
Sbjct: 244 RFEPGSGIQKIEHITNFIKSRTDYDVSMILENMSRTQKPVTP 285
>gi|78211746|ref|YP_380525.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
CC9605]
gi|78196205|gb|ABB33970.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
CC9605]
Length = 1030
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 63/227 (27%), Positives = 120/227 (52%), Gaps = 15/227 (6%)
Query: 6 LYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKK--ELVDEVLLRKN 63
++VH++ I++ +Y LEK+ + + F+S+S+ + +E++K L ++L+RKN
Sbjct: 761 IFVHYDIDPLITDDCVYHLEKLSE-YCDIFFVSSSECLANAPEEVEKIKPLCSQILIRKN 819
Query: 64 IGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDF-EVDRNVDFWGMT 122
G+DF W ++K + L Y+ V L ND+ +GPL D + DF G+T
Sbjct: 820 SGYDFGCWSHVIRK-NYARLCNYEGVLLANDSNWGPLNDFSDTFARINRYSSEADFMGLT 878
Query: 123 NYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLVQA 182
+ + H+QS+++ + + V +S F+L+W NI ++I +YE + LV+
Sbjct: 879 SSITP---SWHLQSFFIFYSRKVFSSSFFKLYWFNIGILDSKYEIIMNYEVGWSARLVRL 935
Query: 183 GFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAAN 229
GF ++ T +A + ++ N S+L++R P++K + I N
Sbjct: 936 GFKGIALYGTSEAT-------NPTHVNWESLLRSRYPYLKKELIRDN 975
>gi|78184215|ref|YP_376650.1| possible glycosyltransferase [Synechococcus sp. CC9902]
gi|78168509|gb|ABB25606.1| possible glycosyltransferase [Synechococcus sp. CC9902]
Length = 972
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 4 LLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKK--ELVDEVLLR 61
L++ HF+ N++ +L LE F V+ +S S + + L+K +L+R
Sbjct: 724 LIVMAHFDPTNRLRPDLLKLLESYAQ-FGDVVLVSASPGLRWHWNTLRKLKRCCRAILIR 782
Query: 62 KNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWGM 121
+N G+DF +W + + ++ D + L ND+ +GP+ L+ ++Q + + D G+
Sbjct: 783 RNEGYDFGSWMAALHSLK-RDIDNIDQLILTNDSFWGPITPLDDLFQRLKAS-SADVIGL 840
Query: 122 TNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLVQ 181
T+ D+ + H+QS +L+F++ V+ S+AFQ FW ++ + +D+I YE + L +
Sbjct: 841 TD---DQMYAPHLQSAFLAFRKPVIQSDAFQSFWNQLESWPRKRDLIKKYEVGLPVCLQK 897
Query: 182 AGFHYQTVF 190
AGF ++++
Sbjct: 898 AGFKTESLY 906
>gi|46241623|gb|AAS83008.1| polysaccharide biosynthesis protein-like protein [Azospirillum
brasilense]
Length = 348
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 70/291 (24%), Positives = 133/291 (45%), Gaps = 47/291 (16%)
Query: 3 RLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLLRK 62
R++++VH+++ + + V + L ++ L ++F SN+ + + E +++ +L R
Sbjct: 58 RVVVFVHYDRQGIVHDFVWHYLRQLHALGFAIVFASNAPRLAESQIEPLRDICALILRRD 117
Query: 63 NIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWGMT 122
N+G+DF A+++G+ V EL D + L ND+ +GPL L + + + ++ D WG +
Sbjct: 118 NVGYDFGAYKEGIAAV--PELPALDMLLLANDSVYGPLHHLAGLLERMD-PQDADVWGAS 174
Query: 123 NYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNL--- 179
+ +F+ H+QSY+L F + + S AF FW ++ ++ YE +T L
Sbjct: 175 D---SWEFSFHLQSYFLLFHKAALASPAFGAFWDRLRYVQSKTWIVRKYEIGLTRALRRT 231
Query: 180 ---VQAGFHY-----------------------------QTVFNTIQADASGMLYPDFSY 207
+A F Y Q VF TI A G+ +
Sbjct: 232 GLRCRAAFPYRQAATALIEAVVERNIAGDGIDPVRKTFIQQVFRTINA---GVPLNGTHF 288
Query: 208 YNPTSILKNRVPFIKVKTIAANEGLTP---YILNDIENTTDYPVDLIVKHM 255
+ I + PF+K + N P Y ++ ++DY +LI++H+
Sbjct: 289 FWDYLIAQMDFPFLKRDLLQKNPARIPLLNYWERVVKQSSDYDTELILRHL 339
>gi|116071137|ref|ZP_01468406.1| possible glycosyltransferase [Synechococcus sp. BL107]
gi|116066542|gb|EAU72299.1| possible glycosyltransferase [Synechococcus sp. BL107]
Length = 961
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 63/228 (27%), Positives = 120/228 (52%), Gaps = 14/228 (6%)
Query: 4 LLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELK--KELVDEVLLR 61
L++ HF+ N++ +L LE F V+ +S S + ++ K+ +L+R
Sbjct: 717 LIVMAHFDPSNRLRPDLLNLLESYAK-FGDVVLVSASPGLRWHWRTMRRLKQSCRGILIR 775
Query: 62 KNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWGM 121
+N G+DF +W ++ + ++LK + L ND+ +GP+ L+ +++ + + D G+
Sbjct: 776 RNEGYDFGSWMAALRWLK-KDLKHIQQLILTNDSFWGPITPLDDLFERIK-SSDADIIGL 833
Query: 122 TNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLVQ 181
T+ D+ + H+QS +L+F+Q V+ SEAFQ FW ++ + +D+I YE + L Q
Sbjct: 834 TD---DQMYTPHLQSAFLAFQQPVIQSEAFQNFWDQLKSWPRKRDLIKKYEVGLPVLLQQ 890
Query: 182 AGFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAAN 229
+GF ++++ Q +L+ + T KN PF+KV + N
Sbjct: 891 SGFKTESLYT--QNANGNILHTAWRELIET---KN-FPFLKVSLLRDN 932
>gi|148260354|ref|YP_001234481.1| Lipopolysaccharide biosynthesis protein-like protein [Acidiphilium
cryptum JF-5]
gi|146402035|gb|ABQ30562.1| Lipopolysaccharide biosynthesis protein-like protein [Acidiphilium
cryptum JF-5]
Length = 326
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 95/182 (52%), Gaps = 5/182 (2%)
Query: 3 RLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLLRK 62
R++L++H+++ ++ E + + ++ R V+F++N+ + L +L+R+
Sbjct: 30 RVVLFLHWDRGGRVREALFDYIAQLAASGRSVVFVTNAGALDPGAEARLLALCAGILVRR 89
Query: 63 NIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWGMT 122
NIG+DF WRD ++ + + + + + ND+ FGP+ ++ + + D D WG+T
Sbjct: 90 NIGYDFGGWRDAIETLDLPQ-SGTEEIIIANDSIFGPVRPIDSMLLRLDYDE-ADVWGLT 147
Query: 123 NYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLVQA 182
+ + H+QSY+++F + S AF+ FW + VI YE +T +++A
Sbjct: 148 ESWQRR---YHLQSYFVAFGPRAIRSPAFRRFWSGVIPAPSKPYVIGKYEVGLTQAMIRA 204
Query: 183 GF 184
G
Sbjct: 205 GL 206
>gi|116071633|ref|ZP_01468901.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
BL107]
gi|116065256|gb|EAU71014.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
BL107]
Length = 1036
Score = 86.3 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 60/227 (26%), Positives = 118/227 (51%), Gaps = 14/227 (6%)
Query: 6 LYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKK--ELVDEVLLRKN 63
++VH++K + IS ++ +EK+ + + F+S+S+ + +++KK ++L+RKN
Sbjct: 765 IFVHYDKDSLISADCVHHVEKLSE-YCDLFFVSSSEYLKKLPEQVKKIKPFCKQILIRKN 823
Query: 64 IGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFE-VDRNVDFWGMT 122
G+DF W ++K + +L +Y V L ND+ +GPL D + + +VD+ G+T
