R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 16 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|585973|sp|P37829|SCRK_SOLTU FRUCTOKINASE >gi|626018|pir||S39997
fructokinase (EC 2.7.1.4) - potato >gi|297015|emb|CAA78283.1|
(Z12823) fructokinase [Solanum tuberosum] >gi|1095321|prf||2108342A
fructokinase [Solanum tuberosum]
Length = 319
Frame 3 hits (HSPs): _____________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | | 319
0 50 100 150 200 250 300
__________________
Annotated Domains:
BLOCKS BL00583A: pfkB family of carbohydrate ki 42..57
BLOCKS BL00583B: pfkB family of carbohydrate ki 219..231
BLOCKS BL00583C: pfkB family of carbohydrate ki 251..264
DOMO DM00703: PFKBFAMILYOFCARBOHYDRATEKINASES 9..308
PFAM pfkB: pfkB family carbohydrate kinase 43..263
PRODOM PD203653: SCRK_SOLTU 1..26
PRODOM PD001280: SCRK(6) RBSK(5) RFAE(3) 28..99
PRODOM PD186175: SCRK(5) KDGK(4) 101..186
PRODOM PD002360: SCRK(3) 191..265
PRODOM PD188139: O82616(1) Q42896(1) SCRK(1) 271..315
PROSITE PFKB_KINASES_1: pfkB family of carbohydr 43..67
PROSITE PFKB_KINASES_2: pfkB family of carbohydr 252..265
__________________
Plus Strand HSPs:
Score = 317 (111.6 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 63/81 (77%), Positives = 70/81 (86%), Frame = +3
Query: 21 FKGSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQ 200
F GSV FHV TVDTTGAGDSFVGALL KIVDDQ+ILEDE RL+EVL+F+ ACGAITTT+
Sbjct: 239 FHGSVGGFHVKTVDTTGAGDSFVGALLTKIVDDQAILEDEARLKEVLRFSCACGAITTTK 298
Query: 201 KGAIPALPKEEAALKLIKGGS 263
KGAIPALP E AL L+KGG+
Sbjct: 299 KGAIPALPTESEALTLLKGGA 319
>gi|11259268|pir||T49289 fructokinase-like protein - Arabidopsis thaliana
>gi|6996284|emb|CAB75445.1| (AL138659) fructokinase-like protein
[Arabidopsis thaliana]
Length = 326
Frame 3 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | 326
0 150 300
Plus Strand HSPs:
Score = 314 (110.5 bits), Expect = 4.0e-27, P = 4.0e-27
Identities = 61/80 (76%), Positives = 69/80 (86%), Frame = +3
Query: 18 SFKGSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTT 197
SF+GSVD FHV+ VDTTGAGDSFVGALL KIVDD+++LEDE RLREVL+ ANACGAITTT
Sbjct: 246 SFRGSVDPFHVDAVDTTGAGDSFVGALLCKIVDDRAVLEDEARLREVLRLANACGAITTT 305
Query: 198 QKGAIPALPKEEAALKLIKG 257
+KGAIPALP E L+KG
Sbjct: 306 KKGAIPALPTESEVQSLLKG 325
>gi|7434223|pir||T14544 fructokinase (EC 2.7.1.4) - beet
>gi|1052973|gb|AAA80675.1| (U37838) fructokinase [Beta vulgaris]
Length = 331
Frame 3 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | 331
0 150 300
Plus Strand HSPs:
Score = 311 (109.5 bits), Expect = 8.3e-27, P = 8.3e-27
Identities = 63/79 (79%), Positives = 69/79 (87%), Frame = +3
Query: 18 SFKGSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTT 197
+FKGS+D F VN VDTTGAGDSFVGALL KIVDD SI+EDE RL+EVLKFANACGAITTT
Sbjct: 249 NFKGSLDGFKVNAVDTTGAGDSFVGALLNKIVDDHSIIEDESRLKEVLKFANACGAITTT 308
Query: 198 QKGAIPALPKEEAALKLIK 254
+KGAIPALP AL+LIK
Sbjct: 309 KKGAIPALPTVADALELIK 327
>gi|1915974|gb|AAB51108.1| (U62329) fructokinase [Lycopersicon esculentum]
>gi|2102693|gb|AAB57734.1| (U64818) fructokinase [Lycopersicon
esculentum]
Length = 328
Frame 3 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | 328
0 150 300
Plus Strand HSPs:
Score = 308 (108.4 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 61/81 (75%), Positives = 69/81 (85%), Frame = +3
Query: 21 FKGSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQ 200
F G+V FHV TVDTTGAGDSFVGALL KIVDDQ+ILEDE RL+EVL+F+ ACGAITTT+
Sbjct: 248 FHGTVGGFHVKTVDTTGAGDSFVGALLTKIVDDQTILEDEARLKEVLRFSCACGAITTTK 307
Query: 201 KGAIPALPKEEAALKLIKGGS 263
KGAIPALP AL L+KGG+
Sbjct: 308 KGAIPALPTASEALTLLKGGA 328
>gi|8810464|gb|AAF80125.1|AC024174_7 (AC024174) Contains similarity to a
fructokinase from Lycopersicon esculentum gi|1915974 and is a
member of the pfkB carbohydrate kinase family PF|00294.
