R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 299 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|11270326|pir||T50837 cyclophilin CYP5 [imported] - Arabidopsis thaliana
>gi|2443755|gb|AAB71401.1| (AF020433) cyclophilin [Arabidopsis
thaliana]
Length = 201
Frame 3 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | || 201
0 50 100 150 200
Plus Strand HSPs:
Score = 760 (267.5 bits), Expect = 2.2e-74, P = 2.2e-74
Identities = 141/159 (88%), Positives = 150/159 (94%), Frame = +3
Query: 15 KEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGGDL 194
K AGR+V+GL+GKAVPKTAENFRALCTGEKG GKSGKPLHYKGS FHRIIPSFM+QGGD
Sbjct: 43 KSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDF 102
Query: 195 TQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGRHV 374
T GNGMGGESIYG+KFADENFKLKHTGPG+LSMAN+G +TNGSQFFITTVTTSWLDGRHV
Sbjct: 103 THGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHV 162
Query: 375 VFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGELPL 491
VFGKV+ GMDVVYKIEAEG QSGTPKSKVVI DSGELPL
Sbjct: 163 VFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGELPL 201
>gi|7437323|pir||T02489 peptidylprolyl isomerase (EC 5.2.1.8) F23F1.12 -
Arabidopsis thaliana >gi|3420055|gb|AAC31856.1| (AC004680)
cyclophilin [Arabidopsis thaliana]
Length = 201
Frame 3 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | || 201
0 50 100 150 200
Plus Strand HSPs:
Score = 760 (267.5 bits), Expect = 2.2e-74, P = 2.2e-74
Identities = 141/159 (88%), Positives = 150/159 (94%), Frame = +3
Query: 15 KEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGGDL 194
K AGR+V+GL+GKAVPKTAENFRALCTGEKG GKSGKPLHYKGS FHRIIPSFM+QGGD
Sbjct: 43 KSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDF 102
Query: 195 TQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGRHV 374
T GNGMGGESIYG+KFADENFKLKHTGPG+LSMAN+G +TNGSQFFITTVTTSWLDGRHV
Sbjct: 103 THGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHV 162
Query: 375 VFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGELPL 491
VFGKV+ GMDVVYKIEAEG QSGTPKSKVVI DSGELPL
Sbjct: 163 VFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGELPL 201
>gi|11270328|pir||T50838 cyclophilin ROC7 [imported] - Arabidopsis thaliana
>gi|6180043|gb|AAF05760.1|AF192490_1 (AF192490) cyclophilin
[Arabidopsis thaliana] >gi|8843791|dbj|BAA97339.1| (AB020755)
cyclophilin [Arabidopsis thaliana]
Length = 204
Frame 3 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | | | 204
0 50 100 150 200
Plus Strand HSPs:
Score = 760 (267.5 bits), Expect = 2.2e-74, P = 2.2e-74
Identities = 143/159 (89%), Positives = 149/159 (93%), Frame = +3
Query: 15 KEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGGDL 194
K AGRIVMGL+GK VPKT ENFRALCTGEKG GK+GK LHYKGSSFHRIIPSFMLQGGD
Sbjct: 46 KAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDF 105
Query: 195 TQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGRHV 374
T GNGMGGESIYGEKFADENFKLKHTGPG LSMANAG +TNGSQFFITTVTTSWLDGRHV
Sbjct: 106 THGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHV 165
Query: 375 VFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGELPL 491
VFGKV++GMDVVYK+EAEG QSGTPKSKVVIVDSGELPL
Sbjct: 166 VFGKVVTGMDVVYKVEAEGNQSGTPKSKVVIVDSGELPL 204
>gi|863016|gb|AAC47125.1| (U27559) cyclophilin [Caenorhabditis elegans]
Length = 171
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 654 (230.2 bits), Expect = 3.7e-63, P = 3.7e-63
Identities = 120/160 (75%), Positives = 136/160 (85%), Frame = +3
Query: 6 AGAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQG 185
AG K GRIVM LY VPKTAENFRALCTGEKG GKSGKPLH+KGS FHRIIP FM+QG
Sbjct: 13 AG-KPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQG 71
Query: 186 GDLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDG 365
GD T+GNG GGESIYGEKF DENFK KHTGPG+LSMANAGPNTNGSQFF+ TV T+WLDG
Sbjct: 72 GDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDG 131
Query: 366 RHVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
+HVVFG+V+ G+D+V K+E G+ SGTPKS+ +I D G+L
Sbjct: 132 KHVVFGRVVEGLDIVSKVEGNGSSSGTPKSECLIADCGQL 171
>gi|10720390|sp|P52015|CYP7_CAEEL PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 7
(PPIASE) (ROTAMASE) (CYCLOPHILIN-7) >gi|7510460|pir||T27371
peptidylprolyl isomerase (EC 5.2.1.8) Y75B12B.2 [similarity] -
Caenorhabditis elegans >gi|3881310|emb|CAA21760.1| (AL032663)
predicted using Genefinder~contains similarity to Pfam domain:
PF00160 (Cyclophilin type peptidyl-prolyl cis-trans isomerase),
Score=376.1, E-value=1.1e-109, N=1~cDNA EST yk106a10.3 comes from
this gene; cDNA EST yk96h11.3 comes from this ge>
Length = 171
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 654 (230.2 bits), Expect = 3.7e-63, P = 3.7e-63
Identities = 120/160 (75%), Positives = 136/160 (85%), Frame = +3
Query: 6 AGAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQG 185
AG K GRIVM LY VPKTAENFRALCTGEKG GKSGKPLH+KGS FHRIIP FM+QG
Sbjct: 13 AG-KPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQG 71
Query: 186 GDLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDG 365
GD T+GNG GGESIYGEKF DENFK KHTGPG+LSMANAGPNTNGSQFF+ TV T+WLDG
Sbjct: 72 GDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDG 131
Query: 366 RHVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
+HVVFG+V+ G+D+V K+E G+ SGTPKS+ +I D G+L
Sbjct: 132 KHVVFGRVVEGLDIVSKVEGNGSSSGTPKSECLIADCGQL 171
>gi|5731960|gb|AAD48893.1|AF053068_1 (AF053068) cyclophilin B [Dictyostelium
discoideum] >gi|5731994|gb|AAD48910.1|AF123597_1 (AF123597)
cyclophilin B [Dictyostelium discoideum]
Length = 197
Frame 3 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | | 197
0 50 100 150
Plus Strand HSPs:
Score = 641 (225.6 bits), Expect = 8.9e-62, P = 8.9e-62
Identities = 119/157 (75%), Positives = 133/157 (84%), Frame = +3
Query: 15 KEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGGDL 194
K AGRIV GLYGK VPKT ENFRALCTGEKG G SGKPLHYK S FHRIIP+FM+QGGD
Sbjct: 41 KPAGRIVFGLYGKTVPKTVENFRALCTGEKGLGTSGKPLHYKDSKFHRIIPNFMIQGGDF 100
Query: 195 TQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGRHV 374
T+G+G GGESIYG+KF DENFK+KH+ PGLLSMANAGPNTNGSQFFITTV TSWLDGRH
Sbjct: 101 TRGDGTGGESIYGKKFNDENFKIKHSKPGLLSMANAGPNTNGSQFFITTVVTSWLDGRHT 160
Query: 375 VFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
VFG+V+ GMD+V +E+ G+QSGTP I +SGEL
Sbjct: 161 VFGEVIEGMDIVKLLESIGSQSGTPSKIAKISNSGEL 197
>gi|1480465|gb|AAC47233.1| (U47812) cyclophilin Ovcyp-2 [Onchocerca volvulus]
Length = 171
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 640 (225.3 bits), Expect = 1.1e-61, P = 1.1e-61
Identities = 117/159 (73%), Positives = 134/159 (84%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G +++GRIVM L+ VPKTAENFRALCTGEKG GKSGKPLHYKGS FHR+IP+FM QGG
Sbjct: 13 GGQQSGRIVMELFNDIVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRVIPNFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T+GNG GGESIYGEKF DENFK KHTGPG+LSMANAGP+TNGSQFF+ TV T WLDG+
Sbjct: 73 DFTRGNGTGGESIYGEKFEDENFKEKHTGPGVLSMANAGPDTNGSQFFLCTVKTDWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ GMDVV KIEA G+QSG VV+ + G+L
Sbjct: 133 HVVFGRVVDGMDVVQKIEAVGSQSGKTSKDVVVANCGQL 171
>gi|1706248|sp|P52011|CYP3_CAEEL PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 (PPIASE)
(ROTAMASE) (CYCLOPHILIN-3) >gi|7510463|pir||T27373 peptidylprolyl
isomerase (EC 5.2.1.8) Y75B12B.5 [similarity] - Caenorhabditis
elegans >gi|9257006|pdb|1DYW|A Chain A, Biochemical And Structural