Sbjct: 824 SGYDFGCWSHVIRK-NYGQLCEYKGVLLANDSNWGPLDDFSDTFLKINNLLNDVDYIGLT 882
Query: 123 NYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLVQA 182
+ H+QS+++ + + V +S F+ W NI D++ YE T L +
Sbjct: 883 SSTTP---TWHLQSFFVMYSKKVFSSSYFKQHWFNIGILNSKFDIVMRYEVDWCTRLKRL 939
Query: 183 GFHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTIAAN 229
GF +++ + AS + D+ ++KN+ P++K + I N
Sbjct: 940 GFTGTSLYGN-SSTASNPTHVDWE-----KLIKNKYPYLKKELIREN 980
>gi|89900872|ref|YP_523343.1| Lipopolysaccharide biosynthesis protein-like [Rhodoferax
ferrireducens T118]
gi|89345609|gb|ABD69812.1| Lipopolysaccharide biosynthesis protein-like [Rhodoferax
ferrireducens DSM 15236]
Length = 305
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 11/185 (5%)
Query: 16 ISEHVLYQLEKMRPLFRKVIFISNSKISQDQ---EDELKKELVDEVLLRKNIGFDFAAWR 72
+ HV++ +E + +VI I N+ ++ D + +L+ L VL+R+N GFDF AW
Sbjct: 79 LKTHVIHHVEHLLDAGIQVILIVNTNLATDTLTIDADLEARL-SGVLVRENTGFDFGAWA 137
Query: 73 DGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVD-RNVDFWGMTNYRKDKDFN 131
+ + K + + L+ND+ GPL E + + DF G+T
Sbjct: 138 HAYSLL---DRKLWHRLYLINDSIVGPLGQTEFARMMGRIKASSADFIGLTESLAPA--- 191
Query: 132 EHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLVQAGFHYQTVFN 191
H+QSY+L F +N + S AF +IQ+ E V+D YE ++T L G ++ +F
Sbjct: 192 RHLQSYFLVFNRNALLSHAFNKRILSIQNLPEKGQVVDIYEIRLTQQLCALGLRFEALFP 251
Query: 192 TIQAD 196
T+ D
Sbjct: 252 TLSND 256
>gi|84501312|ref|ZP_00999517.1| hypothetical protein OB2597_13143 [Oceanicola batsensis HTCC2597]
gi|84390603|gb|EAQ03091.1| hypothetical protein OB2597_13143 [Oceanicola batsensis HTCC2597]
Length = 741
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 33/242 (13%)
Query: 281 PDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILG-ILEGKQAKAEV 339
P + A+HLH++Y DL EF + S+DL++T + E L I+ +A+V
Sbjct: 126 PRARFAIHLHLYYPDLWPEFSERLDRLDLSFDLYVTLTWRGPETEWLADIIREAHPRAQV 185
Query: 340 FVTGNVGRDVLPMLKLKR--HLSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPAD 397
F N GRD+LP L+L Y+ I H KKS D G++WR+ L++ ++ P
Sbjct: 186 FPVANRGRDILPFLRLLNAGAFDGYEAICKLHGKKSPHRD--DGDAWRRHLVDGVL-PGK 242
Query: 398 QIVSQLG---QDDCLGLVIAD-----IPSFFRFNRIVVAWNEALISPEMNKLWERMNCQK 449
+ + L D+ L +AD + ++ NR A +AL+ +
Sbjct: 243 ALWTSLSAFLADEDAALWVADGQRYSVRKWWGSNR---ARTDALL--------------R 285
Query: 450 EVDFKQMNT-FVMSYGTFVWFKYDALSPLFDLNMTEEDV-PSEPLPQNSILHAIERLLVY 507
V+ + +T F G+ W K L + L++TE+ P ++ HA ER +
Sbjct: 286 RVELDRSDTDFDFPAGSMYWMKPLLLGMIRALDLTEDLFEPESGQTDGTLAHAFERAIGA 345
Query: 508 IA 509
+A
Sbjct: 346 LA 347
>gi|148927812|ref|ZP_01811237.1| Lipopolysaccharide biosynthesis protein-like protein [candidate
division TM7 genomosp. GTL1]
gi|147886838|gb|EDK72383.1| Lipopolysaccharide biosynthesis protein-like protein [candidate
division TM7 genomosp. GTL1]
Length = 498
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 70/244 (28%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
Query: 275 SLPISLPDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQ 334
S P+ P ++AV +H+FY +L E ++ +DL ITT E +E++
Sbjct: 231 SSPLGRPGVRLAVVVHIFYPELANEIYDVIKNIVEPFDLIITTPHEGAVSELIDTFAPLA 290
Query: 335 AKAEVFVTGNVGRDVLPMLKLKRH--LSQYDYIGHFHTKKSKEADYWAGESWRKELINML 392
+ + ++ N GRDV P L + R L +YD + H+KKS +D +G+ W++ L L
Sbjct: 291 SSVAIALSENRGRDVGPFLAVHRSGLLERYDAVLKLHSKKSTYSD--SGQQWQQSLFRQL 348
Query: 393 VHPADQIVSQ---LGQDDCLGLV-----IADIPSFFRFNRIVVAWNEALISPEMNKLWER 444
+ QIV + L +D G+V P ++ NR P ++KL +
Sbjct: 349 CGNS-QIVRRSVALLRDGKTGMVGPHDYYLTHPHYWGANR-----------PAVHKLLQS 396
Query: 445 MNCQ--KEVDFKQMNTFVMSYGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQNSIL-HAI 501
+ KE D + F GT WF A+ L D+ + SE Q+ L HA+
Sbjct: 397 LTATPLKEEDVP-LRFFA---GTMFWFAPKAIVALHDIPEALLNFESENGKQDGTLAHAL 452
Query: 502 ERLL 505
ERL
Sbjct: 453 ERLF 456
>gi|33865175|ref|NP_896734.1| possible glycosyltransferase [Synechococcus sp. WH 8102]
gi|33638859|emb|CAE07156.1| possible glycosyltransferase [Synechococcus sp. WH 8102]
Length = 980
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 111/221 (50%), Gaps = 14/221 (6%)
Query: 11 NKFNQISEHVLYQLEKMRPLFR-KVIFISNSKISQDQEDELKKELVDEVLLRKNIGFDFA 69
N I +L L K R F +V+ + S + +E + + D +++R+N G+DF
Sbjct: 734 NNDKPIRSDILDLLRKYRRYFYVQVVAATPSLLHHPRELTTLRSVCDGLIIRRNEGYDFG 793
Query: 70 AWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWGMTNYRKDKD 129
+W G++ + + + SV L ND+ +GP+ L + + D G+T+ +
Sbjct: 794 SWMTGLR-FCRDLIDQRQSVLLSNDSFWGPIRPLTGMINRL-ANSQADVIGLTD---NLM 848
Query: 130 FNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLVQAGFHYQTV 189
+ H+QS +L FK+ V+ +F FW NI + E + ++ +YE ++ L + G +++
Sbjct: 849 YEPHLQSAFLMFKRRAVSCPSFWQFWDNIMCWDEKRSIVKNYEVGLSVLLKENGMTLESL 908
Query: 190 FNTIQADASG-MLYPDFSYYNPTSILKNRVPFIKVKTIAAN 229
++ +A+G +L+ ++ + I + PFIKV + N
Sbjct: 909 YSK---NANGNILHAEWK----SLIEDHEFPFIKVSLLRDN 942
>gi|82702301|ref|YP_411867.1| Lipopolysaccharide biosynthesis protein-like [Nitrosospira
multiformis ATCC 25196]
gi|82410366|gb|ABB74475.1| Lipopolysaccharide biosynthesis protein-like [Nitrosospira
multiformis ATCC 25196]
Length = 325
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 6/167 (3%)
Query: 6 LYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLLRKNIG 65
L+ F+K + + E+V Y L + ++F+S+S + + E ++ R+N G
Sbjct: 71 LFCSFDKDSVVRENVYYYLNALMLAGFDIVFVSSSGMISGSDLEKLSRCCIAIINRENKG 130
Query: 66 FDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWGMTNYR 125
+DF W+ ++K + E +++ + L ND+ GPL+ +++I E D GMT+
Sbjct: 131 YDFYGWKTALEK--YPEYREHSGLLLANDSVLGPLFSIDNIIARLE-GSEADIVGMTDSF 187
Query: 126 KDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYE 172
+ F H+QSY+L K+ V+S+ F F+ I+ ++ YE
Sbjct: 188 R---FYPHLQSYFLYCKKKTVSSDEFLRFFTEIEVLEFKPAIVRRYE 231
>gi|119876653|ref|ZP_01643696.1| Lipopolysaccharide biosynthesis protein-like [Stenotrophomonas
maltophilia R551-3]
gi|119820799|gb|EAX23403.1| Lipopolysaccharide biosynthesis protein-like [Stenotrophomonas
maltophilia R551-3]
Length = 686