[Arabidopsis thaliana]
Length = 345
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | 345
0 150 300
Plus Strand HSPs:
Score = 302 (106.3 bits), Expect = 7.4e-26, P = 7.4e-26
Identities = 59/78 (75%), Positives = 68/78 (87%), Frame = +3
Query: 21 FKGSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQ 200
F GSV+ FHV+ VDTTGAGDSFVGALL +IVDDQS+LEDE RLR+VL+FANACGAITTT+
Sbjct: 247 FHGSVETFHVDAVDTTGAGDSFVGALLQQIVDDQSVLEDEARLRKVLRFANACGAITTTK 306
Query: 201 KGAIPALPKEEAALKLIK 254
KGAIPALP + AL +K
Sbjct: 307 KGAIPALPTDIEALSFLK 324
>gi|4589962|gb|AAD26480.1|AC007169_12 (AC007169) putative fructokinase
[Arabidopsis thaliana]
Length = 325
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | | | 325
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 299 (105.3 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 57/71 (80%), Positives = 66/71 (92%), Frame = +3
Query: 18 SFKGSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTT 197
+FKG+VD FHVN VDTTGAGDSFVGALL +IVDD+S+LEDE RLR+VL+FANACGAITTT
Sbjct: 245 TFKGAVDPFHVNAVDTTGAGDSFVGALLNQIVDDRSVLEDEERLRKVLRFANACGAITTT 304
Query: 198 QKGAIPALPKE 230
+KGAIPALP +
Sbjct: 305 KKGAIPALPSD 315
>gi|8810465|gb|AAF80126.1|AC024174_8 (AC024174) Contains similarity to a
fructokinase from Solanum tuberosum gi|585973 and is a member of
the pfkB carbohydrate kinase family PF|00294. [Arabidopsis
thaliana]
Length = 329
Frame 3 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | 329
0 150 300
Plus Strand HSPs:
Score = 296 (104.2 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 58/78 (74%), Positives = 68/78 (87%), Frame = +3
Query: 21 FKGSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQ 200
F GSV+ FHV+ VDTTGAGDSFVGALL +IVDDQS+LE+E RLR+VL+FANACGAITTT+
Sbjct: 248 FHGSVETFHVDAVDTTGAGDSFVGALLNQIVDDQSVLEEEERLRKVLRFANACGAITTTK 307
Query: 201 KGAIPALPKEEAALKLIK 254
KGAIPALP + AL +K
Sbjct: 308 KGAIPALPTDCEALSFLK 325
>gi|5734772|gb|AAD50037.1|AC007980_2 (AC007980) 9178 [Arabidopsis thaliana]
Length = 146
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | 146
0 50 100
Plus Strand HSPs:
Score = 290 (102.1 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 57/78 (73%), Positives = 67/78 (85%), Frame = +3
Query: 21 FKGSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQ 200
F GSV+ FHV+ VDTTGAGDSFVGALL +IVDDQS+LE+E RLR+VL+ ANACGAITTT+
Sbjct: 64 FHGSVETFHVDAVDTTGAGDSFVGALLNQIVDDQSVLEEEERLRKVLRIANACGAITTTK 123
Query: 201 KGAIPALPKEEAALKLIK 254
KGAIPALP + AL +K
Sbjct: 124 KGAIPALPTDCEALSFLK 141
>gi|7434221|pir||T01971 fructokinase (EC 2.7.1.4) - Arabidopsis thaliana
>gi|3695403|gb|AAC62803.1| (AF096373) contains similarity to the
pfkB family of carbohydrate kinases (Pfam: PF00294, E=1.6e-75)
[Arabidopsis thaliana] >gi|4538955|emb|CAB39779.1| (AL049488)
fructokinase-like protein [Arabidopsis thaliana]
>gi|7267722|emb|CAB78149.1| (AL161516) fructokinase-like protein
[Arabidopsis thaliana]
Length = 324
Frame 3 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | | | 324
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 246 (86.6 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 51/81 (62%), Positives = 58/81 (71%), Frame = +3
Query: 21 FKGSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQ 200
FKG V + V VDTTGAGDSFVGA L + D SIL+DE +L+E L FANACGA+ TTQ
Sbjct: 243 FKGRVPGYAVKAVDTTGAGDSFVGAFLVSLGKDGSILDDEGKLKEALAFANACGAVCTTQ 302
Query: 201 KGAIPALPKEEAALKLIKGGS 263
KGAIPALP A KL+K S
Sbjct: 303 KGAIPALPTPADAQKLMKSKS 323
>gi|10177882|dbj|BAB11252.1| (AB010074) fructokinase 1 [Arabidopsis thaliana]
Length = 343
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | 343
0 150 300
Plus Strand HSPs:
Score = 219 (77.1 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 43/77 (55%), Positives = 54/77 (70%), Frame = +3
Query: 21 FKGSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQ 200
FKG V V VDTTGAGD+FV LL + D ++L+DE +LRE L FANACGAIT T+
Sbjct: 262 FKGRVGGVKVKPVDTTGAGDAFVSGLLNSLASDLTLLKDEKKLREALLFANACGAITVTE 321
Query: 201 KGAIPALPKEEAALKLI 251
+GAIPA+P +A L+
Sbjct: 322 RGAIPAMPSMDAVQDLL 338
>gi|12322265|gb|AAG51160.1|AC074025_10 (AC074025) fructokinase, putative
[Arabidopsis thaliana] >gi|12324405|gb|AAG52172.1|AC020665_17
(AC020665) fructokinase, putative; 80047-82040 [Arabidopsis
thaliana]
Length = 384
Frame 3 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 384
0 150 300
Plus Strand HSPs:
Score = 220 (77.4 bits), Expect = 9.3e-17, P = 9.3e-17
Identities = 42/72 (58%), Positives = 54/72 (75%), Frame = +3
Query: 21 FKGSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQ 200
F G V V+ VDTTGAGD+FV +L+++ +D S+L+DE RLRE L FANACGA+T
Sbjct: 303 FSGRVHGLKVDVVDTTGAGDAFVAGILSQLANDLSLLQDEERLREALMFANACGALTVKV 362
Query: 201 KGAIPALPKEEA 236
+GAIPALP +EA
Sbjct: 363 RGAIPALPTKEA 374
>gi|7434220|pir||T07588 fructokinase (EC 2.7.1.4) 1 - tomato
>gi|2102691|gb|AAB57733.1| (U64817) fructokinase [Lycopersicon
esculentum]
Length = 347
Frame 3 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 347
0 150 300
Plus Strand HSPs:
Score = 200 (70.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 37/72 (51%), Positives = 50/72 (69%), Frame = +3
Query: 21 FKGSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQ 200
FKG V++ V VDTTGAGD+F G +L + D S+ +DE RLRE + FAN C A+T T
Sbjct: 266 FKGRVNSIKVKAVDTTGAGDAFTGGVLKCLASDASLYQDEKRLREAIFFANVCAALTVTG 325
Query: 201 KGAIPALPKEEA 236
+G IP+LP ++A
Sbjct: 326 RGGIPSLPTQDA 337
>gi|134328|sp|P22824|SCRK_VIBAL FRUCTOKINASE >gi|97047|pir||JQ0782 fructokinase
(EC 2.7.1.4) - Vibrio alginolyticus >gi|155263|gb|AAA27556.1|
(M76768) fructokinase [Vibrio alginolyticus]
Length = 307
Frame 3 hits (HSPs): ____________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | | 307
0 50 100 150 200 250 300
__________________
Annotated Domains:
BLOCKS BL00583A: pfkB family of carbohydrate ki 26..41
BLOCKS BL00583B: pfkB family of carbohydrate ki 210..222
BLOCKS BL00583C: pfkB family of carbohydrate ki 242..255
