BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SMT0008
(847 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148993617|ref|ZP_01823088.1| ABC transporter, permease p... 1396 0.0
gi|149003099|ref|ZP_01828008.1| ABC transporter, permease p... 1395 0.0
gi|149012794|ref|ZP_01833739.1| ABC transporter, permease p... 1395 0.0
gi|148997967|ref|ZP_01825480.1| ABC transporter, permease p... 1394 0.0
gi|149007727|ref|ZP_01831336.1| ABC transporter, permease p... 1392 0.0
gi|149020150|ref|ZP_01835124.1| ABC transporter, permease p... 1392 0.0
gi|148988875|ref|ZP_01820290.1| ABC transporter, permease p... 1392 0.0
gi|15902035|ref|NP_346639.1| ABC transporter, permease prot... 1389 0.0
gi|15904077|ref|NP_359627.1| hypothetical protein spr2036 [... 1388 0.0
gi|148984534|ref|ZP_01817822.1| ABC transporter, permease p... 1369 0.0
gi|111658638|ref|ZP_01409288.1| hypothetical protein SpneT_... 1363 0.0
gi|157075580|gb|ABV10263.1| membrane protein, putative [Str... 887 0.0
gi|125719151|ref|YP_001036284.1| ABC transporter, permease ... 869 0.0
gi|146319843|ref|YP_001199555.1| Predicted membrane protein... 775 0.0
gi|81097162|ref|ZP_00875469.1| conserved hypothetical prote... 771 0.0
gi|76787776|ref|YP_330720.1| hypothetical protein SAK_2130 ... 723 0.0
gi|22538306|ref|NP_689157.1| ABC transporter, permease prot... 721 0.0
gi|77405608|ref|ZP_00782697.1| ABC transporter, permease pr... 720 0.0
gi|77411789|ref|ZP_00788125.1| ABC transporter, permease pr... 719 0.0
gi|77407666|ref|ZP_00784421.1| ABC transporter, permease pr... 716 0.0
gi|55821988|ref|YP_140430.1| ABC transporter membrane-spann... 691 0.0
gi|139474630|ref|YP_001129346.1| hypothetical protein SpyM5... 665 0.0
gi|71904557|ref|YP_281360.1| ABC transporter, permease prot... 664 0.0
gi|24380488|ref|NP_722443.1| conserved hypothetical protein... 663 0.0
gi|94991492|ref|YP_599592.1| ABC transporter, permease prot... 662 0.0
gi|19747042|ref|NP_608178.1| hypothetical protein spyM18_22... 662 0.0
gi|94995371|ref|YP_603469.1| ABC transporter, permease prot... 662 0.0
gi|15675943|ref|NP_270117.1| hypothetical protein SPy_2211 ... 661 0.0
gi|50915226|ref|YP_061198.1| ABC transporter, permease prot... 660 0.0
gi|21911397|ref|NP_665665.1| putative ABC transporter, perm... 660 0.0
gi|15672817|ref|NP_266991.1| hypothetical protein L48341 [L... 643 0.0
gi|125624518|ref|YP_001033001.1| ABC transporter permease p... 642 0.0
gi|116511648|ref|YP_808864.1| Predicted membrane protein [L... 635 e-180
gi|29374690|ref|NP_813842.1| hypothetical protein EF0032 [E... 534 e-149
gi|69247201|ref|ZP_00604263.1| membrane protein, putative [... 510 e-142
gi|116628678|ref|YP_821297.1| Predicted membrane protein [S... 479 e-133
gi|116491890|ref|YP_803625.1| Predicted membrane protein [P... 393 e-107
gi|156867438|gb|EDO60810.1| hypothetical protein CLOLEP_024... 273 3e-71
gi|3043878|gb|AAC14608.1| transmembrane protein Tmp5 [Lacto... 241 2e-61
gi|28378273|ref|NP_785165.1| integral membrane protein [Lac... 236 5e-60
gi|56808871|ref|ZP_00366582.1| COG4485: Predicted membrane ... 218 1e-54
gi|90962064|ref|YP_535980.1| Hypothetical membrane spanning... 213 4e-53
gi|81428946|ref|YP_395946.1| Hypothetical membrane protein ... 206 7e-51
gi|116334644|ref|YP_796171.1| Predicted membrane protein [L... 206 7e-51
gi|29377393|ref|NP_816547.1| hypothetical protein EF2929 [E... 204 2e-50
gi|148544436|ref|YP_001271806.1| membrane protein-like prot... 204 3e-50
gi|68160770|gb|AAY86831.1| unknown integral membrane protei... 203 5e-50
gi|154482541|ref|ZP_02024989.1| hypothetical protein EUBVEN... 197 3e-48
gi|116333640|ref|YP_795167.1| Predicted membrane protein [L... 193 4e-47
gi|116492494|ref|YP_804229.1| Predicted membrane protein [P... 191 2e-46
gi|116495144|ref|YP_806878.1| Predicted membrane protein [L... 191 2e-46
gi|42518371|ref|NP_964301.1| hypothetical protein LJ0284 [L... 189 9e-46
gi|156864698|gb|EDO58129.1| hypothetical protein CLOL250_01... 187 2e-45
gi|116617591|ref|YP_817962.1| Predicted membrane protein [L... 181 2e-43
gi|118586751|ref|ZP_01544188.1| integral membrane protein [... 177 2e-42
gi|116491242|ref|YP_810786.1| Predicted membrane protein [O... 176 8e-42
gi|81428815|ref|YP_395815.1| Hypothetical membrane protein ... 174 2e-41
gi|116494607|ref|YP_806341.1| Predicted membrane protein [L... 173 6e-41
gi|116630016|ref|YP_815188.1| Predicted membrane protein [L... 173 6e-41
gi|42519497|ref|NP_965427.1| hypothetical protein LJ1621 [L... 170 4e-40
gi|42518370|ref|NP_964300.1| hypothetical protein LJ0283 [L... 167 4e-39
gi|24380402|ref|NP_722357.1| putative transmembrane protein... 166 6e-39
gi|116333022|ref|YP_794549.1| Predicted membrane protein [L... 150 4e-34
gi|24380400|ref|NP_722355.1| putative transmembrane protein... 149 9e-34
gi|28378158|ref|NP_785050.1| integral membrane protein [Lac... 144 2e-32
gi|58337775|ref|YP_194360.1| putative ABC transporter perme... 142 8e-32
gi|116514425|ref|YP_813331.1| Predicted membrane protein [L... 133 5e-29
gi|104774330|ref|YP_619310.1| hypothetical protein Ldb1484 ... 132 7e-29
gi|116628951|ref|YP_814123.1| Predicted membrane protein [L... 129 7e-28
gi|56808872|ref|ZP_00366583.1| COG4485: Predicted membrane ... 129 1e-27
gi|156865089|gb|EDO58520.1| hypothetical protein CLOL250_00... 119 1e-24
gi|154685324|ref|YP_001420485.1| FhO [Bacillus amyloliquefa... 104 2e-20
gi|116332859|ref|YP_794386.1| Predicted membrane protein [L... 102 8e-20
gi|52079316|ref|YP_078107.1| conserved membrane protein Yfh... 101 2e-19
gi|81096945|ref|ZP_00875267.1| putative transmembrane prote... 101 3e-19
gi|16077927|ref|NP_388741.1| hypothetical protein BSU08610 ... 100 8e-19
gi|153812386|ref|ZP_01965054.1| hypothetical protein RUMOBE... 99 1e-18
gi|30023461|ref|NP_835092.1| Multidrug resistance protein B... 98 2e-18
gi|153812385|ref|ZP_01965053.1| hypothetical protein RUMOBE... 94 3e-17
gi|75759892|ref|ZP_00739965.1| Integral membrane protein [B... 94 5e-17
gi|81096944|ref|ZP_00875266.1| putative transmembrane prote... 92 2e-16
gi|153166407|ref|ZP_01926993.1| hypothetical protein LMHG_0... 87 5e-15
gi|153812393|ref|ZP_01965061.1| hypothetical protein RUMOBE... 86 1e-14
gi|152977611|ref|YP_001377128.1| multidrug resistance prote... 86 1e-14
gi|16803119|ref|NP_464604.1| hypothetical protein lmo1079 [... 84 3e-14
gi|153195876|ref|ZP_01940284.1| hypothetical protein LMRG_0... 84 3e-14
gi|153174145|ref|ZP_01929707.1| hypothetical protein LMIG_0... 84 3e-14
gi|70726673|ref|YP_253587.1| hypothetical protein SH1672 [S... 83 6e-14
gi|56962679|ref|YP_174405.1| hypothetical protein ABC0905 [... 75 2e-11
gi|153812394|ref|ZP_01965062.1| hypothetical protein RUMOBE... 73 8e-11
gi|153811222|ref|ZP_01963890.1| hypothetical protein RUMOBE... 67 7e-09
gi|27467835|ref|NP_764472.1| hypothetical protein SE0917 [S... 64 3e-08
gi|56964091|ref|YP_175822.1| hypothetical protein ABC2326 [... 59 1e-06
gi|116513921|ref|YP_812827.1| 4-amino-4-deoxy-L-arabinose t... 57 5e-06
gi|104773914|ref|YP_618894.1| hypothetical protein Ldb0855 ... 57 7e-06
>gi|148993617|ref|ZP_01823088.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae SP9-BS68]
gi|147927838|gb|EDK78860.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae SP9-BS68]
Length = 850
Score = 1396 bits (3613), Expect = 0.0, Method: Composition-based stats.
Identities = 793/850 (93%), Positives = 818/850 (96%), Gaps = 3/850 (0%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
MK F KTY TYF+SFIIP++IM GVYLSQGIYWNSD SPLLGDGFHQYVIFD+ALRNILH
Sbjct: 1 MKSFLKTYRTYFISFIIPVVIMSGVYLSQGIYWNSDNSPLLGDGFHQYVIFDVALRNILH 60
Query: 61 GNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
GN SLFYTFTSGLGLNFYALSSYYLGSFL+PLVYFFDLTNMPDAVYLTTLLKFGLIGLST
Sbjct: 61 GNSSLFYTFTSGLGLNFYALSSYYLGSFLAPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
Query: 121 YFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKK 180
+FSLNKLFQSIP LKLALSTSYALM FTVSQLEIKTWLDVFILIPLIITGL +LIT+KK
Sbjct: 121 FFSLNKLFQSIPQTLKLALSTSYALMGFTVSQLEIKTWLDVFILIPLIITGLHLLITEKK 180
Query: 181 FLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASL 240
LLYFTSLSILFIQNYYFGYMT LFLIFWYLCQISWDFKTRKSS LDFI+ S LAGMASL
Sbjct: 181 LLLYFTSLSILFIQNYYFGYMTVLFLIFWYLCQISWDFKTRKSSVLDFIVISFLAGMASL 240
Query: 241 ILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF 300
I+ LPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF
Sbjct: 241 IMTLPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF 300
Query: 301 ILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTL 360
ILTILFFTLKSI+FHVKLIY IFF FLIASFYIE LDLFWQGMHTPNMFLHRYAWIFSTL
Sbjct: 301 ILTILFFTLKSIRFHVKLIYIIFFAFLIASFYIEALDLFWQGMHTPNMFLHRYAWIFSTL 360
Query: 361 LIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
LIYTAAEVL RLKE+K+WNFLVSLFL+VTGFLATIYLKSHYSFLTDLNILLTLEFLVVYS
Sbjct: 361 LIYTAAEVLKRLKELKVWNFLVSLFLVVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
Query: 421 LLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMES 480
LLLLAVIKKFISVNLFAILISLFI+VEMSLNASSQMDGIAKEWGFASRS+Y+RDIPAMES
Sbjct: 421 LLLLAVIKKFISVNLFAILISLFILVEMSLNASSQMDGIAKEWGFASRSAYSRDIPAMES 480
Query: 481 FSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNL 540
FST IGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRS+SSTLDKLGFKSSGTNLNL
Sbjct: 481 FSTYIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSSSSTLDKLGFKSSGTNLNL 540
Query: 541 RYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDV 600
RYANNSILADSLFGIQYNISD+PIDKYGFKDIYQKDNL LYENQ+SLPIA ASQ VYNDV
Sbjct: 541 RYANNSILADSLFGIQYNISDSPIDKYGFKDIYQKDNLTLYENQYSLPIAVASQSVYNDV 600
Query: 601 KFNEHTLDNQASFLNQLANVDFDYFSPILYEKT---ENTDDLISVTSSSNEDAAIQYQIE 657
KFNEHTLDNQASFLNQLANV+FDYFSPI YEKT ENT+DLISVTSSSNEDAAIQYQIE
Sbjct: 601 KFNEHTLDNQASFLNQLANVNFDYFSPIPYEKTEKIENTNDLISVTSSSNEDAAIQYQIE 660
Query: 658 VPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVS 717
VPENSQVYLSF NLHFSNDKQKKVDILVN EKKTFTTDN FSFFNLGYTKEKKTFNINVS
Sbjct: 661 VPENSQVYLSFINLHFSNDKQKKVDILVNGEKKTFTTDNVFSFFNLGYTKEKKTFNINVS 720
Query: 718 FPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP 777
FPGNSQVSFESPTFYRLDT+T TEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP
Sbjct: 721 FPGNSQVSFESPTFYRLDTKTFTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP 780
Query: 778 YDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 837
YDKGWSAYQDGKKIEIKQAQTGFMKVD+PKGKGTITLSFIPNGFITGAICSFTSLLLFGI
Sbjct: 781 YDKGWSAYQDGKKIEIKQAQTGFMKVDIPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 840
Query: 838 YNHRQKSSKA 847
YNHR+KSSKA
Sbjct: 841 YNHRRKSSKA 850
>gi|149003099|ref|ZP_01828008.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae SP14-BS69]
gi|147758840|gb|EDK65836.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae SP14-BS69]
Length = 850
Score = 1395 bits (3611), Expect = 0.0, Method: Composition-based stats.
Identities = 794/850 (93%), Positives = 818/850 (96%), Gaps = 3/850 (0%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
MK F KTY TYF+SFIIP++IM GVYLSQGIYWNSD SPLLGDGFHQYVIFDIALRNILH
Sbjct: 1 MKSFLKTYRTYFISFIIPVVIMSGVYLSQGIYWNSDNSPLLGDGFHQYVIFDIALRNILH 60
Query: 61 GNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
GN SLFYTFTSGLGLNFYALSSYYLGSFL+PLVYFFDLTNMPDA+YLTTLLKFGLIGLST
Sbjct: 61 GNSSLFYTFTSGLGLNFYALSSYYLGSFLAPLVYFFDLTNMPDAIYLTTLLKFGLIGLST 120
Query: 121 YFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKK 180
+FSLNKLFQSIP LKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGL +LIT+KK
Sbjct: 121 FFSLNKLFQSIPQTLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLHLLITEKK 180
Query: 181 FLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASL 240
LLYFTSLSILFIQNYYFGYMT LFLIFWYLCQISWDFKTRKSS LDFI+ S LAGMASL
Sbjct: 181 LLLYFTSLSILFIQNYYFGYMTVLFLIFWYLCQISWDFKTRKSSVLDFIVISFLAGMASL 240
Query: 241 ILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF 300
I+ LPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF
Sbjct: 241 IMTLPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF 300
Query: 301 ILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTL 360
ILTILFFTLKSIKFHVKLIY IFF FLIASFYIE LDLFWQGMHTPNMFLHRYAWIFSTL
Sbjct: 301 ILTILFFTLKSIKFHVKLIYVIFFAFLIASFYIEALDLFWQGMHTPNMFLHRYAWIFSTL 360
Query: 361 LIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
LIYTAAEVL RLKE+K+WNFLVSLFL+V GFLATIYLKSHYSFLTDLNILLTLEFLVVYS
Sbjct: 361 LIYTAAEVLKRLKELKVWNFLVSLFLVVAGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
Query: 421 LLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMES 480
LLLLAVIKKFISVNLFAILISLFI+VEMSLNASSQMDGIAKEWGFASRS+Y+RDIPAMES
Sbjct: 421 LLLLAVIKKFISVNLFAILISLFILVEMSLNASSQMDGIAKEWGFASRSAYSRDIPAMES 480
Query: 481 FSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNL 540
FST IGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRS+SSTLDKLGFKSSGTNLNL
Sbjct: 481 FSTYIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSSSSTLDKLGFKSSGTNLNL 540
Query: 541 RYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDV 600
RYANNSILADSLFGIQYNISD+PIDKYGFKDIYQKDNL LYENQ+SLPIA ASQ VYNDV
Sbjct: 541 RYANNSILADSLFGIQYNISDSPIDKYGFKDIYQKDNLTLYENQYSLPIAVASQSVYNDV 600
Query: 601 KFNEHTLDNQASFLNQLANVDFDYFSPILYEKT---ENTDDLISVTSSSNEDAAIQYQIE 657
KFNEHTLDNQASFLNQLANV+FDYFSPI YEKT ENT+DLISVTSSSNEDAAIQYQIE
Sbjct: 601 KFNEHTLDNQASFLNQLANVNFDYFSPISYEKTEKIENTNDLISVTSSSNEDAAIQYQIE 660
Query: 658 VPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVS 717
VPENSQVYLSF NLHFSNDKQKKVDILVN EKKTFTTDN FSFFNLGYTKEKKTFNINVS
Sbjct: 661 VPENSQVYLSFINLHFSNDKQKKVDILVNGEKKTFTTDNVFSFFNLGYTKEKKTFNINVS 720
Query: 718 FPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP 777
FPGNSQVSFESPTFYRLDT+T TEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP
Sbjct: 721 FPGNSQVSFESPTFYRLDTKTFTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP 780
Query: 778 YDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 837
YDKGWSAYQDGKKIEIKQAQTGFMKVD+PKGKGTITLSFIPNGFITGAICSFTSLLLFGI
Sbjct: 781 YDKGWSAYQDGKKIEIKQAQTGFMKVDIPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 840
Query: 838 YNHRQKSSKA 847
YNHR+KSSKA
Sbjct: 841 YNHRRKSSKA 850
>gi|149012794|ref|ZP_01833739.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae SP19-BS75]
gi|147763225|gb|EDK70164.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae SP19-BS75]
Length = 847
Score = 1395 bits (3611), Expect = 0.0, Method: Composition-based stats.