Score = 72.4 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 64/222 (28%), Positives = 100/222 (45%), Gaps = 19/222 (8%)
Query: 287 VHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVG 346
V +H +++D L E L A + L ITT S+++ ++ I E AE++ N G
Sbjct: 442 VVIHAWHLDALPELLSAVKDSGLPARLVITTTSDRQA-QVQSITESHGLPAEIWAYDNHG 500
Query: 347 RDVLPMLKLKRHLSQYD--YIGHFHTKKSKEADYWAGESWRKELINMLVHPADQI--VSQ 402
RD+LP L L Q + + HTK+S D G+ WR+E+++ L+ PA ++
Sbjct: 501 RDILPFLHAADRLLQQNESLVLKLHTKRSTHRD--NGDQWRREMVDALLGPAQAAANLAH 558
Query: 403 LGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMS 462
L D LGL+ P+ N VA + M +LW ++ Q +
Sbjct: 559 LQADPRLGLM---APAGHLLN---VADYIGGNAQRMERLWAQLGLDGAPGDGQFAS---- 608
Query: 463 YGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQNSIL-HAIER 503
G+ W + AL PL D ++ E + L HAIER
Sbjct: 609 -GSMFWVRLQALRPLLDAHLLPSMFEVEAGQIDGTLAHAIER 649
>gi|78213547|ref|YP_382326.1| possible glycosyltransferase [Synechococcus sp. CC9605]
gi|78198006|gb|ABB35771.1| possible glycosyltransferase [Synechococcus sp. CC9605]
Length = 1003
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 117/234 (50%), Gaps = 16/234 (6%)
Query: 4 LLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKK--ELVDEVLLR 61
+++ HF+ N+ + L+ L F VI +S++ + L + + +++R
Sbjct: 725 IVVLAHFSADNRFRDD-LFPLIDEYQRFADVIVVSSASGVRWHPRTLHRLRQRCAAIVIR 783
Query: 62 KNIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWGM 121
+N G+DF +W+ + + +++ + + L ND+ +GP+ L+ ++Q + R D G+
Sbjct: 784 RNQGYDFGSWKAALN-LHRQDIDQAAFLVLTNDSFWGPIAPLDDLFQRLQASR-ADVIGL 841
Query: 122 TNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLVQ 181
T+ D + H+ S + ++K + S+AF FW ++Q + +D++ E + L
Sbjct: 842 TD---DLMYEPHLSSAFTAYKPKALQSQAFNNFWNSLQIWPRKRDLVKQCEVGLPVQLRA 898
Query: 182 AGFHYQTVFNTIQADASG-MLYPDFSYYNPTSILKNRVPFIKVKTIAANEGLTP 234
AG ++++ +A+G +L+ D+ + I ++ PF+KV + N P
Sbjct: 899 AGVKLESLYT---HNANGNVLHYDWKHL----IEQSGFPFLKVSLLRDNPTKQP 945
>gi|153898672|ref|ZP_02019238.1| Lipopolysaccharide biosynthesis protein-like protein
[Methylobacterium extorquens PA1]
gi|151590761|gb|EDN54169.1| Lipopolysaccharide biosynthesis protein-like protein
[Methylobacterium extorquens PA1]
Length = 916
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/248 (29%), Positives = 111/248 (44%), Gaps = 25/248 (10%)
Query: 279 SLPDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQ---A 335
S P KK A +H FY +L+ E L +F D++++TD KK +I+ + GK+
Sbjct: 245 SHPYKKAAAIVHGFYPELMEEILIYLGKSNFPIDIYVSTDDSKKAEQIISM--GKKYHNG 302
Query: 336 KAEVFVTGNVGRDVLPMLK-LKRHLSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVH 394
+ +V + N GRD+ PML Y+ H HTKKS SWR L L+
Sbjct: 303 QLDVRIISNRGRDIGPMLTGFSDVFDNYEAFLHIHTKKSPHGGD-GLSSWRDYLFKNLIG 361
Query: 395 PADQIVSQ---LGQDDCLGLVIADIPSFFRFNRIVVAW--NEALISPEMNKLWERMNCQK 449
A+ I S LG + +G V P R ++ W N +S + ++ R++
Sbjct: 362 SAEIIDSNLHILGTRN-VGFV---YPQHLYALRGILNWGYNFDTVSSLLRRVGVRLSKDM 417
Query: 450 EVDFKQMNTFVMSYGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQNSIL-HAIERLLVYI 508
++F G+ W + AL L L++ ED +E + L HAIER +Y
Sbjct: 418 VLEFPS--------GSMFWARTAALHGLLSLDLKLEDFDNEAGQVDGTLGHAIERSFLYF 469
Query: 509 AWDKQYDF 516
A Y +
Sbjct: 470 AETSGYSW 477
>gi|21109952|gb|AAM38419.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 296
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 19/224 (8%)
Query: 287 VHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVG 346
V LH +Y+D+L E L A S L +TTD + ++ L+ + +A+V N G
Sbjct: 51 VVLHAWYLDVLDEALDAIADCGLSLRLVVTTDITMVE-QVRQRLQQRGVQAQVDGFENRG 109
Query: 347 RDVLPMLKLKRHL--SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHP--ADQIVSQ 402
RD+LP L++ L + HTKKS + G++WR+E+ + L+ P AD I+
Sbjct: 110 RDILPFLRVANRLLDEGEQVVLKLHTKKSTHRE--DGDAWRREMFSALLTPQHADAIMRG 167
Query: 403 LGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMS 462
D LGL A + +AL + + + D ++ V +
Sbjct: 168 FTDDPLLGLA-APAQHLLPVTDFIGGNADAL---------DYLAVRTGTDAIDEHS-VFA 216
Query: 463 YGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQNSIL-HAIERLL 505
G+ W K +AL PL D N+ + +E + L HAIER L
Sbjct: 217 SGSMFWVKLEALRPLLDANLHPSEFENEQGQIDGTLAHAIERFL 260
>gi|55846839|gb|AAV67425.1| glycosyltransferase [Xanthomonas oryzae pv. oryzicola]
gi|60393672|gb|AAX19603.1| WxocC [Xanthomonas oryzae pv. oryzicola]
gi|60393675|gb|AAX19605.1| WxocC [Xanthomonas oryzae pv. oryzicola]
gi|60393678|gb|AAX19607.1| WxocC [Xanthomonas oryzae pv. oryzicola]
gi|60393681|gb|AAX19609.1| WxocC [Xanthomonas oryzae pv. oryzicola]
gi|60393684|gb|AAX19611.1| WxocC [Xanthomonas oryzae pv. oryzicola]
gi|60393687|gb|AAX19613.1| WxocC [Xanthomonas oryzae pv. oryzicola]
gi|60393690|gb|AAX19615.1| WxocC [Xanthomonas oryzae pv. oryzae]
gi|60393693|gb|AAX19617.1| WxocC [Xanthomonas oryzae pv. oryzae]
gi|60393699|gb|AAX19622.1| putative lipopolysaccharide biosynthesis protein [Xanthomonas
oryzae]
gi|60393703|gb|AAX19625.1| WxocC [Xanthomonas oryzae pv. oryzae]
gi|60393708|gb|AAX19629.1| WxocC [Xanthomonas oryzae pv. oryzae]
gi|60393712|gb|AAX19632.1| WxocC [Xanthomonas oryzae pv. oryzae]
gi|60393715|gb|AAX19634.1| WxocC [Xanthomonas oryzae pv. oryzae]
Length = 190
Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 97/182 (53%), Gaps = 12/182 (6%)
Query: 3 RLLLYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLLRK 62
R+ + HF+ ++E L+++ +++ +S ++++ +Q L + + V++R+
Sbjct: 9 RVAVVAHFDAEGLLTEFTRRLLDELLLHAERIVLVS-TRLAYEQATGLDQRIT--VIVRE 65
Query: 63 NIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNV--DFWG 120
N+G+DF ++R G+ V E L YD + + ND+ D I + F R+V D WG
Sbjct: 66 NVGYDFYSFRTGIFAV--EALYSYDELIIANDSVV--TIDQGGIGKAFAQMRDVECDVWG 121
Query: 121 MTNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLV 180
MT + + H+QSY+L F+++ + F FW+N++ + ++I YE +T L+
Sbjct: 122 MT---ESLQVSRHLQSYFLVFRKSAFFTHYFDRFWRNVRVLDDKWEIILSYEVGLTQWLL 178
Query: 181 QA 182
+
Sbjct: 179 SS 180
>gi|77748730|ref|NP_643883.2| hypothetical protein XAC3576 [Xanthomonas axonopodis pv. citri str.
