| Kingdom |
Category |
Genus/Species |
Count |
| Archaea |
|
|
10 |
| |
Euryarchaeota |
|
10 |
| |
|
Haloarcula marismortui (hma) |
2 |
| |
|
Methanosarcina barkeri (mba) |
2 |
| |
|
Candidatus Methanoregula boonei (mbn) |
2 |
| |
|
Methanospirillum hungatei (mhu) |
1 |
| |
|
Methanopyrus kandleri (mka) |
1 |
| |
|
Methanobacterium thermoautotrophicum (mth) |
1 |
| |
|
Uncultured methanogenic archaeon RC-I (rci) |
1 |
| Bacteria |
|
|
6977 |
| |
Acidobacteria |
|
19 |
| |
|
Acidobacteria bacterium (aba) |
6 |
| |
|
Solibacter usitatus (sus) |
13 |
| |
Actinobacteria |
|
43 |
| |
|
Clavibacter michiganensis (cmi) |
1 |
| |
|
Frankia alni (fal) |
1 |
| |
|
Frankia sp. EAN1pec (fre) |
2 |
| |
|
Mycobacterium abscessus ATCC 19977T (mab) |
1 |
| |
|
Mycobacterium avium 104 (mav) |
1 |
| |
|
Mycobacterium bovis BCG Pasteur 1173P2 (mbb) |
1 |
| |
|
Mycobacterium gilvum (mgi) |
2 |
| |
|
Mycobacterium sp. KMS (mkm) |
2 |
| |
|
Mycobacterium smegmatis (msm) |
4 |
| |
|
Mycobacterium ulcerans (mul) |
1 |
| |
|
Mycobacterium vanbaalenii (mva) |
1 |
| |
|
Nocardioides sp. JS614 (nca) |
2 |
| |
|
Nocardia farcinica (nfa) |
2 |
| |
|
Rhodococcus sp. RHA1 (rha) |
5 |
| |
|
Rubrobacter xylanophilus (rxy) |
5 |
| |
|
Salinispora arenicola (saq) |
1 |
| |
|
Streptomyces coelicolor (sco) |
3 |
| |
|
Saccharopolyspora erythraea (sen) |
3 |
| |
|
Streptomyces avermitilis (sma) |
5 |
| |
Bacteroides |
|
4 |
| |
|
Bacteroides vulgatus (bvu) |
1 |
| |
|
Cytophaga hutchinsonii (chu) |
1 |
| |
|
Flavobacterium johnsoniae (fjo) |
1 |
| |
|
Salinibacter ruber (sru) |
1 |
| |
Cyanobacteria |
|
19 |
| |
|
Acaryochloris marina (amr) |
3 |
| |
|
Anabaena sp. PCC7120 (ana) |
4 |
| |
|
Anabaena variabilis (ava) |
3 |
| |
|
Gloeobacter violaceus (gvi) |
2 |
| |
|
Synechococcus elongatus PCC7942 (syf) |
2 |
| |
|
Synechocystis sp. PCC6803 (syn) |
1 |
| |
|
Synechococcus sp. PCC7002 (syp) |
3 |
| |
|
Thermosynechococcus elongatus (tel) |
1 |
| |
Deinococcus-Thermus |
|
3 |
| |
|
Deinococcus geothermalis (dge) |
1 |
| |
|
Deinococcus radiodurans (dra) |
1 |
| |
|
Thermus thermophilus HB27 (tth) |
1 |
| |
Firmicutes |
|
12 |
| |
|
Alkaliphilus metalliredigens (amt) |
1 |
| |
|
Bacillus cereus subsp. cytotoxis NVH 391-98 (bcy) |
1 |
| |
|
Bacillus thuringiensis 97-27 (btk) |
1 |
| |
|
Clostridium beijerinckii (cbe) |
1 |
| |
|
Carboxydothermus hydrogenoformans (chy) |
2 |
| |
|
Clostridium perfringens 13 (cpe) |
1 |
| |
|
Geobacillus kaustophilus (gka) |
1 |
| |
|
Geobacillus thermodenitrificans (gtn) |
1 |
| |
|
Lactococcus lactis subsp. cremoris MG1363 (llm) |
1 |
| |
|
Lysinibacillus sphaericus (lsp) |
1 |
| |
|
Symbiobacterium thermophilum (sth) |