Identities = 792/847 (93%), Positives = 817/847 (96%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
MK F KTY TYF+SFIIP++IM GVYLSQGIYWNSD SPLLGDGFHQYVIFD+ALRNILH
Sbjct: 1 MKSFLKTYRTYFISFIIPVVIMSGVYLSQGIYWNSDNSPLLGDGFHQYVIFDVALRNILH 60
Query: 61 GNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
GN SLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST
Sbjct: 61 GNSSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
Query: 121 YFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKK 180
+FSLNKLFQSIP LKLALSTSY LMSFTVSQLEIKTWLDVFILIPLIITGL +LIT+KK
Sbjct: 121 FFSLNKLFQSIPQTLKLALSTSYTLMSFTVSQLEIKTWLDVFILIPLIITGLHLLITEKK 180
Query: 181 FLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASL 240
LLYFTSLSILFIQNYYFGYMT LFLIFWYLCQISWDFKTRKSS LDFI+ S LAGMASL
Sbjct: 181 LLLYFTSLSILFIQNYYFGYMTVLFLIFWYLCQISWDFKTRKSSVLDFIVISFLAGMASL 240
Query: 241 ILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF 300
I+ LPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF
Sbjct: 241 IMTLPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF 300
Query: 301 ILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTL 360
ILTILFFTLKSIKFHVKLIY +FF FLIASFYIE LDLFWQGMHTPNMFLHRYAWIFSTL
Sbjct: 301 ILTILFFTLKSIKFHVKLIYVLFFAFLIASFYIEALDLFWQGMHTPNMFLHRYAWIFSTL 360
Query: 361 LIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
LIYTAAEVL RLKE+K+WNFLVSLFL+VTGFLATIYLKSHYSFLTDLNILLTLEFLVVYS
Sbjct: 361 LIYTAAEVLKRLKELKVWNFLVSLFLVVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
Query: 421 LLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMES 480
LLLLAVIKKFISVNLFAILISLFI+VEMSLNASSQMDGIAKEWGFASRS+Y+RDIPAMES
Sbjct: 421 LLLLAVIKKFISVNLFAILISLFILVEMSLNASSQMDGIAKEWGFASRSTYSRDIPAMES 480
Query: 481 FSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNL 540
FST IGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRS+SSTLDKLGFKSSGTNLNL
Sbjct: 481 FSTYIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSSSSTLDKLGFKSSGTNLNL 540
Query: 541 RYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDV 600
RYANNSILADSLFGIQYNISD+PIDKYGFKDIYQKDNL LYENQ+SLPIA ASQ VYNDV
Sbjct: 541 RYANNSILADSLFGIQYNISDSPIDKYGFKDIYQKDNLTLYENQYSLPIAVASQSVYNDV 600
Query: 601 KFNEHTLDNQASFLNQLANVDFDYFSPILYEKTENTDDLISVTSSSNEDAAIQYQIEVPE 660
KFNEHTLDNQASFLNQLANVDFDYFSPI YEK ENT++LISVTSSSNEDAAIQYQIEVPE
Sbjct: 601 KFNEHTLDNQASFLNQLANVDFDYFSPIPYEKIENTNNLISVTSSSNEDAAIQYQIEVPE 660
Query: 661 NSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPG 720
NSQ+YLSF NLHFSNDKQKKVDILVN EKKTFTTDN FSFFNLGYTKEKKTFNINVSFPG
Sbjct: 661 NSQIYLSFINLHFSNDKQKKVDILVNGEKKTFTTDNVFSFFNLGYTKEKKTFNINVSFPG 720
Query: 721 NSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDK 780
NSQVSFESPTFYRLDT+T TEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDK
Sbjct: 721 NSQVSFESPTFYRLDTKTFTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDK 780
Query: 781 GWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGIYNH 840
GWSAYQDGKKIEIKQAQTGFMKVD+PKGKGTITLSFIPNGFITGAICSFTSLLLFGIYNH
Sbjct: 781 GWSAYQDGKKIEIKQAQTGFMKVDIPKGKGTITLSFIPNGFITGAICSFTSLLLFGIYNH 840
Query: 841 RQKSSKA 847
R+KSSKA
Sbjct: 841 RRKSSKA 847
>gi|148997967|ref|ZP_01825480.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae SP11-BS70]
gi|147755977|gb|EDK63020.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae SP11-BS70]
Length = 850
Score = 1394 bits (3608), Expect = 0.0, Method: Composition-based stats.
Identities = 793/850 (93%), Positives = 817/850 (96%), Gaps = 3/850 (0%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
MK F KTY TYF+SFIIP++IM GVYLSQGIYWNSD SPLLGDGFHQYVIFD+ALRNILH
Sbjct: 1 MKSFLKTYRTYFISFIIPVVIMSGVYLSQGIYWNSDNSPLLGDGFHQYVIFDVALRNILH 60
Query: 61 GNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
GN SLFYTFTSGLGLNFYALSSYYLGSFL+PLVYFFDLTNMPDAVYLTTLLKFGLIGLST
Sbjct: 61 GNSSLFYTFTSGLGLNFYALSSYYLGSFLAPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
Query: 121 YFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKK 180
+FSLNKLFQSIP LKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGL +LIT+KK
Sbjct: 121 FFSLNKLFQSIPQTLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLHLLITEKK 180
Query: 181 FLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASL 240
LLYFTSLSILFIQNYYFGYMT LFLIFWYLCQISWDFKTRKSS LDFI+ S LAGMASL
Sbjct: 181 LLLYFTSLSILFIQNYYFGYMTVLFLIFWYLCQISWDFKTRKSSVLDFIVISFLAGMASL 240
Query: 241 ILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF 300
I+ LPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGL PF
Sbjct: 241 IMTLPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLFPF 300
Query: 301 ILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTL 360
ILTILFFTLKSIKFHVKLIY IFF FLIASFYIE LDLFWQGMHTPNMFLHRYAWIFSTL
Sbjct: 301 ILTILFFTLKSIKFHVKLIYVIFFAFLIASFYIEALDLFWQGMHTPNMFLHRYAWIFSTL 360
Query: 361 LIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
LIYTAAEVL RLKE+K+WNFLVSLFL+V GFLATIYLKSHYSFLTDLNILLTLEFLVVYS
Sbjct: 361 LIYTAAEVLKRLKELKVWNFLVSLFLVVAGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
Query: 421 LLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMES 480
LLLLAVIKKFISVNLFAILISLFI+VEMSLNASSQMDGIAKEWGFASRS+Y+RDIPAMES
Sbjct: 421 LLLLAVIKKFISVNLFAILISLFILVEMSLNASSQMDGIAKEWGFASRSAYSRDIPAMES 480
Query: 481 FSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNL 540
FST IGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRS+SSTLDKLGFKSSGTNLNL
Sbjct: 481 FSTYIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSSSSTLDKLGFKSSGTNLNL 540
Query: 541 RYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDV 600
RYANNSILADSLFGIQYNISD+PIDKYGFKDIYQKDNL LYENQ+SLPIA ASQ VYNDV
Sbjct: 541 RYANNSILADSLFGIQYNISDSPIDKYGFKDIYQKDNLTLYENQYSLPIAVASQSVYNDV 600
Query: 601 KFNEHTLDNQASFLNQLANVDFDYFSPILYEKT---ENTDDLISVTSSSNEDAAIQYQIE 657
KFNEHTLDNQASFLNQLANV+FDYFSPI YEKT ENT+DLISVTSSSNEDAAIQYQIE
Sbjct: 601 KFNEHTLDNQASFLNQLANVNFDYFSPIPYEKTEKIENTNDLISVTSSSNEDAAIQYQIE 660
Query: 658 VPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVS 717
VPENSQVYLSF NLHFSNDKQKKVDILVN EKKTFTTDN FSFFNLGYTKEKKTFNINVS
Sbjct: 661 VPENSQVYLSFINLHFSNDKQKKVDILVNGEKKTFTTDNVFSFFNLGYTKEKKTFNINVS 720
Query: 718 FPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP 777
FPGNSQVSFESPTFYRLDT+T TEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP
Sbjct: 721 FPGNSQVSFESPTFYRLDTKTFTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP 780
Query: 778 YDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 837
YDKGWSAYQDGKKIEIKQAQTGFMKVD+PKGKGTITLSFIPNGFITGAICSFTSLLLFGI
Sbjct: 781 YDKGWSAYQDGKKIEIKQAQTGFMKVDIPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 840
Query: 838 YNHRQKSSKA 847
YNHR+KSSKA
Sbjct: 841 YNHRRKSSKA 850
>gi|149007727|ref|ZP_01831336.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae SP18-BS74]
gi|147760722|gb|EDK67694.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae SP18-BS74]
Length = 850
Score = 1392 bits (3604), Expect = 0.0, Method: Composition-based stats.
Identities = 793/850 (93%), Positives = 817/850 (96%), Gaps = 3/850 (0%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
MK F KTY TYF+SFIIP++IM GVYLSQGIYWNSD SPLLGDGFHQYVIFDIALRNILH
Sbjct: 1 MKSFLKTYRTYFISFIIPVVIMSGVYLSQGIYWNSDNSPLLGDGFHQYVIFDIALRNILH 60
Query: 61 GNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
GN SLFYTFTSGLGLNFYALSSYYLGSFL+PLVYFFDLTNMPDA+YLTTLLKFGLIGLST
Sbjct: 61 GNSSLFYTFTSGLGLNFYALSSYYLGSFLAPLVYFFDLTNMPDAIYLTTLLKFGLIGLST 120
Query: 121 YFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKK 180
+FSLNKLFQSIP LKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGL +LIT+KK
Sbjct: 121 FFSLNKLFQSIPQTLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLHLLITEKK 180
Query: 181 FLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASL 240
LLYFTSLSILFIQNYYFGYMT LFLIFWYLCQISWDFKTRKSS LDFI+ S LAGMASL
Sbjct: 181 LLLYFTSLSILFIQNYYFGYMTVLFLIFWYLCQISWDFKTRKSSVLDFIVISFLAGMASL 240
Query: 241 ILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF 300
I+ LPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF
Sbjct: 241 IMTLPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF 300
Query: 301 ILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTL 360
ILTILFFTLKSIKFHVKLIY IFF FLIASFYIE LDLFWQGMHTPNMFLHRYAWIFSTL
Sbjct: 301 ILTILFFTLKSIKFHVKLIYVIFFAFLIASFYIEALDLFWQGMHTPNMFLHRYAWIFSTL 360
Query: 361 LIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
LIYTAAEVL RLKE+K+WNFLVSLFL+V GFLATIYLKSHYSFLTDLNILLTLEFLVVYS
Sbjct: 361 LIYTAAEVLKRLKELKVWNFLVSLFLVVAGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
Query: 421 LLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMES 480
LLLLAVIKKFISVNLFAILISLFI+VEMSLNASSQMDGIAKEWGFASRS+Y+RDIPAMES
Sbjct: 421 LLLLAVIKKFISVNLFAILISLFILVEMSLNASSQMDGIAKEWGFASRSAYSRDIPAMES 480
Query: 481 FSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNL 540
FST IGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRS+SSTLDKLGFKSSGTNLNL
Sbjct: 481 FSTYIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSSSSTLDKLGFKSSGTNLNL 540
Query: 541 RYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDV 600
RYANNSILADSLFGIQYNISD+PIDKYGFKDIYQKDNL LYENQ+SLPIA ASQ VYNDV
Sbjct: 541 RYANNSILADSLFGIQYNISDSPIDKYGFKDIYQKDNLTLYENQYSLPIAVASQSVYNDV 600
Query: 601 KFNEHTLDNQASFLNQLANVDFDYFSPILYEKT---ENTDDLISVTSSSNEDAAIQYQIE 657
KFNEHTLDNQASFLNQLANV+FDYFSPI YEKT ENT+DLISVTSSSNEDAAIQYQIE
Sbjct: 601 KFNEHTLDNQASFLNQLANVNFDYFSPIPYEKTEKIENTNDLISVTSSSNEDAAIQYQIE 660
Query: 658 VPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVS 717
VPENSQVYLSF NLHFSNDKQKKVDILVN EKKTFTTDN FSFFNLGYTKEKKTFNINVS
Sbjct: 661 VPENSQVYLSFINLHFSNDKQKKVDILVNGEKKTFTTDNVFSFFNLGYTKEKKTFNINVS 720
Query: 718 FPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP 777
FPGNSQVSFESPTFYRLDT+T TEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP
Sbjct: 721 FPGNSQVSFESPTFYRLDTKTFTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP 780
Query: 778 YDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 837
YDKGWSAYQDGKKIEIKQAQTGFMKVD+PKGKGTITLSFIP GFITGAICSFTSLLLFGI
Sbjct: 781 YDKGWSAYQDGKKIEIKQAQTGFMKVDIPKGKGTITLSFIPYGFITGAICSFTSLLLFGI 840
Query: 838 YNHRQKSSKA 847
YNHR+KSSKA
Sbjct: 841 YNHRRKSSKA 850
>gi|149020150|ref|ZP_01835124.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae SP23-BS72]
gi|147930828|gb|EDK81809.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae SP23-BS72]
Length = 850
Score = 1392 bits (3603), Expect = 0.0, Method: Composition-based stats.
Identities = 791/850 (93%), Positives = 816/850 (96%), Gaps = 3/850 (0%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
MK F KTY TYF+SFIIP++IM GVYLSQGIYWNSD SPLLGDGFHQYVIFD+ALRNILH
Sbjct: 1 MKSFLKTYRTYFISFIIPVVIMSGVYLSQGIYWNSDNSPLLGDGFHQYVIFDVALRNILH 60
Query: 61 GNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
GN SLFYTFTSGLGLNFYALSSYYLGSFL+PLVYFFDLTNMPDA+YLTTLLKFGLIGLST
Sbjct: 61 GNSSLFYTFTSGLGLNFYALSSYYLGSFLAPLVYFFDLTNMPDAIYLTTLLKFGLIGLST 120
Query: 121 YFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKK 180
+FSLNKLFQSIP LKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGL +LIT+KK
Sbjct: 121 FFSLNKLFQSIPQTLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLHLLITEKK 180
Query: 181 FLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASL 240
LLYFTSLSILFIQNYYFGYMT LFLIFWYLCQISWDFKTRKSS LDFI+ S LAGMASL
Sbjct: 181 LLLYFTSLSILFIQNYYFGYMTVLFLIFWYLCQISWDFKTRKSSVLDFIVISFLAGMASL 240
Query: 241 ILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF 300
I+ LPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGL PF
Sbjct: 241 IMTLPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLFPF 300
Query: 301 ILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTL 360
ILTILFFTLKSIKFHVKLIY IFF FLIASFYIE LDLFWQGMHTPNMFLHRYAWIFSTL
Sbjct: 301 ILTILFFTLKSIKFHVKLIYVIFFAFLIASFYIEALDLFWQGMHTPNMFLHRYAWIFSTL 360
Query: 361 LIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
LIYTAAEVL RLKE+K+WNFLVSLFL+V GFLATIYLKSHYSFLTDLNILLTLEFLVVYS
Sbjct: 361 LIYTAAEVLKRLKELKVWNFLVSLFLVVAGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
Query: 421 LLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMES 480
LLLLAVIKKFISVNLFAILISLFI+VEMSLNASSQMDGIAKEWGFASRS+Y+RDIPAMES
Sbjct: 421 LLLLAVIKKFISVNLFAILISLFILVEMSLNASSQMDGIAKEWGFASRSAYSRDIPAMES 480
Query: 481 FSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNL 540
FST IGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRS+SSTLDKLGFKSSGTNLNL
Sbjct: 481 FSTYIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSSSSTLDKLGFKSSGTNLNL 540
Query: 541 RYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDV 600
RYANNSILADSLFGIQYNISD+PIDKYGFKDIYQKDNL LYENQ+SLPIA ASQ VYNDV
Sbjct: 541 RYANNSILADSLFGIQYNISDSPIDKYGFKDIYQKDNLTLYENQYSLPIAVASQSVYNDV 600
Query: 601 KFNEHTLDNQASFLNQLANVDFDYFSPILYEKT---ENTDDLISVTSSSNEDAAIQYQIE 657
KFNEHTLDNQASFLNQLANV+FDYFSPI YEKT ENT+DLISVTSSSNEDAAIQYQIE
Sbjct: 601 KFNEHTLDNQASFLNQLANVNFDYFSPIPYEKTEKIENTNDLISVTSSSNEDAAIQYQIE 660
Query: 658 VPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVS 717
VPENSQVYLSF NLHFSNDKQKKVDILVN EKKTFTTDN FSFFNLGYTKEKKTFNINVS
Sbjct: 661 VPENSQVYLSFINLHFSNDKQKKVDILVNGEKKTFTTDNVFSFFNLGYTKEKKTFNINVS 720
Query: 718 FPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP 777
FPGNSQVSFESPTFYRLDT+T TE IQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP
Sbjct: 721 FPGNSQVSFESPTFYRLDTKTFTEVIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP 780
Query: 778 YDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 837
YDKGWSAYQDGKKIEIKQAQTGFMKVD+PKGKGTITLSFIPNGFITGAICSFTSLLLFGI
Sbjct: 781 YDKGWSAYQDGKKIEIKQAQTGFMKVDIPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 840
Query: 838 YNHRQKSSKA 847
YNHR+KSSKA
Sbjct: 841 YNHRRKSSKA 850
>gi|148988875|ref|ZP_01820290.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae SP6-BS73]
gi|147925686|gb|EDK76762.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae SP6-BS73]
Length = 850
Score = 1392 bits (3602), Expect = 0.0, Method: Composition-based stats.
Identities = 791/850 (93%), Positives = 817/850 (96%), Gaps = 3/850 (0%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
MK F KTY TYF+SFIIP++IM GVYLSQGIYWNSD SPLLGDGFHQYVIFD+ALRNILH
Sbjct: 1 MKSFLKTYRTYFISFIIPVVIMSGVYLSQGIYWNSDNSPLLGDGFHQYVIFDVALRNILH 60
Query: 61 GNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
GN SLFYTFTSGLGLNFYALSSYYLGSFL+PLVYFFDLTNMPDAVYLTTLLKFGLIGLST
Sbjct: 61 GNSSLFYTFTSGLGLNFYALSSYYLGSFLAPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
Query: 121 YFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKK 180
+FSLNKLFQSIP LKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGL +LIT+KK
Sbjct: 121 FFSLNKLFQSIPQTLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLHLLITEKK 180
Query: 181 FLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASL 240
LLYFTSLSILFIQNYYFGYMT LFLIFWYLCQISWDFKTRKSS LDFI+ S LAGMASL
Sbjct: 181 LLLYFTSLSILFIQNYYFGYMTVLFLIFWYLCQISWDFKTRKSSVLDFIVISFLAGMASL 240
Query: 241 ILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF 300
I+ +PTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGL PF
Sbjct: 241 IMTIPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLFPF 300
Query: 301 ILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTL 360
ILTILFFTLKSIKFHVKLIY IFF FLIASFYIE LDLFWQGMHTPNMFLHRYAWIFSTL
Sbjct: 301 ILTILFFTLKSIKFHVKLIYVIFFAFLIASFYIEALDLFWQGMHTPNMFLHRYAWIFSTL 360
Query: 361 LIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
LIYTAAEVL RLKE+K+WNFLVSLFL+V GFLATIYLKSHYSFLTDLNILLTLEFLVVYS
Sbjct: 361 LIYTAAEVLKRLKELKVWNFLVSLFLVVAGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
Query: 421 LLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMES 480
LLLLAVIKKFISVNLFAILISLFI+VEMSLNASSQMDGIAKEWGFASRS+Y+RDIPAMES
Sbjct: 421 LLLLAVIKKFISVNLFAILISLFILVEMSLNASSQMDGIAKEWGFASRSAYSRDIPAMES 480
Query: 481 FSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNL 540
FST IGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRS+SSTLDKLGFKSSGTNLNL
Sbjct: 481 FSTYIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSSSSTLDKLGFKSSGTNLNL 540
Query: 541 RYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDV 600
RYANNSILADSLFGIQYNISD+PIDKYGFKDIYQKDNL LYEN++SLPIA ASQ VYNDV
Sbjct: 541 RYANNSILADSLFGIQYNISDSPIDKYGFKDIYQKDNLTLYENKYSLPIAVASQSVYNDV 600
Query: 601 KFNEHTLDNQASFLNQLANVDFDYFSPILYEKT---ENTDDLISVTSSSNEDAAIQYQIE 657
KFNEHTLDNQASFLNQLANV+FDYFSPI YEKT ENT+DLISVTSSSNEDAAIQYQIE
Sbjct: 601 KFNEHTLDNQASFLNQLANVNFDYFSPIPYEKTEKIENTNDLISVTSSSNEDAAIQYQIE 660
Query: 658 VPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVS 717
VPENSQVYLSF NLHFSNDKQKKVDILVN EKKTFTTDN FSFFNLGYTKEKKTFNINVS
Sbjct: 661 VPENSQVYLSFINLHFSNDKQKKVDILVNGEKKTFTTDNVFSFFNLGYTKEKKTFNINVS 720
Query: 718 FPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP 777
FPGNSQVSFESPTFYRLDT+T TEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP
Sbjct: 721 FPGNSQVSFESPTFYRLDTKTFTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP 780
Query: 778 YDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 837
YDKGWSAYQDGKKIEIKQAQTGFMKVD+PKGKGTITLSFIPNGFITGAICSFTSLLLFGI
Sbjct: 781 YDKGWSAYQDGKKIEIKQAQTGFMKVDIPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 840
Query: 838 YNHRQKSSKA 847
YNHR+KSSKA
Sbjct: 841 YNHRRKSSKA 850
>gi|15902035|ref|NP_346639.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae TIGR4]
gi|14973742|gb|AAK76279.1| putative ABC transporter, permease protein [Streptococcus
pneumoniae TIGR4]
Length = 850
Score = 1389 bits (3595), Expect = 0.0, Method: Composition-based stats.