306]
Length = 546
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 19/224 (8%)
Query: 287 VHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVG 346
V LH +Y+D+L E L A S L +TTD + ++ L+ + +A+V N G
Sbjct: 301 VVLHAWYLDVLDEALDAIADCGLSLRLVVTTDITMVE-QVRQRLQQRGVQAQVDGFENRG 359
Query: 347 RDVLPMLKLKRHL--SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHP--ADQIVSQ 402
RD+LP L++ L + HTKKS + G++WR+E+ + L+ P AD I+
Sbjct: 360 RDILPFLRVANRLLDEGEQVVLKLHTKKSTHRE--DGDAWRREMFSALLTPQHADAIMRG 417
Query: 403 LGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMS 462
D LGL A + +AL + + + D ++ V +
Sbjct: 418 FTDDPLLGLA-APAQHLLPVTDFIGGNADAL---------DYLAVRTGTDAIDEHS-VFA 466
Query: 463 YGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQNSIL-HAIERLL 505
G+ W K +AL PL D N+ + +E + L HAIER L
Sbjct: 467 SGSMFWVKLEALRPLLDANLHPSEFENEQGQIDGTLAHAIERFL 510
>gi|21759464|sp|O34262|WXCX_XANCP Uncharacterized protein wxcX
gi|21111631|gb|AAM39945.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575237|gb|AAY50647.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 296
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 67/238 (28%), Positives = 101/238 (42%), Gaps = 21/238 (8%)
Query: 273 DLSLPISLPDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEG 332
D++ I P V LH +Y+D+L E L A + ITTD K E+ ++
Sbjct: 39 DVATEICSPSA--CVVLHAWYLDVLDEMLDAIVECGTPLRIIITTDLTKVI-EVTKCIQR 95
Query: 333 KQAKAEVFVTGNVGRDVLPMLKLKRHL--SQYDYIGHFHTKKSKEADYWAGESWRKELIN 390
+ +AEV N GRD+LP L + L + HTKKS D G +WR E++
Sbjct: 96 RGIQAEVEGFENRGRDILPFLHVANRLLDENVQLVLKLHTKKSTHRD--DGNAWRGEMLT 153
Query: 391 MLVHP--ADQIVSQLGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQ 448
L+ P D IV+ D GL + + +AL + + +
Sbjct: 154 ALLGPQRVDAIVNAFSTDPLAGLAAPE-DHLLPVTEFIGGNADAL---------DYLTVR 203
Query: 449 KEVDFKQMNTFVMSYGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQNSIL-HAIERLL 505
D N+ S G+ W + +AL PL D ++ + SE + L HAIER +
Sbjct: 204 TGSDAPDTNSLFAS-GSMFWARLEALRPLLDAHLHASEFESEQGQIDGTLAHAIERFV 260
>gi|77747764|ref|NP_636021.2| hypothetical protein XCC0629 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|77761299|ref|YP_244667.2| hypothetical protein XC_3605 [Xanthomonas campestris pv. campestris
str. 8004]
Length = 546
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 67/238 (28%), Positives = 101/238 (42%), Gaps = 21/238 (8%)
Query: 273 DLSLPISLPDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEG 332
D++ I P V LH +Y+D+L E L A + ITTD K E+ ++
Sbjct: 289 DVATEICSPSA--CVVLHAWYLDVLDEMLDAIVECGTPLRIIITTDLTKVI-EVTKCIQR 345
Query: 333 KQAKAEVFVTGNVGRDVLPMLKLKRHL--SQYDYIGHFHTKKSKEADYWAGESWRKELIN 390
+ +AEV N GRD+LP L + L + HTKKS D G +WR E++
Sbjct: 346 RGIQAEVEGFENRGRDILPFLHVANRLLDENVQLVLKLHTKKSTHRD--DGNAWRGEMLT 403
Query: 391 MLVHP--ADQIVSQLGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQ 448
L+ P D IV+ D GL + + +AL + + +
Sbjct: 404 ALLGPQRVDAIVNAFSTDPLAGLAAPE-DHLLPVTEFIGGNADAL---------DYLTVR 453
Query: 449 KEVDFKQMNTFVMSYGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQNSIL-HAIERLL 505
D N+ S G+ W + +AL PL D ++ + SE + L HAIER +
Sbjct: 454 TGSDAPDTNSLFAS-GSMFWARLEALRPLLDAHLHASEFESEQGQIDGTLAHAIERFV 510
>gi|71735705|ref|YP_273244.1| hypothetical protein PSPPH_0972 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71556258|gb|AAZ35469.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 1262
Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 23/242 (9%)
Query: 279 SLPDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSE---KKKNEILGILEGKQA 335
S+ D +I V+LH++Y DLL + ++DLFI+T E KK +I+
Sbjct: 206 SIEDMRIGVYLHLYYTDLLGAISKHLNNIPLAFDLFISTPHELDHKKLRKIVSDSVTNVK 265
Query: 336 KAEVFVTGNVGRDVLP-MLKLKRHLSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVH 394
+ + N GRD+ P +++ L YD I H HTKKS+ + W ++++ L+
Sbjct: 266 EISIKHVPNRGRDIAPFIIEFGNELQAYDAICHIHTKKSEHTKGLS--DWGDDILSSLLG 323
Query: 395 PADQIVSQLGQDDCLGLVIADIPSFF-----RFNRIVVAWNEALISPEMNKLWERMNCQK 449
+ + L L+ D + + + W+E + E+ K ++
Sbjct: 324 SREDV------KKILTLLKGDAKIIYPEGQNYYMKDPTGWSE---NHEIAK--HILSDHL 372
Query: 450 EVDFKQMNTFVMSYGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQNSIL-HAIERLLVYI 508
E D G+ W + + + ++ + ED P EP+P + L HA+ER+++
Sbjct: 373 ETDISNFPKAEFPEGSMFWARQEGIQSFLNIPLDWEDFPEEPIPTDGTLAHALERIILIS 432
Query: 509 AW 510
A+
Sbjct: 433 AY 434
>gi|58425017|gb|AAW74054.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 727
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 287 VHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVG 346
V LH +Y+D+L E L A S L +TTD ++ L+ + +A+V N G
Sbjct: 482 VVLHAWYLDVLDEALDALAHCGLSLRLVVTTDI-TMVTQVRQCLQQRGLQAQVEGFENRG 540
Query: 347 RDVLPMLKLKRHL--SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPAD--QIVSQ 402
RD+LP L++ L + HTKKS + G++WR+++++ L+ P IV
Sbjct: 541 RDILPFLRVANRLLDEGEQVVLKLHTKKSTHRE--DGDTWRRDMLSGLLAPQHVAAIVRG 598
Query: 403 LGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMS 462
+D LGLV A + +AL + + + D ++ S
Sbjct: 599 FAEDPLLGLV-APAQHLLPVTDFMGGNADAL---------DYLTVRTGTDAINAHSLFAS 648
Query: 463 YGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQNSIL-HAIERLL 505
G+ W K +AL PL D ++ + SE + L HAIER L
Sbjct: 649 -GSMFWVKLEALRPLLDAHLHPSEFESEQGQIDGTLAHAIERFL 691
>gi|84622385|ref|YP_449757.1| hypothetical protein XOO_0728 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84366325|dbj|BAE67483.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 695
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 287 VHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVG 346
V LH +Y+D+L E L A S L +TTD ++ L+ + +A+V N G
Sbjct: 450 VVLHAWYLDVLDEALDALAHCGLSLRLVVTTDI-TMVTQVRQCLQQRGLQAQVEGFENRG 508
Query: 347 RDVLPMLKLKRHL--SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPAD--QIVSQ 402
RD+LP L++ L + HTKKS + G++WR+++++ L+ P IV
Sbjct: 509 RDILPFLRVANRLLDEGEQVVLKLHTKKSTHRE--DGDTWRRDMLSGLLAPQHVAAIVRG 566
Query: 403 LGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMS 462
+D LGLV A + +AL + + + D ++ S
Sbjct: 567 FAEDPLLGLV-APAQHLLPVTDFMGGNADAL---------DYLTVRTGTDAINAHSLFAS 616
Query: 463 YGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQNSIL-HAIERLL 505