DOMO DM00703: PFKBFAMILYOFCARBOHYDRATEKINASES 1..298
PFAM pfkB: pfkB family carbohydrate kinase 27..254
PRODOM PD001280: SCRK(6) RBSK(5) RFAE(3) 1..82
PRODOM PD186175: SCRK(5) KDGK(4) 86..167
PRODOM PD000850: RBSK(5) ADK(4) KDGK(4) 175..281
PRODOM PD167085: SCRK_VIBAL 283..306
PROSITE PFKB_KINASES_1: pfkB family of carbohydr 27..51
PROSITE PFKB_KINASES_2: pfkB family of carbohydr 243..256
__________________
Plus Strand HSPs:
Score = 153 (53.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 31/68 (45%), Positives = 46/68 (67%), Frame = +3
Query: 48 VNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAIPALPK 227
V+ +DTTGAGD+FVG LLA + + ++ P + +++AN CGA+ TTQKGA+ ALP
Sbjct: 239 VSPIDTTGAGDAFVGGLLA-CLSRHADWKNHPVVSSAIQWANGCGALATTQKGAMTALPT 297
Query: 228 EEAALKLI 251
+ L+ I
Sbjct: 298 QTELLRFI 305
>gi|11259286|pir||A82433 fructokinase VCA0656 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9658072|gb|AAF96557.1| (AE004395)
fructokinase [Vibrio cholerae]
Length = 323
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | | | 323
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 152 (53.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 34/76 (44%), Positives = 48/76 (63%), Frame = +3
Query: 9 TPXSFKGSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAI 188
TP S + V V +DTTGAGD+FVG LL ++ Q ++ + + +K+AN CGA+
Sbjct: 244 TPNS-RQIVSGKAVKPIDTTGAGDAFVGGLLYRLSVAQD-WHNQATILDAVKWANGCGAL 301
Query: 189 TTTQKGAIPALPKEEA 236
TTQKGA+ ALP + A
Sbjct: 302 ATTQKGAMTALPNQAA 317
>gi|7025342|gb|AAF35840.1|AF205034_3 (AF205034) ScrK [Clostridium
acetobutylicum]
Length = 316
Frame 3 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | | | 316
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 141 (49.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 28/67 (41%), Positives = 47/67 (70%), Frame = +3
Query: 33 VDAFHVNTVDTTGAGDSFVGALLAKI---VDDQSILEDEPRLREVLKFANACGAITTTQK 203
+++ + ++D+TGAGD+FVGA L K+ ++ + IL D +++E ++FAN GAI T+
Sbjct: 242 IESIKIKSIDSTGAGDAFVGAFLYKLSEALEARDILSDFNKIKENVRFANKVGAIVCTKL 301
Query: 204 GAIPALP 224
GAI +LP
Sbjct: 302 GAISSLP 308
>gi|3915420|sp|O34768|YDJE_BACSU HYPOTHETICAL SUGAR KINASE IN GUTA-COTA
INTERGENIC REGION >gi|7434222|pir||A69789 fructokinase homolog ydjE
- Bacillus subtilis >gi|2522009|dbj|BAA22760.1| (AB007638) sugar
transport protein [Bacillus subtilis] >gi|2632930|emb|CAB12436.1|
(Z99107) similar to fructokinase [Bacillus subtilis]
Length = 320
Frame 3 hits (HSPs): ____________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | | | 320
0 50 100 150 200 250 300
__________________
Annotated Domains:
PFAM pfkB: pfkB family carbohydrate kinase 36..265
PRODOM PD001280: SCRK(6) RBSK(5) RFAE(3) 20..91
PRODOM PD186175: SCRK(5) KDGK(4) 94..174
PRODOM PD000850: RBSK(5) ADK(4) KDGK(4) 185..271
PRODOM PD167562: YDJE_BACSU 273..319
PROSITE PFKB_KINASES_1: pfkB family of carbohydr 36..60
__________________
Plus Strand HSPs:
Score = 140 (49.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 32/76 (42%), Positives = 49/76 (64%), Frame = +3
Query: 33 VDAFHVNTVDTTGAGDSFVGALLAKIVDD---QSILEDEPRLREVLKFANACGAITTTQK 203
+ + V ++D+TGAGD+FVGA L ++ + QS+ D +LRE++ FAN GA+ T+
Sbjct: 245 IPSIPVTSIDSTGAGDAFVGAALYQLANTDQIQSVDADFVKLREIVAFANKVGALVCTKI 304
Query: 204 GAIPALPK-EEAALKL 248
GAI ALP +E + L
Sbjct: 305 GAIDALPSLDEIGVSL 320
>gi|4091873|gb|AAC99323.1| (AF059741) fructokinase [Clostridium beijerinckii]
Length = 312
Frame 3 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | | | 312
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 139 (48.9 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 28/65 (43%), Positives = 45/65 (69%), Frame = +3
Query: 33 VDAFHVNTVDTTGAGDSFVGALLAKI--VDDQSILEDEPRLREVLKFANACGAITTTQKG 206
+ + + VD+TGAGD+FVGA+L ++ +DD+ + + R +E++ FAN GAIT T G
Sbjct: 242 IPSIEIKQVDSTGAGDAFVGAVLRQVSDIDDKESISFD-RWKEIVSFANKVGAITCTNYG 300
Query: 207 AIPALP 224
AI ++P
Sbjct: 301 AIASMP 306
>gi|12722275|gb|AAK03933.1| (AE006222) unknown [Pasteurella multocida]
Length = 308
Frame 3 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | | | 308
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 137 (48.2 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 30/59 (50%), Positives = 41/59 (69%), Frame = +3
Query: 57 VDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAIPALPKEE 233
VDTTGAGD+FV LL I ++ ++ L E++K ANACGA+ TT KGA+ ALP ++
Sbjct: 243 VDTTGAGDAFVSGLLFGISQVKN-WQNPTALVEIIKQANACGALATTAKGAMSALPNKQ 300
>gi|134326|sp|P24261|SCRK_SALTH FRUCTOKINASE >gi|79035|pir||A41655 fructokinase
(EC 2.7.1.4) - Salmonella thompson plasmid Sac (fragment)
>gi|154361|gb|AAA27217.1| (M63038) putative [Salmonella thompson]
Length = 221
Frame 3 hits (HSPs): ______________
Annotated Domains: _______________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
__________________
Annotated Domains:
PFAM pfkB: pfkB family carbohydrate kinase 1..170
PROSITE PFKB_KINASES_2: pfkB family of carbohydr 159..172
__________________
Plus Strand HSPs:
Score = 129 (45.4 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 29/59 (49%), Positives = 36/59 (61%), Frame = +3
Query: 48 VNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAIPALP 224
V +VDTTGAGD+FV LLA + + + D L L A CGA+ TT KGA+ ALP
Sbjct: 155 VASVDTTGAGDAFVAGLLASLAAN-GMPTDMTALEPTLTLAQTCGALATTAKGAMTALP 212
>gi|12516729|gb|AAG57487.1|AE005467_6 (AE005467) D-fructokinase [Escherichia
coli O157:H7]
Length = 305
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | || 305
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 132 (46.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 29/70 (41%), Positives = 41/70 (58%), Frame = +3
Query: 21 FKGSVDAF---HVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAIT 191
++G V F V+ VD+TGAGD+FV LL + + DE +R ++ A CGA+
Sbjct: 230 YRGQVHHFAGMSVDCVDSTGAGDAFVAGLLTGL-SSTGLSTDEREMRRIIDLAQRCGALA 288