Identities = 790/850 (92%), Positives = 816/850 (96%), Gaps = 3/850 (0%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
MK F KTY TYF+SFIIP++IM GVYLSQ IYWNSD SPLLGDGFHQYVIFD+ALRNILH
Sbjct: 1 MKSFLKTYRTYFISFIIPVVIMSGVYLSQSIYWNSDNSPLLGDGFHQYVIFDVALRNILH 60
Query: 61 GNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
GN +LFYTFTSGLGLNFYALSSYYLGSFL+PLVYFFDLTNMPDA+YLTTLLKFGLIGLST
Sbjct: 61 GNSNLFYTFTSGLGLNFYALSSYYLGSFLAPLVYFFDLTNMPDAIYLTTLLKFGLIGLST 120
Query: 121 YFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKK 180
+FSLNKLFQSIP LKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGL +LIT+KK
Sbjct: 121 FFSLNKLFQSIPQILKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLHLLITEKK 180
Query: 181 FLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASL 240
LLYFTSLSILFIQNYYFGYMT LFLIFWYLCQISWDFKTRKSS LDFI+ S LAGMASL
Sbjct: 181 LLLYFTSLSILFIQNYYFGYMTVLFLIFWYLCQISWDFKTRKSSVLDFIVISFLAGMASL 240
Query: 241 ILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF 300
I+ LPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGL PF
Sbjct: 241 IMTLPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLFPF 300
Query: 301 ILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTL 360
ILTILFFTLKSIKFHVKLIY IFF FLIASFYIE LDLFWQGMHTPNMFLHRYAWIFSTL
Sbjct: 301 ILTILFFTLKSIKFHVKLIYVIFFAFLIASFYIEALDLFWQGMHTPNMFLHRYAWIFSTL 360
Query: 361 LIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
LIYTAAEVL RLKE+K+WNFLVSLFL+V GFLATIYLKSHYSFLTDLNILLTLEFLVVYS
Sbjct: 361 LIYTAAEVLKRLKELKVWNFLVSLFLVVAGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
Query: 421 LLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMES 480
LLLLAVIKKFISVNLFAILISLFI+VEMSLNASSQMDGIAKEWGFASRS+Y+RDIPAMES
Sbjct: 421 LLLLAVIKKFISVNLFAILISLFILVEMSLNASSQMDGIAKEWGFASRSAYSRDIPAMES 480
Query: 481 FSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNL 540
FST IGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRS+SSTLDKLGFKSSGTNLNL
Sbjct: 481 FSTYIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSSSSTLDKLGFKSSGTNLNL 540
Query: 541 RYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDV 600
RYANNSILADSLFGIQYNISD+PIDKYGFKDIYQKDNL LYENQ+SLPIA ASQ VYNDV
Sbjct: 541 RYANNSILADSLFGIQYNISDSPIDKYGFKDIYQKDNLTLYENQYSLPIAVASQSVYNDV 600
Query: 601 KFNEHTLDNQASFLNQLANVDFDYFSPILYEKT---ENTDDLISVTSSSNEDAAIQYQIE 657
KFNEHTLDNQASFLNQLANV+FDYFSPI YEKT ENT+DLISVTSSSNEDAAIQYQIE
Sbjct: 601 KFNEHTLDNQASFLNQLANVNFDYFSPIPYEKTEKIENTNDLISVTSSSNEDAAIQYQIE 660
Query: 658 VPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVS 717
VPENSQVYLSF NLHFSNDKQKKVDILVN EKKTFTTDN FSFFNLGYTKEKKTFNINVS
Sbjct: 661 VPENSQVYLSFINLHFSNDKQKKVDILVNGEKKTFTTDNVFSFFNLGYTKEKKTFNINVS 720
Query: 718 FPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP 777
FPGNSQVSFESPTFYRLDT+T TEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP
Sbjct: 721 FPGNSQVSFESPTFYRLDTKTFTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP 780
Query: 778 YDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 837
YDKGWSAYQDGKKIEIKQAQTGFMKVD+PKGKGTITLSFIPNGFITGAICSFTSLLLFGI
Sbjct: 781 YDKGWSAYQDGKKIEIKQAQTGFMKVDIPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 840
Query: 838 YNHRQKSSKA 847
YNHR+KSSKA
Sbjct: 841 YNHRRKSSKA 850
>gi|15904077|ref|NP_359627.1| hypothetical protein spr2036 [Streptococcus pneumoniae R6]
gi|116516813|ref|YP_817441.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae D39]
gi|15459743|gb|AAL00838.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116077389|gb|ABJ55109.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae D39]
Length = 850
Score = 1388 bits (3593), Expect = 0.0, Method: Composition-based stats.
Identities = 791/850 (93%), Positives = 815/850 (95%), Gaps = 3/850 (0%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
MK F KTY TYF+S IIP++IM GVYLSQGIYWNSD SPLLGDGFHQYVIFD+ALRNILH
Sbjct: 1 MKSFLKTYRTYFISLIIPVVIMSGVYLSQGIYWNSDNSPLLGDGFHQYVIFDVALRNILH 60
Query: 61 GNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
GN SLFYTFTSGLGLNFYALSSYYLGSFL+PLVYFFDLTNMPDAVYLTTLLKFGLIGLST
Sbjct: 61 GNSSLFYTFTSGLGLNFYALSSYYLGSFLAPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
Query: 121 YFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKK 180
+FSLNKLFQSIP LKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGL +LIT+KK
Sbjct: 121 FFSLNKLFQSIPQTLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLHLLITEKK 180
Query: 181 FLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASL 240
LLYFTSLSILFIQNYYFGYMT LFLIFWYLCQISWDFKTRKSS LDFI+ S LAGMASL
Sbjct: 181 LLLYFTSLSILFIQNYYFGYMTVLFLIFWYLCQISWDFKTRKSSVLDFIVISFLAGMASL 240
Query: 241 ILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF 300
I+ LPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGL PF
Sbjct: 241 IMTLPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLFPF 300
Query: 301 ILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTL 360
ILTILFFTLKSIKFHVKLIY IFF FLIASFYIE LDLFWQGMHTPNMFLHRYAWIFSTL
Sbjct: 301 ILTILFFTLKSIKFHVKLIYVIFFAFLIASFYIEALDLFWQGMHTPNMFLHRYAWIFSTL 360
Query: 361 LIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
LIYTAAEVL RLKE+K+WNFLVSLFL+V GFLATIYLKSHYSFLTDLNILLTLEFLVVYS
Sbjct: 361 LIYTAAEVLKRLKELKVWNFLVSLFLVVAGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
Query: 421 LLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMES 480
LLLLAVIKKFISVNLFAILISLFI+VEMSLNASSQMDGIAKEWGFASRS+Y+RDI AMES
Sbjct: 421 LLLLAVIKKFISVNLFAILISLFILVEMSLNASSQMDGIAKEWGFASRSAYSRDILAMES 480
Query: 481 FSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNL 540
FST IGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRS+SSTLDKLGFKSSGTNLNL
Sbjct: 481 FSTYIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSSSSTLDKLGFKSSGTNLNL 540
Query: 541 RYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDV 600
RYANNSILADSLFGIQYNISD+PIDKYGFKDIYQKDNL LYENQ+SLPIA ASQ VYNDV
Sbjct: 541 RYANNSILADSLFGIQYNISDSPIDKYGFKDIYQKDNLTLYENQYSLPIAVASQSVYNDV 600
Query: 601 KFNEHTLDNQASFLNQLANVDFDYFSPILYEKT---ENTDDLISVTSSSNEDAAIQYQIE 657
KFNEHTLDNQASFLNQLANV+FDYFSPI YEKT ENT+DLISVTSSSNEDAAIQYQIE
Sbjct: 601 KFNEHTLDNQASFLNQLANVNFDYFSPIPYEKTEKIENTNDLISVTSSSNEDAAIQYQIE 660
Query: 658 VPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVS 717
VPENSQVYLSF NLHFSNDKQKKVDILVN EKKTFTTDN FSFFNLGYTKEKKTFNINVS
Sbjct: 661 VPENSQVYLSFINLHFSNDKQKKVDILVNGEKKTFTTDNVFSFFNLGYTKEKKTFNINVS 720
Query: 718 FPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP 777
FPGNSQVSFESPTFYRLDT+T TEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP
Sbjct: 721 FPGNSQVSFESPTFYRLDTKTFTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIP 780
Query: 778 YDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 837
YDKGWSAYQDGKKIEIKQAQTGFMKVD+PKGKGTITLSFIPNGFITGAICSFTSLLLFGI
Sbjct: 781 YDKGWSAYQDGKKIEIKQAQTGFMKVDIPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 840
Query: 838 YNHRQKSSKA 847
YNHR+KSSKA
Sbjct: 841 YNHRRKSSKA 850
>gi|148984534|ref|ZP_01817822.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae SP3-BS71]
gi|147923311|gb|EDK74425.1| ABC transporter, permease protein, putative [Streptococcus
pneumoniae SP3-BS71]
Length = 829
Score = 1369 bits (3544), Expect = 0.0, Method: Composition-based stats.
Identities = 779/829 (93%), Positives = 802/829 (96%), Gaps = 3/829 (0%)
Query: 22 MIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFTSGLGLNFYALS 81
M GVYLSQGIYWNSD SPLLGDGFHQYVIFD+ALRNILHGN SLFYTFTSGLGLNFYALS
Sbjct: 1 MSGVYLSQGIYWNSDNSPLLGDGFHQYVIFDVALRNILHGNSSLFYTFTSGLGLNFYALS 60
Query: 82 SYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSIPNPLKLALST 141
SYYLGSFL+PLVYFFDLTNMPDA+YLTTLLKFGLIGLST+FSLNKLFQSIP LKLALST
Sbjct: 61 SYYLGSFLAPLVYFFDLTNMPDAIYLTTLLKFGLIGLSTFFSLNKLFQSIPQTLKLALST 120
Query: 142 SYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSILFIQNYYFGYM 201
SYALMSFTVSQLEIKTWLDVFILIPLIITGL +LIT+KK LLYFTSLSILFIQNYYFGYM
Sbjct: 121 SYALMSFTVSQLEIKTWLDVFILIPLIITGLHLLITEKKLLLYFTSLSILFIQNYYFGYM 180
Query: 202 TALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASLILILPTLFDLQTHGEKLTEVT 261
T LFLIFWYLCQISWDFKTRKSS LDFI+ S LAGMASLI+ LPTLFDLQTHGEKLTEVT
Sbjct: 181 TVLFLIFWYLCQISWDFKTRKSSVLDFIVISFLAGMASLIMTLPTLFDLQTHGEKLTEVT 240
Query: 262 KFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTLKSIKFHVKLIYA 321
KFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTLKSIKFHVKLIY
Sbjct: 241 KFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTLKSIKFHVKLIYV 300
Query: 322 IFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLNRLKEIKIWNFL 381
IFFTFLIASFYIE LDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVL RLKE+K+WNFL
Sbjct: 301 IFFTFLIASFYIEALDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLKRLKELKVWNFL 360
Query: 382 VSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILIS 441
VSLFL+VTGFLATIYLKSHYSFLTDLNILLTL+FLVVYSLLLLAVIKKFISVNLFAILIS
Sbjct: 361 VSLFLVVTGFLATIYLKSHYSFLTDLNILLTLKFLVVYSLLLLAVIKKFISVNLFAILIS 420
Query: 442 LFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMESFSTDIGNQFTRTEKLQTQTGN 501
LFI+VEMSLNASSQMDGIAKEWGFASRS+Y+RDIPAMESFST IGNQFTRTEKLQTQTGN
Sbjct: 421 LFILVEMSLNASSQMDGIAKEWGFASRSAYSRDIPAMESFSTYIGNQFTRTEKLQTQTGN 480
Query: 502 DSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNISD 561
DSMKFNYNGISQFSSVRNRS+SSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNISD
Sbjct: 481 DSMKFNYNGISQFSSVRNRSSSSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNISD 540
Query: 562 NPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEHTLDNQASFLNQLANVD 621
+PIDKYGFKDIYQKDNL LYENQ+SLPIA ASQ VYNDVKFNEHTLDNQASFLNQLANV+
Sbjct: 541 SPIDKYGFKDIYQKDNLTLYENQYSLPIAVASQSVYNDVKFNEHTLDNQASFLNQLANVN 600
Query: 622 FDYFSPILYEKT---ENTDDLISVTSSSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDKQ 678
FDYFSPI YEKT ENT+DLISVTSSSNEDAAIQYQIEVPENSQVYLSF NLHFSNDKQ
Sbjct: 601 FDYFSPIPYEKTEKIENTNDLISVTSSSNEDAAIQYQIEVPENSQVYLSFINLHFSNDKQ 660
Query: 679 KKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTQT 738
KKVDILVN EKKTFTTDN FSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDT+T
Sbjct: 661 KKVDILVNGEKKTFTTDNVFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTKT 720
Query: 739 LTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQT 798
TEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQT
Sbjct: 721 FTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQT 780
Query: 799 GFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGIYNHRQKSSKA 847
GFMKVD+PKGKGTITLSFIPNGFITGAICSFTSLLLFGIYNHR+KSSKA
Sbjct: 781 GFMKVDIPKGKGTITLSFIPNGFITGAICSFTSLLLFGIYNHRRKSSKA 829
>gi|111658638|ref|ZP_01409288.1| hypothetical protein SpneT_02000228 [Streptococcus pneumoniae
TIGR4]
Length = 829
Score = 1363 bits (3527), Expect = 0.0, Method: Composition-based stats.
Identities = 775/829 (93%), Positives = 798/829 (96%), Gaps = 3/829 (0%)
Query: 22 MIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFTSGLGLNFYALS 81
M GVYLSQ IYWNSD SPLLGDGFHQYVIFD+ALRNILHGN +LFYTFTSGLGLNFYALS
Sbjct: 1 MSGVYLSQSIYWNSDNSPLLGDGFHQYVIFDVALRNILHGNSNLFYTFTSGLGLNFYALS 60
Query: 82 SYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSIPNPLKLALST 141
SYYLGSFL+PLVYFFDLTNMPDA+YLTTLLKFGLIGLST+FSLNKLFQSIP LKLALST
Sbjct: 61 SYYLGSFLAPLVYFFDLTNMPDAIYLTTLLKFGLIGLSTFFSLNKLFQSIPQILKLALST 120
Query: 142 SYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSILFIQNYYFGYM 201
SYALMSFTVSQLEIKTWLDVFILIPLIITGL +LIT+KK LLYFTSLSILFIQNYYFGYM
Sbjct: 121 SYALMSFTVSQLEIKTWLDVFILIPLIITGLHLLITEKKLLLYFTSLSILFIQNYYFGYM 180
Query: 202 TALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASLILILPTLFDLQTHGEKLTEVT 261
T LFLIFWYLCQISWDFKTRKSS LDFI+ S LAGMASLI+ LPTLFDLQTHGEKLTEVT
Sbjct: 181 TVLFLIFWYLCQISWDFKTRKSSVLDFIVISFLAGMASLIMTLPTLFDLQTHGEKLTEVT 240
Query: 262 KFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTLKSIKFHVKLIYA 321
KFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGL PFILTILFFTLKSIKFHVKLIY
Sbjct: 241 KFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLFPFILTILFFTLKSIKFHVKLIYV 300
Query: 322 IFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLNRLKEIKIWNFL 381
IFF FLIASFYIE LDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVL RLKE+K+WNFL
Sbjct: 301 IFFAFLIASFYIEALDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLKRLKELKVWNFL 360
Query: 382 VSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILIS 441
VSLFL+V GFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILIS
Sbjct: 361 VSLFLVVAGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILIS 420
Query: 442 LFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMESFSTDIGNQFTRTEKLQTQTGN 501
LFI+VEMSLNASSQMDGIAKEWGFASRS+Y+RDIPAMESFST IGNQFTRTEKLQTQTGN
Sbjct: 421 LFILVEMSLNASSQMDGIAKEWGFASRSAYSRDIPAMESFSTYIGNQFTRTEKLQTQTGN 480
Query: 502 DSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNISD 561
DSMKFNYNGISQFSSVRNRS+SSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNISD
Sbjct: 481 DSMKFNYNGISQFSSVRNRSSSSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNISD 540
Query: 562 NPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEHTLDNQASFLNQLANVD 621
+PIDKYGFKDIYQKDNL LYENQ+SLPIA ASQ VYNDVKFNEHTLDNQASFLNQLANV+
Sbjct: 541 SPIDKYGFKDIYQKDNLTLYENQYSLPIAVASQSVYNDVKFNEHTLDNQASFLNQLANVN 600
Query: 622 FDYFSPILYEKT---ENTDDLISVTSSSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDKQ 678
FDYFSPI YEKT ENT+DLISVTSSSNEDAAIQYQIEVPENSQVYLSF NLHFSNDKQ
Sbjct: 601 FDYFSPIPYEKTEKIENTNDLISVTSSSNEDAAIQYQIEVPENSQVYLSFINLHFSNDKQ 660
Query: 679 KKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTQT 738
KKVDILVN EKKTFTTDN FSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDT+T
Sbjct: 661 KKVDILVNGEKKTFTTDNVFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTKT 720
Query: 739 LTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQT 798
TEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQT
Sbjct: 721 FTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQT 780
Query: 799 GFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGIYNHRQKSSKA 847
GFMKVD+PKGKGTITLSFIPNGFITGAICSFTSLLLFGIYNHR+KSSKA
Sbjct: 781 GFMKVDIPKGKGTITLSFIPNGFITGAICSFTSLLLFGIYNHRRKSSKA 829
>gi|157075580|gb|ABV10263.1| membrane protein, putative [Streptococcus gordonii str. Challis
substr. CH1]
Length = 864
Score = 887 bits (2291), Expect = 0.0, Method: Composition-based stats.