1 |
| |
Green nonsulfur bacteria |
|
1 |
| |
|
Dehalococcoides ethenogenes (det) |
1 |
| |
Proteobacteria |
|
6875 |
| |
|
Acidovorax avenae (aav) |
10 |
| |
|
Acinetobacter baumannii AYE (aby) |
3 |
| |
|
Acinetobacter sp. ADP1 (aci) |
2 |
| |
|
Acidiphilium cryptum JF-5 (acr) |
12 |
| |
|
Anaeromyxobacter sp. Fw109-5 (afw) |
2 |
| |
|
Acidovorax sp. JS42 (ajs) |
4 |
| |
|
Aeromonas salmonicida (asa) |
1 |
| |
|
Agrobacterium tumefaciens C58 (Cereon) (atc) |
10 |
| |
|
Agrobacterium tumefaciens C58 (UWash/Dupont) (atu) |
1 |
| |
|
Azorhizobium caulinodans (azc) |
14 |
| |
|
Azoarcus sp. BH72 (azo) |
7 |
| |
|
Burkholderia cepacia (bam) |
127 |
| |
|
Bdellovibrio bacteriovorus (bba) |
1 |
| |
|
Bordetella bronchiseptica (bbr) |
11 |
| |
|
Bradyrhizobium sp. BTAi1 (bbt) |
11 |
| |
|
Burkholderia cenocepacia HI2424 (bch) |
54 |
| |
|
Burkholderia cenocepacia MC0-3 (bcm) |
89 |
| |
|
Burkholderia cenocepacia AU1054 (bcn) |
4 |
| |
|
Brucella canis (bcs) |
1 |
| |
|
Bradyrhizobium japonicum (bja) |
30 |
| |
|
Burkholderia mallei NCTC 10247 (bmn) |
18 |
| |
|
Burkholderia multivorans (bmu) |
112 |
| |
|
Burkholderia mallei SAVP1 (bmv) |
1 |
| |
|
Brucella ovis (bov) |
1 |
| |
|
Bordetella parapertussis (bpa) |
2 |
| |
|
Burkholderia pseudomallei 668 (bpd) |
37 |
| |
|
Bordetella pertussis (bpe) |
1 |
| |
|
Burkholderia pseudomallei 1106a (bpl) |
13 |
| |
|
Burkholderia pseudomallei 1710b (bpm) |
11 |
| |
|
Burkholderia pseudomallei K96243 (bps) |
15 |
| |
|
Bordetella petrii (bpt) |
46 |
| |
|
Bradyrhizobium sp. ORS278 (bra) |
11 |
| |
|
Burkholderia thailandensis (bte) |
75 |
| |
|
Bartonella tribocorum (btr) |
1 |
| |
|
Burkholderia sp. 383 (bur) |
170 |
| |
|
Burkholderia vietnamiensis (bvi) |
111 |
| |
|
Burkholderia xenovorans (bxe) |
5075 |
| |
|
Caulobacter sp. K31 (cak) |
9 |
| |
|
Coxiella burnetii Dugway 5J108-111 (cbd) |
1 |
| |
|
Citrobacter koseri ATCC BAA-895 (cko) |
2 |
| |
|
Colwellia psychrerythraea (cps) |
3 |
| |
|
Chromohalobacter salexigens (csa) |
4 |
| |
|
Chromobacterium violaceum (cvi) |
9 |
| |
|
Delftia acidovorans (dac) |
19 |
| |
|
Dechloromonas aromatica (dar) |
2 |
| |
|
Azoarcus sp. EbN1 (eba) |
5 |
| |
|
Escherichia coli SECEC (ecm) |
4 |
| |
|
Escherichia coli APEC O1 (ecv) |
4 |
| |
|
Escherichia coli HS (ecx) |
2 |
| |
|
Erythrobacter litoralis (eli) |
1 |
| |
|
Enterobacter sakazakii (esa) |
1 |
| |
|
Granulobacter bethesdensis (gbe) |
3 |
| |
|
Gluconacetobacter diazotrophicus (gdi) |
8 |
| |
|
Geobacter metallireducens (gme) |
4 |
| |
|
Gluconobacter oxydans (gox) |
4 |
| |
|
Geobacter uraniumreducens (gur) |
4 |
| |
|
Herminiimonas arsenicoxydans (har) |
16 |