G+ W K +AL PL D ++ + SE + L HAIER L
Sbjct: 617 -GSMFWVKLEALRPLLDAHLHPSEFESEQGQIDGTLAHAIERFL 659
>gi|122879048|ref|YP_199439.6| hypothetical protein XOO0800 [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 546
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 287 VHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNVG 346
V LH +Y+D+L E L A S L +TTD ++ L+ + +A+V N G
Sbjct: 301 VVLHAWYLDVLDEALDALAHCGLSLRLVVTTDI-TMVTQVRQCLQQRGLQAQVEGFENRG 359
Query: 347 RDVLPMLKLKRHL--SQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPAD--QIVSQ 402
RD+LP L++ L + HTKKS + G++WR+++++ L+ P IV
Sbjct: 360 RDILPFLRVANRLLDEGEQVVLKLHTKKSTHRE--DGDTWRRDMLSGLLAPQHVAAIVRG 417
Query: 403 LGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMS 462
+D LGLV A + +AL + + + D ++ S
Sbjct: 418 FAEDPLLGLV-APAQHLLPVTDFMGGNADAL---------DYLTVRTGTDAINAHSLFAS 467
Query: 463 YGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQNSIL-HAIERLL 505
G+ W K +AL PL D ++ + SE + L HAIER L
Sbjct: 468 -GSMFWVKLEALRPLLDAHLHPSEFESEQGQIDGTLAHAIERFL 510
>gi|60393677|gb|AAX19606.1| WxocB [Xanthomonas oryzae pv. oryzicola]
Length = 297
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 19/238 (7%)
Query: 284 KIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTG 343
+ A+ LH+F++DL+ + YD+F++ S + + + + +A VF+
Sbjct: 47 RFAIVLHLFHIDLIDAICAYMRNVIVDYDVFVSVKSISDRRMAVRYFQEHKIRASVFIHP 106
Query: 344 NVGRDVLPMLKLKRH--LSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVS 401
N+GRDV P + L L +YD + H+KKS D G WR +L+ L+ + ++
Sbjct: 107 NIGRDVGPFISLLNTGLLDRYDAVCKIHSKKSVYRD--GGGQWRDDLMKALLGSSFDVLR 164
Query: 402 QL-GQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFV 460
L DD I S + N NE + + + ++ K++
Sbjct: 165 VLRAFDDHPACGIVGPESAYLSNARFWGGNEERL--------RVLAAETGIEEKRIRLGF 216
Query: 461 MSYGTFVWFKYDALSPL--FDLNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDF 516
+ GT WF+ ALS L + ++E D P ++ H IERL ++ W +Q F
Sbjct: 217 FA-GTMFWFRPAALSALRARSIGLSEFD-PEAGQRDATLAHVIERL--FVLWVEQAGF 270
>gi|16519756|ref|NP_443876.1| Y4gN [Rhizobium sp. NGR234]
gi|2496637|sp|P55470|Y4GN_RHISN Uncharacterized protein y4gN
gi|2182417|gb|AAB91688.1| Y4gN [Rhizobium sp. NGR234]
Length = 383
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 18 EHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLLRKNIGFDFAAWRDGMKK 77
E + QLE + V+ +SN K+ + + L E ++ RKNIG+DF +RDG+
Sbjct: 94 ESLFLQLEHLLSKGLGVVIVSNRKVLEHDRNRLS-EYCHLIIERKNIGYDFGGYRDGILA 152
Query: 78 VGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFE-VDR----NVDFWGMTNYRKDK-DFN 131
+ + S+ +MND+ + P I +D + +DR D G+ K K N
Sbjct: 153 LHKRSIHP-KSLFVMNDSVWFP------IRKDCDLIDRCRESRSDIVGVFYNNKSKFPKN 205
Query: 132 EHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLVQAGFHYQTVF 190
H+QSY+ F + VV+ F +W+ I + + ++VI + E ++T N GF +++
Sbjct: 206 HHLQSYFYRFGEKVVSDSRFLAYWRKIPMYNDKRNVIRNLEIKLTKNFQLMGFGISSLY 264
>gi|60393714|gb|AAX19633.1| WxocB [Xanthomonas oryzae pv. oryzae]
Length = 297
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 19/238 (7%)
Query: 284 KIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTG 343
+ A+ LH+F++DL+ + YD+F++ S + + + + +A VF+
Sbjct: 47 RFAIVLHLFHIDLIDAICAYMRNVIVDYDVFVSVKSISDRRMAVRYFQEHKIRASVFIHP 106
Query: 344 NVGRDVLPMLKLKRH--LSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVS 401
N+GRDV P + L L +YD + H+KKS D G WR +L+ L+ + ++
Sbjct: 107 NIGRDVGPFISLLNTGLLDRYDAVCKIHSKKSVYHD--GGGQWRDDLMKALLGSSFDVLK 164
Query: 402 QL-GQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFV 460
L DD I S + N NE + + + ++ K++
Sbjct: 165 VLRAFDDHPACGIVGPESAYLSNARFWGGNEERL--------RVLAAETGIEEKRIRLGF 216
Query: 461 MSYGTFVWFKYDALSPL--FDLNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDF 516
+ GT WF+ ALS L + ++E D P ++ H IERL ++ W +Q F
Sbjct: 217 FA-GTMFWFRPAALSALRARSIGLSEFD-PEAGQRDATLAHVIERL--FVLWVEQAGF 270
>gi|60393683|gb|AAX19610.1| WxocB [Xanthomonas oryzae pv. oryzicola]
gi|60393686|gb|AAX19612.1| WxocB [Xanthomonas oryzae pv. oryzicola]
Length = 297
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 19/238 (7%)
Query: 284 KIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTG 343
+ A+ LH+F++DL+ + YD+F++ S + + + + +A VF+
Sbjct: 47 RFAIVLHLFHIDLIDAICAYMRNVIVDYDVFVSVKSISDRRMAVRYFQEHKIRASVFIHP 106
Query: 344 NVGRDVLPMLKLKRH--LSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVS 401
N+GRDV P + L L +YD + H+KKS D G WR +L+ L+ + ++
Sbjct: 107 NIGRDVGPFISLLNTGLLDRYDAVCKIHSKKSVYHD--GGGQWRDDLMKALLGSSFDVLR 164
Query: 402 QL-GQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFV 460
L DD I S + N NE + + + ++ K++
Sbjct: 165 VLRAFDDHPACGIVGPESAYLSNARFWGGNEERL--------RVLAAETGIEEKRIRLGF 216
Query: 461 MSYGTFVWFKYDALSPL--FDLNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDF 516
+ GT WF+ ALS L + ++E D P ++ H IERL ++ W +Q F
Sbjct: 217 FA-GTMFWFRPAALSALRARSIGLSEFD-PEAGQRDATLAHVIERL--FVLWVEQAGF 270
>gi|60393680|gb|AAX19608.1| WxocB [Xanthomonas oryzae pv. oryzicola]
Length = 297
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 19/238 (7%)
Query: 284 KIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTG 343
+ A+ LH+F++DL+ + YD+F++ S + + + + +A VF+
Sbjct: 47 RFAIVLHLFHIDLIDAICAYMRNVIVDYDVFVSVKSISDRRMAVRYFQEHKIRASVFIHP 106
Query: 344 NVGRDVLPMLKLKRH--LSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVS 401
N+GRDV P + L L +YD + H+KKS D G WR +L+ L+ + ++
Sbjct: 107 NIGRDVGPFISLLNTGLLDRYDAVCKVHSKKSVYHD--GGGQWRDDLMKALLGSSFNVLR 164
Query: 402 QL-GQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFV 460
L DD I S + N NE + + + ++ K++
Sbjct: 165 VLRAFDDHPACGIVGPESAYLSNARFWGGNEERL--------RVLAAETGIEEKRIRLGF 216
Query: 461 MSYGTFVWFKYDALSPL--FDLNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDF 516
+ GT WF+ ALS L + ++E D P ++ H IERL ++ W +Q F
Sbjct: 217 FA-GTMFWFRPAALSALRARSIGLSEFD-PEAGQRDATLAHVIERL--FVLWVEQAGF 270
>gi|55846840|gb|AAV67426.1| glycosyltransferase [Xanthomonas oryzae pv. oryzicola]
gi|60393671|gb|AAX19602.1| WxocB [Xanthomonas oryzae pv. oryzicola]
gi|60393674|gb|AAX19604.1| WxocB [Xanthomonas oryzae pv. oryzicola]
gi|60393692|gb|AAX19616.1| WxocB [Xanthomonas oryzae pv. oryzae]