Identities = 499/854 (58%), Positives = 626/854 (73%), Gaps = 9/854 (1%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
+K + K YW YFV+F+IP +IM+ VYLSQGIYWNSDTSPLLGDGFHQYVIFD LRNILH
Sbjct: 4 IKNYLKKYWVYFVAFLIPFLIMVIVYLSQGIYWNSDTSPLLGDGFHQYVIFDTTLRNILH 63
Query: 61 GNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
G+ SLFYTFTSGLGLNFYAL+SYYLGSFLSP VYFF+L NMPDAVY+ TL+KFGLIGL+
Sbjct: 64 GSDSLFYTFTSGLGLNFYALTSYYLGSFLSPFVYFFNLENMPDAVYIFTLIKFGLIGLTA 123
Query: 121 YFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKK 180
SL +F+ IPN L L LST Y+LMSF SQ+EIKTWLDVFI+ PLI+ GL +L+ KK
Sbjct: 124 AISLKGIFKKIPNFLILMLSTCYSLMSFATSQIEIKTWLDVFIIAPLILYGLHLLLIKKN 183
Query: 181 FLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASL 240
+LYFTSLSILFIQNYYFGYM A+FLIFW+ Q +WDFK R +FLDF I S+L+G+ SL
Sbjct: 184 RVLYFTSLSILFIQNYYFGYMMAIFLIFWFFVQTTWDFKNRIKTFLDFTIVSILSGVTSL 243
Query: 241 ILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF 300
I+ILPT DL+THGEKLT V + TE +W+LD+FAK FIGSFDTTKYG+IPMI+VG++P
Sbjct: 244 IMILPTFLDLKTHGEKLTSVDRLFTEKTWFLDIFAKNFIGSFDTTKYGSIPMIYVGIVPL 303
Query: 301 ILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTL 360
+L ILFFTLKSIKFHVKL Y IASF +E LDLFWQGMH PNMFLHRY+W+FS
Sbjct: 304 LLAILFFTLKSIKFHVKLSYFFLIIIFIASFSLERLDLFWQGMHAPNMFLHRYSWLFSLF 363
Query: 361 LIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
+I+ AAE L RLK+IK N ++S ++ GF+ + HY FL +N +LTLEFL+ Y
Sbjct: 364 IIFLAAETLQRLKQIKFKNLIISFTILSIGFILVFVFRKHYDFLGPVNFILTLEFLLAYL 423
Query: 421 LLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMES 480
L+ K FIS +F I F+ E+SLNA Q+DGIAKEW FASRSSY +++ +++
Sbjct: 424 LIFGTFTKSFISKRVFYITTLAFVCFEVSLNAFYQVDGIAKEWVFASRSSYAKNLKQIDN 483
Query: 481 ---FSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTN 537
+S D +F RTE L QTGNDSMK+NYNGISQFSSVRN SSTLDKLGFKS+GTN
Sbjct: 484 LVKYSKDNNTEFFRTETLDPQTGNDSMKYNYNGISQFSSVRNTMTSSTLDKLGFKSTGTN 543
Query: 538 LNLRYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVY 597
LNLRY NNSIL D++F + YNIS+ KYGF I + NL LY+N+ + +AF + +Y
Sbjct: 544 LNLRYQNNSILMDAIFSLAYNISEVNPQKYGFTPIKTEKNLTLYQNKNATSLAFLTNKIY 603
Query: 598 NDVKFNEHTLDNQASFLNQLANVDFDYFSPIL----YEKTENTDDL-ISVTSSSNED-AA 651
DVKFN TLDNQ FLNQL+ +++ YF I + EN D + ++V +NE A+
Sbjct: 604 KDVKFNNLTLDNQTKFLNQLSGLNYKYFQKIYPINSHNIIENNDHITVNVDKENNESFAS 663
Query: 652 IQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKT 711
+ Y ++VPENSQVY+S N+HFSND Q VDI + +E + FTT+N F+FFNLG+ +K+T
Sbjct: 664 MTYTLDVPENSQVYVSLPNIHFSNDDQTVVDISIGNETRRFTTNNVFTFFNLGHFMDKQT 723
Query: 712 FNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTS 771
+ +FP NSQVSF+ P FY+++ EAI KI Q V V+T +++ Y Q+D+S
Sbjct: 724 VTVRFTFPDNSQVSFDKPEFYKVNINHFQEAIDKIHSQKVEVTTKNSQITVDYHAQKDSS 783
Query: 772 IFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTS 831
+F T+PYDKGWSA Q+G + I +AQ GFMKVDV KG G + L FIP GF G C
Sbjct: 784 LFLTLPYDKGWSATQNGHPVTIYKAQDGFMKVDVKKGSGRVILKFIPRGFKEGIGCFIFG 843
Query: 832 LLLFGIYNHRQKSS 845
+ LF +YN+++ +
Sbjct: 844 IALFTLYNYKKNDN 857
>gi|125719151|ref|YP_001036284.1| ABC transporter, permease component (possible copper exporter),
putative [Streptococcus sanguinis SK36]
gi|125499068|gb|ABN45734.1| ABC transporter, permease component (possible copper exporter),
putative [Streptococcus sanguinis SK36]
Length = 861
Score = 869 bits (2245), Expect = 0.0, Method: Composition-based stats.
Identities = 484/849 (57%), Positives = 609/849 (71%), Gaps = 10/849 (1%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
+K +FK W YF +F +P IM VYL GIYWNS+TSPLLGDGFHQYVIFD LRNILH
Sbjct: 4 IKEYFKKNWPYFCAFFLPFFIMFFVYLMYGIYWNSETSPLLGDGFHQYVIFDTNLRNILH 63
Query: 61 GNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
G S+FYTF+SGLG NFYALSSYYLGSFLSPLVYFFDL +MPDAVYL TL+KFGLIGLS
Sbjct: 64 GTDSIFYTFSSGLGQNFYALSSYYLGSFLSPLVYFFDLKSMPDAVYLFTLIKFGLIGLSA 123
Query: 121 YFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKK 180
+ S+ +F+ IP L + LSTS++LMSF+VSQLEIKTWLDVFIL PLI+ GL LIT K
Sbjct: 124 FISIKGIFKKIPALLIITLSTSFSLMSFSVSQLEIKTWLDVFILTPLIVLGLHRLITGKG 183
Query: 181 FLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASL 240
+LYFT+LSILFIQNYYFGYM A+FL+FWYL Q+SWDFK R S LDF + S LAG+ SL
Sbjct: 184 RVLYFTTLSILFIQNYYFGYMMAIFLVFWYLLQLSWDFKNRIKSLLDFTVVSALAGLTSL 243
Query: 241 ILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPF 300
I+ILPT D+ THGE LT+V+ TE SW+LD+FAK FIGSFDTTKYG+IPMI+VG P
Sbjct: 244 IMILPTYLDISTHGETLTKVSSLLTEKSWFLDMFAKNFIGSFDTTKYGSIPMIYVGTFPL 303
Query: 301 ILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTL 360
IL ILFFTLKSIKFHVKL Y + IASFY++ LDL WQGMH PNMFLHRY+W+FS +
Sbjct: 304 ILAILFFTLKSIKFHVKLCYFLLIVVFIASFYLQYLDLLWQGMHAPNMFLHRYSWLFSLI 363
Query: 361 LIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
+IY AAE LNR K++K+ N +S L+ GF+ T + HY FL N +LTLEFL+ Y
Sbjct: 364 VIYMAAETLNRWKDVKVMNVAISFTLLSLGFILTFIQRKHYDFLAPENYILTLEFLLAYL 423
Query: 421 LLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNR---DIPA 477
L+ + K I + ++ F+ E+SLN+ Q+ GIAKEW FA+RSSY+ +I
Sbjct: 424 LISFVLAKSSIQPKIILPVLLFFVTFELSLNSYYQVGGIAKEWVFATRSSYSSHLDEIDK 483
Query: 478 MESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTN 537
+ ++S F RTE+L QTGNDSMKFNYNGISQFSSVRN ASSTLDKLGFKS+GTN
Sbjct: 484 LVNYSKKENIDFFRTERLNPQTGNDSMKFNYNGISQFSSVRNTQASSTLDKLGFKSAGTN 543
Query: 538 LNLRYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVY 597
LNLRY NNSIL DS+FGI+YN+S+ K+GF + ++LY+N +L +AF + VY
Sbjct: 544 LNLRYQNNSILMDSIFGIRYNLSETDPQKFGFLPEKTEKEMSLYQNDAALGLAFLTNDVY 603
Query: 598 NDVKFNEHTLDNQASFLNQLANVDFDYFSPI----LYEKTENTDDLISVTSSSNED---A 650
+DVKF TLDNQ FLNQL DF Y+ + E + + ++V + A
Sbjct: 604 HDVKFTNLTLDNQTEFLNQLTGFDFKYYDKVDAITTNENVKQIGNRVTVDVDREHNTSFA 663
Query: 651 AIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKK 710
++ Y + VP NSQ+Y++ + FSND Q VDI VN+ + +TT+N F FFN GY + +
Sbjct: 664 SVVYTVNVPANSQLYVNVAGIDFSNDVQTDVDITVNNFTERYTTNNVFPFFNAGYFSQSQ 723
Query: 711 TFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDT 770
T +I +FP NS VSF++P F+ ++T+ IQK+KEQPV+ +T N V Y ++DT
Sbjct: 724 TVSIRFTFPNNSTVSFDTPEFFAVNTEQYQNVIQKLKEQPVSTTTDLNTVKTNYRAEKDT 783
Query: 771 SIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFT 830
S+FFTIPYDKGWSA +G+ + +K+AQ GFMK+DV KG+G + L+FIPNG G I +
Sbjct: 784 SLFFTIPYDKGWSATLNGEPVTLKRAQNGFMKLDVKKGEGNVVLTFIPNGLKEGGIAFIS 843
Query: 831 SLLLFGIYN 839
++LF YN
Sbjct: 844 GIILFVCYN 852
>gi|146319843|ref|YP_001199555.1| Predicted membrane protein [Streptococcus suis 05ZYH33]
gi|146322034|ref|YP_001201745.1| Predicted membrane protein [Streptococcus suis 98HAH33]
gi|145690649|gb|ABP91155.1| Predicted membrane protein [Streptococcus suis 05ZYH33]
gi|145692840|gb|ABP93345.1| Predicted membrane protein [Streptococcus suis 98HAH33]
Length = 859
Score = 775 bits (2000), Expect = 0.0, Method: Composition-based stats.
Identities = 441/844 (52%), Positives = 593/844 (70%), Gaps = 7/844 (0%)
Query: 2 KLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHG 61
K+F KT Y +SF+IP+ I+ V QGI+W SDT+ L DGFHQYVIF+ LRN LHG
Sbjct: 3 KIFTKTSIYYLLSFLIPLTIISIVLAFQGIWWGSDTTILASDGFHQYVIFNQTLRNTLHG 62
Query: 62 NGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTY 121
+GSLFYTF+SGLGLNFYALSSYYLGSFLSP+V+FFDL +MPDA+YL T++KFGL GLSTY
Sbjct: 63 DGSLFYTFSSGLGLNFYALSSYYLGSFLSPIVFFFDLQSMPDAIYLVTIVKFGLTGLSTY 122
Query: 122 FSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKF 181
FSL + +++ L L+TS++LMSF+ SQLEI WLDVFIL+PL++ GL L+ K+
Sbjct: 123 FSLKGIHKNLKEEWALLLATSFSLMSFSTSQLEINNWLDVFILLPLVLLGLHRLLKKQGP 182
Query: 182 LLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASLI 241
+LY+ +L+ LFIQNYYFGYM A+FL W L Q+SW R F++F I S+L+ ++S+
Sbjct: 183 ILYYITLTCLFIQNYYFGYMVAIFLTLWTLVQLSWIDSQRIKRFINFTIVSILSALSSMF 242
Query: 242 LILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFI 301
++LPT DL+THGE T++ +TE SWYLD FAK +GSFDTTK+G+IPMI VGL+P I
Sbjct: 243 MLLPTYLDLKTHGETFTKIVNLKTEDSWYLDFFAKNLVGSFDTTKFGSIPMISVGLVPLI 302
Query: 302 LTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLL 361
L +LFFTLK IK VKL YA+FFTF+I+SFY++ L+LFWQGMH PNMFL+RYAW S +
Sbjct: 303 LALLFFTLKEIKPTVKLSYALFFTFIISSFYLQPLNLFWQGMHAPNMFLYRYAWALSITV 362
Query: 362 IYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSL 421
IY AAE L RL+++ I NF + + ++ F +T + HY FLTD+N LLTLEFL+ Y +
Sbjct: 363 IYLAAETLVRLRQVSIKNFTLIVSFLLICFTSTFIFRDHYEFLTDVNFLLTLEFLIAYFI 422
Query: 422 LLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNR---DIPAM 478
L +A+I+ S+ I++ F +E+ L++ Q+ GI+ EW F SRS+Y DI ++
Sbjct: 423 LFVAMIRYKSSLKWINIVLLFFTFLELGLHSHYQVQGISDEWHFPSRSNYEEKLTDIDSI 482
Query: 479 ESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNL 538
+ + F R E+L QTGNDSMKFNYNGISQFSS+RNR++SS LDKLGF+S GTNL
Sbjct: 483 VKSTKTTTDSFYRIERLLPQTGNDSMKFNYNGISQFSSIRNRASSSVLDKLGFRSDGTNL 542
Query: 539 NLRYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYN 598
NLRY NN+I+ADSLFG++YN++ +K+GF + + LYEN F+L +A ++ +Y
Sbjct: 543 NLRYQNNTIIADSLFGVKYNLATTDPNKFGFTLNQSQSTINLYENSFNLGLALLTEGIYK 602
Query: 599 DVKFNEHTLDNQASFLNQLANVDFDYF---SPILYEKTENTDDLISVTSSSNEDAA-IQY 654
DV F TLDNQ +FLNQL + Y+ S ++ + T + ++V NEDAA +
Sbjct: 603 DVNFTNLTLDNQTNFLNQLTGLSQKYYHTLSDVVSQNTVELSNRMTVNKVDNEDAAKATF 662
Query: 655 QIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNI 714
+ +P NSQVYL+ NL FSN+ QKKV I VN++ FT DNAFSFFN+G +
Sbjct: 663 LVNIPANSQVYLNLPNLTFSNENQKKVVITVNNQSSEFTLDNAFSFFNVGSFTTDVQVQV 722
Query: 715 NVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFF 774
NV FP N+QVSF+ P FYRLD +AI ++E+ V T NKV + +++S+
Sbjct: 723 NVYFPENNQVSFDKPQFYRLDLLAFQQAISILQEKQVVTKTDGNKVTVDFVTDKESSLLL 782
Query: 775 TIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLL 834
T+PYDKGW+A DGK I+I++AQ GFMKVDV G+ + L+F+PNGF G + SF ++ +
Sbjct: 783 TLPYDKGWNATIDGKPIKIQKAQDGFMKVDVSPGQTKLVLTFVPNGFYLGLLISFGAVFV 842
Query: 835 FGIY 838
F Y
Sbjct: 843 FFSY 846
>gi|81097162|ref|ZP_00875469.1| conserved hypothetical protein; possible transmembrane protein
[Streptococcus suis 89/1591]
gi|80976785|gb|EAP40361.1| conserved hypothetical protein; possible transmembrane protein
[Streptococcus suis 89/1591]
Length = 859
Score = 771 bits (1991), Expect = 0.0, Method: Composition-based stats.
Identities = 438/844 (51%), Positives = 590/844 (69%), Gaps = 7/844 (0%)
Query: 2 KLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHG 61
K+F KT Y +SF+IP+ I+ V QGI+W SDT+ L DGFHQYVIF+ LRN LHG
Sbjct: 3 KIFTKTSIYYLLSFLIPLTIISIVLAFQGIWWGSDTTILASDGFHQYVIFNQTLRNTLHG 62
Query: 62 NGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTY 121
+GSLFYTF+SGLGLNFYALSSYYLGSFLSP+V+FFDL +MPDA+YL T++KFGL GLSTY
Sbjct: 63 DGSLFYTFSSGLGLNFYALSSYYLGSFLSPIVFFFDLQSMPDAIYLVTIVKFGLTGLSTY 122
Query: 122 FSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKF 181
FSL + +++ L L+TS++LMSF+ SQLEI WLDVFIL+PL++ GL L+ K+
Sbjct: 123 FSLKGIHKNLKEEWALLLATSFSLMSFSTSQLEINNWLDVFILLPLVLLGLHRLLKKQGP 182
Query: 182 LLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASLI 241
+LY+ +L+ LFIQNYYFGYM A+FL W L Q+SW R F+ F I S+L+ ++S+
Sbjct: 183 ILYYITLTCLFIQNYYFGYMVAIFLTLWTLVQLSWIDSQRIKRFIKFTIVSILSALSSMF 242
Query: 242 LILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFI 301
++LPT DL+THGE T++ +TE SWYLD FAK +GSFDTTK+G+IPMI VGL+P I
Sbjct: 243 MLLPTYLDLKTHGETFTKIVNLKTEDSWYLDFFAKNLVGSFDTTKFGSIPMISVGLVPLI 302
Query: 302 LTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLL 361
L +LFFTLK IK +KL YA+FFTF+I+SFY++ L+LFWQGMH PNMFL+RYAW S +
Sbjct: 303 LALLFFTLKEIKPTIKLSYALFFTFIISSFYLQPLNLFWQGMHAPNMFLYRYAWALSITV 362
Query: 362 IYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSL 421
IY AAE L RL+++ I NF + + ++ F +T + HY FLTD+N LLTLEFL+ Y +
Sbjct: 363 IYLAAETLVRLRQVSIKNFTLIVSFLLICFTSTFIFRDHYEFLTDVNFLLTLEFLIAYFI 422
Query: 422 LLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNR---DIPAM 478
L +A+I+ S+ I++ F +E+ L++ Q+ GI+ EW F SRS+Y DI ++
Sbjct: 423 LFVAMIRYKSSLKWINIVLLFFTFLELGLHSHYQVQGISDEWHFPSRSNYEEKLTDIDSI 482
Query: 479 ESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNL 538
+ + F R E+L QTGNDSMKFNYNGISQFSS+RNR++SS LDKLGF+S GTNL
Sbjct: 483 VKSTKTTTDSFYRIERLLPQTGNDSMKFNYNGISQFSSIRNRASSSALDKLGFRSDGTNL 542
Query: 539 NLRYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYN 598
NLRY NN+I+ADSLFG++YN++ +K+GF + + LYEN F+L +A ++ +Y
Sbjct: 543 NLRYQNNTIIADSLFGVKYNLATTDPNKFGFTLNQSQSTINLYENSFNLGLALLTEGIYK 602
Query: 599 DVKFNEHTLDNQASFLNQLANVDFDYF---SPILYEKTENTDDLISVTSSSNEDAA-IQY 654
DV F TLDNQ +FLNQL + Y+ S ++ + T + ++V NEDAA +
Sbjct: 603 DVNFTNLTLDNQTNFLNQLTGLSQKYYHTLSDVISQNTVELSNRMTVNKVDNEDAAKATF 662
Query: 655 QIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNI 714
+ +P NSQVYL+ NL FSN+ QKKV I VN++ FT DNAFSFFN+G +
Sbjct: 663 LVNIPANSQVYLNLPNLTFSNENQKKVVITVNNQSSEFTLDNAFSFFNVGSFTTDVQVQV 722
Query: 715 NVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFF 774
+V FP N+QVSF+ P FYRLD +AI ++E+ V T NKV + ++ S+
Sbjct: 723 DVYFPENNQVSFDKPQFYRLDLLAFQQAISILQEKQVVTKTDGNKVTVDFVTDKEASLLL 782
Query: 775 TIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLL 834
T+PYDKGW+A DGK I+I++ Q GFMKVDV G+ + L+F+PNGF G + SF ++ +
Sbjct: 783 TLPYDKGWNATIDGKPIKIQKVQEGFMKVDVSPGQTKLVLTFVPNGFYLGLLISFGAVFV 842
Query: 835 FGIY 838
F Y
Sbjct: 843 FFSY 846
>gi|76787776|ref|YP_330720.1| hypothetical protein SAK_2130 [Streptococcus agalactiae A909]
gi|76562833|gb|ABA45417.1| membrane protein, putative [Streptococcus agalactiae A909]
Length = 859
Score = 723 bits (1866), Expect = 0.0, Method: Composition-based stats.