Query: 192 TTQKGAIPALP 224
T KGA+ ALP
Sbjct: 289 VTAKGAMTALP 299
>gi|12720370|gb|AAK02236.1| (AE006050) RbsK [Pasteurella multocida]
Length = 306
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | | | 306
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 29/74 (39%), Positives = 46/74 (62%), Frame = +3
Query: 33 VDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAI 212
V F V+ DTT AGD+F GAL+ ++LED+P L + ++FA+A AI+ T+ GA
Sbjct: 238 VAGFRVDAKDTTAAGDTFNGALMT------ALLEDKP-LADAIRFAHAAAAISVTRAGAQ 290
Query: 213 PALPKEEAALKLIK 254
P++P + L ++
Sbjct: 291 PSIPTRQETLNFLQ 304
>gi|134327|sp|P26984|SCRK_SALTY FRUCTOKINASE >gi|96750|pir||S18524 fructokinase
(EC 2.7.1.4) - Salmonella typhimurium plasmid pUR400
>gi|47928|emb|CAA43323.1| (X61005) fructokinase [Salmonella
typhimurium]
Length = 307
Frame 3 hits (HSPs): __________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | | 307
0 50 100 150 200 250 300
__________________
Annotated Domains:
BLOCKS BL00583A: pfkB family of carbohydrate ki 27..42
BLOCKS BL00583B: pfkB family of carbohydrate ki 212..224
BLOCKS BL00583C: pfkB family of carbohydrate ki 244..257
DOMO DM00703: PFKBFAMILYOFCARBOHYDRATEKINASES 1..300
PFAM pfkB: pfkB family carbohydrate kinase 28..256
PRODOM PD001280: SCRK(6) RBSK(5) RFAE(3) 1..83
PRODOM PD186175: SCRK(5) KDGK(4) 87..166
PRODOM PD002360: SCRK(3) 169..262
PRODOM PD154048: SCRK(2) 265..304
PROSITE PFKB_KINASES_1: pfkB family of carbohydr 28..52
PROSITE PFKB_KINASES_2: pfkB family of carbohydr 245..258
__________________
Plus Strand HSPs:
Score = 129 (45.4 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 29/59 (49%), Positives = 36/59 (61%), Frame = +3
Query: 48 VNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAIPALP 224
V +VDTTGAGD+FV LLA + + + D L L A CGA+ TT KGA+ ALP
Sbjct: 241 VASVDTTGAGDAFVAGLLASLAAN-GMPTDMTALEPTLTLAQTCGALATTAKGAMTALP 298
>gi|12018042|gb|AAG45371.1|AF307052_3 (AF307052) sugar kinase [Pyrococcus
furiosus] >gi|12018059|gb|AAG45387.1|AF307053_2 (AF307053) sugar
kinase [Thermococcus litoralis]
Length = 312
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | | | 312
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 129 (45.4 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 33/73 (45%), Positives = 47/73 (64%), Frame = +3
Query: 33 VDAFHVNTVDTTGAGDSFVGALLAKI--VDDQSILE-DEPRLREVLKFANACGAITTTQK 203
V +F V VDTTGAGD+F+ ALLA + + ILE + L+E+ FAN A++TT++
Sbjct: 232 VPSFKVEPVDTTGAGDAFMAALLASLFYMGKLDILEFSKEELKELGSFANLVAALSTTKR 291
Query: 204 GAIPALPKEEAALK 245
GA ++P E LK
Sbjct: 292 GAW-SVPSLEEVLK 304
>gi|7434224|pir||G75112 fructokinase (EC 2.7.1.4) PAB0482 - Pyrococcus abyssi
(strain Orsay) >gi|5458127|emb|CAB49616.1| (AJ248285) FRUCTOKINASE
(EC 2.7.1.4) [Pyrococcus abyssi]
Length = 305
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | || 305
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 128 (45.1 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 31/71 (43%), Positives = 44/71 (61%), Frame = +3
Query: 33 VDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAI 212
V + VN VDTTGAGD+F ALL I+ + I + L ++ KFAN A++T ++GA
Sbjct: 228 VPGYKVNPVDTTGAGDAFTAALLVGIMKVREITNEN--LEKIGKFANLVAALSTLKRGAW 285
Query: 213 PALPKEEAALK 245
++PK E LK
Sbjct: 286 -SVPKVEELLK 295
>gi|132127|sp|P05054|RBSK_ECOLI RIBOKINASE >gi|66667|pir||KIECRB ribokinase (EC
2.7.1.15) [validated] - Escherichia coli >gi|5822394|pdb|1RK2|B
Chain B, E. Coli Ribokinase Complexed With Ribose And Adp, Solved
In Space Group P212121 >gi|2981974|pdb|1RKD| E. Coli Ribokinase
Complexed With Ribose And Adp >gi|5822395|pdb|1RK2|C Chain C, E.
Coli Ribokinase Complexed With Ribose And Adp, Solved In Space
Group P212121 >gi|5822393|pdb|1RK2|A Chain A, E. Coli Ribokinase
Complexed With Ribose And Adp, Solved In Space Group P212121
>gi|5822396|pdb|1RK2|D Chain D, E. Coli Ribokinase Complexed With
Ribose And Adp, Solved In Space Group P212121
>gi|6137732|pdb|1RKA|A Chain A, The Apo Form Of E. Coli Ribokinase
>gi|6137733|pdb|1RKS|A Chain A, E. Coli Ribokinase In Complex With
D-Ribose >gi|147516|gb|AAA51476.1| (M13169) ribokinase [Escherichia
coli] >gi|290602|gb|AAA62105.1| (L10328) ribokinase [Escherichia
coli] >gi|1790193|gb|AAC76775.1| (AE000452) ribokinase [Escherichia
coli K12] >gi|12518615|gb|AAG58955.1|AE005607_1 (AE005607)
ribokinase [Escherichia coli O157:H7]
Length = 309
Frame 3 hits (HSPs): ___________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | | 309
0 50 100 150 200 250 300
__________________
Annotated Domains:
BLOCKS BL00583A: pfkB family of carbohydrate ki 40..55
BLOCKS BL00583B: pfkB family of carbohydrate ki 216..228
BLOCKS BL00583C: pfkB family of carbohydrate ki 248..261
DOMO DM00703: PFKBFAMILYOFCARBOHYDRATEKINASES 3..298
PFAM pfkB: pfkB family carbohydrate kinase 41..260
PRINTS RIBOKINASE1: Ribokinase motif I - 1 9..30
PRINTS RIBOKINASE2: Ribokinase motif II - 1 36..55
PRINTS RIBOKINASE3: Ribokinase motif III - 1 108..121
PRINTS RIBOKINASE4: Ribokinase motif IV - 1 176..191
PRINTS RIBOKINASE5: Ribokinase motif V - 1 220..231
PRODOM PD001280: SCRK(6) RBSK(5) RFAE(3) 8..102
PRODOM PD100552: RBSK(4) 105..170
PRODOM PD000850: RBSK(5) ADK(4) KDGK(4) 175..272
PRODOM PD100485: RBSK_ECOLI 286..308
PROSITE PFKB_KINASES_1: pfkB family of carbohydr 41..65
PROSITE PFKB_KINASES_2: pfkB family of carbohydr 249..262
__________________
Plus Strand HSPs:
Score = 128 (45.1 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 31/67 (46%), Positives = 44/67 (65%), Frame = +3
Query: 33 VDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAI 212
V F V VDT AGD+F GAL+ ++LE++P L E ++FA+A AI T+KGA
Sbjct: 240 VPGFRVQAVDTIAAGDTFNGALIT------ALLEEKP-LPEAIRFAHAAAAIAVTRKGAQ 292
Query: 213 PALP-KEE 233
P++P +EE
Sbjct: 293 PSVPWREE 300
>gi|7434230|pir||S77227 fructokinase (EC 2.7.1.4) - Synechocystis sp. (strain
PCC 6803) >gi|1652641|dbj|BAA17561.1| (D90907) fructokinase
[Synechocystis sp.]