| |
|
Hahella chejuensis (hch) |
6 |
| |
|
Halorhodospira halophila (hha) |
1 |
| |
|
Hyphomonas neptunium (hne) |
1 |
| |
|
Legionella pneumophila Lens (lpf) |
2 |
| |
|
Legionella pneumophila Paris (lpp) |
2 |
| |
|
Magnetospirillum magneticum (mag) |
4 |
| |
|
Marinobacter aquaeolei (maq) |
1 |
| |
|
Methylococcus capsulatus (mca) |
4 |
| |
|
Mesorhizobium sp. BNC1 (mes) |
5 |
| |
|
Methylobacterium extorquens (mex) |
5 |
| |
|
Methylobacillus flagellatus (mfa) |
5 |
| |
|
Magnetococcus sp. MC-1 (mgm) |
2 |
| |
|
Mesorhizobium loti (mlo) |
17 |
| |
|
Maricaulis maris (mmr) |
3 |
| |
|
Minibacterium massiliensis (mms) |
19 |
| |
|
Marinomonas sp. MWYL1 (mmw) |
2 |
| |
|
Methylibium petroleiphilum (mpt) |
10 |
| |
|
Methylobacterium radiotolerans (mrd) |
20 |
| |
|
Myxococcus xanthus (mxa) |
1 |
| |
|
Nitrosomonas eutropha (net) |
2 |
| |
|
Nitrosomonas europaea (neu) |
2 |
| |
|
Nitrobacter hamburgensis (nha) |
2 |
| |
|
Nitrosospira multiformis (nmu) |
1 |
| |
|
Nitrosococcus oceani (noc) |
1 |
| |
|
Ochrobactrum anthropi (oan) |
3 |
| |
|
Pseudomonas aeruginosa PAO1 (pae) |
4 |
| |
|
Pseudomonas aeruginosa PA7 (pap) |
5 |
| |
|
Pseudoalteromonas atlantica (pat) |
2 |
| |
|
Pseudomonas aeruginosa UCBPP-PA14 (pau) |
3 |
| |
|
Pelobacter carbinolicus (pca) |
4 |
| |
|
Paracoccus denitrificans (pde) |
5 |
| |
|
Pseudomonas entomophila (pen) |
3 |
| |
|
Pseudomonas fluorescens Pf-5 (pfl) |
10 |
| |
|
Pseudomonas fluorescens PfO-1 (pfo) |
12 |
| |
|
Pseudoalteromonas haloplanktis (pha) |
1 |
| |
|
Parvibaculum lavamentivorans (pla) |
3 |
| |
|
Photorhabdus luminescens (plu) |
4 |
| |
|
Pseudomonas mendocina (pmy) |
7 |
| |
|
Polaromonas naphthalenivorans (pna) |
10 |
| |
|
Polynucleobacter sp. QLW-P1DMWA-1 (pnu) |
6 |
| |
|
Polaromonas sp. JS666 (pol) |
27 |
| |
|
Pseudomonas putida F1 (ppf) |
3 |
| |
|
Pseudomonas putida GB-1 (ppg) |
3 |
| |
|
Photobacterium profundum (ppr) |
1 |
| |
|
Pseudomonas putida KT2440 (ppu) |
4 |
| |
|
Pseudomonas putida W619 (ppw) |
7 |
| |
|
Psychrobacter sp. PRwf-1 (prw) |
1 |
| |
|
Pseudomonas stutzeri (psa) |
12 |
| |
|
Pseudomonas syringae pv. syringae B728a (psb) |
10 |
| |
|
Pseudomonas syringae pv. phaseolicola 1448A (psp) |
5 |
| |
|
Pseudomonas syringae pv. tomato DC3000 (pst) |
9 |
| |
|
Roseobacter denitrificans (rde) |
1 |
| |
|
Ralstonia eutropha H16 (reh) |
45 |
| |
|
Rhizobium etli (ret) |
6 |
| |
|
Ralstonia eutropha JMP134 (reu) |
69 |
| |
|
Rickettsia felis (rfe) |
1 |
| |
|
Rhodoferax ferrireducens (rfr) |
9 |
| |
|
Rhizobium leguminosarum (rle) |
10 |
| |
|
Ralstonia metallidurans (rme) |
55 |
| |
|
Rhodopseudomonas palustris CGA009 (rpa) |
2 |
| |
|