Identities = 422/837 (50%), Positives = 561/837 (67%), Gaps = 9/837 (1%)
Query: 11 YFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFT 70
Y +SF++P II++ + ++ IYW S T+ L DGFHQYVIF+ ALRNILHG+ SLFYTFT
Sbjct: 13 YTISFLLPFIIIVCILFTKNIYWGSPTTILASDGFHQYVIFNQALRNILHGSNSLFYTFT 72
Query: 71 SGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQS 130
SGLGLNFYALSSYYLGSFLSP+VYFF+L NMPDA+YL T+ K GLIGLS + +L K
Sbjct: 73 SGLGLNFYALSSYYLGSFLSPIVYFFNLKNMPDAIYLLTICKIGLIGLSMFVTLCKRHCK 132
Query: 131 IPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSI 190
+ L L +ST Y+LMSF +SQ+EI WLDVFILIPL++ G+ L+ ++K +LYF SL+
Sbjct: 133 VNRVLLLVISTCYSLMSFLISQIEINMWLDVFILIPLVVLGVDQLLWERKPILYFLSLTA 192
Query: 191 LFIQNYYFGYMTALFLIFWYLCQIS--WDFKTRKSSFLDFIITSVLAGMASLILILPTLF 248
LFIQNYYFG+MTA+F +++ QI+ D K FL F S+LAGM S I+ILPT F
Sbjct: 193 LFIQNYYFGFMTAIFTSLYFIVQITRNTDSKVAFKQFLHFTFLSLLAGMTSSIMILPTYF 252
Query: 249 DLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFT 308
DL THGEKLT+V+K TE+SWY+DLFAK IG++DTTK+G+IPMI+VGLLP +L++L+FT
Sbjct: 253 DLTTHGEKLTKVSKMFTENSWYMDLFAKNMIGAYDTTKFGSIPMIYVGLLPLLLSLLYFT 312
Query: 309 LKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEV 368
+K + +L Y F+IASFYI LDLFWQGMH PNMFLHRY+W+ S L+ AAE
Sbjct: 313 IKEVPRRTRLAYGFLLIFVIASFYITPLDLFWQGMHAPNMFLHRYSWVLSVLICLLAAEC 372
Query: 369 LNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIK 428
L L I L ++V+GF+ T K HY +L +LLTL FL Y +L ++ +
Sbjct: 373 LEYLDNISWKKILGVNLILVSGFIITFLFKKHYHYLNLELLLLTLTFLSAYIILTISFVS 432
Query: 429 KFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASR---SSYNRDIPAMESFSTDI 485
K I +F + + F+++EM+LN Q++ + EW F SR + YN I + +
Sbjct: 433 KQIPKLVFYLFLIGFVVLEMTLNTFYQLNSLNDEWVFPSRQGYAKYNHSISKLVRKTERN 492
Query: 486 GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANN 545
+ F RTE+ QTGNDSMK+NYNGISQFSS+RNRS+S LD+LGFKS GTNLNLRY NN
Sbjct: 493 NSTFFRTERWLGQTGNDSMKYNYNGISQFSSIRNRSSSQVLDRLGFKSDGTNLNLRYQNN 552
Query: 546 SILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEH 605
+++ADSLFG++YN+++ P DK+GF Q LYENQF+ +A + VY D F +
Sbjct: 553 TLIADSLFGVKYNLTEYPFDKFGFIRKAQDKQTILYENQFASQLAILTNQVYQDKTFTVN 612
Query: 606 TLDNQASFLNQLANVDFDYFSPILYEKTENTDDL---ISVTSSSNEDAAIQYQIEVPENS 662
TLDNQ + LNQL+ + YF ++ L + V + + I Y I +P+NS
Sbjct: 613 TLDNQTTLLNQLSGLKETYFEHLIPNSVSGQTTLNKQVFVKKNKQGNTEITYNITIPKNS 672
Query: 663 QVYLSFTNLHFSNDKQKKVDILVNSEKKTFTT-DNAFSFFNLGYTKEKKTFNINVSFPGN 721
Q+Y+S ++F+N++ K V I VN+ T DNA+SFFN+G E + FP N
Sbjct: 673 QLYVSMPFINFNNEENKIVQISVNNGPFVPNTLDNAYSFFNIGSFAENSRIKVKFQFPHN 732
Query: 722 SQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKG 781
QVSF P FY L + +A+ I ++ V V T NKV A Y +S+FFTIPYD+G
Sbjct: 733 DQVSFPIPHFYGLKLEAYKKAMTVINKRKVKVRTDHNKVIANYTSPNRSSLFFTIPYDRG 792
Query: 782 WSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGIY 838
W AYQ+ K I+I +AQ GFMK+++PKGKG +TL FIP GF G S T ++LF +Y
Sbjct: 793 WKAYQNNKGIKIFKAQKGFMKINIPKGKGKVTLIFIPYGFKFGVGLSITGIVLFTVY 849
>gi|22538306|ref|NP_689157.1| ABC transporter, permease protein, putative [Streptococcus
agalactiae 2603V/R]
gi|25012166|ref|NP_736561.1| hypothetical protein gbs2131 [Streptococcus agalactiae NEM316]
gi|76797977|ref|ZP_00780236.1| membrane protein, putative [Streptococcus agalactiae 18RS21]
gi|77413656|ref|ZP_00789841.1| putative ABC transporter, permease protein [Streptococcus
agalactiae 515]
gi|22535222|gb|AAN01030.1|AE014290_5 ABC transporter, permease protein, putative [Streptococcus
agalactiae 2603V/R]
gi|24413710|emb|CAD47790.1| Unknown [Streptococcus agalactiae NEM316]
gi|76586657|gb|EAO63156.1| membrane protein, putative [Streptococcus agalactiae 18RS21]
gi|77160311|gb|EAO71437.1| putative ABC transporter, permease protein [Streptococcus
agalactiae 515]
Length = 859
Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats.
Identities = 421/837 (50%), Positives = 562/837 (67%), Gaps = 9/837 (1%)
Query: 11 YFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFT 70
Y +SF++P II++ + ++ IYW S T+ L DGFHQYVIF+ ALRNILHG+ SLFYTFT
Sbjct: 13 YTISFLLPFIIIVCILFTKNIYWGSPTTILASDGFHQYVIFNQALRNILHGSNSLFYTFT 72
Query: 71 SGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQS 130
SGLGLNFYALSSYYLGSFLSP+VYFF+L NMPDA+YL T+ K GLIGLS + +L K
Sbjct: 73 SGLGLNFYALSSYYLGSFLSPIVYFFNLKNMPDAIYLLTICKIGLIGLSMFVTLCKRHCK 132
Query: 131 IPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSI 190
+ L L +ST Y+LMSF++SQ+EI WLDVFILIPL++ G+ L+ ++K +LYF SL+
Sbjct: 133 VNRVLLLVISTCYSLMSFSISQIEINMWLDVFILIPLVVLGVDQLLWERKPILYFLSLTA 192
Query: 191 LFIQNYYFGYMTALFLIFWYLCQIS--WDFKTRKSSFLDFIITSVLAGMASLILILPTLF 248
LFIQNYYFG+MTA+F +++ QI+ D K FL F S+LAGM S I+ILPT F
Sbjct: 193 LFIQNYYFGFMTAIFTSLYFIVQITRNTDSKVAFKQFLHFTFLSLLAGMTSSIMILPTYF 252
Query: 249 DLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFT 308
DL THGEKLT+V+K TE+SWY+DLFAK IG++DTTK+G+IPMI+VGLLP +L++L+FT
Sbjct: 253 DLTTHGEKLTKVSKMFTENSWYMDLFAKNMIGAYDTTKFGSIPMIYVGLLPLLLSLLYFT 312
Query: 309 LKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEV 368
+K + +L Y F+IASFYI LDLFWQGMH PNMFLHRY+W+ S L+ AAE
Sbjct: 313 IKEVPRRTRLAYGFLIIFVIASFYITPLDLFWQGMHAPNMFLHRYSWVLSVLICLLAAEC 372
Query: 369 LNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIK 428
L L I L ++V+GF+ T K HY +L +LLTL FL Y +L ++ +
Sbjct: 373 LEYLDNISWKKILGVNLILVSGFIITFLFKKHYHYLNLELLLLTLTFLSAYIILTISFVS 432
Query: 429 KFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASR---SSYNRDIPAMESFSTDI 485
K I +F + F+++EM+LN Q++ + EW F SR + YN I + +
Sbjct: 433 KQIPKLVFYPFLIGFVVLEMTLNTFYQLNSLNDEWIFPSRQGYAKYNHSISKLVRKTERN 492
Query: 486 GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANN 545
+ F RTE+ QTGNDSMK+NYNGISQFSS+RNRS+S LD+LGFKS GTNLNLRY NN
Sbjct: 493 NSTFFRTERWLGQTGNDSMKYNYNGISQFSSIRNRSSSQVLDRLGFKSDGTNLNLRYQNN 552
Query: 546 SILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEH 605
+++ADSLFG++YN+++ P DK+GF Q LY+NQF+ +A + VY D F +
Sbjct: 553 TLIADSLFGVKYNLTEYPFDKFGFIKKAQDKQTILYKNQFASQLAILTNQVYQDKPFTVN 612
Query: 606 TLDNQASFLNQLANVDFDYFSPILYEKTENTDDL---ISVTSSSNEDAAIQYQIEVPENS 662
TLDNQ + LNQL+ + YF ++ L + V + + I Y I +P+NS
Sbjct: 613 TLDNQTTLLNQLSGLKETYFEHLIPNSVSGQTTLNKQVFVKKNKQGNTEITYNITIPKNS 672
Query: 663 QVYLSFTNLHFSNDKQKKVDILVNSEKKTFTT-DNAFSFFNLGYTKEKKTFNINVSFPGN 721
Q+Y+S ++F+N++ K V I VN+ T DNA+SFFN+G E + FP N
Sbjct: 673 QLYVSMPFINFNNEENKIVQISVNNGPFVPNTLDNAYSFFNIGSFAENSRIKVKFQFPHN 732
Query: 722 SQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKG 781
QVSF P FY L + +A+ I ++ V V T NKV A Y +S+FFTIPYD+G
Sbjct: 733 DQVSFPIPHFYGLKLEAYQKAMTVINKRKVKVRTDHNKVIANYTSPNRSSLFFTIPYDRG 792
Query: 782 WSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGIY 838
W AYQ+ K+I+I +AQ GFMK+++PKGKG +TL FIP GF G S T ++LF +Y
Sbjct: 793 WKAYQNNKEIKIFKAQKGFMKINIPKGKGKVTLIFIPYGFKFGVGLSITGIVLFTVY 849
>gi|77405608|ref|ZP_00782697.1| ABC transporter, permease protein, putative [Streptococcus
agalactiae H36B]
gi|77175752|gb|EAO78532.1| ABC transporter, permease protein, putative [Streptococcus
agalactiae H36B]
Length = 859
Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats.
Identities = 421/837 (50%), Positives = 559/837 (66%), Gaps = 9/837 (1%)
Query: 11 YFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFT 70
Y +SF++P II++ + ++ IYW S T+ L DGFHQYVIF+ ALRNILHG+ SLFYTFT
Sbjct: 13 YTISFLLPFIIIVCILFTKNIYWGSPTTILASDGFHQYVIFNQALRNILHGSNSLFYTFT 72
Query: 71 SGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQS 130
SGLGLNFYALSSYYLGSFLSP+VYFF+L NMPDA+YL T+ K GLIGLS + +L K
Sbjct: 73 SGLGLNFYALSSYYLGSFLSPIVYFFNLKNMPDAIYLLTICKIGLIGLSMFVTLCKRHCK 132
Query: 131 IPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSI 190
+ L L +ST Y+LMSF +SQ+EI WLDVFILIPL++ G+ L+ ++K +LYF SL+
Sbjct: 133 VNRVLLLVISTCYSLMSFLISQIEINMWLDVFILIPLVVLGVDQLLWERKPILYFLSLTA 192
Query: 191 LFIQNYYFGYMTALFLIFWYLCQIS--WDFKTRKSSFLDFIITSVLAGMASLILILPTLF 248
LFIQNYYFG+MTA+F +++ QI+ D K FL F S+LAGM S I+ILPT F
Sbjct: 193 LFIQNYYFGFMTAIFTSLYFIVQITRNTDSKVAFKQFLHFTFLSLLAGMTSSIMILPTYF 252
Query: 249 DLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFT 308
DL THGEKLT+V+K TE+SWY+DLFAK IG++DTTK+G+IPMI+VGLLP +L++L+FT
Sbjct: 253 DLTTHGEKLTKVSKMFTENSWYMDLFAKNMIGAYDTTKFGSIPMIYVGLLPLLLSLLYFT 312
Query: 309 LKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEV 368
+K + +L Y F+IASFYI LDLFWQGMH PNMFLHRY+W+ S L+ AAE
Sbjct: 313 IKEVPRRTRLAYGFLLIFVIASFYITPLDLFWQGMHAPNMFLHRYSWVLSVLICLLAAEC 372
Query: 369 LNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIK 428
L L I L ++V+GF+ T K HY +L +LLTL FL Y +L ++ +
Sbjct: 373 LEYLDNISWKKILGVNLILVSGFIITFLFKKHYHYLNLELLLLTLTFLSAYIILTISFVS 432
Query: 429 KFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASR---SSYNRDIPAMESFSTDI 485
K I +F + F+++EM+LN Q++ + EW F SR + YN I + +
Sbjct: 433 KQIPKLVFYPFLIGFVVLEMTLNTFYQLNSLNDEWVFPSRQGYAKYNHSISKLVRKTERN 492
Query: 486 GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANN 545
+ F RTE+ QTGNDSMK+NYNGISQFSS+RNRS+S LD+LGFKS GTNLNLRY NN
Sbjct: 493 NSTFFRTERWLGQTGNDSMKYNYNGISQFSSIRNRSSSQVLDRLGFKSDGTNLNLRYQNN 552
Query: 546 SILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEH 605
+++ADSLFG++YN+++ P DK+GF Q LYENQF+ +A + VY D F +
Sbjct: 553 TLIADSLFGVKYNLTEYPFDKFGFIRKAQDKQTILYENQFASQLAILTNQVYQDKTFTVN 612
Query: 606 TLDNQASFLNQLANVDFDYFSPILYEKTENTDDL---ISVTSSSNEDAAIQYQIEVPENS 662
TLDNQ + LNQL+ + YF ++ L + V + + I Y I +P+NS
Sbjct: 613 TLDNQTTLLNQLSGLKETYFEHLIPNSVSGQTTLNKQVFVKKNKQGNTEITYNITIPKNS 672
Query: 663 QVYLSFTNLHFSNDKQKKVDILVNSEKKTFTT-DNAFSFFNLGYTKEKKTFNINVSFPGN 721
Q+Y+S ++F+N++ K V I VN+ T DNA+SFFN+G E + FP N
Sbjct: 673 QLYVSMPFINFNNEENKIVQISVNNGPFVPNTLDNAYSFFNIGSFAENSRIKVKFQFPHN 732
Query: 722 SQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKG 781
QVSF P FY L + +A+ I ++ V V T NKV A Y +S+FFTIPYD+G
Sbjct: 733 DQVSFPIPHFYGLKLEAYKKAMTVINKRKVKVRTDHNKVIANYTSPNRSSLFFTIPYDRG 792
Query: 782 WSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGIY 838
W AYQ+ K I+I + Q GFMK+++PKGKG +TL FIP GF G S T ++LF +Y
Sbjct: 793 WKAYQNNKGIKIFKTQKGFMKINIPKGKGKVTLIFIPYGFKFGVGLSITGIVLFTVY 849
>gi|77411789|ref|ZP_00788125.1| ABC transporter, permease protein, putative [Streptococcus
agalactiae CJB111]
gi|77162180|gb|EAO73155.1| ABC transporter, permease protein, putative [Streptococcus
agalactiae CJB111]
Length = 859
Score = 719 bits (1855), Expect = 0.0, Method: Composition-based stats.
