prokMSA_id: 57773
prokMSAname: Streptomyces coelicolor str. A3(2)

GenBank ACCESSION: AL939108.1
GenBank GI: 24413740
Pubmed/Medline: 12000953 21996410
RDP_id: S000540316
NCBI_tax_id: 100226
Study_id: 20296

Chimera Test Result
bellerophon=over 97% similar to a Core Set template along >1250 nt, not chimeric
bel3_div_ratio=

G2_chip_tax_string=NA
Hugenholtz_tax_string=Bacteria; Actinobacteria; Actinobacteridae; Streptomycineae
Ludwig_tax_string=prokaryotes; Bacteria; Actinobacteria; Streptomycetatceae; Streptomyces griseus et rel.; Streptomyces roseoflavus et rel.; Streptomyces ambofaciens et rel.; Streptomyces coelicolor et rel.
Pace_tax_string=Unclassified
RDP_tax_string=Bacteria; Actinobacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Streptomycineae; Streptomycetaceae; Streptomyces
ncbi_tax_string=Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Streptomycineae; Streptomycetaceae; Streptomyces

authors(alphabetically)=Barrell,B.G., Bateman,A., Bentley,S.D., Brown,S., Cerdeno-Tarraga,A.M., Challis,G.L., Chandra,G., Chater,K.F., Chen,C.W., Collins,M., Cronin,A., Fraser,A., Goble,A., Harper,D., Harris,D.E., Hidalgo,J., Hopwood,D.A., Hornsby,T., Howarth,S., Huang,C.H., James,K.D., Kieser,H., Kieser,T., Larke,L., Murphy,L., O'Neil,S., Oliver,K., Parkhill,J., Quail,M.A., Rabbinowitsch,E., Rajandream,M.A., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Squares,R., Squares,S., Taylor,K., Thomson,N.R., Warren,T., Wietzorrek,A., Woodward,J.
blast_perc_ident_to_template=98.5
contact_info=Submitted on behalf of the Streptomyces sequencing team, Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA E-mail: sdb@sanger.ac.uk
create_date=25-OCT-2002
db_name=164
decision=named_isolate
description=Streptomyces coelicolor A3(2) complete genome; segment 5/29
journal=Nature 417 (6885), 141-147 (2002)
longest_insertion=2
ncbi_acc=AL939108
non_ACGT_percent=0.0000
organism=Streptomyces coelicolor A3(2)
perc_ident_to_invariant_core=98.9
prokMSA_id=57773
prokMSAname=Streptomyces coelicolor str. A3(2)
small_gap_intrusions=6
source=Streptomyces coelicolor A3(2)
span_aligned=complement(269769..271324)
strain=A3(2)
submit_date=09-MAY-2002
template=11937
timestamp=20090128210833
title=Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)
unaligned_length=1556
update_date=16-APR-2005

>Streptomyces coelicolor str. A3(2) prokMSA_id:57773 AL939108.1
ACATTCACGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGC
TTAACACATGCAAGTCGAACGATGAACCACTTCGGTGGGGATTAGTGGCG
AACGGGTGAGTAACACGTGGGCAATCTGCCCTTCACTCTGGGACAAGCCC
TGGAAACGGGGTCTAATACCGGATACTGACCCTCGCAGGCATCTGCGAGG
GTCGAAAGCTCCGGCGGTGAAGGATGAGCCCGCGGCCTATCAGCTTGTTG
GTGAGGTAATGGCTCACCAAGGCGACGACGGGTAGCCGGCCTGAGAGGGC
GACCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG
CAGTGGGGAATATTGCACAATGGGCGAAAGCCTGATGCAGCGACGCCGCG
TGAGGGATGACGGCCTTCGGGTTGTAAACCTCTTTCAGCAGGGAAGAAGC
GAAAGTGACGGTACCTGCAGAAGAAGCGCCGGCTAACTACGTGCCAGCAG
CCGCGGTAATACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAA
GAGCTCGTAGGCGGCTTGTCACGTCGGTTGTGAAAGCCCGGGGCTTAACC
CCGGGTCTGCAGTCGATACGGGCAGGCTAGAGTTCGGTAGGGGAGATCGG
AATTCCTGGTGTAGCGGTGAAATGCGCAGATATCAGGAGGAACACCGGTG
GCGAAGGCGGATCTCTGGGCCGATACTGACGCTGAGGAGCGAAAGCGTGG
GGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGGTGGGC
ACTAGGTGTGGGCAACATTCCACGTTGTCCGTGCCGCAGCTAACGCATTA
AGTGCCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGGAATTG
ACGGGGGCCCGCACAAGCGGCGGAGCATGTGGCTTAATTCGACGCAACGC
GAAGAACCTTACCAAGGCTTGACATACACCGGAAAGCATCAGAGATGGTG
CCCCCCTTGTGGTCGGTGTACAGGTGGTGCATGGCTGTCGTCAGCTCGTG
TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCCCGTG
TTGCCAGCAAGCCCTTCGGGGTGTTGGGGACTCACGGGAGACCGCCGGGG
TCAACTCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGCCCCTTATGT
CTTGGGCTGCACACGTGCTACAATGGCCGGTACAATGAGCTGCGATACCG
CAAGGTGGAGCGAATCTCAAAAAGCCGGTCTCAGTTCGGATTGGGGTCTG
CAACTCGACCCCATGAAGTCGGAGTCGCTAGTAATCGCAGATCAGCATTG
CTGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACGTCACG
AAAGTCGGTAACACCCGAAGCCGGTGGCCCAACCCCTTGTGGGAGGGAGC
TGTCGAAGGTGGGACTGGCGATTGGGACGAAGTCGTAACAAGGTAGCCGT
ACCGGAAGGTGCGGCTGGATCACCTCCTTTCTAAGGAGCACATAGCCGAC
TGCAGG