Characterization Of A Divergent Loop Cyclophilin From
Caenorhabditis Elegans >gi|11514370|pdb|1E3B|A Chain A, Cyclophilin
3 From C.Elegans Complexed With Aup(Et)3 >gi|1109668|gb|AAC47129.1|
(U31077) cyclophilin isoform 3 [Caenorhabditis elegans]
>gi|3881312|emb|CAA21762.1| (AL032663) predicted using
Genefinder~contains similarity to Pfam domain: PF00160 (Cyclophilin
type peptidyl-prolyl cis-trans isomerase), Score=391.4,
E-value=2.8e-114, N=1~cDNA EST CEMSB85F comes from this gene; cDNA
EST CEMSB85FB comes from this gene>
Length = 173
Frame 3 hits (HSPs): _______________________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 173
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 18..44
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 55..94
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 102..146
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 1..170
PFAM pro_isomerase: Cyclophilin type peptidyl 5..172
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 24..39
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 60..72
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 103..118
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 118..130
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 131..146
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 22..62
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 64..166
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 42..49
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 629 (221.4 bits), Expect = 1.7e-60, P = 1.7e-60
Identities = 115/159 (72%), Positives = 131/159 (82%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G K +GRIVM LY VPKTA NFRALCTGE G GKSGKPLH+KGS FHRIIP+FM+QGG
Sbjct: 13 GGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T+GNG GGESIYGEKF DENFK KHTGPG+LSMANAGPNTNGSQFF+ TV T WLDG+
Sbjct: 73 DFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ G+DVV +E+ G+QSG P +I D G+L
Sbjct: 133 HVVFGRVVEGLDVVKAVESNGSQSGKPVKDCMIADCGQL 171
>gi|7511185|pir||T27882 peptidylprolyl isomerase (EC 5.2.1.8) ZK520.5
[similarity] - Caenorhabditis elegans >gi|3881755|emb|CAB07303.1|
(Z92822) contains similarity to Pfam domain: PF00160 (Cyclophilin
type peptidyl-prolyl cis-trans isomerase), Score=379.0,
E-value=1.6e-110, N=1~cDNA EST yk123d9.3 comes from this gene; cDNA
EST yk123d9.5 comes from this gene~cDNA EST yk145f4.5 comes fr>
Length = 172
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
Plus Strand HSPs:
Score = 627 (220.7 bits), Expect = 2.7e-60, P = 2.7e-60
Identities = 115/159 (72%), Positives = 131/159 (82%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G K+ GRIVM LY VPKTAENFRALCTGEKG GKSGK LH+KGS FHRIIP FM+QGG
Sbjct: 13 GGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIPEFMIQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T+GNG GGESI+GEKF DENFK KHTGPG+LSMAN G NTNGSQFF+ TV T+WLDG+
Sbjct: 73 DFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFGKV+ GMDVV IE++G++ G P + VI D GE+
Sbjct: 133 HVVFGKVIEGMDVVKAIESKGSEDGAPSAPCVIADCGEM 171
>gi|1084455|pir||S48017 peptidylprolyl isomerase (EC 5.2.1.8) Cyp2 - rice
>gi|600767|gb|AAA57045.1| (L29469) cyclophilin 2 [Oryza sativa]
Length = 172
Frame 3 hits (HSPs): _______________________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
__________________
Annotated Domains:
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 1..170
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 42..49
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 624 (219.7 bits), Expect = 5.6e-60, P = 5.6e-60
Identities = 117/159 (73%), Positives = 129/159 (81%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G AGRIVM LY K VP+TAENFRALCTGEKG GKSGKPLHYKGS+FHR+IP FM QGG
Sbjct: 13 GGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T+GNG GGESIYGEKFADE FK KH PG+LSMANAGPNTNGSQFFI TV SWLDG+
Sbjct: 73 DFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGPNTNGSQFFICTVPCSWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ GMDVV IE G++ G+ VVI D G+L
Sbjct: 133 HVVFGRVVEGMDVVKAIEKVGSRGGSTAKPVVIADCGQL 171
>gi|11270316|pir||T50768 cyclophylin [imported] - Digitalis lanata
>gi|1563719|emb|CAA69622.1| (Y08320) cyclophylin [Digitalis lanata]
Length = 172
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
Plus Strand HSPs:
Score = 619 (217.9 bits), Expect = 1.9e-59, P = 1.9e-59
Identities = 116/159 (72%), Positives = 127/159 (79%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G + GRIVM LY VPKTAENFRALCTGEKG GK+GKPLHYKGS+FHR+IP FM QGG
Sbjct: 13 GGQPCGRIVMELYADVVPKTAENFRALCTGEKGVGKTGKPLHYKGSAFHRVIPGFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T GNG GGESIYG KFADENF KHTGPG+LSMANAGP TNGSQFFI T TSWLDG+
Sbjct: 73 DFTAGNGTGGESIYGAKFADENFVKKHTGPGILSMANAGPGTNGSQFFICTEKTSWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ GMDVV IE G+QSG VVI D G++
Sbjct: 133 HVVFGQVVEGMDVVRAIEKVGSQSGKTAKPVVIADCGQI 171
>gi|600769|gb|AAA57046.1| (L29470) cyclophilin 2 [Oryza sativa]
Length = 172
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
Plus Strand HSPs:
Score = 618 (217.5 bits), Expect = 2.4e-59, P = 2.4e-59
Identities = 116/159 (72%), Positives = 128/159 (80%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G AGRIVM LY K VP+TAENFRALCTGEKG GKSGKPLHYKGS+FHR+IP FM QGG
Sbjct: 13 GGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T+GNG GGESIYGEKFADE FK KH PG+LS ANAGPNTNGSQFFI TV SWLDG+
Sbjct: 73 DFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSTANAGPNTNGSQFFICTVPCSWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ GMDVV IE G++ G+ VVI D G+L
Sbjct: 133 HVVFGRVVEGMDVVKAIEKVGSRGGSTAKPVVIADCGQL 171
>gi|11270318|pir||T50769 cyclophilin [imported] - Digitalis lanata
>gi|1561575|emb|CAA69598.1| (Y08273) cyclophilin [Digitalis lanata]
Length = 172
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
Plus Strand HSPs:
Score = 617 (217.2 bits), Expect = 3.1e-59, P = 3.1e-59
Identities = 115/159 (72%), Positives = 127/159 (79%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G + GRIVM LY VPKTA+NFRALCTGEKG GKSGKPLHYKGS+FHR+IP FM QGG
Sbjct: 13 GGQPCGRIVMELYADVVPKTADNFRALCTGEKGVGKSGKPLHYKGSAFHRVIPGFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T GNG GGESIYG KFADENF KHTGPG+LSMANAGP TNGSQFFI T T+WLDG+
Sbjct: 73 DFTAGNGTGGESIYGAKFADENFVKKHTGPGILSMANAGPGTNGSQFFICTEKTAWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ GMDVV IE G+QSG VV+ D G+L
Sbjct: 133 HVVFGQVVEGMDVVRAIEKVGSQSGKTAKPVVVADCGQL 171
>gi|1480463|gb|AAC47232.1| (U47813) cyclophilin Dicyp-2 [Dirofilaria immitis]
Length = 171
Frame 3 hits (HSPs): ______________________________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 615 (216.5 bits), Expect = 5.1e-59, P = 5.1e-59
Identities = 113/155 (72%), Positives = 130/155 (83%), Frame = +3
Query: 21 AGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGGDLTQ 200
AGRIVM L+ VPKTAENFR LCTGE+G G+SGK LHYKGS FHR+IP+FMLQGGD T+
Sbjct: 17 AGRIVMELFADIVPKTAENFRCLCTGERGVGRSGKKLHYKGSKFHRVIPNFMLQGGDFTR 76
Query: 201 GNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGRHVVF 380
GNG GGESIYGEKF DENF+ KHTGPG+LSMANAGPNTNGSQFFI T T WLDG+HVVF
Sbjct: 77 GNGTGGESIYGEKFPDENFQEKHTGPGVLSMANAGPNTNGSQFFICTAKTEWLDGKHVVF 136
Query: 381 GKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
G+V+ GM+VV IE++G+QSG + VVI D G+L
Sbjct: 137 GRVVEGMNVVKAIESKGSQSGRTSADVVITDCGQL 171
>gi|4803930|gb|AAD29803.1|AC006264_11 (AC006264) cyclophilin (CYP2)