Length = 307
Frame 3 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | | | 307
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 127 (44.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/63 (47%), Positives = 38/63 (60%), Frame = +3
Query: 27 GSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLR-EVLKFANACGAITTTQK 203
G V AF VN DTTGAGDSFV LA+ + L +P L + + +A+A GA+TT
Sbjct: 243 GEVPAFKVNVRDTTGAGDSFVAGFLAQALTHGENLFIDPHLSCQAVTYASAIGALTTLHP 302
Query: 204 GAI 212
GAI
Sbjct: 303 GAI 305
>gi|11259288|pir||B82660 fructokinase XF1610 [imported] - Xylella fastidiosa
(strain 9a5c) >gi|9106659|gb|AAF84419.1|AE003988_6 (AE003988)
fructokinase [Xylella fastidiosa]
Length = 338
Frame 3 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | 338
0 150 300
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 32/84 (38%), Positives = 46/84 (54%), Frame = +3
Query: 24 KGSVDAFHVNTVDTTGAGDSFVGALL---AKIVDDQSILED---EPR-LREVLKFANACG 182
+G V F V D+ AGD+FVG +L A+ DD + L D +P + +L+FA A G
Sbjct: 252 RGQVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPESIASMLRFAAAVG 311
Query: 183 AITTTQKGAIPALPKEEAALKLIK 254
A+ T+ GA A+P L LI+
Sbjct: 312 ALAVTRHGAFTAMPMLSEVLSLIQ 335
>gi|134325|sp|P26420|SCRK_KLEPN FRUCTOKINASE >gi|96582|pir||S18523 fructokinase
(EC 2.7.1.4) - Klebsiella pneumoniae >gi|43930|emb|CAA43322.1|
(X61004) fructokinase [Klebsiella pneumoniae]
>gi|248849|gb|AAA08603.1| ScrK=fructokinase [Klebsiella pneumoniae,
Peptide, 307 aa]
Length = 307
Frame 3 hits (HSPs): _____________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | | 307
0 50 100 150 200 250 300
__________________
Annotated Domains:
BLOCKS BL00583A: pfkB family of carbohydrate ki 27..42
BLOCKS BL00583B: pfkB family of carbohydrate ki 212..224
BLOCKS BL00583C: pfkB family of carbohydrate ki 244..257
DOMO DM00703: PFKBFAMILYOFCARBOHYDRATEKINASES 1..300
PFAM pfkB: pfkB family carbohydrate kinase 28..256
PRODOM PD001280: SCRK(6) RBSK(5) RFAE(3) 1..83
PRODOM PD186175: SCRK(5) KDGK(4) 87..168
PRODOM PD000850: RBSK(5) ADK(4) KDGK(4) 175..263
PRODOM PD154048: SCRK(2) 265..304
PROSITE PFKB_KINASES_1: pfkB family of carbohydr 28..52
PROSITE PFKB_KINASES_2: pfkB family of carbohydr 245..258
__________________
Plus Strand HSPs:
Score = 123 (43.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 32/74 (43%), Positives = 42/74 (56%), Frame = +3
Query: 18 SFKGSVDAFH---VNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAI 188
+ +G V F V VDTTGAGD+FV LLA + I ++ L L A CGA+
Sbjct: 228 ALRGQVSHFPARPVVAVDTTGAGDAFVAGLLAGLAA-HGIPDNLAALAPDLALAQTCGAL 286
Query: 189 TTTQKGAIPALPKEE 233
TT KGA+ ALP ++
Sbjct: 287 ATTAKGAMTALPYKD 301
>gi|97826|pir||S20799 hypothetical protein 7 - Staphylococcus aureus
>gi|46512|emb|CAA36785.1| (X52543) hypothetical protein
[Staphylococcus aureus]
Length = 319
Frame 3 hits (HSPs): _____________
Annotated Domains: ____ ___
__________________________________________________
Database sequence: | | | | | | | | 319
0 50 100 150 200 250 300
__________________
Annotated Domains:
PROSITE PFKB_KINASES_1: pfkB family of carbohydr 34..58
PROSITE PFKB_KINASES_2: pfkB family of carbohydr 253..266
__________________
Plus Strand HSPs:
Score = 123 (43.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 30/74 (40%), Positives = 47/74 (63%), Frame = +3
Query: 24 KGSVDAFH----VNTVDTTGAGDSFVGALLAKIV--DDQSILE-DEPRLREVLKFANACG 182
K ++ +H V VDTTGAGD+F+GA++++I+ D ++ + E E+L F+N
Sbjct: 237 KNGINHYHSGYKVKPVDTTGAGDAFIGAVISRILATDVLNLTQLFENEGEEILAFSNRVA 296
Query: 183 AITTTQKGAIPALP 224
AI TT+ GAI +LP
Sbjct: 297 AIVTTKYGAINSLP 310
>gi|10174475|dbj|BAB05576.1| (AP001513) fructokinase [Bacillus halodurans]
Length = 319
Frame 3 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | | | 319
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 123 (43.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 29/76 (38%), Positives = 46/76 (60%), Frame = +3
Query: 33 VDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREV---LKFANACGAITTTQK 203
+ A V TVDTTGAGD+FV A+L K+ +++ + E ++EV +FA+ G + K
Sbjct: 239 IPAMAVQTVDTTGAGDAFVSAILFKLQEERKQVA-ELSIKEVEQMARFASVSGGLAAATK 297
Query: 204 GAIPALPKEEAALKLIK 254
GA+ ALP E +++
Sbjct: 298 GAMTALPTLEKVNDILR 314
>gi|4959404|gb|AAD34338.1|AF115391_7 (AF115391) ribokinase RbsK [Lactobacillus
sakei]
Length = 302
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | || 302
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 121 (42.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 31/75 (41%), Positives = 42/75 (56%), Frame = +3
Query: 9 TPXSFKGSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAI 188
TP + G V AF VN VDTT AGD+F+GAL K+ D S +E + +AN +I