Identities = 420/837 (50%), Positives = 561/837 (67%), Gaps = 9/837 (1%)
Query: 11 YFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFT 70
Y +SF++P II++ + ++ IYW S T+ L DGFHQYVIF+ ALRNILHG+ SLFYTFT
Sbjct: 13 YTISFLLPFIIIVCILFTKNIYWGSPTTILASDGFHQYVIFNQALRNILHGSNSLFYTFT 72
Query: 71 SGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQS 130
SGLGLNFYALSSYYLGSFLSP+VYFF+L NMPDA+YL T+ K GLIGLS + +L K
Sbjct: 73 SGLGLNFYALSSYYLGSFLSPIVYFFNLKNMPDAIYLLTICKIGLIGLSMFVTLCKRHCK 132
Query: 131 IPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSI 190
+ L L +ST Y+LMSF++SQ+EI WLDVFILIPL++ G+ L+ ++K +LYF SL+
Sbjct: 133 VNRILLLVISTCYSLMSFSISQIEINMWLDVFILIPLVVLGVDQLLWERKPILYFLSLTA 192
Query: 191 LFIQNYYFGYMTALFLIFWYLCQIS--WDFKTRKSSFLDFIITSVLAGMASLILILPTLF 248
LFIQNYYFG+MTA+F +++ QI+ D FL F S+LAGM S I+ILPT F
Sbjct: 193 LFIQNYYFGFMTAIFTSLYFIVQITRNTDSTVAFKQFLHFTFLSLLAGMTSSIMILPTYF 252
Query: 249 DLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFT 308
DL THGEKLT+V+K TE+SWY+DLFAK IG++DTTK+G+IPMI+VGLLP +L++L+FT
Sbjct: 253 DLTTHGEKLTKVSKMFTENSWYMDLFAKNMIGAYDTTKFGSIPMIYVGLLPLLLSLLYFT 312
Query: 309 LKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEV 368
+K + +L Y F+IASFYI LDLFWQGMH PNMFLHRY+W+ S L+ AAE
Sbjct: 313 IKEVPRRTRLAYGFLLIFVIASFYITPLDLFWQGMHAPNMFLHRYSWVLSVLICLLAAEC 372
Query: 369 LNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIK 428
L L I L ++V+GF+ T K HY +L +LLTL FL Y +L ++ +
Sbjct: 373 LEYLDNISWKKILGVNLILVSGFIITFLFKKHYHYLNLELLLLTLTFLSAYIILTISFVS 432
Query: 429 KFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASR---SSYNRDIPAMESFSTDI 485
K I +F + F+++EM+LN Q++ + EW F SR + YN I + +
Sbjct: 433 KQIPKLVFYPFLIGFVVLEMTLNTFYQLNSLNNEWVFPSRQGYAKYNHSISKLIRKTERN 492
Query: 486 GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANN 545
+ F RTE+ QTGNDSMK+NYNGISQFSS+RNRS+S LD+LGFKS GTNLNLRY NN
Sbjct: 493 SSTFFRTERWLGQTGNDSMKYNYNGISQFSSIRNRSSSQVLDRLGFKSDGTNLNLRYQNN 552
Query: 546 SILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEH 605
+++ADSLFG++YN+++ P DK+GF Q LY+NQF+ +A + VY D F +
Sbjct: 553 TLIADSLFGVKYNLTEYPFDKFGFIRKAQDKQTILYKNQFASQLAILTNQVYQDKPFTVN 612
Query: 606 TLDNQASFLNQLANVD---FDYFSPILYEKTENTDDLISVTSSSNEDAAIQYQIEVPENS 662
TLDNQ + LNQL+ + FD+ P + + V + + I Y I +P+NS
Sbjct: 613 TLDNQTTLLNQLSGLKETYFDHLIPNSVSGQTTLNKQVFVKKNKQGNTEITYNITIPKNS 672
Query: 663 QVYLSFTNLHFSNDKQKKVDILVNSEKKTFTT-DNAFSFFNLGYTKEKKTFNINVSFPGN 721
Q+Y+S ++F+N++ K V I VN+ T DNA+SFFN+G E + FP N
Sbjct: 673 QLYVSMPFINFNNEENKIVQISVNNGPFVPNTLDNAYSFFNIGSFAENSRIKVKFQFPHN 732
Query: 722 SQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKG 781
QVSF P FY L + +A+ I ++ V V T NKV A Y +S+FFTIPYD+G
Sbjct: 733 DQVSFPIPHFYGLKLEAYQKAMTVINKRKVKVRTDHNKVIANYTSPNRSSLFFTIPYDRG 792
Query: 782 WSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGIY 838
W AYQ+ K+I+I +AQ GFMK+++PKGKG +TL FIP GF G S T ++LF +Y
Sbjct: 793 WKAYQNNKEIKIFKAQKGFMKINIPKGKGKVTLIFIPYGFKFGVGLSITGIVLFTVY 849
>gi|77407666|ref|ZP_00784421.1| ABC transporter, permease protein, putative [Streptococcus
agalactiae COH1]
gi|77173665|gb|EAO76779.1| ABC transporter, permease protein, putative [Streptococcus
agalactiae COH1]
Length = 859
Score = 716 bits (1849), Expect = 0.0, Method: Composition-based stats.
Identities = 419/837 (50%), Positives = 559/837 (66%), Gaps = 9/837 (1%)
Query: 11 YFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFT 70
Y +SF++P II++ + ++ IYW S T+ L D FHQYVIF+ ALRNILHG+ SLFYTFT
Sbjct: 13 YTISFLLPFIIIVCILFTKNIYWGSPTTILASDSFHQYVIFNQALRNILHGSNSLFYTFT 72
Query: 71 SGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQS 130
SGLGLNFYALSSYYLGSFLSP+VYFF+L NMPDA+YL T+ K GLIGLS + +L K
Sbjct: 73 SGLGLNFYALSSYYLGSFLSPIVYFFNLKNMPDAIYLLTICKVGLIGLSMFVTLCKRHCK 132
Query: 131 IPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSI 190
+ L L +ST Y+LMSF++SQ+EI WLDVFILIPL++ G+ L+ ++K +L+F SL+
Sbjct: 133 VNRVLLLVISTCYSLMSFSISQIEINMWLDVFILIPLVVLGVDQLLWERKPILHFLSLTA 192
Query: 191 LFIQNYYFGYMTALFLIFWYLCQIS--WDFKTRKSSFLDFIITSVLAGMASLILILPTLF 248
LFIQNYYFG+MT +F +++ QI+ D K FL F S+LAGM S I+ILPT F
Sbjct: 193 LFIQNYYFGFMTTIFTSLYFIVQITRNTDSKVAFKQFLHFTFLSLLAGMTSSIMILPTYF 252
Query: 249 DLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFT 308
DL THGEKLT+V+K TE+SWY+DLFAK IG++DTTK+G+IPMI+VGLLP +L++L+FT
Sbjct: 253 DLTTHGEKLTKVSKMFTENSWYMDLFAKNMIGAYDTTKFGSIPMIYVGLLPLLLSLLYFT 312
Query: 309 LKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEV 368
+K I +L Y F+IASFYI LDLFWQGMH PNMFLHRY+W+ S L+ AAE
Sbjct: 313 IKEIPRRTRLAYGFSLIFVIASFYITPLDLFWQGMHAPNMFLHRYSWVLSVLICLLAAEC 372
Query: 369 LNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIK 428
L L I L ++++GF+ T K HY +L +LLTL FL Y +L ++ +
Sbjct: 373 LEYLDNISWKKILGVNLILISGFIITFLFKKHYHYLNLELLLLTLTFLSAYIILTISFVS 432
Query: 429 KFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASR---SSYNRDIPAMESFSTDI 485
K I +F + F+++EM+LN Q++ + EW F SR + YN I + +
Sbjct: 433 KQIPKLVFYPFLIGFVVLEMTLNTFYQLNSLNDEWVFPSRQGYAKYNHSISKLVRKTERN 492
Query: 486 GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANN 545
+ F RTE+ QTGNDSMK+NYNGISQFSS+RNRS+S LD+LGFKS GTNLNLRY NN
Sbjct: 493 NSTFFRTERWLGQTGNDSMKYNYNGISQFSSIRNRSSSQVLDRLGFKSDGTNLNLRYQNN 552
Query: 546 SILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEH 605
+++ADSLFG++YN+++ P DK+GF Q LYENQF+ +A + VY D F +
Sbjct: 553 TLIADSLFGVKYNLTEYPFDKFGFIRKAQDKQTILYENQFASQLAILTNQVYQDKPFTVN 612
Query: 606 TLDNQASFLNQLANVDFDYFSPILYEKTENTDDL---ISVTSSSNEDAAIQYQIEVPENS 662
TLDNQ + LNQL+ + YF ++ L + V + + I Y I +P+NS
Sbjct: 613 TLDNQTTLLNQLSGLKETYFEHLIPNSVSGQTTLNKQVFVRKNKQGNTEITYNITIPKNS 672
Query: 663 QVYLSFTNLHFSNDKQKKVDILVNSEKKTFTT-DNAFSFFNLGYTKEKKTFNINVSFPGN 721
Q+Y+S ++F+N++ K V I VN+ T DNA+SFFN+G E + FP N
Sbjct: 673 QLYVSMPFINFNNEENKIVQISVNNGPFVPNTLDNAYSFFNIGSFAENSRIKVKFQFPHN 732
Query: 722 SQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKG 781
QVSF P FY L + +A+ I ++ V V T NKV A Y +S+FFTIPYD+G
Sbjct: 733 DQVSFPIPHFYGLKLEAYQKAMTVINKRKVKVRTDHNKVIANYTSPNRSSLFFTIPYDRG 792
Query: 782 WSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGIY 838
W AYQ+ K I+I +AQ GFMK+++PKGKG +TL FIP GF G S T ++LF +Y
Sbjct: 793 WKAYQNNKGIKIFKAQKGFMKINIPKGKGKVTLIFIPYGFKFGVGLSITGIVLFTVY 849
>gi|55821988|ref|YP_140430.1| ABC transporter membrane-spanning protein [Streptococcus
thermophilus LMG 18311]
gi|55823904|ref|YP_142345.1| ABC transporter permease protein [Streptococcus thermophilus
CNRZ1066]
gi|55737973|gb|AAV61615.1| ABC transporter membrane-spanning protein [Streptococcus
thermophilus LMG 18311]
gi|55739889|gb|AAV63530.1| ABC transporter permease protein [Streptococcus thermophilus
CNRZ1066]
Length = 868
Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats.
Identities = 416/848 (49%), Positives = 567/848 (66%), Gaps = 14/848 (1%)
Query: 2 KLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHG 61
K ++ T Y +F +P++IMI V SQ IY S+ + L DGFHQYVIF LRNILHG
Sbjct: 4 KKYYTTLLFYLAAFFLPVLIMIDVLYSQKIYPGSERTILTSDGFHQYVIFATELRNILHG 63
Query: 62 NGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTY 121
+GSLFYTFTSGLGLNFYAL+SYYLGSFLSPL YFF ++ M DA Y TLLKFGL GLS
Sbjct: 64 DGSLFYTFTSGLGLNFYALTSYYLGSFLSPLYYFFTVSQMADAFYYITLLKFGLTGLSGA 123
Query: 122 FSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKF 181
FS LF + L LST ++LMSF SQLEI TWLDVFIL PLII GL +L+ K
Sbjct: 124 FSFKHLFTKVSRSFILCLSTGFSLMSFATSQLEINTWLDVFILAPLIILGLHLLLRFNKR 183
Query: 182 LLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISW--DFKTRKSSFLDFIITSVLAGMAS 239
LYF SL+ LFIQNYYFGYM ++FL + + Q+ +K++ F+DF I S+LAG++S
Sbjct: 184 GLYFLSLTCLFIQNYYFGYMMSIFLTLYTIIQLITITGWKSKILHFIDFGIVSILAGLSS 243
Query: 240 LILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLP 299
I++LPTL DL THGEK T + TES++Y D FAK +G +DTTK+G+IPMI+VGLLP
Sbjct: 244 TIMLLPTLLDLTTHGEKFTAPSSLLTESTYYFDFFAKNLVGVYDTTKFGSIPMIYVGLLP 303
Query: 300 FILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFST 359
IL +LFF K IK ++L Y + F IASF ++ LDLFWQGMH PNMFLHRY+W+ S
Sbjct: 304 LILFLLFFISKEIKLSLRLGYFLLLAFFIASFNLQPLDLFWQGMHAPNMFLHRYSWLLSL 363
Query: 360 LLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVY 419
L++ A E LNR+++ + L+ + +L T +SHYSF+ ++ LL+L FL+ Y
Sbjct: 364 LIVLLAGETLNRIEKFSLQRLLLPFVGLSVAYLLTWIFQSHYSFIEPVSWLLSLAFLLAY 423
Query: 420 SLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAME 479
++L ++ ++ I ++F LF + E+ LN + + EW F +R Y R++ A+
Sbjct: 424 AILFISYFRQQIPRSVFRCFTFLFCIFELGLNTYYVVGALGNEWIFPTREGYLRNMSAIS 483
Query: 480 SFSTDI---GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGT 536
+D F RTE+L+ QTGNDSMKFNYNGISQFSS+RN ++SSTLD+LGFKS GT
Sbjct: 484 KLVSDTKQTNKNFYRTERLEAQTGNDSMKFNYNGISQFSSIRNTASSSTLDRLGFKSEGT 543
Query: 537 NLNLRYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFV 596
NLNLRY NN+++ADSLFGI+YN+S+ ++KYGF I + + LY+N ++ +A + +
Sbjct: 544 NLNLRYQNNTLIADSLFGIKYNLSNFDLNKYGFNYIASEKTVRLYQNDYASQLAILTNGI 603
Query: 597 YNDVKFNEHTLDNQASFLNQLANVDFDYFSPILYEKTENTDDLIS------VTSSSNEDA 650
Y +V F +TLDNQ + +N LA ++ YF + + ++N ++ V++S+N+ A
Sbjct: 604 YTNVDFTVNTLDNQTTLINALAGLNLTYFRRVPSQLSDNDAKTLNQRVAKNVSNSNNDFA 663
Query: 651 AIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKK 710
I YQ+ P +SQ+Y+S N+ +S+D + VN + TDN F FF+LGY + ++
Sbjct: 664 TITYQVIAPPHSQLYVSIPNISWSDDNNHSLSTTVNGVTRNQVTDNTFDFFDLGYFETEE 723
Query: 711 TFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDT 770
IN++FPGN +SF++P+FY LDTQ A+ I E+ V+TSKNKVF Y ++
Sbjct: 724 AITINLNFPGNKAISFDNPSFYALDTQNYKIAMDTINERDTKVTTSKNKVFTDYSSHKNA 783
Query: 771 SIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFT 830
S+FFTIPYDKGW+A + K ++I +AQ GFMKVDVP GKG + L+FIP G G I
Sbjct: 784 SLFFTIPYDKGWTATVNNKNVKIHRAQKGFMKVDVPSGKGKVVLTFIPYGLKIGLI---I 840
Query: 831 SLLLFGIY 838
S L FGI+
Sbjct: 841 SCLAFGIF 848
>gi|139474630|ref|YP_001129346.1| hypothetical protein SpyM51834 [Streptococcus pyogenes str.
Manfredo]
gi|134272877|emb|CAM31159.1| putative membrane protein [Streptococcus pyogenes str. Manfredo]
Length = 858
Score = 665 bits (1715), Expect = 0.0, Method: Composition-based stats.
Identities = 391/834 (46%), Positives = 544/834 (65%), Gaps = 11/834 (1%)
Query: 12 FVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFTS 71
SF+ P+ I+ + LS GIY+NSD + L D FHQYVIF RNI+HG+ S FYTFTS
Sbjct: 12 LASFLFPLSIIFIILLSMGIYYNSDKTILASDAFHQYVIFAQNFRNIMHGSDSFFYTFTS 71
Query: 72 GLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSI 131
GLG+NFYAL YYLGSF SPL++FF+L +MPDA+YL TL+KFGLIGL+ +S ++L+ I
Sbjct: 72 GLGINFYALMCYYLGSFFSPLLFFFNLASMPDAIYLFTLIKFGLIGLAACYSFHRLYPKI 131
Query: 132 PNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSIL 191
L +++S Y+LMSF SQ+E+ +WLDVFIL+PL++ GL LIT+ K Y+ S+S+L
Sbjct: 132 SAFLMISISVFYSLMSFLTSQMELNSWLDVFILLPLVVLGLNKLITENKTRTYYLSISLL 191
Query: 192 FIQNYYFGYMTALFLIFWYL-CQISW-DFKTRKSSFLDFIITSVLAGMASLILILPTLFD 249
FIQNYYFGYM ALF I + L C + DF +F+ F S+ A + S ++ILPT D
Sbjct: 192 FIQNYYFGYMIALFCILYALVCLLRLNDFNKMFIAFVRFTAVSICAALTSALVILPTYLD 251
Query: 250 LQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTL 309
L T+GE L+ V + T ++W+LD+ AK IG +DTTK+ A+PMI+VGL P +L++++FTL
Sbjct: 252 LSTYGENLSPVKQLVTNNAWFLDIPAKLSIGVYDTTKFNALPMIYVGLFPLMLSVIYFTL 311
Query: 310 KSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVL 369
+SI +KL A TF+I SFY++ LDLFWQGMH+PNMFLHRYAW FS +++ A E L
Sbjct: 312 ESIPLKIKLANACLLTFIIISFYLQPLDLFWQGMHSPNMFLHRYAWSFSIVILLLACETL 371
Query: 370 NRLKEI-KIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIK 428
+RLKE+ +I +FLI+ L + Y+FL LL++ L+ Y++ L +
Sbjct: 372 SRLKEVTQIKAGFAFIFLIILTSLPYSF-SQQYNFLPLTLFLLSVFLLLGYTISLFSFRN 430
Query: 429 KFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYN---RDIPAMESFSTDI 485
I + I +F ++E LN Q+ GI KEWGF SR YN +DI + + +
Sbjct: 431 SQIPSTFISAFILIFSLLESGLNTYYQLQGINKEWGFPSRQIYNSQLKDINNLVNSVSKN 490
Query: 486 GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANN 545
F R E+L QTGNDSMKFNY GISQFSSVRNR +SS LD+LGF+S GTNLNLRY NN
Sbjct: 491 SQPFFRMERLLPQTGNDSMKFNYYGISQFSSVRNRLSSSLLDRLGFQSKGTNLNLRYQNN 550
Query: 546 SILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEH 605
+I+ DSL GI+YN+S+ P++K+GF + N LY+N +S P+A ++ VY DV N +
Sbjct: 551 TIIMDSLLGIKYNLSEGPLNKFGFTKLKTSGNTTLYQNHYSSPLAILTRNVYKDVNLNVN 610
Query: 606 TLDNQASFLNQLANVDFDYF----SPILYEKTENTDDLISVTSSSNEDAAIQYQIEVPEN 661
TLDNQ LNQL+ YF + ++ + + + + S + YQI +P++
Sbjct: 611 TLDNQTKLLNQLSGKSLTYFNLQPAQLISDANQFNGQISAQASDYQNSVTLNYQINIPKH 670
Query: 662 SQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGN 721
SQ+Y+S N+ FSN K+V I ++ +TTDNA+SFF+LGY + K + FP N
Sbjct: 671 SQLYVSIPNIIFSNPDAKEVRIQTDNHNFIYTTDNAYSFFDLGYFADAKVATFSFVFPKN 730
Query: 722 SQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKG 781
Q+SF+ P FY L ++ EA+ IK++ V N V Y+ + S+ FT+PYDKG
Sbjct: 731 KQISFKEPHFYSLSIESYLEAMNSIKQKNVHTYAKSNTVITDYNSKTKGSLIFTLPYDKG 790
Query: 782 WSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLF 835
WSA +DGKK+ +K+AQ GF+ V +PKGKG + L+FIPNGF G S ++ +
Sbjct: 791 WSAQKDGKKLPVKKAQGGFLSVTIPKGKGRVILTFIPNGFKLGLSLSCVGIIAY 844
>gi|71904557|ref|YP_281360.1| ABC transporter, permease protein [Streptococcus pyogenes MGAS6180]
gi|94993390|ref|YP_601489.1| ABC transporter, permease protein [Streptococcus pyogenes MGAS2096]
gi|71803652|gb|AAX73005.1| ABC transporter, permease protein [Streptococcus pyogenes MGAS6180]
gi|94546898|gb|ABF36945.1| ABC transporter, permease protein [Streptococcus pyogenes MGAS2096]
Length = 858
Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats.