gi|60393697|gb|AAX19620.1| WxocB [Xanthomonas oryzae]
gi|60393707|gb|AAX19628.1| WxocB [Xanthomonas oryzae pv. oryzae]
gi|60393711|gb|AAX19631.1| WxocB [Xanthomonas oryzae pv. oryzae]
Length = 297
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 19/238 (7%)
Query: 284 KIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTG 343
+ A+ LH+F++DL+ + YD+F++ S + + + + +A VF+
Sbjct: 47 RFAIVLHLFHIDLIDAICAYMRNVIVDYDVFVSVKSISDRRMAVRYFQEHKIRASVFIHP 106
Query: 344 NVGRDVLPMLKLKRH--LSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVS 401
N+GRDV P + L L +YD + H+KKS D G WR +L+ L+ + ++
Sbjct: 107 NIGRDVGPFISLLNTGLLDRYDAVCKIHSKKSVYHD--GGGQWRDDLMKALLGSSFDVLR 164
Query: 402 QL-GQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFV 460
L DD I S + N NE + + + ++ K++
Sbjct: 165 VLRAFDDHPACGIVGPESAYLSNARFWGGNEERL--------RVLAAETGIEEKRIRLGF 216
Query: 461 MSYGTFVWFKYDALSPL--FDLNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDF 516
+ GT WF+ ALS L + ++E D P ++ H IERL ++ W +Q F
Sbjct: 217 FA-GTMFWFRPAALSALRARSIGLSEFD-PEAGQRDATLAHVIERL--FVLWVEQAGF 270
>gi|60393702|gb|AAX19624.1| WxocB [Xanthomonas oryzae pv. oryzae]
Length = 297
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 19/238 (7%)
Query: 284 KIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTG 343
+ A+ LH+F++DL+ + YD+F++ S + + + + +A VF+
Sbjct: 47 RFAIVLHLFHIDLIDAICAYMRNVIVDYDVFVSVKSISDRRMAVRYFQEHKIRASVFIHP 106
Query: 344 NVGRDVLPMLKLKRH--LSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVS 401
N+GRDV P + L L +YD + H+KKS D G WR +L+ L+ + ++
Sbjct: 107 NIGRDVGPFISLLNTGLLDRYDAVCKIHSKKSVYHD--GGGQWRDDLMKALLGSSFDVLR 164
Query: 402 QL-GQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFV 460
L DD I S + N NE + + + ++ K++
Sbjct: 165 VLRAFDDHPACGIVGPESAYLSNARFWGGNEERL--------RVLAAETGIEEKRIRLGF 216
Query: 461 MSYGTFVWFKYDALSPL--FDLNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDF 516
+ GT WF+ ALS L + ++E D P ++ H IERL ++ W +Q F
Sbjct: 217 FA-GTMFWFRPAALSALRARSIGLSEFD-PEAGQRDATLAHVIERL--FVLWVEQAGF 270
>gi|84357057|ref|ZP_00981887.1| COG0438: Glycosyltransferase [Burkholderia cenocepacia PC184]
Length = 1074
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 15/223 (6%)
Query: 6 LYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLLRKNIG 65
L+V + ++ HV + +R V I + + D L + VD +++R+N+G
Sbjct: 423 LFVTHSPDGKLKPHVRPYISALRRQGIDVTLIVAADSAWFDSDALPLDEVDTLVVRENLG 482
Query: 66 FDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWD--LEHIYQDFEVDRNVDFWGMTN 123
DFAAW M+ EL +++ L+ND+ GP D E + + D G+T
Sbjct: 483 LDFAAWAHVMQLE--PELFDAEALYLLNDSLIGPFNDASFEKMLARLRSE-PADMVGLT- 538
Query: 124 YRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLVQAG 183
+ + H+QS++L+ ++ + S Q F+ N+ DVI YE + L G
Sbjct: 539 --ESWEHQWHVQSFFLALRRRALASPILQDFFSNVVILPTKDDVIQRYEITLAPTLRDGG 596
Query: 184 FHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTI 226
+ +F + + + F + N ++ + PF+KV +
Sbjct: 597 ISHAVLFPSANHNNRTL----FDWKN---LIDDGFPFVKVMAL 632
>gi|124870915|gb|EAY62631.1| Glycosyl transferase [Burkholderia cenocepacia PC184]
Length = 1087
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 15/223 (6%)
Query: 6 LYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLLRKNIG 65
L+V + ++ HV + +R V I + + D L + VD +++R+N+G
Sbjct: 436 LFVTHSPDGKLKPHVRPYISALRRQGIDVTLIVAADSAWFDSDALPLDEVDTLVVRENLG 495
Query: 66 FDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWD--LEHIYQDFEVDRNVDFWGMTN 123
DFAAW M+ EL +++ L+ND+ GP D E + + D G+T
Sbjct: 496 LDFAAWAHVMQLE--PELFDAEALYLLNDSLIGPFNDASFEKMLARLRSE-PADMVGLT- 551
Query: 124 YRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLVQAG 183
+ + H+QS++L+ ++ + S Q F+ N+ DVI YE + L G
Sbjct: 552 --ESWEHQWHVQSFFLALRRRALASPILQDFFSNVVILPTKDDVIQRYEITLAPTLRDGG 609
Query: 184 FHYQTVFNTIQADASGMLYPDFSYYNPTSILKNRVPFIKVKTI 226
+ +F + + + F + N ++ + PF+KV +
Sbjct: 610 ISHAVLFPSANHNNRTL----FDWKN---LIDDGFPFVKVMAL 645
>gi|146279467|ref|YP_001169625.1| hypothetical protein Rsph17025_3443 [Rhodobacter sphaeroides ATCC
17025]
gi|145557708|gb|ABP72320.1| hypothetical protein Rsph17025_3443 [Rhodobacter sphaeroides ATCC
17025]
Length = 823
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 286 AVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTGNV 345
A+H+H FY D LA + + +F + + ITTD+E+K +EI + + EV + N
Sbjct: 591 ALHVHAFYTDDLAADVRSHRAFRLARRIVITTDNERKASEIRTRMGAEGLYPEVILVPNR 650
Query: 346 GRDVLPMLKL---KRHLSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVSQ 402
GRD+LP ++L + + H H KKS A +G+ WR L+ +L+ +
Sbjct: 651 GRDILPFMQLFLPGGPAGKDEIWCHLHQKKSL-ATSDSGDVWRAFLLRILLGDDAGLSDA 709
Query: 403 LG--QDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFV 460
+G +D +GLV F+ V W+ + L R + N +
Sbjct: 710 VGHLRDPAVGLVAP-------FDPYHVPWDAS------RALLPRFAPRLPGPLPD-NPLL 755
Query: 461 MSYGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQNSI-LHAIERL 504
G W + + + DL P+EP+ + H +ERL
Sbjct: 756 FPVGNMFWVRAGVVRAMNDLFGPSYPWPNEPIANDGTEFHLVERL 800
>gi|88808074|ref|ZP_01123585.1| Glycosyl transferase, group 1 [Synechococcus sp. WH 7805]
gi|88788113|gb|EAR19269.1| Glycosyl transferase, group 1 [Synechococcus sp. WH 7805]
Length = 512
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 78/275 (28%), Positives = 113/275 (41%), Gaps = 36/275 (13%)
Query: 262 DYPYLLGRKILDLSLPISLPDK-------KIAVHLHVFYVDLLAEFLHAFESFHFSYDLF 314
DY + + L P D KI V +H +Y + LA + +DL
Sbjct: 21 DYFEYINHPLTSLCFPCKTDDPESLGHPLKILVVIHAYYPESLATIFPSLRHMPCHFDLV 80
Query: 315 ITTDSEKKKNEILGILEGKQAKAEVF---VTGNVGRDVLPMLK----LKRHLSQYDYIGH 367
+T S K + LE +V V N+GRD+LP ++ LK YD++
Sbjct: 81 VTVCSCGDKEVVKEYLEKVDLPIDVLDIKVLTNLGRDLLPFVQVIKGLKLQNKAYDFVLK 140
Query: 368 FHTKK---SKEADYWAGESWRKELINMLVHPAD--QIVSQLGQDDCLGLVIADIP-SFFR 421
HTK+ S + + G+ L N+L P + I+ +L Q LV I FR
Sbjct: 141 LHTKRSVASSKGKEFGGKWLEGSLSNLLGSPENVKYILLELLQTTNCALVSPLISLDVFR 200
Query: 422 FNRIVVAW--NEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPLFD 479
F + W N A IS +++ R + + + F G+ W + A + L
Sbjct: 201 FCK----WKNNLAPISHLLDRFGVRESPEDFICFPA--------GSMFWVDFKA-AVLIA 247
Query: 480 LNMTEEDVPSEPLPQN-SILHAIERLLVYIAWDKQ 513