[Arabidopsis thaliana]
Length = 174
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 174
0 50 100 150
Plus Strand HSPs:
Score = 613 (215.8 bits), Expect = 8.3e-59, P = 8.3e-59
Identities = 114/159 (71%), Positives = 128/159 (80%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G AG+IVM LY PKTAENFRALCTGEKG G+SGKPLH+KGSSFHR+IP+FM QGG
Sbjct: 14 GGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGG 73
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T+GNG GGESIYG KF DENF+ KHTGPG+LSMANAG NTNGSQFFI TV T WLDG+
Sbjct: 74 DFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGK 133
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ G+DVV IE G+ SG P VVI D GE+
Sbjct: 134 HVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEI 172
>gi|1084454|pir||S48018 peptidylprolyl isomerase (EC 5.2.1.8) Cyp1 - rice
>gi|600765|gb|AAA57044.1| (L29471) cyclophilin 1 [Oryza sativa]
Length = 179
Frame 3 hits (HSPs): ______________________________________________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | 179
0 50 100 150
__________________
Annotated Domains:
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 3..172
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 57..74
__________________
Plus Strand HSPs:
Score = 612 (215.4 bits), Expect = 1.1e-58, P = 1.1e-58
Identities = 113/159 (71%), Positives = 130/159 (81%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G AGR+VM L+ VPKTAENFR LCTGEKG G SGKPLHYKGS+FHRIIP+FM QGG
Sbjct: 15 GKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRIIPNFMCQGG 74
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T+GNG GGESIYG++FADENFKL+HTGPG+LSMANAGPNTNGSQFFI T T+WLDG+
Sbjct: 75 DFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGPNTNGSQFFICTTRTTWLDGK 134
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFGKV+ G VV K+E G+ SG +V+I D G+L
Sbjct: 135 HVVFGKVVDGYTVVEKMEQVGSGSGGTAERVLIEDCGQL 173
>gi|11270324|pir||T50772 cyclophilin [imported] - Arabidopsis thaliana
>gi|2443757|gb|AAB71402.1| (AF020434) cyclophilin [Arabidopsis
thaliana]
Length = 174
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 174
0 50 100 150
Plus Strand HSPs:
Score = 612 (215.4 bits), Expect = 1.1e-58, P = 1.1e-58
Identities = 113/159 (71%), Positives = 128/159 (80%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G AG+IVM LY PKTAENFRALCTGEKG G+SGKPLH+KGSSFHR+IP+FM QGG
Sbjct: 14 GGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGG 73
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T+GNG GGESIYG KF DENF+ KHTGPG+LSMANAG NTNGSQFFI TV T WLDG+
Sbjct: 74 DFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGK 133
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ G+DVV IE G+ SG P VV+ D GE+
Sbjct: 134 HVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVVADCGEI 172
>gi|3334157|sp|Q39613|CYPH_CATRO PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PPIASE)
(ROTAMASE) (CYCLOPHILIN) (CYCLOSPORIN A-BINDING PROTEIN)
>gi|7437317|pir||T10056 peptidylprolyl isomerase (EC 5.2.1.8)
(cyclophilin 1), cytosolic - Madagascar periwinkle
>gi|1220142|emb|CAA59468.1| (X85185) cyclophilin [Catharanthus
roseus]
Length = 172
Frame 3 hits (HSPs): _______________________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 18..44
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 55..94
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 102..146
PFAM pro_isomerase: Cyclophilin type peptidyl 5..172
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 24..39
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 60..72
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 103..118
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 118..130
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 131..146
PRODOM PD071476: CYPH_CATRO 1..20
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 22..62
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 64..166
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 611 (215.1 bits), Expect = 1.3e-58, P = 1.3e-58
Identities = 114/159 (71%), Positives = 126/159 (79%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G + AGRIVM L+ P+TAENFRALCTGEKG G+SGKPLHYK SSFHR+IP FM QGG
Sbjct: 13 GGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T GNG GGESIYG KFADENF KHTGPG+LSMANAGPNTNGSQFFI T T WLDG+
Sbjct: 73 DFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ GMDVV IE G+ SG KVV+ D G+L
Sbjct: 133 HVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQL 171
>gi|7437318|pir||T07950 peptidylprolyl isomerase (EC 5.2.1.8) 1 - Chlamydomonas
reinhardtii >gi|2959712|gb|AAC05639.1| (AF052206) cyclophilin 1
[Chlamydomonas reinhardtii]
Length = 172
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
Plus Strand HSPs:
Score = 609 (214.4 bits), Expect = 2.2e-58, P = 2.2e-58
Identities = 112/160 (70%), Positives = 128/160 (80%), Frame = +3
Query: 6 AGAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQG 185
A GRI M LY VPKTAENFRALCTGEKG G+SGKPLH+KGS+FHR+IP+FM QG
Sbjct: 12 ADGAPVGRIEMELYADDVPKTAENFRALCTGEKGVGRSGKPLHFKGSTFHRVIPNFMCQG 71
Query: 186 GDLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDG 365
GD T+GNG GGESIYGEKF DENFK +HTGPG+LSMANAGPNTNGSQFF+ TV T+WLDG
Sbjct: 72 GDFTRGNGTGGESIYGEKFPDENFKHRHTGPGVLSMANAGPNTNGSQFFLCTVETAWLDG 131
Query: 366 RHVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
+HVVFGKV GMDVV K+E G+ SG ++ I D +L
Sbjct: 132 KHVVFGKVCKGMDVVKKVEGYGSSSGKTRATFAIADCAQL 171
>gi|1706247|sp|P52010|CYP2_CAEEL PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 2 (PPIASE)
(ROTAMASE) (CYCLOPHILIN-2) >gi|1109674|gb|AAC47127.1| (U34354)
cyclophilin isoform 2 (cyp-2) [Caenorhabditis elegans]
Length = 171
Frame 3 hits (HSPs): _______________________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 18..44
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 55..94
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 101..145
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 1..169
PFAM pro_isomerase: Cyclophilin type peptidyl 5..171
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 24..39
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 60..72
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 102..117
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 117..129
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 130..145
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 22..62
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 64..165
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 42..49
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 608 (214.0 bits), Expect = 2.8e-58, P = 2.8e-58
Identities = 113/159 (71%), Positives = 129/159 (81%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G K+ GRIVM LY PKTAENFRALCTGEKG GKSGK LH+KGS FHRIIP FM+QGG
Sbjct: 13 GGKKGGRIVMELYNDIAPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIPEFMIQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T+GNG G ESI+GEKF DENFK KHTGPG+LSMAN G NTNGSQFF+ TV T+WLDG+
Sbjct: 73 DFTEGNGTG-ESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGK 131
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFGKV+ GMDVV IE++G++ G P + VI D GE+
Sbjct: 132 HVVFGKVIEGMDVVKAIESKGSEDGAPSAPCVIADCGEM 170
>gi|7437314|pir||S74880 peptidylprolyl isomerase (EC 5.2.1.8) - Synechocystis
sp. (strain PCC 6803) >gi|1652923|dbj|BAA17841.1| (D90909)
peptidyl-prolyl cis-trans isomerase [Synechocystis sp.]