Identities = 395/834 (47%), Positives = 547/834 (65%), Gaps = 11/834 (1%)
Query: 12 FVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFTS 71
SF+ P+ I+ + LS GIY+NSD + L D FHQYVIF RNI+HG+ S FYTFTS
Sbjct: 12 LASFLFPLSIIFIILLSMGIYYNSDKTILASDAFHQYVIFAQNFRNIMHGSDSFFYTFTS 71
Query: 72 GLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSI 131
GLG+NFYAL YYLGSF SPL++FF+LT+MPDA+YL TL+KFGLIGL+ +S ++L+ I
Sbjct: 72 GLGINFYALMCYYLGSFFSPLLFFFNLTSMPDAIYLFTLIKFGLIGLAACYSFHRLYPKI 131
Query: 132 PNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSIL 191
L +++S Y+LMSF SQ+E+ +WLDVFIL+PL++ GL LIT+ K Y+ S+S+L
Sbjct: 132 NAFLMISISVFYSLMSFLTSQMELNSWLDVFILLPLVVLGLNKLITENKTRTYYLSISLL 191
Query: 192 FIQNYYFGYMTALFLIFWYL-CQISW-DFKTRKSSFLDFIITSVLAGMASLILILPTLFD 249
FIQNYYFGYM ALF I + L C +S DF +F+ F S+ A + S ++ILPT D
Sbjct: 192 FIQNYYFGYMIALFCILYALVCLLSLNDFNKMFIAFVRFTAVSICAALTSALVILPTYLD 251
Query: 250 LQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTL 309
L T+GE L+ V + T ++W+LD+ AK IG +DTTK+ A+PMI+VGL P +L++++FTL
Sbjct: 252 LSTYGENLSPVKQLVTNNAWFLDIPAKLSIGVYDTTKFNALPMIYVGLFPLMLSVIYFTL 311
Query: 310 KSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVL 369
+SI +KL A TF+I SFY++ LDLFWQGMH+PNMFLHRYAW FS +++ A E L
Sbjct: 312 ESIPLKIKLANACLLTFIIISFYLQPLDLFWQGMHSPNMFLHRYAWSFSIVILLLACETL 371
Query: 370 NRLKEI-KIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIK 428
+RLKE+ +I +FLI+ L + Y+FL LL++ L+ Y++ L +
Sbjct: 372 SRLKEVTQIKAGFAFIFLIILTSLPYSF-SQQYNFLPLTLFLLSVFLLLGYTISLFSFRN 430
Query: 429 KFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYN---RDIPAMESFSTDI 485
I + I +F ++E LN Q+ GI KEWGF SR YN +DI + + +
Sbjct: 431 SQIPPTFISAFILIFSLLESGLNTYYQLQGINKEWGFPSRQIYNSQLKDINNLVNSVSKN 490
Query: 486 GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANN 545
F R E+L QTGNDSMKFNY GISQFSSVRNR +SS LD+LGF+S GTNLNLRY NN
Sbjct: 491 SQPFFRMERLLPQTGNDSMKFNYYGISQFSSVRNRLSSSLLDRLGFQSKGTNLNLRYQNN 550
Query: 546 SILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEH 605
+I+ DSL GI+YN+S+ P++K+GF + N LY+N +S P+A ++ VY DV N +
Sbjct: 551 TIIMDSLLGIKYNLSEGPLNKFGFTKLKTSGNTTLYQNHYSSPLAILTRNVYKDVNLNVN 610
Query: 606 TLDNQASFLNQLANVDFDYFS---PILYEKTENTDDLISVTSSSNEDA-AIQYQIEVPEN 661
TLDNQ LNQL+ YF+ L + IS +S +++ + YQI +P++
Sbjct: 611 TLDNQTKLLNQLSGKSLTYFNLQPAQLISGANQFNGQISAQASDYQNSVTLNYQINIPKH 670
Query: 662 SQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGN 721
SQ+Y+S N+ FSN K+V I ++ +TTDNA+SFF+LGY + K + FP N
Sbjct: 671 SQLYVSIPNIIFSNPDAKEVRIQTDNHNFIYTTDNAYSFFDLGYFADAKVATFSFVFPKN 730
Query: 722 SQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKG 781
Q+SF+ P FY L ++ EA+ IK++ V N V Y+ + S+ FT+PYDKG
Sbjct: 731 KQISFKEPHFYSLSIESYLEAMNSIKQKNVHTYAKSNTVITDYNSKTKGSLIFTLPYDKG 790
Query: 782 WSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLF 835
WSA +DGK + +K+AQ GF+ V +PKGKG + L+FIPNGF G S ++ +
Sbjct: 791 WSAQKDGKNLPVKKAQGGFLSVTIPKGKGRVILTFIPNGFKLGLSLSCVGIIAY 844
>gi|24380488|ref|NP_722443.1| conserved hypothetical protein; possible transmembrane protein
[Streptococcus mutans UA159]
gi|24378519|gb|AAN59749.1|AE015036_8 conserved hypothetical protein; possible transmembrane protein
[Streptococcus mutans UA159]
Length = 857
Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats.
Identities = 389/848 (45%), Positives = 543/848 (64%), Gaps = 11/848 (1%)
Query: 1 MKLFFKTYWT----YFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALR 56
MK+F K + Y +SF++P IM V S+ IYW S T+ L DGFHQYVIFD R
Sbjct: 1 MKIFIKKHQQSILYYSLSFLLPSFIMFLVLFSKNIYWGSSTTILASDGFHQYVIFDALFR 60
Query: 57 NILHGNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLI 116
NILHG SLFY+F +GLG N +AL+SYYLGSFL+P YFF++ NM DA YL TL+KFGLI
Sbjct: 61 NILHGTDSLFYSFKAGLGFNIFALTSYYLGSFLTPFTYFFNVKNMADAFYLFTLIKFGLI 120
Query: 117 GLSTYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILI 176
GLS ++SL +++ I L L LSTSYALMSFT SQLE+ WLDVFIL+PLI+ GLQ L+
Sbjct: 121 GLSAFYSLGQIYTKISKSLVLMLSTSYALMSFTSSQLELNNWLDVFILLPLIMLGLQRLV 180
Query: 177 TKKKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAG 236
K+ LYF +L+ LFIQNYYFG+MTA+FL W+ Q+SWD + R DF++ S+ A
Sbjct: 181 EKRGIFLYFLTLTCLFIQNYYFGFMTAIFLTLWFFTQVSWDIRNRMKRLSDFVLVSIFAT 240
Query: 237 MASLILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVG 296
+ S ++LPT DL++HGE LTE + WY D FAK +GS+DTTKYG+IP I++G
Sbjct: 241 LTSAFMLLPTFLDLKSHGEVLTEQISLFSSDIWYFDFFAKSLLGSYDTTKYGSIPTIYIG 300
Query: 297 LLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWI 356
LLP I I FF +KSIK+ VK+ Y + +IASF + LDLFWQGMH+PNMFLHRY+W
Sbjct: 301 LLPLIFAITFFFVKSIKWQVKVAYFLLLAIIIASFIFQPLDLFWQGMHSPNMFLHRYSWA 360
Query: 357 FSTLLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFL 416
FS +++ AAE L R+K+IK+ NF + + G LAT K +Y++LT +N +LT FL
Sbjct: 361 FSLVIVIMAAETLTRIKDIKLKNFYPAFTFLGVGLLATFLFKDYYNYLTQVNFILTTIFL 420
Query: 417 VVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIP 476
V Y ++L + +S + +F E++LN Q++GI +W F SR Y ++
Sbjct: 421 VSYFIILFTFFNQLVSYKVIISFTLIFTSFEIALNTFYQIEGIQTDWNFPSREVYEDNVK 480
Query: 477 AMESFSTDIGN---QFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKS 533
++++ +F RTEK QT ND MKFNYN ISQFSSV+N ++ L+ LG+ S
Sbjct: 481 EIDNYVKKTKKDNLEFFRTEKQIPQTYNDGMKFNYNSISQFSSVKNNLSAQLLNSLGYYS 540
Query: 534 SGTNLNLRYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFAS 593
G + + Y NN+IL DSLF I+YNI++ K+GF + + L LY+N +SLP+A S
Sbjct: 541 QGNHSTISYPNNTILMDSLFSIKYNINNQNPHKFGFHLKQKNNKLQLYKNFYSLPLALMS 600
Query: 594 QFVYNDVKFNEHTLDNQASFLNQLANVDFDYFS--PILYE-KTENTDDLISVTSSSNEDA 650
+Y DVKF+ + LDNQ F+N+L +++ F PI+ + D+ +++ S A
Sbjct: 601 NHIYKDVKFDSYPLDNQQKFVNELTDLNLTLFKEIPIISSVGMQVLDNRVTINGSKGNKA 660
Query: 651 AIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKK 710
+ Y ++ P NSQ+Y+S NL N+K + V I N ++ D ++ FNLG K+ +
Sbjct: 661 QVYYTVKCPANSQLYISLPNLTV-NNKDENVFITTNKHTSSYIIDESYYLFNLGNYKKTQ 719
Query: 711 TFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDT 770
T +SFP N VS++ P Y LD ++I+++K Q V +T KNK+F TY ++ T
Sbjct: 720 TLIFKLSFPKNKTVSYDLPHIYALDLTAYQKSIKQLKSQTVKTTTKKNKIFTTYVAKKRT 779
Query: 771 SIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFT 830
S+ +T+PYDKGW A Q+GK I+I +AQ G MK+DV KG G I ++F+P G G + +
Sbjct: 780 SLIYTLPYDKGWFAKQNGKAIKISKAQNGLMKIDVSKGSGKIIMTFVPQGLYQGILLTCL 839
Query: 831 SLLLFGIY 838
+ LF Y
Sbjct: 840 GIFLFVFY 847
>gi|94991492|ref|YP_599592.1| ABC transporter, permease protein [Streptococcus pyogenes
MGAS10270]
gi|94545000|gb|ABF35048.1| ABC transporter, permease protein [Streptococcus pyogenes
MGAS10270]
Length = 858
Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats.
Identities = 393/834 (47%), Positives = 545/834 (65%), Gaps = 11/834 (1%)
Query: 12 FVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFTS 71
SF+ P+ I+ + LS GIY+NSD + L D FHQYVIF RNI+HG+ S FYTFTS
Sbjct: 12 LASFLFPLSIIFIILLSMGIYYNSDKTILASDAFHQYVIFAQNFRNIMHGSDSFFYTFTS 71
Query: 72 GLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSI 131
GLG+NFYAL YYLGSF SPL++FF+L +MPDA+YL TL+KFGLIGL+ +S ++L+ I
Sbjct: 72 GLGINFYALMCYYLGSFFSPLLFFFNLASMPDAIYLFTLIKFGLIGLAACYSFHRLYPKI 131
Query: 132 PNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSIL 191
L +++S Y+LMSF SQ+E+ +WLDVFIL+PL++ GL LIT+ K Y+ S+S+L
Sbjct: 132 SAFLMISISVFYSLMSFLTSQMELNSWLDVFILLPLVVLGLNKLITENKTRTYYLSISLL 191
Query: 192 FIQNYYFGYMTALFLIFWYL-CQISW-DFKTRKSSFLDFIITSVLAGMASLILILPTLFD 249
FIQNYYFGYM ALF I + L C + DF +F+ F S+ A + S ++ILPT D
Sbjct: 192 FIQNYYFGYMIALFCILYALVCLLRLNDFNKMFIAFVRFTAVSICAALTSALVILPTYLD 251
Query: 250 LQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTL 309
L T+GE L+ V + T ++W+LD+ AK IG +DTTK+ A+PMI+VGL P +L++++FTL
Sbjct: 252 LSTYGENLSPVKQLVTNNAWFLDIPAKLSIGVYDTTKFNALPMIYVGLFPLMLSVIYFTL 311
Query: 310 KSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVL 369
+SI +KL A TF+I SFY++ LDLFWQGMH+PNMFLHRYAW FS +++ A E L
Sbjct: 312 ESIPLKIKLANACLLTFIIISFYLQPLDLFWQGMHSPNMFLHRYAWSFSIVILLLACETL 371
Query: 370 NRLKEI-KIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIK 428
+RLKE+ +I +FLI+ L + Y+FL LL++ L+ Y++ L +
Sbjct: 372 SRLKEVTQIKAGFAFIFLIILTSLPYGF-SQQYNFLPLTLFLLSVFLLLGYTISLFSFRN 430
Query: 429 KFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYN---RDIPAMESFSTDI 485
I + I +F ++E LN Q+ GI KEWGF SR YN +DI + + +
Sbjct: 431 SQIPSTFISAFILIFSLLESGLNTYYQLQGINKEWGFPSRQIYNSQLKDINNLVNSVSKN 490
Query: 486 GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANN 545
F R E+L QTGNDSMKFNY GISQFSSVRNR +SS LD+LGF+S GTNLNLRY NN
Sbjct: 491 SQPFFRMERLLPQTGNDSMKFNYYGISQFSSVRNRLSSSLLDRLGFQSKGTNLNLRYQNN 550
Query: 546 SILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEH 605
+I+ DSL GI+YN+S+ P++K+GF + N LY+N +S P+A ++ VY DV N +
Sbjct: 551 TIIMDSLLGIKYNLSEGPLNKFGFTKLKTSGNTTLYQNHYSSPLAILTRNVYKDVNLNVN 610
Query: 606 TLDNQASFLNQLANVDFDYFS---PILYEKTENTDDLISVTSSSNEDA-AIQYQIEVPEN 661
TLDNQ LNQL+ YF+ L + IS +S +++ + YQI +P++
Sbjct: 611 TLDNQTKLLNQLSGKSLTYFNLQPAQLISGANQFNGQISAQASDYQNSVTLNYQINIPKH 670
Query: 662 SQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGN 721
SQ+Y+S N+ FSN K+V I ++ +TTDNA+SFF+LGY + K + FP N
Sbjct: 671 SQLYVSIPNIIFSNPDAKEVRIQTDNHNFIYTTDNAYSFFDLGYFADAKVATFSFVFPKN 730
Query: 722 SQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKG 781
Q+SF+ P FY L ++ EA+ IK++ V N V Y+ + S+ FT+PYDKG
Sbjct: 731 KQISFKEPHFYSLSIESYLEAMNSIKQKNVHTYAKSNTVITDYNSKTKGSLIFTLPYDKG 790
Query: 782 WSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLF 835
WSA +DGK + +K+AQ GF+ V +PKGKG + L+FIPNGF G S ++ +
Sbjct: 791 WSAQKDGKNLPVKKAQGGFLSVTIPKGKGRVILTFIPNGFKLGLSLSCVGIIAY 844
>gi|19747042|ref|NP_608178.1| hypothetical protein spyM18_2250 [Streptococcus pyogenes MGAS8232]
gi|19749302|gb|AAL98677.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
Length = 858
Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats.
Identities = 393/834 (47%), Positives = 545/834 (65%), Gaps = 11/834 (1%)
Query: 12 FVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFTS 71
SF+ P+ I+ + LS GIY+NSD + L D FHQYVIF RNI+HG+ S FYTFTS
Sbjct: 12 LASFLFPLSIIFIILLSMGIYYNSDKTILASDAFHQYVIFAQNFRNIMHGSDSFFYTFTS 71
Query: 72 GLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSI 131
GLG+NFYAL YYLGSF SPL++FF+L +MPDA+YL TL+KFGLIGL+ +S ++L+ I
Sbjct: 72 GLGINFYALMCYYLGSFFSPLLFFFNLASMPDAIYLFTLIKFGLIGLAACYSFHRLYPKI 131
Query: 132 PNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSIL 191
L +++S Y+LMSF SQ+E+ +WLDVFIL+PL++ GL LIT+ K Y+ S+S+L
Sbjct: 132 SAFLMISISVFYSLMSFLTSQMELNSWLDVFILLPLVVLGLNKLITENKTRTYYLSISLL 191
Query: 192 FIQNYYFGYMTALFLIFWYL-CQISW-DFKTRKSSFLDFIITSVLAGMASLILILPTLFD 249
FIQNYYFGYM ALF I + L C + DF +F+ F S+ A + S ++ILPT D
Sbjct: 192 FIQNYYFGYMIALFCILYALVCLLRLNDFNKMFIAFVRFTAVSICAALTSALVILPTYLD 251
Query: 250 LQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTL 309
L T+GE L+ V + T ++W+LD+ AK IG +DTTK+ A+PMI+VGL P +L++++FTL
Sbjct: 252 LSTYGENLSPVKQLVTNNAWFLDIPAKLSIGVYDTTKFNALPMIYVGLFPLMLSVIYFTL 311
Query: 310 KSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVL 369
+SI +KL A TF+I SFY++ LDLFWQGMH+PNMFLHRYAW FS +++ A E L
Sbjct: 312 ESIPLKIKLANACLLTFIIISFYLQPLDLFWQGMHSPNMFLHRYAWSFSIVILLLACETL 371
Query: 370 NRLKEI-KIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIK 428
+RLKE+ +I +FLI+ L + Y+FL LL++ L+ Y++ L +
Sbjct: 372 SRLKEVTQIKAGFAFIFLIILTSLPYSF-SQQYNFLPLTLFLLSVFLLLGYTISLFSFRN 430
Query: 429 KFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYN---RDIPAMESFSTDI 485
I + I +F ++E LN Q+ GI KEWGF SR YN +DI + + +
Sbjct: 431 SQIPSTFISAFILIFSLLESGLNTYYQLQGINKEWGFPSRQIYNSQLKDINNLVNSVSKN 490
Query: 486 GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANN 545
F R E+L QTGNDSMKFNY GISQFSSVRNR +SS LD+LGF+S GTNLNLRY NN
Sbjct: 491 SQPFFRMERLLPQTGNDSMKFNYYGISQFSSVRNRLSSSLLDRLGFQSKGTNLNLRYQNN 550
Query: 546 SILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEH 605
+I+ DSL GI+YN+S+ P++K+GF + N LY+N +S P+A ++ VY DV N +
Sbjct: 551 TIIMDSLLGIKYNLSEGPLNKFGFTKLKTSGNTTLYQNHYSSPLAILTRNVYKDVNLNVN 610
Query: 606 TLDNQASFLNQLANVDFDYFS---PILYEKTENTDDLISVTSSSNEDA-AIQYQIEVPEN 661
TLDNQ LNQL+ YF+ L + IS +S +++ + YQI +P++
Sbjct: 611 TLDNQTKLLNQLSGKSLTYFNLQPAQLISGANQFNGQISAQASDYQNSVTLNYQINIPKH 670
Query: 662 SQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGN 721
SQ+Y+S N+ FSN K+V I ++ +TTDNA+SFF+LGY + K + FP N
Sbjct: 671 SQLYVSIPNIIFSNPDAKEVRIQTDNHNFIYTTDNAYSFFDLGYFADAKVATFSFVFPKN 730
Query: 722 SQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKG 781
Q+SF+ P FY L ++ EA+ IK++ V N V Y+ + S+ FT+PYDKG
Sbjct: 731 KQISFKEPHFYSLSIESYLEAMNSIKQKNVHTYAKSNTVITDYNSKTKGSLIFTLPYDKG 790
Query: 782 WSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLF 835
WSA +DGK + +K+AQ GF+ V +PKGKG + L+FIPNGF G S ++ +
Sbjct: 791 WSAQKDGKNLPVKKAQGGFLSVTIPKGKGRVILTFIPNGFKLGLSLSCVGIIAY 844
>gi|94995371|ref|YP_603469.1| ABC transporter, permease protein [Streptococcus pyogenes
MGAS10750]
gi|94548879|gb|ABF38925.1| ABC transporter, permease protein [Streptococcus pyogenes
MGAS10750]
Length = 858
Score = 662 bits (1707), Expect = 0.0, Method: Composition-based stats.