Sbjct: 231 TPTA-TGFVPAFKVNAVDTTAAGDTFIGALSTKLELDYSNIE------AAMTYANKASSI 283
Query: 189 TTTQKGAIPALPKEE 233
KGA ++P E+
Sbjct: 284 AVQTKGAQNSIPYEK 298
>gi|11071660|emb|CAC14598.1| (AJ250722) fructokinase [Erwinia amylovora]
Length = 308
Frame 3 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | | | 308
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 119 (41.9 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 28/59 (47%), Positives = 37/59 (62%), Frame = +3
Query: 48 VNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAIPALP 224
V DTTGAGD+FV LLA +V + + L+ + RL ++ A GA TT KGA+ ALP
Sbjct: 241 VEVTDTTGAGDAFVAGLLAALVQETNPLQPQ-RLDFAVQQAQHSGAAATTAKGAMTALP 298
>gi|7434228|pir||H72394 fructokinase - Thermotoga maritima (strain MSB8)
>gi|4980795|gb|AAD35384.1|AE001711_7 (AE001711) fructokinase
[Thermotoga maritima]
Length = 315
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | | | 315
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 116 (40.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 30/69 (43%), Positives = 40/69 (57%), Frame = +3
Query: 21 FKGS---VDAFHVNTVDTTGAGDSFVGALLAKIVDDQ-SILEDEPRLREVLKFANACGAI 188
FKG V +F V VD TG GDSF A++ K ++ +ED E+ KFANA AI
Sbjct: 233 FKGEKRMVPSFKVKPVDATGCGDSFTAAVIHKYLEKTPETIEDAV---EIGKFANAVAAI 289
Query: 189 TTTQKGAIPALP 224
T+ G + A+P
Sbjct: 290 VITRVGGVDAMP 301
>gi|3914593|sp|O60116|RBSK_SCHPO PUTATIVE RIBOKINASE >gi|7493292|pir||T39594
ribokinase - fission yeast (Schizosaccharomyces pombe)
>gi|3133096|emb|CAA19022.1| (AL023554) ribokinase; pfkB family
carbohydrate kinase [Schizosaccharomyces pombe]
Length = 318
Frame 3 hits (HSPs): __________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | | 318
0 50 100 150 200 250 300
__________________
Annotated Domains:
PFAM pfkB: pfkB family carbohydrate kinase 40..267
PRINTS RIBOKINASE1: Ribokinase motif I - 1 6..27
PRINTS RIBOKINASE2: Ribokinase motif II - 1 35..54
PRINTS RIBOKINASE3: Ribokinase motif III - 1 111..124
PRINTS RIBOKINASE4: Ribokinase motif IV - 1 179..194
PRINTS RIBOKINASE5: Ribokinase motif V - 1 226..237
PRODOM PD001280: SCRK(6) RBSK(5) RFAE(3) 1..104
PRODOM PD100552: RBSK(4) 109..174
PRODOM PD000850: RBSK(5) ADK(4) KDGK(4) 189..294
PRODOM PD100496: RBSK_SCHPO 296..317
PROSITE PFKB_KINASES_2: pfkB family of carbohydr 256..269
__________________
Plus Strand HSPs:
Score = 115 (40.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 28/64 (43%), Positives = 37/64 (57%), Frame = +3
Query: 33 VDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAI 212
V A V VDTT AGD+F+GA SI +P L++ L+FA C AIT +KGA
Sbjct: 247 VSACKVKAVDTTAAGDTFIGAF------SNSIAHGQP-LKDSLEFAAKCSAITVQRKGAA 299
Query: 213 PALP 224
++P
Sbjct: 300 SSIP 303
>gi|5734752|gb|AAD50017.1|AC007651_12 (AC007651) Similar to ribokinase
[Arabidopsis thaliana]
Length = 378
Frame 3 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | 378
0 150 300
Plus Strand HSPs:
Score = 116 (40.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 27/66 (40%), Positives = 39/66 (59%), Frame = +3
Query: 57 VDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAIPALPKEEA 236
VDTTGAGD+F A +V+ +S E L+FA A ++ KGAIP++P ++
Sbjct: 317 VDTTGAGDTFTAAFAVAMVEGKSH-------EECLRFAAAAASLCVQVKGAIPSMPDRKS 369
Query: 237 ALKLIK 254
LKL+K
Sbjct: 370 VLKLLK 375
>gi|730731|sp|P40713|SCRK_ECOLI FRUCTOKINASE >gi|1073355|pir||S52161 probable
fructokinase (EC 2.7.1.4) - Escherichia coli
>gi|608707|emb|CAA57218.1| (X81461) D-fructokinase [Escherichia
coli]
Length = 305
Frame 3 hits (HSPs): ___________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | || 305
0 50 100 150 200 250 300
__________________
Annotated Domains:
BLOCKS BL00583A: pfkB family of carbohydrate ki 27..42
BLOCKS BL00583B: pfkB family of carbohydrate ki 212..224
BLOCKS BL00583C: pfkB family of carbohydrate ki 244..257
DOMO DM00703: PFKBFAMILYOFCARBOHYDRATEKINASES 1..300
PFAM pfkB: pfkB family carbohydrate kinase 28..256
PRODOM PD001280: SCRK(6) RBSK(5) RFAE(3) 4..83
PRODOM PD186175: SCRK(5) KDGK(4) 87..166
PRODOM PD002360: SCRK(3) 169..262
PRODOM PD166476: SCRK_ECOLI 264..304
PROSITE PFKB_KINASES_1: pfkB family of carbohydr 28..52
PROSITE PFKB_KINASES_2: pfkB family of carbohydr 245..258
__________________
Plus Strand HSPs:
Score = 112 (39.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 26/65 (40%), Positives = 37/65 (56%), Frame = +3
Query: 21 FKGSVDAF---HVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAIT 191
++G V F VN VD+TGAGD+FV LL + + DE +R ++ A CGA+
Sbjct: 229 YRGQVHHFAGMSVNCVDSTGAGDAFVAGLLTGL-SSTGLSTDEREMRRIIDLAQRCGALA 287
Query: 192 TT-QKG 206
T Q+G
Sbjct: 288 VTAQRG 293
>gi|10581297|gb|AAG20057.1| (AE005085) sugar kinase; Suk [Halobacterium sp.