Length = 171
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 606 (213.3 bits), Expect = 4.6e-58, P = 4.6e-58
Identities = 110/159 (69%), Positives = 131/159 (82%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G+ AGRIVM L+ + PKTAENFRALCTGEKG GK+GKPLH+KGS FHR+I FM QGG
Sbjct: 12 GSDTAGRIVMELFDEVTPKTAENFRALCTGEKGVGKAGKPLHFKGSHFHRVITDFMAQGG 71
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T+GNG GGESIYGEKFADENF+LKH PGLLSMANAGPNTNGSQFF+T V WLDG+
Sbjct: 72 DFTRGNGTGGESIYGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFLTFVPCPWLDGK 131
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ G++++ ++EA G+QSG K +VI D GE+
Sbjct: 132 HVVFGEVVEGLEILEQLEANGSQSGQTKQAIVISDCGEI 170
>gi|68407|pir||CSRP peptidylprolyl isomerase (EC 5.2.1.8) - rape
Length = 171
Frame 3 hits (HSPs): _______________________________________________
Annotated Domains: __________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
__________________
Annotated Domains:
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 42..49
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 605 (213.0 bits), Expect = 5.8e-58, P = 5.8e-58
Identities = 115/159 (72%), Positives = 125/159 (78%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G K AGRIVM LY VP+TAENFRALCTGE+G GKSGKPLHYKGS+FHR+IP FM QGG
Sbjct: 13 GDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T GNG GGESIYG KF DENF KHTGPG+LSM NAG NTNGSQFFI T TSWLDG+
Sbjct: 73 DFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ GMDVV IE G+ SG KVV D G+L
Sbjct: 133 HVVFGQVVEGMDVVRDIEKVGSDSGRTSKKVVTCDCGQL 171
>gi|167138|gb|AAA62706.1| (M55018) cyclophilin [Brassica napus]
Length = 168
Frame 3 hits (HSPs): ________________________________________________
__________________________________________________
Database sequence: | | | | | 168
0 50 100 150
Plus Strand HSPs:
Score = 605 (213.0 bits), Expect = 5.8e-58, P = 5.8e-58
Identities = 115/159 (72%), Positives = 125/159 (78%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G K AGRIVM LY VP+TAENFRALCTGE+G GKSGKPLHYKGS+FHR+IP FM QGG
Sbjct: 10 GDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGG 69
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T GNG GGESIYG KF DENF KHTGPG+LSM NAG NTNGSQFFI T TSWLDG+
Sbjct: 70 DFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGK 129
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ GMDVV IE G+ SG KVV D G+L
Sbjct: 130 HVVFGQVVEGMDVVRDIEKVGSDSGRTSKKVVTCDCGQL 168
>gi|1345921|sp|P24525|CYPH_BRANA PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PPIASE)
(ROTAMASE) (CYCLOPHILIN) (CYCLOSPORIN A-BINDING PROTEIN)
Length = 171
Frame 3 hits (HSPs): _______________________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 18..44
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 55..94
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 102..146
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 1..170
PFAM pro_isomerase: Cyclophilin type peptidyl 5..171
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 24..39
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 60..72
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 103..118
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 118..130
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 131..146
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 22..62
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 64..163
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 42..49
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 605 (213.0 bits), Expect = 5.8e-58, P = 5.8e-58
Identities = 115/159 (72%), Positives = 125/159 (78%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G K AGRIVM LY VP+TAENFRALCTGE+G GKSGKPLHYKGS+FHR+IP FM QGG
Sbjct: 13 GDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T GNG GGESIYG KF DENF KHTGPG+LSM NAG NTNGSQFFI T TSWLDG+
Sbjct: 73 DFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ GMDVV IE G+ SG KVV D G+L
Sbjct: 133 HVVFGQVVEGMDVVRDIEKVGSDSGRTSKKVVTCDCGQL 171
>gi|68406|pir||CSTO peptidylprolyl isomerase (EC 5.2.1.8) - tomato
Length = 171
Frame 3 hits (HSPs): _______________________________________________
Annotated Domains: ______
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
__________________
Annotated Domains:
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 602 (211.9 bits), Expect = 1.2e-57, P = 1.2e-57
Identities = 112/159 (70%), Positives = 123/159 (77%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G AGR+VM LY PKTAENFRALCTGEKG GK GKPLHYKGS+FHR+IP FM QGG
Sbjct: 13 GGAPAGRVVMELYADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T GNG GGESIYG KF DENF KHTGPG+LSMANAGP TNGSQFFI T T WL+G+
Sbjct: 73 DFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ GMDV+ K EA G+ SG VVI D G+L
Sbjct: 133 HVVFGQVVEGMDVIKKAEAVGSSSGRCSKPVVIADCGQL 171
>gi|118104|sp|P21569|CYPH_MAIZE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PPIASE)
(ROTAMASE) (CYCLOPHILIN) (CYCLOSPORIN A-BINDING PROTEIN)
>gi|68408|pir||CSZM peptidylprolyl isomerase (EC 5.2.1.8) - maize
>gi|168461|gb|AAA63403.1| (M55021) cyclophilin [Zea mays]
>gi|829148|emb|CAA48638.1| (X68678) cyclophilin [Zea mays]
Length = 172
Frame 3 hits (HSPs): _______________________________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 18..44
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 55..94
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 102..146
PFAM pro_isomerase: Cyclophilin type peptidyl 5..172
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 24..39
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 60..72
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 103..118
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 118..130
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 131..146
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 22..62
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 64..166
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 42..49
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 602 (211.9 bits), Expect = 1.2e-57, P = 1.2e-57
Identities = 113/159 (71%), Positives = 125/159 (78%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G AGRIVM LY VPKTAENFRALCTGEKG GKSGKPLHYKGS+FHR+IP FM QGG
Sbjct: 13 GGAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T+GNG GGESIYGEKF DE F K PG+LSMANAGPNTNGSQFFI TV T WLDG+
Sbjct: 73 DFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ GMDVV IE GT++G+ V + D G+L
Sbjct: 133 HVVFGQVVEGMDVVKAIEKVGTRNGSTSKVVKVADCGQL 171
>gi|2129568|pir||S71220 peptidylprolyl isomerase (EC 5.2.1.8) ROC2 -
Arabidopsis thaliana >gi|1305457|gb|AAB96833.1| (U40400) cytosolic
cyclophilin [Arabidopsis thaliana]
Length = 176
Frame 3 hits (HSPs): ______________________________________________
Annotated Domains: ______
__________________________________________________
Database sequence: | | | | | 176
0 50 100 150
__________________
Annotated Domains:
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 601 (211.6 bits), Expect = 1.5e-57, P = 1.5e-57
Identities = 111/159 (69%), Positives = 126/159 (79%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G +AGR+VM L+ P+TA NFRALCTGE G GK+GK LHYKGS+FHRIIP FM QGG
Sbjct: 13 GKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T+GNG GGESIYG KF DENFKLKHTGPG+LSMAN+GPNTNGSQFFI T TSWLDG+