>Streptomyces coelicolor str. A3(2) prokMSA_id:57773 AL939108.1
..................................................
................................................AC
ATTCACGGAGAGTTT-GA--T-CC-T-G-GCTC-AG-GA-CGAA-C-GC-
-TGG-C--G-GC-G-TG--C----T-T--AACACA-T-GC-A-AGT-CGA
-A-CGA---------T-G---AA-C-------------------------
--------C-AC--------------------------------------
--------------TTC-G-------------------------------
--------------------------------------------------
-GTG-----------------------GG--G--AT--T--AG-T-GG-C
-GA-A--C-------------GGG-TGAGT-A--AC-AC-G-T-G-GG--
-CAA---TCT-G--C-C-CTT--CA-C-----------------------
-------------------------------------------T-CT---
-GGG-AC-AA-GCC-------------------------C-T-G------
-----------------GAA-A---CGG-GGT-CTAA-TA---CC-G--G
-AT-A---------------------------------CTGA-C-C--C-
-T-----------------CG---CA-G----------------------
--------------------------------------------------
-----------------------------------------------G-C
A-T-----------------------------------------------
--------------------------------------------------
-------------------------------------C-T-G--C-G---
------------A--G-G-G-T-C--------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
---------------------------GAAA--G--C-------------
--------------------------------------------------
--------------------------------------------------
----------------------TCC-G-----------------------
--------------------------------------------------
--------------------------------------------------
-------G---C-G--------------G----T-G---A-AG-G---AT
---G-A-----G-CCC-GCG--G-CCT--A------TC--A--G-CT-T-
---G---TTGG-T-G-AG-G-T----AAT-GG-C-T-C-ACCA--A-GG-
C-G--A-CG-A------------CGG-G-T------AG-CC-G-G-CCT-
G-AG----A--GG-GC--G-AC-C-GG-CCAC-A-CTGGG---AC-TG-A
-GA-C-AC-G-G-CCCAGA-CTCC-TAC-G--G-G-A-G-GC-A-GC-A-
G-TG---GG-G-A-ATA-TTGCA-C-AA-T-GG--GC-GA-A----A-G-
CC-T-GA-TG-CA-GCGA-CGCC-G-CG-T---G-A-G--G--GA-T-G-
-A--C-G-G-CC-----TT-CG---------G-G-T-T-G-T--A---AA
-C-CTC--------TT-TC-A-G--C-AGG----GA-A--G---AAGC--
------------------G--AA---------------------------
-AGT-GA-CG-GT-A-C-CT-G-CA-G---------AA-----------G
AAGC-GCC-GG-C-TAA---C--T-ACGT--GCCA--G-C---A--GCCG
---C-GG--TA-AT--AC---GT-AG-GGC-GCA-A-G-CG-TTGT-C-C
GG-AA-TT-A--T-T--GGGC-GTA----AA-GAGC-TC--G-TA-G-G-
C-G------------G--C-TT-G-T-C-AC----G-T-C-G---G-TTG
-TG-A-AA-GC--CC-GGG-G-----------------------------
---------------------------------------CT-T-AA----
--------------------------------------------------
-------------------CC-C-C-GG-GT-C----T-G-C-A-G-T--
------C--GA-T-A-C-G-G-GCA--G-G-C------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
---------------------T-A-G-A-G-T-T-----C-GG--TA-G-
G------------G-GA-G-AT-C----GG--AATT-CCT-G-GT--GT-
A-GCG-GTGAAA-TG-CGC-AGAT-A-TC-A-GGA--GG-A-AC-A-CC-
GG--T--G--GC-GAA-G--G-C---G----G--A-T-CTCTG------G