NRC-1]
Length = 295
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | | 295
0 50 100 150 200 250
Plus Strand HSPs:
Score = 110 (38.7 bits), Expect = 0.00014, P = 0.00014
Identities = 30/71 (42%), Positives = 40/71 (56%), Frame = +3
Query: 27 GSVD--AFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQ 200
GSV F V+ VDTTGAGD+F +A ++D D R L+F NACGA+
Sbjct: 223 GSVTHPGFAVDPVDTTGAGDAFAAGFVAVVLDGG----DHER---ALEFGNACGALAAQH 275
Query: 201 KGAIPALPKEEAA 239
+GA A + +AA
Sbjct: 276 EGARTAPTRADAA 288
>gi|3915408|sp|O59128|YE59_PYRHO HYPOTHETICAL SUGAR KINASE PH1459
>gi|7434227|pir||F71020 probable fructokinase - Pyrococcus
horikoshii >gi|3257883|dbj|BAA30566.1| (AP000006) 310aa long
hypothetical fructokinase [Pyrococcus horikoshii]
Length = 310
Frame 3 hits (HSPs): ____________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | | | 310
0 50 100 150 200 250 300
__________________
Annotated Domains:
PFAM pfkB: pfkB family carbohydrate kinase 37..256
PRODOM PD001280: SCRK(6) RBSK(5) RFAE(3) 17..90
PRODOM PD186175: SCRK(5) KDGK(4) 95..176
PRODOM PD002360: SCRK(3) 183..259
PRODOM PD100545: YE59_PYRHO 261..309
PROSITE PFKB_KINASES_1: pfkB family of carbohydr 37..61
PROSITE PFKB_KINASES_2: pfkB family of carbohydr 245..258
__________________
Plus Strand HSPs:
Score = 109 (38.4 bits), Expect = 0.00041, P = 0.00041
Identities = 28/71 (39%), Positives = 47/71 (66%), Frame = +3
Query: 33 VDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAI 212
V +++VN +DTTGAGD+F+ ALL I+ + + D L ++ KFAN A++T ++GA
Sbjct: 236 VPSYNVNPLDTTGAGDAFMAALLVGILKLKGL--D---LLKLGKFANLVAALSTQKRGAW 290
Query: 213 PALPKEEAALK 245
+ P+++ LK
Sbjct: 291 -STPRKDELLK 300
>gi|1172869|sp|P44331|RBSK_HAEIN RIBOKINASE >gi|1075217|pir||B64073 ribokinase
(EC 2.7.1.15) - Haemophilus influenzae (strain Rd KW20)
>gi|1573486|gb|AAC22163.1| (U32732) ribokinase (rbsK) [Haemophilus
influenzae Rd]
Length = 306
Frame 3 hits (HSPs): ____________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | | | 306
0 50 100 150 200 250 300
__________________
Annotated Domains:
BLOCKS BL00583A: pfkB family of carbohydrate ki 38..53
BLOCKS BL00583B: pfkB family of carbohydrate ki 214..226
BLOCKS BL00583C: pfkB family of carbohydrate ki 246..259
DOMO DM00703: PFKBFAMILYOFCARBOHYDRATEKINASES 1..296
PFAM pfkB: pfkB family carbohydrate kinase 39..258
PRINTS RIBOKINASE1: Ribokinase motif I - 1 7..28
PRINTS RIBOKINASE2: Ribokinase motif II - 1 34..53
PRINTS RIBOKINASE3: Ribokinase motif III - 1 106..119
PRINTS RIBOKINASE4: Ribokinase motif IV - 1 174..189
PRINTS RIBOKINASE5: Ribokinase motif V - 1 218..229
PRODOM PD001280: SCRK(6) RBSK(5) RFAE(3) 1..95
PRODOM PD100552: RBSK(4) 105..167
PRODOM PD000850: RBSK(5) ADK(4) KDGK(4) 169..286
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 63..70
PROSITE PFKB_KINASES_1: pfkB family of carbohydr 39..63
PROSITE PFKB_KINASES_2: pfkB family of carbohydr 247..260
__________________
Plus Strand HSPs:
Score = 107 (37.7 bits), Expect = 0.00099, P = 0.00099
Identities = 23/74 (31%), Positives = 42/74 (56%), Frame = +3
Query: 33 VDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAI 212
+ F V +DTT AGD+F G + +++++S DE ++F A AI+ T+KGA
Sbjct: 238 IKGFCVQAIDTTAAGDTFNGGFVTALLEEKSF--DE-----AIRFGQAAAAISVTKKGAQ 290
Query: 213 PALPKEEAALKLIK 254
++P + L+ ++
Sbjct: 291 SSIPTRQETLEFLE 304
>gi|11278831|pir||T44955 ribokinase (EC 2.7.1.15) [imported] - Pyrobaculum
aerophilum >gi|4099074|gb|AAD00536.1| (U82374) ribokinase
[Pyrobaculum aerophilum]
Length = 305
Frame 3 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | || 305
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 101 (35.6 bits), Expect = 0.011, P = 0.011
Identities = 28/74 (37%), Positives = 38/74 (51%), Frame = +3
Query: 33 VDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAI 212
VDAF VN VDTTGAGD F A + + + + E L FANA AI T+ A
Sbjct: 234 VDAFKVNAVDTTGAGDCFAAAYITMYLRGRDLYER-------LLFANAAAAIKVTRPSA- 285
Query: 213 PALPKEEAALKLIK 254
A P+ + + ++
Sbjct: 286 RASPRYDEVVAFLE 299
>gi|11356074|pir||D82497 ribokinase VCA0131 [imported] - Vibrio cholerae (group
O1 strain N16961) >gi|9657519|gb|AAF96045.1| (AE004354) ribokinase
[Vibrio cholerae]
Length = 306
Frame 3 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | | | 306
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 101 (35.6 bits), Expect = 0.011, P = 0.011
Identities = 25/64 (39%), Positives = 37/64 (57%), Frame = +3
Query: 33 VDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAI 212
+ F V DTT AGD+F GAL+ +L++ P L +KFA+A AI+ T+ GA
Sbjct: 237 IPGFVVKATDTTAAGDTFNGALVT------GLLQEMP-LESAIKFAHAAAAISVTRFGAQ 289
Query: 213 PALP 224
++P
Sbjct: 290 TSIP 293
>gi|7473785|pir||A75599 ribokinase - Deinococcus radiodurans (strain R1)
>gi|6460552|gb|AAF12258.1|AE001862_84 (AE001862) ribokinase
[Deinococcus radiodurans]
Length = 300
Frame 3 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | | 300
0 50 100 150 200 250
Plus Strand HSPs:
Score = 99 (34.8 bits), Expect = 0.020, P = 0.020
Identities = 29/70 (41%), Positives = 40/70 (57%), Frame = +3
Query: 39 AFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAIPA 218
A V DTTGAGD+FVG L+A ++ EP L++A A A+ T++GA PA
Sbjct: 236 ALPVPVRDTTGAGDTFVGVLVA------ALSRGEP-FAAALRWAVAGSALACTREGAQPA 288
Query: 219 LP-KEEAALKL 248
+P +EE L
Sbjct: 289 MPGREEIQANL 299
>gi|11357296|pir||T47568 fructokinase-like protein - Arabidopsis thaliana
>gi|6822055|emb|CAB70983.1| (AL132957) fructokinase-like protein
[Arabidopsis thaliana]
Length = 471
Frame 3 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | 471
0 150 300 450
Plus Strand HSPs:
Score = 99 (34.8 bits), Expect = 0.041, P = 0.041
Identities = 22/65 (33%), Positives = 32/65 (49%), Frame = +3
Query: 54 TVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAIPALPKEE 233
T D TG+GD+ V ++ K+ + ED+ + L+FA A G I GA+ P E
Sbjct: 397 TCDRTGSGDAVVAGIMRKLTTCPEMFEDQDVMERQLRFAVAAGIIAQWTIGAVRGFPTES 456
Query: 234 AALKL 248
A L
Sbjct: 457 ATQNL 461
>gi|10383797 ref|NP_009965.2| ribokinase; Rbk1p [Saccharomyces cerevisiae]
Length = 333
Frame 3 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | 333
0 150 300