Sbjct: 73 DFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFGKV+ G +VV +E G+ G P +VVI D GEL
Sbjct: 133 HVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171
>gi|11270362|pir||T47724 peptidylprolyl isomerase (EC 5.2.1.8) ROC2 -
Arabidopsis thaliana >gi|7572905|emb|CAB87406.1| (AL163763)
peptidylprolyl isomerase [Arabidopsis thaliana]
Length = 176
Frame 3 hits (HSPs): ______________________________________________
__________________________________________________
Database sequence: | | | | | 176
0 50 100 150
Plus Strand HSPs:
Score = 601 (211.6 bits), Expect = 1.5e-57, P = 1.5e-57
Identities = 111/159 (69%), Positives = 126/159 (79%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G +AGR+VM L+ P+TA NFRALCTGE G GK+GK LHYKGS+FHRIIP FM QGG
Sbjct: 13 GKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T+GNG GGESIYG KF DENFKLKHTGPG+LSMAN+GPNTNGSQFFI T TSWLDG+
Sbjct: 73 DFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFGKV+ G +VV +E G+ G P +VVI D GEL
Sbjct: 133 HVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171
>gi|227879|prf||1713247A cyclophilin [Dictyostelium discoideum]
Length = 179
Frame 3 hits (HSPs): _____________________________________________
__________________________________________________
Database sequence: | | | | | 179
0 50 100 150
Plus Strand HSPs:
Score = 600 (211.2 bits), Expect = 2.0e-57, P = 2.0e-57
Identities = 115/159 (72%), Positives = 124/159 (77%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G EAG++VM LY VPKTAENFRALCTGEKG GKSGKPL YKGSSFHR+I +FM QGG
Sbjct: 21 GGVEAGKVVMELYANTVPKTAENFRALCTGEKGIGKSGKPLSYKGSSFHRVITNFMCQGG 80
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T GNG GGESIYG KFADENFKLKH G G LSMANAG NTNGSQFFI T WLDG+
Sbjct: 81 DFTMGNGTGGESIYGNKFADENFKLKHFGQGTLSMANAGANTNGSQFFICVAPTDWLDGK 140
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG V GMDVV K+EA G+QSG VVI + G+L
Sbjct: 141 HVVFGFVTEGMDVVKKMEAAGSQSGKTTKPVVIANCGQL 179
>gi|11270314|pir||T50767 cyclophilin [imported] - Arabidopsis thaliana
>gi|939726|gb|AAA74096.1| (U31370) cyclophilin [Arabidopsis
thaliana]
Length = 176
Frame 3 hits (HSPs): ______________________________________________
__________________________________________________
Database sequence: | | | | | 176
0 50 100 150
Plus Strand HSPs:
Score = 600 (211.2 bits), Expect = 2.0e-57, P = 2.0e-57
Identities = 111/159 (69%), Positives = 126/159 (79%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G +AGR+VM L+ P+TA NFRALCTGE G GK+GK LHYKGS+FHRIIP FM QGG
Sbjct: 13 GKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T+GNG GGESIYG KF DENFKLKHTGPG+LSMAN+GPNTNGSQFFI T TSWLDG+
Sbjct: 73 DFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFGKV+ G +VV +E G+ G P +VVI D GEL
Sbjct: 133 HVVFGKVVDGYNVVKAMEDVGSYMGNPSERVVIEDCGEL 171
>gi|2129569|pir||S71219 peptidylprolyl isomerase (EC 5.2.1.8) ROC3 -
Arabidopsis thaliana >gi|1305455|gb|AAB96832.1| (U40399) cytosolic
cyclophilin [Arabidopsis thaliana]
>gi|4581104|gb|AAD24594.1|AC005825_1 (AC005825) cytosolic
cyclophilin (ROC3) [Arabidopsis thaliana]
Length = 173
Frame 3 hits (HSPs): _______________________________________________
Annotated Domains: ______
__________________________________________________
Database sequence: | | | | | 173
0 50 100 150
__________________
Annotated Domains:
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 56..73
__________________
Plus Strand HSPs:
Score = 599 (210.9 bits), Expect = 2.5e-57, P = 2.5e-57
Identities = 112/159 (70%), Positives = 124/159 (77%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G K AGRIVM LY P+TAENFRALCTGE+G GK GKPLHYKGSSFHR+IP FM QGG
Sbjct: 14 GGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGG 73
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T GNG GGESIYG KF DENF KHTGPG+LSMANAG NTNGSQFFI T TSWLDG+
Sbjct: 74 DFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGK 133
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ G++VV IE G+ SG VVI D G++
Sbjct: 134 HVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQI 172
>gi|118103|sp|P21568|CYPH_LYCES PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PPIASE)
(ROTAMASE) (CYCLOPHILIN) (CYCLOSPORIN A-BINDING PROTEIN)
>gi|170440|gb|AAA63543.1| (M55019) cyclophilin [Lycopersicon
esculentum]
Length = 171
Frame 3 hits (HSPs): _______________________________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 18..44
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 55..94
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 102..146
PFAM pro_isomerase: Cyclophilin type peptidyl 5..171
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 24..39
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 60..72
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 103..118
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 118..130
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 131..146
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 22..62
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 64..166
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 598 (210.5 bits), Expect = 3.2e-57, P = 3.2e-57
Identities = 111/159 (69%), Positives = 123/159 (77%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G AGR+VM L+ PKTAENFRALCTGEKG GK GKPLHYKGS+FHR+IP FM QGG
Sbjct: 13 GGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T GNG GGESIYG KF DENF KHTGPG+LSMANAGP TNGSQFFI T T WL+G+
Sbjct: 73 DFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ GMDV+ K EA G+ SG VVI D G+L
Sbjct: 133 HVVFGQVVEGMDVIKKAEAVGSSSGRCSKPVVIADCGQL 171
>gi|7649161|gb|AAF65770.1|AF242312_1 (AF242312) cyclophilin [Euphorbia esula]
Length = 160
Frame 3 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | | | | 160
0 50 100 150
Plus Strand HSPs:
Score = 597 (210.2 bits), Expect = 4.1e-57, P = 4.1e-57
Identities = 112/159 (70%), Positives = 122/159 (76%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G GRIVM LY P+TAENFRALCTGEKG G+S KPLH+KGSSFHR+IP FM QGG
Sbjct: 1 GGAPVGRIVMELYADTTPRTAENFRALCTGEKGVGRSRKPLHFKGSSFHRVIPGFMCQGG 60
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T GNG GGESIYG KFADENF KHTGPG+LSMANAGP TNGSQFFI T T WLDG+
Sbjct: 61 DFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLDGK 120
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFGKV+ GMDVV IE G+ SG VV+ D G+L
Sbjct: 121 HVVFGKVVEGMDVVKAIEKVGSSSGRTSKPVVVSDCGQL 159
>gi|461903|sp|P34790|CYP1_ARATH PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PPIASE)
(ROTAMASE) (CYCLOPHILIN) (CYCLOSPORIN A-BINDING PROTEIN)
>gi|7437320|pir||T06073 peptidylprolyl isomerase (EC 5.2.1.8) ROC1
- Arabidopsis thaliana >gi|405129|gb|AAA20047.1| (L14844)
cyclophilin [Arabidopsis thaliana] >gi|4490326|emb|CAB38608.1|
(AL035656) peptidylprolyl isomerase ROC1 [Arabidopsis thaliana]
>gi|7270856|emb|CAB80537.1| (AL161593) peptidylprolyl isomerase
ROC1 [Arabidopsis thaliana]
Length = 172
Frame 3 hits (HSPs): ______________________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 18..44
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 55..94
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 102..146
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 1..170
PFAM pro_isomerase: Cyclophilin type peptidyl 5..172
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 24..39
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 60..72