E VP EPLP N S LHA ERL+ YI Q
Sbjct: 248 SCFEESRVPPEPLPSNGSYLHAFERLVPYILESTQ 282
>gi|60393689|gb|AAX19614.1| WxocB [Xanthomonas oryzae pv. oryzae]
Length = 297
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 19/238 (7%)
Query: 284 KIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTG 343
+ A+ LH+F++DL+ + YD+F++ S + + + + +A V +
Sbjct: 47 RFAIVLHLFHIDLIDAICAYMRNVIVDYDVFVSVKSISDRRMAVRYFQEHKIRASVSIHP 106
Query: 344 NVGRDVLPMLKLKRH--LSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPADQIVS 401
N+GRDV P + L L +YD + H+KKS D G WR +L+ L+ + ++
Sbjct: 107 NIGRDVGPFISLLNTGLLDRYDAVCKIHSKKSVYHD--GGGQWRDDLMKALLGSSFDVLR 164
Query: 402 QL-GQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFV 460
L DD I S + N NE + + + ++ K++
Sbjct: 165 VLRAFDDHPACGIVGPESAYLSNARFWGGNEERL--------RVLAAETGIEEKRIRLGF 216
Query: 461 MSYGTFVWFKYDALSPL--FDLNMTEEDVPSEPLPQNSILHAIERLLVYIAWDKQYDF 516
+ GT WF+ ALS L + ++E D P ++ H IERL ++ W +Q F
Sbjct: 217 FA-GTMFWFRPAALSALRARSIGLSEFD-PEAGQRDATLAHVIERL--FVLWVEQAGF 270
>gi|148556910|ref|YP_001264492.1| glycosyl transferase, group 1 [Sphingomonas wittichii RW1]
gi|148502100|gb|ABQ70354.1| glycosyl transferase, group 1 [Sphingomonas wittichii RW1]
Length = 1386
Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 30/227 (13%)
Query: 6 LYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEV---LLRK 62
L+V ++ +I +VL + +R V ++ + D+ +L EL+D V ++R+
Sbjct: 256 LFVTHSRSGKIKPNVLPYVRALRQAGLAVFLVA----TVDRPVDLPAELLDSVDAAMVRR 311
Query: 63 NIGFDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRN-VDFWGM 121
N G+DFAAW +K L ++ L+ND+ D V R+ D G+
Sbjct: 312 NAGYDFAAWAHALKL--HPRLYGAATLYLVNDSVVPAADDARIAAIVDRVRRSGADLIGL 369
Query: 122 TNYRKDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLVQ 181
T + ++ H+QSY+L+ K ++ S +F F +++ T VI YE ++ +
Sbjct: 370 T---ESHEWRWHVQSYFLAIKPGLLASRSFHGFMDDVRLLTRKDHVIRAYEVRLAEIAEE 426
Query: 182 AGFHYQTVFNTIQADASGMLYPDFSYYNPT-----SILKNRVPFIKV 223
AG + +L+P + NPT +L +PF+KV
Sbjct: 427 AGRSVE------------ILFPSATAINPTLFGWRGLLGQGMPFVKV 461
>gi|83950907|ref|ZP_00959640.1| hypothetical protein ISM_07395 [Roseovarius nubinhibens ISM]
gi|83838806|gb|EAP78102.1| hypothetical protein ISM_07395 [Roseovarius nubinhibens ISM]
Length = 752
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/142 (33%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 281 PDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVF 340
P + A+H H++Y DL EF F+ DL+IT ++ L E + F
Sbjct: 129 PKARFALHAHIYYPDLWPEFATRFDEIGDGIDLYITLTWRGEETRWLAD-EITERFPRAF 187
Query: 341 VT--GNVGRDVLPMLKLKR--HLSQYDYIGHFHTKKSKEADYWAGESWRKELINMLVHPA 396
VT N GRD+LP L L YD + HTKKS D G+ WR+ LI+ ++ PA
Sbjct: 188 VTPVPNRGRDILPFLLLANAGAFDGYDALCKIHTKKSPHRD--DGDQWRRHLIDGVL-PA 244
Query: 397 DQIVSQLGQ---DDCLGLVIAD 415
+ +L DD +AD
Sbjct: 245 TGLQERLQHFLADDAAAFWVAD 266
>gi|77404644|ref|YP_345218.1| possible glycosyltransferase [Rhodobacter sphaeroides 2.4.1]
gi|77390294|gb|ABA81477.1| possible glycosyltransferase [Rhodobacter sphaeroides 2.4.1]
Length = 793
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 284 KIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVTG 343
+ ++H+H FY D LA+ + ++ + + +TTDS++K +EI ++ EV V
Sbjct: 587 RFSLHVHAFYTDDLAQDVRRHAAYRCASRIVVTTDSDRKADEIRTLMAAVGLAPEVLVRP 646
Query: 344 NVGRDVLPMLKL---KRHLSQYDYIGHFHTKKSKEADYWAGESWRKELINMLV 393
N GRD+LP L+L + + H H KKS A +G+ WR L+ +L+
Sbjct: 647 NRGRDILPFLQLFLPGGAAGEDEIWCHLHQKKSL-ATTDSGDIWRAFLLRILL 698
>gi|153009780|ref|YP_001370995.1| Lipopolysaccharide biosynthesis protein-like protein [Ochrobactrum
anthropi ATCC 49188]
gi|151561668|gb|ABS15166.1| Lipopolysaccharide biosynthesis protein-like protein [Ochrobactrum
anthropi ATCC 49188]
Length = 418
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 6/187 (3%)
Query: 6 LYVHFNKFNQISEHVLYQLEKMRPLFRKVIFISNSKISQDQEDELKKELVDEVLLRKNIG 65
+ V +NKF ++ L+ L ++R I + N ++SQ + D +K + VL+R+NIG
Sbjct: 51 IVVKYNKFG-VTPDFLHLLNELRHQNINPIVVCNGRLSQPEHDAIKA-VAQRVLVRQNIG 108
Query: 66 FDFAAWRDGMKKVGFEELKKYDSVTLMNDTCFGPLWDLEHIYQDFEVDRNVDFWGMTNYR 125
DF A+R +G E L+ + + + P L ++ D D G TN
Sbjct: 109 RDFGAYRAATLLLGAEGLQLRRLLYFNDSIMYVPGAGLRNMIASL-ADSAYDVVG-TN-- 164
Query: 126 KDKDFNEHIQSYYLSFKQNVVNSEAFQLFWQNIQDFTEVQDVIDHYETQVTTNLVQAGFH 185
++ +F H+ SY S V N A + FW + + I E ++ V+ G++
Sbjct: 165 ENHEFIHHVGSYAFSVSGKVFNDAAVRRFWSRYRPYDIRPHAIRKGEVALSECFVRCGYN 224
Query: 186 YQTVFNT 192
+++T
Sbjct: 225 IDVLYST 231
>gi|109648359|ref|ZP_01372262.1| Lipopolysaccharide biosynthesis protein-like [Desulfitobacterium
hafniense DCB-2]
gi|109641449|gb|EAT51004.1| Lipopolysaccharide biosynthesis protein-like [Desulfitobacterium
hafniense DCB-2]
Length = 241
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 11/119 (9%)
Query: 284 KIAVHLHVFYVDLLAEFLHAFESF-HFSYDLFITTDSEKKKNEILGILEGKQAKAEVFVT 342
KIAV +H++YV++ E ++F SYDL+ T E K L +L+G+ A+V VT
Sbjct: 3 KIAVCVHLYYVEMFQEITFYLDNFCDISYDLYFTIPQENKV--FLPVLKGRYPHAKVIVT 60
Query: 343 GNVGRDVLPMLKLKR--HLSQYDYIGHFHTKK------SKEADYWAGESWRKELINMLV 393
NVG D+ P L + +L YD + H+KK S+ +G WR + L+
Sbjct: 61 DNVGFDIYPFLCFLKEINLDYYDVVFKLHSKKDIPIEFSRNGVDLSGSKWRDYMFQALM 119
>gi|78184210|ref|YP_376645.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
CC9902]
gi|78168504|gb|ABB25601.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
CC9902]
Length = 1161
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 18/243 (7%)
Query: 273 DLSLPISLPDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITT--DSEKKKNEILGIL 330
D L S+ KK V LH+FY +L D+ I+T D+ EI L
Sbjct: 191 DGKLISSIGQKKFGVFLHIFYPELAPIIADYIRKIPVKIDIHISTTHDAISGLTEIFKGL 250
Query: 331 EGKQAKAEVFVTGNVGRDVLP-MLKLKRHLSQYDYIGHFHTKKSKEADYWAGESWRKELI 389
E +V N+GRDV P ++ + + +YDYI H+KKS ++ +G W + +
Sbjct: 251 E-NSLNVQVKSFPNIGRDVAPFIVGFREEIPKYDYILKLHSKKSPHSNALSG--WFEHCL 307
Query: 390 NMLVHPADQIVSQLGQDDCLGLVIADIPSFFRFNRIVVAW---NEALISPEMNKLWERMN 446
+ L+ D + + + L DI + ++ +++ E +
Sbjct: 308 DNLIGSIDVFYTNIQE-----LNKEDISIVYPVENYALSLGIKHDSCWGHEDGNYNKAKT 362
Query: 447 CQKEVDFKQMN---TFVMSYGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQNSIL-HAIE 502
K++ +Q+N F+ G W K D L P+ D ++ ED +E + L H+IE
