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Finding cDNAs
UGID:294298     UniGene Mm.155687     Mus musculus (mouse)   Spty2d1 Order cDNA clone, Links
SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) (Spty2d1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_780527.2 SPT2, Suppressor of Ty, domain containing 1 M. musculus 100.0 681
NP_919261.2 SPT2, Suppressor of Ty, domain containing 1 H. sapiens 86.4 684
XP_001923121.1 PREDICTED: hypothetical protein LOC337191 isoform 1 D. rerio 51.9 630
NP_001131040.1 SPT2 domain-containing protein 1 X. laevis 51.0 792

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; mammary gland; mixed; bone marrow; brain; kidney; lymph node; thymus; skin; uncharacterized tissue; pancreas; fertilized ovum; lung; ovary; salivary gland; eye; extraembryonic tissue; testis; thyroid; muscle; other; uterus; bladder; pituitary gland; connective tissue; nasopharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7 B4
UniSTS entry: Chr 7 RH136438
UniSTS entry: Chr 7 AI852426
UniSTS entry: Chr 7 RH127203
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AK077312.1 Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330408E05 product:Similar to P16H6, full insert sequence
AK030869.1 Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830435K17 product:similar to P16H6 (FRAGMENT) [Xenopus laevis], full insert sequence P
NM_175318.4 Mus musculus SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) (Spty2d1), mRNA PA
BC079859.1 Mus musculus SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae), mRNA (cDNA clone MGC:100236 IMAGE:6834544), complete cds PA
AK194356.1 Mus musculus cDNA, clone:Y1G0115B12, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000061639, based on BLAT search
AK192731.1 Mus musculus cDNA, clone:Y1G0109M10, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000061639, based on BLAT search P
AK185791.1 Mus musculus cDNA, clone:Y0G0135E02, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000061639, based on BLAT search
AK162467.1 Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430073J23 product:Similar to P16H6 homolog [Mus musculus], full insert sequence P
AK147856.1 Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270069L08 product:Similar to P16H6, full insert sequence P
AK134146.1 Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830452L05 product:unclassifiable, full insert sequence

EST sequences (10 of 219) [Show all sequences]

CA568184.1 Clone NIA:K0424F11_IMAGE:30061414 bone marrow 5' read PM
CA575651.1 Clone NIA:K0633H02_IMAGE:30071989 bone marrow 5' read
BY006831.1 Clone G430002K23 mixed 5' read
BY013386.1 Clone G730038D06 lung 5' read
BY013542.1 Clone G730040A21 lung 5' read P
BY014774.1 Clone G730047O16 lung 5' read P
BY020052.1 Clone G830038I11 mammary gland 5' read
BY024320.1 Clone G930022H23 mammary gland 5' read P
BY024562.1 Clone G930023K20 mammary gland 5' read P
BY027882.1 Clone G930046C10 mammary gland 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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