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 103..118
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 118..130
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 131..146
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 22..62
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 64..166
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 596 (209.8 bits), Expect = 5.2e-57, P = 5.2e-57
Identities = 110/155 (70%), Positives = 124/155 (80%), Frame = +3
Query: 21 AGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGGDLTQ 200
AGRIVM LY P+TAENFRALCTGEKG G +GKPLH+KGS FHR+IP+FM QGGD T
Sbjct: 17 AGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTA 76
Query: 201 GNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGRHVVF 380
GNG GGESIYG KF DENF+ KHTGPG+LSMANAG NTNGSQFFI TV T WLDG+HVVF
Sbjct: 77 GNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVF 136
Query: 381 GKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
G+V+ G+DVV IE G+ SG P VV+ D G+L
Sbjct: 137 GQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQL 171
>gi|1706246|sp|P52009|CYP1_CAEEL PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 (PPIASE)
(ROTAMASE) (CYCLOPHILIN-1) >gi|7510030|pir||T27034 peptidylprolyl
isomerase (EC 5.2.1.8) Y49A3A.5 [similarity] - Caenorhabditis
elegans >gi|1146430|gb|AAC47116.1| (U30943) cyclophilin-1
[Caenorhabditis elegans] >gi|4008437|emb|CAA22075.1| (AL033512)
predicted using Genefinder~contains similarity to Pfam domain:
PF00160 (Cyclophilin type peptidyl-prolyl cis-trans isomerase),
Score=395.9, E-value=1.3e-115, N=1~cDNA EST EMBL:T01876 comes from
this gene~cDNA EST yk100e4.5 comes from this ge>
Length = 192
Frame 3 hits (HSPs): __________________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 192
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 36..62
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 73..112
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 120..164
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 19..188
PFAM pro_isomerase: Cyclophilin type peptidyl 23..190
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 42..57
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 78..90
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 121..136
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 136..148
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 149..164
PRODOM PD071495: CYP1_CAEEL 1..38
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 40..80
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 82..184
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 73..90
__________________
Plus Strand HSPs:
Score = 593 (208.7 bits), Expect = 1.1e-56, P = 1.1e-56
Identities = 112/159 (70%), Positives = 122/159 (76%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G + AGR+ M L+ VPKTAENFRALCTGEKG G+ G LH+KGS FHRIIP FM+QGG
Sbjct: 31 GEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGG 90
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T+ NG GGESIYG KF DENF LKHTGPG LSMANAGPNTNGSQFFI TV T WLDG
Sbjct: 91 DFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGG 150
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V GM VV KIE G++SG P V I D GEL
Sbjct: 151 HVVFGQVTDGMSVVKKIEKMGSRSGAPAKTVTIADCGEL 189
>gi|11270308|pir||T49204 cyclophilin-like protein - Arabidopsis thaliana
>gi|7573487|emb|CAB87846.1| (AL163832) cyclophilin-like protein
[Arabidopsis thaliana]
Length = 234
Frame 3 hits (HSPs): ___________________________________
__________________________________________________
Database sequence: | | | | | | 234
0 50 100 150 200
Plus Strand HSPs:
Score = 593 (208.7 bits), Expect = 1.1e-56, P = 1.1e-56
Identities = 115/163 (70%), Positives = 133/163 (81%), Frame = +3
Query: 21 AGRIVMGLYGKAVPKTAE----NFRALC--TGEKGAGKSGKPLHYKGSSFHRIIPSFMLQ 182
AGRI++GL+G VPKTA +F GEKG G GKPL++KGSSFHRIIP FM+Q
Sbjct: 72 AGRILIGLFGNIVPKTAAKRLFSFDVYPPGAGEKGVGNMGKPLYFKGSSFHRIIPGFMIQ 131
Query: 183 GGDLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLD 362
GGD T+G+G GGESIYG+KFADENFKLKHTGPG LSMAN+GP++NGSQFFITTVTTSWLD
Sbjct: 132 GGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGPDSNGSQFFITTVTTSWLD 191
Query: 363 GRHVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGELPL 491
G HVVFGKVLSGM+VV KIEA+G SG PK+ V+I SGE+ L
Sbjct: 192 GHHVVFGKVLSGMEVVRKIEAQGQDSGVPKANVIIFASGEVSL 234
>gi|11270322|pir||T50771 cyclophilin [imported] - potato
>gi|4559302|gb|AAD22975.1|AF126551_1 (AF126551) cyclophilin
[Solanum tuberosum subsp. tuberosum]
Length = 171
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 592 (208.4 bits), Expect = 1.4e-56, P = 1.4e-56
Identities = 109/159 (68%), Positives = 122/159 (76%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G AGR+VM L+ PKTAENFRALCTGEKG GK GKPLHYKGS+FHR+IP FM QGG
Sbjct: 13 GGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T GNG GGESIYG KF DENF KHTG G+LSMANAGP TNGSQFFI T T WLDG+
Sbjct: 73 DFTAGNGTGGESIYGAKFKDENFVKKHTGTGILSMANAGPGTNGSQFFICTAKTEWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ G+DV+ K EA G+ SG VV+ D G+L
Sbjct: 133 HVVFGQVVEGLDVIKKAEAVGSSSGRCSKPVVVADCGQL 171
>gi|1480461|gb|AAC47231.1| (U47811) cyclophilin Bmcyp-2 [Brugia malayi]
Length = 171
Frame 3 hits (HSPs): ______________________________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 591 (208.0 bits), Expect = 1.8e-56, P = 1.8e-56
Identities = 108/155 (69%), Positives = 128/155 (82%), Frame = +3
Query: 21 AGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGGDLTQ 200
AGRIVM L+ VPKTAENFR LCTGE+G G+SGK LHYKGS FHR+IP+FMLQGGD T+
Sbjct: 17 AGRIVMELFADIVPKTAENFRCLCTGERGMGRSGKKLHYKGSKFHRVIPNFMLQGGDFTR 76
Query: 201 GNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGRHVVF 380
GNG GG+SIYGEKF DENF+ KHTG G+LSMANAGPNTNGSQFFI T T WLDG+HVVF
Sbjct: 77 GNGTGGQSIYGEKFPDENFQEKHTGLGVLSMANAGPNTNGSQFFICTAKTEWLDGKHVVF 136
Query: 381 GKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
+V+ GM+VV +E++G+QSG + +VI D G+L
Sbjct: 137 NRVVEGMNVVKAVESKGSQSGRTSADIVISDCGQL 171
>gi|1076367|pir||A53422 peptidylprolyl isomerase (EC 5.2.1.8) ROC1 -
Arabidopsis thaliana
Length = 173
Frame 3 hits (HSPs): ______________________________________________
Annotated Domains: ______
__________________________________________________
Database sequence: | | | | | 173
0 50 100 150
__________________
Annotated Domains:
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 588 (207.0 bits), Expect = 3.7e-56, P = 3.7e-56
Identities = 110/156 (70%), Positives = 125/156 (80%), Frame = +3
Query: 21 AGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGGDLTQ 200
AGRIVM LY P+TAENFRALCTGEKG G +GKPLH+KGS FHR+IP+FM QGGD T
Sbjct: 17 AGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTA 76
Query: 201 GNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGRHVVF 380
GNG GGESIYG KF DENF+ KHTGPG+LSMANAG NTNGSQFFI TV T WLDG+HVVF
Sbjct: 77 GNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVF 136
Query: 381 GKVLSGMDVVYKIEAEGTQS-GTPKSKVVIVDSGEL 485
G+V+ G+DVV IE G++S G P VV+ D G+L
Sbjct: 137 GQVVEGLDVVKAIEKVGSRSSGKPTKPVVVADCGQL 172
>gi|11270320|pir||T50770 hypothetical protein vcCyP [imported] - fava bean
>gi|3063396|dbj|BAA25755.1| (AB012947) vcCyP [Vicia faba]
Length = 171
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 588 (207.0 bits), Expect = 3.7e-56, P = 3.7e-56