Sbjct: 363 LLKKLGLEQINRNSEFLFPTGNMFWCKPDILKPILDWDLKFEDFDNEGGQIDGTLAHSIE 422
Query: 503 RLL 505
RL+
Sbjct: 423 RLI 425
>gi|14090418|gb|AAK53494.1| putative methyltransferase [Xanthomonas campestris pv. campestris]
Length = 212
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 273 DLSLPISLPDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEG 332
D++ I P V LH +Y+D+L E L A + ITTD K E+ ++
Sbjct: 39 DVATEICSPSA--CVVLHAWYLDVLDEMLDAIVECGTPLRIIITTDLTKVI-EVTKCIQR 95
Query: 333 KQAKAEVFVTGNVGRDVLPMLKLKRHL--SQYDYIGHFHTKKSKEADYWAGESWRKELIN 390
+ +AEV N GRD+LP L + L + HTKKS D G +WR E++
Sbjct: 96 RGIQAEVEGFENRGRDILPFLHVANRLLDENVQLVLKLHTKKSTHRD--DGNAWRGEMLT 153
Query: 391 MLVHP--ADQIVSQLGQDDCLGL 411
L+ P D IV+ D +GL
Sbjct: 154 ALLGPQRVDAIVNAFSTDPLVGL 176
>gi|116071634|ref|ZP_01468902.1| hypothetical protein BL107_05779 [Synechococcus sp. BL107]
gi|116065257|gb|EAU71015.1| hypothetical protein BL107_05779 [Synechococcus sp. BL107]
Length = 934
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 19/235 (8%)
Query: 284 KIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILE-----GKQAKAE 338
++A++LH++Y + L EFL L ITT + +KK I+ ILE +
Sbjct: 45 QVAIYLHIYYPESLHEFLEYLTVLPSQIRLVITTTTSEKKELIIEILERALLINRLDLCH 104
Query: 339 VFVTGNVGRDVLPMLKLKRHLSQYDYIGHFHTKKSKEADYWAGESWRKELINMLV---HP 395
V+ N GRD+ + + L +YD + H KKS + G+SW + LI +
Sbjct: 105 VY-HENKGRDIGAFINIYDELIKYDVVCKLHAKKSPHLGEF-GKSWFRYLIRSTIGNQSA 162
Query: 396 ADQIVSQLGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQ 455
+ IV+ L +G++ SF N A N + + ++ N + +++ ++
Sbjct: 163 IENIVNILYHSKDIGILAPT--SFQGTNNHDWASNFDISQSISDHIF---NSELDINKEK 217
Query: 456 MNTFVMSYGTFVWFKYDALSPLFDLNMTEEDVPSEPLP-QNSILHAIERLLVYIA 509
+ T WFK +AL+ ++ + P EP+P + H++ERL+ YI+
Sbjct: 218 LR---YPSATVFWFKPEALNQQQFRSIQPDFFPEEPIPIDGTTAHSLERLIPYIS 269
>gi|134297301|ref|YP_001121036.1| Lipopolysaccharide biosynthesis protein-like protein [Burkholderia
vietnamiensis G4]
gi|134140458|gb|ABO56201.1| Lipopolysaccharide biosynthesis protein-like protein [Burkholderia
vietnamiensis G4]
Length = 1231
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 73/251 (29%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 286 AVHLHVFYVDLLAEFLHAFESFHFSYDLFITTD---SEKKKNEILGILEGKQAKAEVFVT 342
A+ H++Y DLL E L E + + D FIT S ++ EIL L+ V
Sbjct: 998 ALVAHLYYFDLLPELLSLIER-NVNLDAFITIPVHFSREQVGEILASLD----NVYVLRV 1052
Query: 343 GNVGRDVLPMLKLKRHLSQYDY--IGHFHTKKS-KEADYWAGESWRKELINMLVHPA--D 397
N GRD+LP L + + Y Y + H+KKS + AD G RK + L+ P+
Sbjct: 1053 QNRGRDILPFLNIYPIIKSYSYANLVKVHSKKSPQRAD---GALLRKRALLELLDPSIVP 1109
Query: 398 QIVSQLGQDDCLGLVIADIPSFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMN 457
++ L D +GL+ N + N ++N R+ VD
Sbjct: 1110 GVLRALNTDPKIGLIAPSNSLCSLSNSDYLINNRK----QLNYCLSRLGL---VDSSLNF 1162
Query: 458 TFVMSYGTFVWFKYDALSPLFDLNMTEEDVPSEPLPQ--NSILHAIERLLVYIAWDKQYD 515
F+ G+ W + DAL L DL++ EED E L Q ++ HAIERL ++ Y
Sbjct: 1163 EFIA--GSMFWARVDALRMLSDLSLREEDF-EEELGQLDGTLAHAIERLFCFLGKHVGYR 1219
Query: 516 FKISYNQLGLT 526
+ +Q+G++
Sbjct: 1220 -TLPVDQIGIS 1229
>gi|78213552|ref|YP_382331.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
CC9605]
gi|78198011|gb|ABB35776.1| Lipopolysaccharide biosynthesis protein-like [Synechococcus sp.
CC9605]
Length = 1162
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 81/329 (24%), Positives = 133/329 (40%), Gaps = 74/329 (22%)
Query: 225 TIAANEGLTPYILNDIEN-TTDYP------VDLIVKHMSRIDLPDYPYLLG-----RKIL 272
T + +G+ P IL D +N + YP ++ +V H + + ++ Y + RK+
Sbjct: 125 TSGSKKGIDPSILFDTDNYLSKYPDVRESGLNPMV-HCFKFGMNEHRYSMDNIHFMRKMA 183
Query: 273 DLSLPIS---------LPDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITT--DSEK 321
D+ ++ L +KK+ + LH+FY +L ++ S D+FI+T DS
Sbjct: 184 DIKKTVTDDFNAIKEGLINKKVGIFLHIFYPELGETIAAYLKNIPCSIDVFISTREDSVA 243
Query: 322 KKNEILGILEGKQAKAEVFVTGNVGRDVLP-MLKLKRHLSQYDYIGHFHTKKSKEADYWA 380
+I +E Q K EV N+GRDV P ++ + + YDYI H+KKS ++ +
Sbjct: 244 ALEKIFARVENTQ-KIEVRHFSNIGRDVAPFIVGFRDQILNYDYILKLHSKKSPHSNALS 302
Query: 381 GESWRKELINML---------------------VHPADQIVSQLG--QDDCLGLVIADIP 417
G W ++ L V+P + LG D C G
Sbjct: 303 G--WFLHCLDNLIGSEAITATNLKALQSPEVGIVYPIENYALSLGIQHDSCWGHEDG--- 357
Query: 418 SFFRFNRIVVAWNEALISPEMNKLWERMNCQKEVDFKQMNTFVMSYGTFVWFKYDALSPL 477
N A P +N R N ++ K+ + F GT W K L +
Sbjct: 358 ------------NYAKARPFLN----RYNLRQ---IKRESQFQFPTGTMFWCKPAVLQSI 398
Query: 478 FDLNMTEEDVPSE-PLPQNSILHAIERLL 505
D + + E +I H+IERL+
Sbjct: 399 LDWGLNWNNFDEEGGQIDGTIAHSIERLI 427
>gi|23009067|ref|ZP_00050256.1| COG3754: Lipopolysaccharide biosynthesis protein [Magnetospirillum
magnetotacticum MS-1]
Length = 486
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 28/214 (13%)
Query: 280 LPDKKIAVHLHVFYVDLLAEFLHAFESFHFSYDLFITTDSEKKKNEILGILEGKQAKA-- 337
L + +I V H+F+ DL L + F +++TT S K + I G+ +K
Sbjct: 270 LANARIGVFAHIFHTDLCEYVLKYTNNIPFDTTVYVTTSSASKADFIRKTF-GRLSKHRY 328
Query: 338 EVFVTGNVGRDVLPMLKLKRHLSQY-DYIGHFHTKKSKEADYWAG-ESWRKELINMLVHP 395
E+ + N GRD+ PML R+ Q DY H HTKKS Y +G ++WR L M +
Sbjct: 329 EIVIAPNRGRDIAPMLVGYRNAFQNCDYAVHVHTKKSLH--YSSGFDAWRDYLFEMNLGS 386
Query: 396 AD---QIVSQLGQDDCLGLVIAD----IPSFFRFNRIVVAWNEALISPEMNKLWERMNCQ 448
A+ IV+ L + + +G V D I ++ + A N L ++ E +
Sbjct: 387 AELITGIVNVLSRSN-IGAVAPDHYAPIAKLIQWGGNIDAINGLLSFTGLSVASENV--- 442
Query: 449 KEVDFKQMNTFVMSYGTFVWFKYDALSPLFDLNM 482
+DF G+ WFK DALS L ++++
Sbjct: 443 --LDFPS--------GSMFWFKPDALSKLMEIHL 466
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.323 0.139 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,233,004,903
Number of Sequences: 5470121
Number of extensions: 97427718
Number of successful extensions: 213946
Number of sequences better than 1.0e-05: 93
Number of HSP's better than 0.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 213693
Number of HSP's gapped (non-prelim): 109
length of query: 582
length of database: 1,894,087,724
effective HSP length: 138
effective length of query: 444
effective length of database: 1,139,211,026
effective search space: 505809695544
effective search space used: 505809695544
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 133 (55.8 bits)