Rhodopseudomonas palustris HaA2 (rpb) |
5 |
| |
|
Rhodopseudomonas palustris BisB18 (rpc) |
3 |
| |
|
Rhodopseudomonas palustris BisB5 (rpd) |
6 |
| |
|
Rhodopseudomonas palustris BisA53 (rpe) |
2 |
| |
|
Rhodospirillum rubrum (rru) |
7 |
| |
|
Ralstonia solanacearum (rso) |
40 |
| |
|
Rhodobacter sphaeroides ATCC 17025 (rsq) |
2 |
| |
|
Syntrophus aciditrophicus (sat) |
6 |
| |
|
Shewanella baltica OS185 (sbm) |
1 |
| |
|
Sorangium cellulosum (scl) |
10 |
| |
|
Salmonella enterica subsp. arizonae (ses) |
2 |
| |
|
Shewanella frigidimarina (sfr) |
1 |
| |
|
Syntrophobacter fumaroxidans (sfu) |
4 |
| |
|
Sodalis glossinidius (sgl) |
1 |
| |
|
Silicibacter pomeroyi (sil) |
1 |
| |
|
Sinorhizobium medicae (smd) |
12 |
| |
|
Sinorhizobium meliloti (sme) |
9 |
| |
|
Serratia proteamaculans (spe) |
11 |
| |
|
Salmonella enterica serovar Paratyphi B (spq) |
4 |
| |
|
Shewanella sediminis (sse) |
1 |
| |
|
Shigella sonnei (ssn) |
1 |
| |
|
Salmonella enterica serovar Typhi Ty2 (stt) |
1 |
| |
|
Sphingomonas wittichii (swi) |
5 |
| |
|
Thiobacillus denitrificans (tbd) |
3 |
| |
|
Verminephrobacter eiseniae (vei) |
13 |
| |
|
Vibrio fischeri (vfi) |
1 |
| |
|
Vibrio parahaemolyticus (vpa) |
1 |
| |
|
Xanthomonas axonopodis (xac) |
8 |
| |
|
Xanthobacter autotrophicus (xau) |
19 |
| |
|
Xanthomonas campestris pv. campestris 8004 (xcb) |
1 |
| |
|
Xanthomonas campestris pv. vesicatoria (xcv) |
3 |
| |
|
Xylella fastidiosa 9a5c (xfa) |
4 |
| |
|
Xanthomonas oryzae MAFF311018 (xom) |
1 |
| |
|
Yersinia enterocolitica (yen) |
2 |
| |
|
Yersinia pseudotuberculosis IP31758 (ypi) |
3 |
| |
|
Yersinia pseudotuberculosis IP32953 (yps) |
1 |
| |
|
Yersinia pseudotuberculosis YPIII (ypy) |
1 |
| |
Spirochete |
|
1 |
| |
|
Leptospira interrogans serovar Copenhageni (lic) |
1 |
| Eukaryotes |
|
|
14 |
| |
Animals |
|
6 |
| |
|
Bos taurus (cow) (bta) |
1 |
| |
|
Drosophila melanogaster (fruit fly) (dme) |
1 |
| |
|
Danio rerio (zebrafish) (dre) |
1 |
| |
|
Monodelphis domestica (opossum) (mdo) |
1 |
| |
|
Mus musculus (mouse) (mmu) |
1 |
| |
|
Rattus norvegicus (rat) (rno) |
1 |
| |
Fungi |
|
3 |
| |
|
Aspergillus nidulans (ani) |
1 |
| |
|
Aspergillus oryzae (aor) |
1 |
| |
|
Magnaporthe grisea (mgr) |
1 |
| |
Plants |
|
2 |
| |
|
Chlamydomonas reinhardtii (cre) |
1 |
| |
|
Ostreococcus lucimarinus (olu) |
1 |
| |
Protists |
|
3 |
| |
|
Dictyostelium discoideum (ddi) |
1 |
| |
|
Leishmania major (lma) |
1 |
| |
|
Trypanosoma cruzi (tcr) |
1 |
| NULL |
|
|
244 |
| TOTAL |
|
|
7245 |
![[space]](http://compbio.ornl.gov/public/images/bluespacer.gif){kind=small}
![[space]](http://maple.lsd.ornl.gov/common/images/bluespacer.gif){kind=small}