Identities = 108/159 (67%), Positives = 125/159 (78%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G + AGRI+ L+ P+TAENFRALCTGEKG G+SGKPLH+KGSSFHR+IP+FM QGG
Sbjct: 13 GGQNAGRIIFELFADVTPRTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T GNG GGESIYG KFADENF KHTGPG+LSMANAGP TNGSQFFI T T WLDG+
Sbjct: 73 DFTAGNGTGGESIYGSKFADENFIKKHTGPGILSMANAGPGTNGSQFFICTAKTDWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ G++VV IE G+ SG VVI + G+L
Sbjct: 133 HVVFGQVVDGLNVVRDIEKVGSGSGKTSKPVVIANCGQL 171
>gi|1076510|pir||S54833 peptidylprolyl isomerase (EC 5.2.1.8) Cyp - kidney bean
>gi|829119|emb|CAA52414.1| (X74403) cyclophilin [Phaseolus
vulgaris]
Length = 172
Frame 3 hits (HSPs): _______________________________________________
Annotated Domains: ______
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
__________________
Annotated Domains:
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 587 (206.6 bits), Expect = 4.7e-56, P = 4.7e-56
Identities = 109/159 (68%), Positives = 123/159 (77%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G + AGRIV LY P+TAENFRALCTGEKG G+SGKP+H+KGS FHR+IP+FM QGG
Sbjct: 13 GGQPAGRIVFELYADVTPRTAENFRALCTGEKGVGRSGKPVHFKGSIFHRVIPNFMCQGG 72
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T GNG GGESIYG KFADENF KHTGPG+LSMANAGP TNGSQFFI T T WLDG+
Sbjct: 73 DFTAGNGTGGESIYGAKFADENFVKKHTGPGILSMANAGPGTNGSQFFICTTKTEWLDGK 132
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+V+ G+DVV IE G+ SG V I D G+L
Sbjct: 133 HVVFGQVVEGLDVVKDIEKVGSGSGKTARPVAIADCGQL 171
>gi|6066431|emb|CAB58298.1| (AL121851) cyclophilin [Leishmania major]
Length = 295
Frame 3 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | | | 295
0 50 100 150 200 250
Plus Strand HSPs:
Score = 585 (205.9 bits), Expect = 7.7e-56, P = 7.7e-56
Identities = 110/160 (68%), Positives = 127/160 (79%), Frame = +3
Query: 15 KEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGGDL 194
K AGRIVM LY VPKTAENFRALCTGEKG G+SGKPLHYK S FHR+IP+FM+QGGD
Sbjct: 35 KAAGRIVMELYADTVPKTAENFRALCTGEKGKGRSGKPLHYKSSVFHRVIPNFMIQGGDF 94
Query: 195 TQGNGMGGESIYGEKFADENFKLK---HTGPGLLSMANAGPNTNGSQFFITTVTTSWLDG 365
T+GNG GGESIYG F DE+F K HTG G LSMANAGPNTNGSQFFI T T WLDG
Sbjct: 95 TRGNGTGGESIYGTTFRDESFSGKAGRHTGLGCLSMANAGPNTNGSQFFICTAATPWLDG 154
Query: 366 RHVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
+HVVFG+V+ G+DVV K+E G+ SG +S++V+ D GE+
Sbjct: 155 KHVVFGRVIDGLDVVKKVERLGSSSGKTRSRIVVSDCGEV 194
>gi|630464|pir||B53522 20k cyclophilin - Toxoplasma gondii (fragment)
>gi|436959|gb|AAA17998.1| (U04634) 20 kDa cyclophilin precursor
[Toxoplasma gondii]
Length = 347
Frame 3 hits (HSPs): _______________________
Annotated Domains: ____
__________________________________________________
Database sequence: | | | | 347
0 150 300
__________________
Annotated Domains:
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 230..247
__________________
Plus Strand HSPs:
Score = 580 (204.2 bits), Expect = 2.6e-55, P = 2.6e-55
Identities = 111/157 (70%), Positives = 123/157 (78%), Frame = +3
Query: 15 KEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGGDL 194
K AGRI L+ VPKTAENFRALCTGEKG G+SGKPL+YKG FHRIIP FM QGGD
Sbjct: 190 KPAGRIEFELFADVVPKTAENFRALCTGEKGTGRSGKPLYYKGCPFHRIIPQFMCQGGDF 249
Query: 195 TQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGRHV 374
T+ NG GGESIYGEKFADENF KH+ P LLSMANAGPNTNGSQFFITTV WLDG+HV
Sbjct: 250 TRMNGTGGESIYGEKFADENFSYKHSEPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHV 309
Query: 375 VFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
VFGKV++G +VV +EAEG +G PK V I G+L
Sbjct: 310 VFGKVVAGQEVVKMMEAEGRSNGQPKCAVEISSCGQL 346
>gi|6014890|sp|O49886|CYPH_LUPLU PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PPIASE)
(ROTAMASE) (CYCLOPHILIN) (CYCLOSPORIN A-BINDING PROTEIN)
>gi|2760537|emb|CAA76054.1| (Y16088) cytosolic form of cyclophilin
[Lupinus luteus] >gi|6003483|gb|AAF00471.1| (AF178458) cytosolic
cyclophilin [Lupinus luteus]
Length = 172
Frame 3 hits (HSPs): ______________________________________________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
__________________
Annotated Domains:
PFAM pro_isomerase: Cyclophilin type peptidyl 5..172
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 24..39
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 60..72
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 103..118
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 118..130
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 131..146
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 22..62
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 64..166
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 55..72
__________________
Plus Strand HSPs:
Score = 580 (204.2 bits), Expect = 2.6e-55, P = 2.6e-55
Identities = 109/155 (70%), Positives = 121/155 (78%), Frame = +3
Query: 21 AGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGGDLTQ 200
AGRIVM LY P+TAENFRALCTGEKG G+SGKPLHYKGS+FHR+IP+FM QGGD T
Sbjct: 17 AGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTA 76
Query: 201 GNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGRHVVF 380
GNG G ESIYG KFADENF +HTGPG+LSMANAG TNGSQFFI T T WLDG+HVVF
Sbjct: 77 GNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVF 136
Query: 381 GKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
GKV+ GM+VV IE G+ SG V I D G+L
Sbjct: 137 GKVIEGMNVVRDIEKVGSGSGKTSRPVTIADCGQL 171
>gi|9558358|emb|CAC00484.1| (AJ292563) peptidyl-prolyl cis-trans isomerase
[Neurospora crassa]
Length = 375
Frame 3 hits (HSPs): ______________________
__________________________________________________
Database sequence: | | | | 375
0 150 300
Plus Strand HSPs:
Score = 578 (203.5 bits), Expect = 4.2e-55, P = 4.2e-55
Identities = 113/159 (71%), Positives = 121/159 (76%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G K AGRIV LY VPKTAENFRALCTGEKG GK GKPLHYKGS+FHR+I FM+QGG
Sbjct: 21 GGKAAGRIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGG 80
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T GNG GGESIYG KF DENF+LKH P LLSMANAGP TNGSQFF+TTV T LDG+
Sbjct: 81 DFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGK 140
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
HVVFG+VLSG VV +IE TQ P VI D GEL
Sbjct: 141 HVVFGEVLSGKSVVRQIENLKTQGDKPTKDAVIADCGEL 179
>gi|3550686|emb|CAA08988.1| (AJ010066) cyclophilin (TcCYP) [Trypanosoma cruzi]
Length = 258
Frame 3 hits (HSPs): ________________________________
__________________________________________________
Database sequence: | | | | | | | 258
0 50 100 150 200 250
Plus Strand HSPs:
Score = 576 (202.8 bits), Expect = 6.9e-55, P = 6.9e-55
Identities = 108/160 (67%), Positives = 126/160 (78%), Frame = +3
Query: 15 KEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGGDL 194
K +GRI M LY VPKTAENFRALCTGEKG GKSGKPLHYKG FHR+IP FM+QGGD+
Sbjct: 35 KPSGRIKMELYADTVPKTAENFRALCTGEKGRGKSGKPLHYKGCVFHRVIPGFMIQGGDI 94
Query: 195 TQGNGMGGESIYGEKFADENF--KL-KHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDG 365
T+GNG GGESIYG F DE+F K KHTG G LSMANAGPNTNGSQFFI T T WLDG
Sbjct: 95 TRGNGTGGESIYGMNFRDESFSGKAGKHTGVGCLSMANAGPNTNGSQFFICTANTPWLDG 154
Query: 366 RHVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
+HVVFG+V G+DVV ++E G++SG + +++I D GE+
Sbjct: 155 KHVVFGRVTEGIDVVRRVERLGSESGKTRGRIIIADCGEV 194
>gi|849081|gb|AAD04195.1| (U17900) cyclophilin B precursor [Orpinomyces sp.