Plus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.090, P = 0.086
Identities = 20/60 (33%), Positives = 36/60 (60%), Frame = +3
Query: 45 HVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAIPALP 224
+V+ VDTTGAGD+F+G L+ ++ ++ L +KF+ ++T +KGA ++P
Sbjct: 272 NVSVVDTTGAGDTFLGGLVTQLYQGET-------LSTAIKFSTLASSLTIQRKGAAESMP 324
>gi|11278832|pir||T44792 2-keto-3-deoxygluconate kinase [imported] - Haloferax
alicantei >gi|1772652|gb|AAB40122.1| (U70664)
2-keto-3-deoxygluconate kinase [Haloferax alicantei]
Length = 318
Frame 3 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | | | 318
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 94 (33.1 bits), Expect = 0.11, P = 0.11
Identities = 23/73 (31%), Positives = 39/73 (53%), Frame = +3
Query: 42 FHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAIPAL 221
F +TVD G GD+FVGA L++++ DEP + L + A A+ T G + +
Sbjct: 248 FETDTVDAIGTGDAFVGAFLSRLI------ADEP-VETALAYGAATAALKRTVHGDLAVV 300
Query: 222 PKEEAALKLIKGG 260
+E ++++GG
Sbjct: 301 TPDEVE-RVLRGG 312
>gi|132128|sp|P25332|RBSK_YEAST PROBABLE RIBOKINASE >gi|279503|pir||KIBYRB
ribokinase (EC 2.7.1.15) - yeast (Saccharomyces cerevisiae)
>gi|4492|emb|CAA40228.1| (X56909) ribokinase [Saccharomyces
cerevisiae] >gi|1907178|emb|CAA42303.1| (X59720) YCR036w, len:333
[Saccharomyces cerevisiae]
Length = 333
Frame 3 hits (HSPs): _________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | 333
0 150 300
__________________
Annotated Domains:
BLOCKS BL00583A: pfkB family of carbohydrate ki 36..51
BLOCKS BL00583B: pfkB family of carbohydrate ki 109..121
BLOCKS BL00583C: pfkB family of carbohydrate ki 276..289
DOMO DM00703: PFKBFAMILYOFCARBOHYDRATEKINASES 1..326
PFAM pfkB: pfkB family carbohydrate kinase 37..288
PRINTS RIBOKINASE1: Ribokinase motif I - 1 5..26
PRINTS RIBOKINASE2: Ribokinase motif II - 1 32..51
PRINTS RIBOKINASE3: Ribokinase motif III - 1 111..124
PRINTS RIBOKINASE4: Ribokinase motif IV - 1 182..197
PRINTS RIBOKINASE5: Ribokinase motif V - 1 245..256
PRODOM PD001280: SCRK(6) RBSK(5) RFAE(3) 3..102
PRODOM PD100553: RBSK_YEAST 104..222
PRODOM PD000850: RBSK(5) ADK(4) KDGK(4) 224..315
PROSITE PFKB_KINASES_2: pfkB family of carbohydr 277..290
__________________
Plus Strand HSPs:
Score = 94 (33.1 bits), Expect = 0.12, P = 0.11
Identities = 20/60 (33%), Positives = 36/60 (60%), Frame = +3
Query: 45 HVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAIPALP 224
+V+ VDTTGAGD+F+G L+ ++ ++ L +KF+ ++T +KGA ++P
Sbjct: 272 NVSVVDTTGAGDTFLGGLVTQLYQGET-------LSMAIKFSTLASSLTIQRKGAAESMP 324
>gi|12620595|gb|AAG60871.1|AF322012_176 (AF322013) ID402 [Bradyrhizobium
japonicum]
Length = 313
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | | | 313
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 93 (32.7 bits), Expect = 0.15, P = 0.14
Identities = 28/75 (37%), Positives = 39/75 (52%), Frame = +3
Query: 39 AFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAIPA 218
AF V VDTT AGD+F GA A S+ P +RE +K A A A+ T++GA +
Sbjct: 241 AFPVKVVDTTAAGDAFNGAFAA------SLAHRLP-IREAIKKALAVAALYVTRRGAQRS 293
Query: 219 LPKEEAALKLIKGGS 263
+P A + + S
Sbjct: 294 MPSSWAVDEFLNSQS 308
>gi|10176352|dbj|BAB07447.1| (AP001519) ribokinase [Bacillus halodurans]
Length = 294
Frame 3 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | | 294
0 50 100 150 200 250
Plus Strand HSPs:
Score = 91 (32.0 bits), Expect = 0.24, P = 0.22
Identities = 23/64 (35%), Positives = 34/64 (53%), Frame = +3
Query: 33 VDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAI 212
V++F V VDTTGAGD+F GA + ++E ++FANA A++ GA
Sbjct: 225 VESFRVEPVDTTGAGDTFNGAFAVALGGGT--------VKEAVRFANAAAALSVQSFGAQ 276
Query: 213 PALP 224
+P
Sbjct: 277 GGMP 280
>gi|2641973|dbj|BAA23613.1| (AB005149) guanosine kinase [Exiguobacterium
acetylicum]
Length = 303
Frame 3 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | || 303
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 0.47, P = 0.37
Identities = 23/65 (35%), Positives = 36/65 (55%), Frame = +3
Query: 27 GSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKG 206
G V V VD+TGAGDSF A+L+++ ++S E L+ +K A I +T+ G
Sbjct: 239 GHVGTKKVKVVDSTGAGDSFFSAVLSELTQEKSA---EEALKLGMKVA--AEVIASTENG 293
Query: 207 AIPAL 221
+P +
Sbjct: 294 LVPEM 298
>gi|11352488|pir||B83403 ribokinase PA1950 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9947947|gb|AAG05338.1|AE004621_9 (AE004621)
ribokinase [Pseudomonas aeruginosa]
Length = 308
Frame 3 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | | | 308
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 0.48, P = 0.38
Identities = 26/78 (33%), Positives = 40/78 (51%), Frame = +3
Query: 24 KGSVDAF---HVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITT 194
+G V+ F V +DTT AGD+FVG A + L++ +R F A AI+
Sbjct: 233 EGRVEHFPVARVKALDTTAAGDTFVGGFAAALARG---LDEAAAIR----FGQAAAAISV 285
Query: 195 TQKGAIPALPKEEAALKLIKG 257
T+ GA ++P E + + G
Sbjct: 286 TRLGAQTSIPSREEVERALVG 306
WARNING: HSPs involving 16 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.99
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.344 0.151 0.481
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.365 0.165 0.673
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.360 0.163 0.567
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.357 0.160 0.581
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.349 0.153 0.543
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.335 0.143 0.438
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 154 152 10. 74 3 12 22 0.094 34
30 0.12 36
+2 0 154 153 10. 74 3 12 22 0.095 34
30 0.12 36
+1 0 155 153 10. 74 3 12 22 0.095 34
30 0.12 36
-1 0 155 153 10. 74 3 12 22 0.095 34
30 0.12 36
-2 0 154 152 10. 74 3 12 22 0.094 34
30 0.12 36
-3 0 154 153 10. 74 3 12 22 0.095 34
30 0.12 36
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 66
No. of states in DFA: 592 (58 KB)
Total size of DFA: 183 KB (192 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 147.08u 0.98s 148.06t Elapsed: 00:00:33
Total cpu time: 147.13u 1.02s 148.15t Elapsed: 00:00:33
Start: Thu Jan 17 09:56:38 2002 End: Thu Jan 17 09:57:11 2002
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000