-GC-CG--------------------------------------------
------------------AT-A-C-T--GA--CG-----CT-GA-GG--A
-G-CGA--AA-G-C--------------G-TGGG-GAG-C-G-AACA--G
G-ATTA-G-ATA-C-----CC-T-G-GTA-G-T----C-CA--C-G-CCG
-T-AAA--C-GGTG-GG--CA-CT---------A-GG--T--G-T-GG-G
-CA-A--C------------------------------------------
-------------------------------------------ATTC-CA
-C------------------------------------------------
--------------------------------------------------
----------------------------------------------G-T-
T-GT--C-C-G-T-GC-C------GC--A----GC-TAA--CG--CA-T-
-T--AA-GT--G----C-CCC-GCC-T-G-GG-GAG-TA---CGG-----
C-C--G-C-A-A-GGC-T--AAA-ACTC-AAA---------GGAA-TTG-
ACGGG-G-G-CCCG----C-A--C-A-A-GCG-GC-G--G--AG-CA-T-
-GT-GGC-TT-AATT-C-G-ACG-CAAC-G-CG-A-AG-A-A-CC-TT-A
-CC-AAGGC-TT-G-AC-A-T-A------------C-ACC-G-G------
-------A-AA-G-C-A--TC--A-GA-G-A-T--G-G-T--G-C-C-C-
---------CC-------------------------------------C-
-TT-GT-----------------------------------------GG-
------------TC-GGT---G--TA------------------------
---------------------------C-A-G-G-T-GGTG-CA-TGG-C
T--GTC-GTC-A-GC-TC---G-TG-TC-G--TGA-GA-TGT-T-GG-G-
TT-AA-GT-CCCGC-AA--------C-GAG-CGC-A-ACC-C-T-TG--T
C--C-CGTG--T-T-G-C-C---AG----CAA--GC-CC-----------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
----------------TTCG------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------GG---G---TG---T----T-G--------
----G----G---G-A--CT---------------C-A-C-G-G-GA-G-
-AC-C-G-CCG--G-G----------------------------------
--G-T---CAA----------------------------------C-T-C
-G--G-A-GG-A--AGG-T--GGGG-A-CGAC-GTC--AAGT-C---ATC
-A-T-G-C-C-C-CTT----AT-G--TC-T-T-GG-GC-TG-CAC-ACGT
G-C--TA--CAATG---G-CCGG-T-A--C-AAT-GA-GC----------
--------------------------------------------------
--------------------------------------T-G-C-G-A--T
-ACCG-C--A---------------------------------------A
-GG-T-G-----------G--A-G-CG---A----------A--TCT-C-
-----A-A-AAAGC-CG-G-T-C-T-CAG-TTC--------GGA-T-TGG
GG-TC--T-GCAA-CT-C--------------------------------
--------------------------------------------------
---------------G-ACCCC-A-T-G-AA-G-TC-GGAGT-CG-C-TA
--G-TA-AT-C-G-C----AGA-TC-A-G-CA------TT--GCT-GC-G
-GT-G-AAT-ACGT-T-CCCGGGCC-TTGTA----CACACCG-CCC-GTC
-----A---CG--TCA-CG-AA-A--G---TCG-G-T-AAC-ACC--C-G
AA------G--C-CGG-TG-G-C-C-C-AA-C-C-C--------------
---------------------------------------------C-TT-
GT------------------------------------------------
--------------------------------------------------
G--GG-A--GG-G--A---GC-TGT--CG--AAG-G----T-GGG-AC-T
GG------------------------CG--ATT-GGGA-CG-AAG-TCGT
AACAA-GGTAG-CCGT-ACCGGAA-GGTG-CGGC-TGGATCACCTCCTTT
CTAAGGAGCACATAGCCGACTGCAG.........................
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prokMSA_id: 57773 prokMSAname: Streptomyces coelicolor str. A3(2)

prokMSA_id: 57773
prokMSAname: Streptomyces coelicolor str. A3(2)