PC-2]
Length = 203
Frame 3 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | || 203
0 50 100 150 200
Plus Strand HSPs:
Score = 574 (202.1 bits), Expect = 1.1e-54, P = 1.1e-54
Identities = 112/161 (69%), Positives = 128/161 (79%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G K+ GRIV+GLYG+ VPKT ENFRAL TGEKG G YK S FHR+I FM+QGG
Sbjct: 39 GDKDLGRIVLGLYGEVVPKTVENFRALATGEKGYG-------YKNSKFHRVIKDFMIQGG 91
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T+G+G GG+SIYGE+FADENFKL+HTGPG+LSMANAG +TNGSQFFITTVTTSWLDGR
Sbjct: 92 DFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFITTVTTSWLDGR 151
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGT-PKSKVVIVDSGELPL 491
HVVFGKV+ GMDVV IE T G P + V+I D GELP+
Sbjct: 152 HVVFGKVIEGMDVVTAIETTKTLPGDRPATPVIIADCGELPV 193
>gi|1928939|gb|AAB51386.1| (U92087) stress responsive cyclophilin [Solanum
commersonii]
Length = 172
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 172
0 50 100 150
Plus Strand HSPs:
Score = 565 (198.9 bits), Expect = 1.0e-53, P = 1.0e-53
Identities = 106/160 (66%), Positives = 120/160 (75%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G AGR+VM L+ PKTAENFRALCTGEKG GK GKPLHYKGS+FHR+IP FM QGG
Sbjct: 13 GGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGG 72
Query: 189 DLTQGNGMGGE-SIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDG 365
D T GNG G E SIYG KF DENF KHTG G+LSMANAGP TNGSQF I + T WLDG
Sbjct: 73 DFTAGNGTGEEKSIYGAKFKDENFVKKHTGAGILSMANAGPGTNGSQFLICSAKTEWLDG 132
Query: 366 RHVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGEL 485
+HVVFG+V+ G+DV+ K EA G+ SG VV+ D G+L
Sbjct: 133 KHVVFGQVVEGLDVIKKAEAVGSSSGRCSKPVVVADCGQL 172
>gi|3777556|gb|AAC64933.1| (AF078071) cyclophilin [Griffithsia japonica]
Length = 162
Frame 3 hits (HSPs): _______________________________________________
__________________________________________________
Database sequence: | | | | | 162
0 50 100 150
Plus Strand HSPs:
Score = 565 (198.9 bits), Expect = 1.0e-53, P = 1.0e-53
Identities = 112/159 (70%), Positives = 126/159 (79%), Frame = +3
Query: 6 AGAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQG 185
AG K +GRIVM L VPKTAENFRALCTGEKG G +KGS FHR+IP FMLQG
Sbjct: 11 AG-KPSGRIVMELRPDVVPKTAENFRALCTGEKGFG-------FKGSVFHRVIPGFMLQG 62
Query: 186 GDLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDG 365
GD T+G+G GG+SIYGEKF DENF LKHTGPG LSMANAGPNTNGSQFFI T TTSWLDG
Sbjct: 63 GDFTRGDGTGGKSIYGEKFEDENFTLKHTGPGTLSMANAGPNTNGSQFFICTETTSWLDG 122
Query: 366 RHVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGE 482
+HVVFGKV+ GM+VV +EA GT+SG+ KV + D+GE
Sbjct: 123 KHVVFGKVVEGMNVVRAVEAVGTRSGSTSQKVSVTDAGE 161
>gi|544125|sp|P35627|CYP2_ARATH PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PPIASE)
(ROTAMASE) (CYCLOPHILIN) (CYCLOSPORIN A-BINDING PROTEIN)
>gi|81651|pir||S22496 peptidylprolyl isomerase (EC 5.2.1.8) -
Arabidopsis thaliana >gi|16248|emb|CAA45161.1| (X63616)
cyclophorin-like protein [Arabidopsis thaliana]
Length = 169
Frame 3 hits (HSPs): ________________________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 169
0 50 100 150
__________________
Annotated Domains:
BLOCKS BL00170A: Cyclophilin-type peptidyl-prol 15..41
BLOCKS BL00170B: Cyclophilin-type peptidyl-prol 52..91
BLOCKS BL00170C: Cyclophilin-type peptidyl-prol 99..143
DOMO DM00129: CYCLOPHILIN-TYPEPEPTIDYL-PROLYL 1..168
PFAM pro_isomerase: Cyclophilin type peptidyl 3..169
PRINTS CSAPPISMRASE1: Cyclophilin motif I - 4 21..36
PRINTS CSAPPISMRASE2: Cyclophilin motif II - 4 57..69
PRINTS CSAPPISMRASE3: Cyclophilin motif III - 4 100..115
PRINTS CSAPPISMRASE4: Cyclophilin motif IV - 4 115..127
PRINTS CSAPPISMRASE5: Cyclophilin motif V - 4 128..143
PRODOM PD000502: CYPH(19) CYPB(8) CYP1(3) 20..59
PRODOM PD000341: CYPH(24) CYPB(13) CYP4(4) 61..164
PROSITE CSA_PPIASE_1: Cyclophilin-type peptidyl- 52..69
__________________
Plus Strand HSPs:
Score = 562 (197.8 bits), Expect = 2.1e-53, P = 2.1e-53
Identities = 114/159 (71%), Positives = 124/159 (77%), Frame = +3
Query: 9 GAKEAGRIVMGLYGKAVPKTAENFRALCTGEKGAGKSGKPLHYKGSSFHRIIPSFMLQGG 188
G + AGRI+M L+ VPKTAENFRALCTGEKG G SGK + Y+GS FHR+IP FMLQGG
Sbjct: 11 GGQPAGRIIMELFPD-VPKTAENFRALCTGEKGIGPSGKKMTYEGSVFHRVIPKFMLQGG 69
Query: 189 DLTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGR 368
D T GNG GGESIYG KFADENF KHT PGLLSMANAGP TNGSQFFITTV T LDG+
Sbjct: 70 DFTLGNGRGGESIYGAKFADENFIHKHTTPGLLSMANAGPGTNGSQFFITTVATPHLDGK 129
Query: 369 HVVFGKVLSGMDVVYKIEAEGTQSGT-PKSKVVIVDSGEL 485
HVVFGKV+ GMDVV KIEA T G P S+V I G+L
Sbjct: 130 HVVFGKVVEGMDVVRKIEATQTDRGDKPLSEVKIAKCGQL 169
WARNING: HSPs involving 299 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.99
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.321 0.141 0.420
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.359 0.158 0.684
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.346 0.149 0.488
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.342 0.153 0.518
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.357 0.159 0.578
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.346 0.146 0.509
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 196 195 10. 76 3 12 22 0.091 35
31 0.10 38
+2 0 197 196 10. 76 3 12 22 0.092 35
31 0.10 38
+1 0 197 196 10. 76 3 12 22 0.092 35
31 0.10 38
-1 0 197 196 10. 76 3 12 22 0.092 35
31 0.10 38
-2 0 197 196 10. 76 3 12 22 0.092 35
31 0.10 38
-3 0 196 196 10. 76 3 12 22 0.092 35
31 0.10 38
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 349
No. of states in DFA: 594 (59 KB)
Total size of DFA: 237 KB (256 KB)
Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 205.72u 1.05s 206.77t Elapsed: 00:00:47
Total cpu time: 205.77u 1.09s 206.86t Elapsed: 00:00:47
Start: Fri Jan 18 13:21:06 2002 End: Fri Jan 18 13:21:53 2002
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000