Identities = 394/834 (47%), Positives = 546/834 (65%), Gaps = 11/834 (1%)
Query: 12 FVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFTS 71
SF+ P+ I+ + LS GIY+NSD + L D FHQYVIF RNI+HG+ S FYTFTS
Sbjct: 12 LASFLFPLSIIFIILLSMGIYYNSDKTILASDAFHQYVIFAQNFRNIMHGSDSFFYTFTS 71
Query: 72 GLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSI 131
GLG+NFYAL YYLGSF SPL++FF+LT+MPDA+YL TL+KFGLIGL+ +S ++L+ I
Sbjct: 72 GLGINFYALMCYYLGSFFSPLLFFFNLTSMPDAIYLFTLIKFGLIGLAACYSFHRLYPKI 131
Query: 132 PNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSIL 191
L +++S Y+LMSF SQ+E+ +WLDVFIL+PL++ GL LIT+ K Y+ S+S+L
Sbjct: 132 SAFLMISISVFYSLMSFLTSQMELNSWLDVFILLPLVVLGLNKLITENKTRTYYLSISLL 191
Query: 192 FIQNYYFGYMTALFLIFWYL-CQISW-DFKTRKSSFLDFIITSVLAGMASLILILPTLFD 249
FIQNYYFGYM ALF I + L C +S DF +F+ F S+ A + S ++ILPT D
Sbjct: 192 FIQNYYFGYMIALFCILYALVCLLSLNDFNKMFIAFVRFTAVSICAALTSALVILPTYLD 251
Query: 250 LQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTL 309
L T+GE L+ V + T ++W+LD+ AK IG +DTTK+ A+PMI+VGL P +L++++FTL
Sbjct: 252 LSTYGENLSPVKQLVTNNAWFLDIPAKLSIGVYDTTKFNALPMIYVGLFPLMLSVIYFTL 311
Query: 310 KSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVL 369
+SI +KL A TF+I SFY++ LDLFWQGMH+PNMFLHRYAW FS +++ A E L
Sbjct: 312 ESIPLKIKLANACLLTFIIISFYLQPLDLFWQGMHSPNMFLHRYAWSFSIVILLLACETL 371
Query: 370 NRLKEI-KIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIK 428
+RL E+ +I +FLI+ L + Y+FL LL++ L+ Y++ L +
Sbjct: 372 SRLTEVTQIKAGFAFIFLIILTSLPYSF-SQQYNFLPLTLFLLSVFLLLGYTISLFSFRN 430
Query: 429 KFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYN---RDIPAMESFSTDI 485
I + I +F ++E LN Q+ GI KEWGF SR YN +DI + + +
Sbjct: 431 SQIPSTFISAFILIFSLLESGLNTYYQLQGINKEWGFPSRQIYNSQLKDINNLVNSVSKN 490
Query: 486 GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANN 545
F R E+L QTGNDSMKFNY GISQFSSVRNR +SS LD+LGF+S GTNLNLRY NN
Sbjct: 491 SQPFFRMERLLPQTGNDSMKFNYYGISQFSSVRNRLSSSLLDRLGFQSKGTNLNLRYQNN 550
Query: 546 SILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEH 605
+I+ DSL GI+YN+S+ P++K+GF + N LY+N +S P+A ++ VY DV N +
Sbjct: 551 TIIMDSLLGIKYNLSEGPLNKFGFTKLKTSGNTTLYQNHYSSPLAILTRNVYKDVNLNVN 610
Query: 606 TLDNQASFLNQLANVDFDYFS---PILYEKTENTDDLISVTSSSNEDA-AIQYQIEVPEN 661
TLDNQ LNQL+ YF+ L + IS +S +++ + YQI +P++
Sbjct: 611 TLDNQTKLLNQLSGKSLTYFNLQPAQLISGANQFNGQISAQASDYQNSVTLNYQINIPKH 670
Query: 662 SQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGN 721
SQ+Y+S N+ FSN K+V I ++ +TTDNA+SFF+LGY + K + FP N
Sbjct: 671 SQLYVSIPNIIFSNPDAKEVRIQTDNHNFIYTTDNAYSFFDLGYFADAKVATFSFVFPKN 730
Query: 722 SQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKG 781
Q+SF+ P FY L ++ EA+ IK++ V N V Y+ + S+ FT+PYDKG
Sbjct: 731 KQISFKEPHFYSLSIESYLEAMNSIKQKNVHTYAKSNTVITDYNSKTKGSLIFTLPYDKG 790
Query: 782 WSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLF 835
WSA +DGK + +K+AQ GF+ V +PKGKG + L+FIPNGF G S ++ +
Sbjct: 791 WSAQKDGKNLPVKKAQGGFLSVTIPKGKGRVILTFIPNGFKLGLSLSCVGIIAY 844
>gi|15675943|ref|NP_270117.1| hypothetical protein SPy_2211 [Streptococcus pyogenes M1 GAS]
gi|71911675|ref|YP_283225.1| ABC transporter, permease protein [Streptococcus pyogenes MGAS5005]
gi|94989503|ref|YP_597604.1| ABC transporter, permease protein [Streptococcus pyogenes MGAS9429]
gi|13623184|gb|AAK34838.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|71854457|gb|AAZ52480.1| ABC transporter, permease protein [Streptococcus pyogenes MGAS5005]
gi|94543011|gb|ABF33060.1| ABC transporter, permease protein [Streptococcus pyogenes MGAS9429]
Length = 858
Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats.
Identities = 393/834 (47%), Positives = 545/834 (65%), Gaps = 11/834 (1%)
Query: 12 FVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFTS 71
SF+ P+ I+ + LS GIY+NSD + L D FHQYVIF RNI+HG+ S FYTFTS
Sbjct: 12 LASFLFPLSIIFIILLSMGIYYNSDKTILASDAFHQYVIFAQNFRNIMHGSDSFFYTFTS 71
Query: 72 GLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSI 131
GLG+NFYAL YYLGSF SPL++FF+LT+MPDA+YL TL+KFGLIGL+ +S ++L+ I
Sbjct: 72 GLGINFYALMCYYLGSFFSPLLFFFNLTSMPDAIYLFTLIKFGLIGLAACYSFHRLYPKI 131
Query: 132 PNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSIL 191
L +++S Y+LMSF SQ+E+ +WLDVFIL+PL+I GL LIT+ K Y+ S+S+L
Sbjct: 132 SAFLMISISVFYSLMSFLTSQMELNSWLDVFILLPLVILGLNKLITENKTRTYYLSISLL 191
Query: 192 FIQNYYFGYMTALFLIFWYL-CQISW-DFKTRKSSFLDFIITSVLAGMASLILILPTLFD 249
FIQNYYFGYM ALF I + L C + DF +F+ F S+ A + S ++ILPT D
Sbjct: 192 FIQNYYFGYMIALFCILYALVCLLRLNDFNKMFIAFVRFTAVSICAALTSALVILPTYLD 251
Query: 250 LQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTL 309
L T+GE L+ + + T ++W+LD+ AK IG +DTTK+ A+PMI+VGL P +L++++FTL
Sbjct: 252 LSTYGENLSPIKQLVTNNAWFLDIPAKLSIGVYDTTKFNALPMIYVGLFPLMLSVIYFTL 311
Query: 310 KSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVL 369
+SI +KL A TF+I SFY++ LDLFWQGMH+PNMFLHRYAW FS +++ A E L
Sbjct: 312 ESIPLKIKLANACLLTFIIISFYLQPLDLFWQGMHSPNMFLHRYAWSFSIVILLLACETL 371
Query: 370 NRLKEI-KIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIK 428
+RLKE+ +I +FLI+ L + Y+FL LL++ L+ Y++ L +
Sbjct: 372 SRLKEVTQIKAGFAFIFLIILTSLPYSF-SQQYNFLPLTLFLLSVFLLLGYTISLFSFRN 430
Query: 429 KFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYN---RDIPAMESFSTDI 485
I + I +F ++E LN Q+ GI KEWGF SR YN +DI + + +
Sbjct: 431 SQIPSTFISAFILIFSLLESGLNTYYQLQGINKEWGFPSRQIYNSQLKDINNLVNSVSKN 490
Query: 486 GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANN 545
F R E+L QTGNDSMKFNY GISQFSSVRNR +SS LD+LGF+S GTNLNLRY NN
Sbjct: 491 SQPFFRMERLLPQTGNDSMKFNYYGISQFSSVRNRLSSSLLDRLGFQSKGTNLNLRYQNN 550
Query: 546 SILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEH 605
+I+ DSL GI+YN+S+ P +K+GF + N LY+N +S P+A ++ VY DV N +
Sbjct: 551 TIIMDSLLGIKYNLSEGPPNKFGFTKLKTSGNTTLYQNHYSSPLAILTRNVYKDVNLNVN 610
Query: 606 TLDNQASFLNQLANVDFDYFS---PILYEKTENTDDLISVTSSSNEDA-AIQYQIEVPEN 661
TLDNQ LNQL+ YF+ L + IS +S +++ + YQI +P++
Sbjct: 611 TLDNQTKLLNQLSGKSLTYFNLQPAQLISGANQFNGQISAQASDYQNSVTLNYQINIPKH 670
Query: 662 SQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGN 721
SQ+Y+S N+ FSN K++ I ++ +TTDNA+SFF+LGY + K + FP N
Sbjct: 671 SQLYVSIPNIIFSNPDAKEMRIQTDNHNFIYTTDNAYSFFDLGYFADAKVATFSFVFPKN 730
Query: 722 SQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKG 781
Q+SF+ P FY L ++ EA+ IK++ V N V Y+ + S+ FT+PYDKG
Sbjct: 731 KQISFKEPHFYSLSIESYLEAMNSIKQKNVHTYAKSNTVITDYNSKTKGSLIFTLPYDKG 790
Query: 782 WSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLF 835
WSA +DGK + +K+AQ GF+ V +PKGKG + L+FIPNGF G S ++ +
Sbjct: 791 WSAQKDGKNLPVKKAQGGFLSVTIPKGKGRVILTFIPNGFKLGLSLSCVGIIAY 844
>gi|50915226|ref|YP_061198.1| ABC transporter, permease protein [Streptococcus pyogenes
MGAS10394]
gi|50904300|gb|AAT88015.1| ABC transporter, permease protein [Streptococcus pyogenes
MGAS10394]
Length = 858
Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats.
Identities = 392/834 (47%), Positives = 545/834 (65%), Gaps = 11/834 (1%)
Query: 12 FVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFTS 71
SF+ P+ I+ + LS GIY+NSD + L D FHQYVIF RNI+HG+ S FYTFTS
Sbjct: 12 LASFLFPLSIIFIILLSMGIYYNSDKTILASDAFHQYVIFAQNFRNIMHGSDSFFYTFTS 71
Query: 72 GLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSI 131
GLG+NFYAL YYLGSF SPL++FF+L +MPDA+YL TL+KFGLIGL+ +S ++L+ I
Sbjct: 72 GLGINFYALMCYYLGSFFSPLLFFFNLASMPDAIYLFTLIKFGLIGLAACYSFHRLYPKI 131
Query: 132 PNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSIL 191
L +++S Y+LMSF SQ+E+ +WLDVFIL+PL++ GL LIT+ K Y+ S+S+L
Sbjct: 132 SAFLMISISVFYSLMSFLTSQMELNSWLDVFILLPLVVLGLNKLITENKTRTYYLSISLL 191
Query: 192 FIQNYYFGYMTALFLIFWYL-CQISW-DFKTRKSSFLDFIITSVLAGMASLILILPTLFD 249
FIQNYYFGYM ALF I + L C + DF +F+ F S+ A + S ++ILPT D
Sbjct: 192 FIQNYYFGYMIALFCILYTLVCLLRLNDFNKMFIAFVRFTAVSICAALTSALVILPTYLD 251
Query: 250 LQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTL 309
L T+GE L+ V + T ++W+LD+ AK IG +DTTK+ A+PMI+VGL P +L++++FTL
Sbjct: 252 LSTYGENLSPVKQLVTNNAWFLDIPAKLSIGVYDTTKFNALPMIYVGLFPLMLSVIYFTL 311
Query: 310 KSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVL 369
+SI +KL A TF+I SFY++ LDLFWQGMH+PNMFLHRYAW FS +++ A E L
Sbjct: 312 ESIPLKIKLANACLLTFIIISFYLQPLDLFWQGMHSPNMFLHRYAWSFSIVILLLACETL 371
Query: 370 NRLKEI-KIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIK 428
+RLKE+ +I +FLI+ L + Y+FL LL++ L+ Y++ L +
Sbjct: 372 SRLKEVTQIKAGFAFIFLIILTSLPYSF-SQQYNFLPLTLFLLSVFLLLGYTISLFSFRN 430
Query: 429 KFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYN---RDIPAMESFSTDI 485
I + I +F ++E LN Q+ GI KEWGF SR YN +DI + + +
Sbjct: 431 SQIPSTFISAFILIFSLLESGLNTYYQLQGINKEWGFPSRQIYNSQLKDINNLVNSVSKN 490
Query: 486 GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANN 545
F R E+L QTGNDSMKFNY GISQFSSVRNR +SS LD+LGF+S GTNLNLRY NN
Sbjct: 491 SQPFFRMERLLPQTGNDSMKFNYYGISQFSSVRNRLSSSLLDRLGFQSKGTNLNLRYQNN 550
Query: 546 SILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEH 605
+I+ DSL GI+YN+S+ P++K+GF + N LY+N +S P+A ++ VY DV N +
Sbjct: 551 TIIMDSLLGIKYNLSEGPLNKFGFTKLKTSGNTTLYQNHYSSPLAILTRNVYKDVNLNVN 610
Query: 606 TLDNQASFLNQLANVDFDYFS---PILYEKTENTDDLISVTSSSNEDA-AIQYQIEVPEN 661
TLDNQ LNQL+ YF+ L + IS +S +++ + YQI +P++
Sbjct: 611 TLDNQTKLLNQLSGKSLTYFNLQPAQLISGANQFNGQISAQASDYQNSVTLNYQINIPKH 670
Query: 662 SQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGN 721
SQ+Y+S N+ FSN K+V I ++ +TTDNA+SFF+LGY + K + FP +
Sbjct: 671 SQLYVSIPNIIFSNPDAKEVRIQTDNHNFIYTTDNAYSFFDLGYFADAKVATFSFVFPKD 730
Query: 722 SQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKG 781
Q+SF+ P FY L ++ EA+ IK++ V N V Y+ + S+ FT+PYDKG
Sbjct: 731 KQISFKEPHFYSLSIESYLEAMNSIKQKNVHTYAKSNTVITDYNSKTKGSLIFTLPYDKG 790
Query: 782 WSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLF 835
WSA +DGK + +K+AQ GF+ V +PKGKG + L+FIPNGF G S ++ +
Sbjct: 791 WSAQKDGKNLPVKKAQGGFLSVTIPKGKGRVILTFIPNGFKLGLSLSCVGIIAY 844
>gi|21911397|ref|NP_665665.1| putative ABC transporter, permease protein [Streptococcus pyogenes
MGAS315]
gi|28896769|ref|NP_803119.1| hypothetical protein SPs1857 [Streptococcus pyogenes SSI-1]
gi|21905613|gb|AAM80468.1| putative ABC transporter, permease protein [Streptococcus pyogenes
MGAS315]
gi|28812023|dbj|BAC64952.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
Length = 858
Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats.
Identities = 392/834 (47%), Positives = 546/834 (65%), Gaps = 11/834 (1%)
Query: 12 FVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFTS 71
SF+ P+ I+ + LS GIY+NSD + L D FHQYVIF RNI+HG+ S FYTFTS
Sbjct: 12 LASFLFPLSIIFIILLSMGIYYNSDKTILASDAFHQYVIFAQNFRNIMHGSDSFFYTFTS 71
Query: 72 GLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSI 131
GLG+NFYAL YYLGSF SPL++FF+L +MPDA+YL TL+KFGLIGL+ +S ++L+ I
Sbjct: 72 GLGINFYALMCYYLGSFFSPLLFFFNLASMPDAIYLFTLIKFGLIGLAACYSFHRLYPKI 131
Query: 132 PNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSIL 191
L +++S Y+LMSF SQ+E+ +WLDVFIL+PL++ GL LIT+ K Y+ S+S+L
Sbjct: 132 SAFLMISISVFYSLMSFLTSQMELNSWLDVFILLPLVVLGLNKLITENKTRTYYLSISLL 191
Query: 192 FIQNYYFGYMTALFLIFWYL-CQISW-DFKTRKSSFLDFIITSVLAGMASLILILPTLFD 249
FIQNYYFGYM ALF I + L C +S DF +F+ F S+ A + S ++ILPT D
Sbjct: 192 FIQNYYFGYMIALFCILYALVCLLSLNDFNKMFIAFVRFTAVSICAALTSALVILPTYLD 251
Query: 250 LQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTL 309
L T+GE L+ V + T ++W+LD+ AK IG +DTTK+ A+PMI+VGL P +L++++FTL
Sbjct: 252 LSTYGENLSPVKQLVTNNAWFLDIPAKLSIGVYDTTKFNALPMIYVGLFPLMLSVIYFTL 311
Query: 310 KSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVL 369
+SI +KL A TF+I SFY++ LDLFWQGMH+PNMFLHRYAW FS +++ A E L
Sbjct: 312 ESIPLKIKLANACLLTFIIISFYLQPLDLFWQGMHSPNMFLHRYAWSFSIVILLLACETL 371
Query: 370 NRLKEI-KIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIK 428
+RLKE+ +I +FLI+ L + Y+FL LL++ L+ Y++ L +
Sbjct: 372 SRLKEVTQIKAGFAFIFLIILTSLPYSF-SQQYNFLPLTLFLLSVFLLLGYTISLFSFRN 430
Query: 429 KFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYN---RDIPAMESFSTDI 485
I + I +F ++E LN Q+ GI KEWGF SR YN +DI + + +
Sbjct: 431 SQIPSTFISAFILIFSLLESGLNTYYQLQGINKEWGFPSRQIYNSQLKDINNLVNSVSKN 490
Query: 486 GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANN 545
F R E+L QTGNDSMKFNY GISQFSSVRNR +SS LD+LGF+S GTNLNLRY NN
Sbjct: 491 SQPFFRMERLLPQTGNDSMKFNYYGISQFSSVRNRLSSSLLDRLGFQSKGTNLNLRYQNN 550
Query: 546 SILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEH 605
+I+ DSL GI+YN+S+ P++K+GF + N LY+N +S P+A ++ VY DV N +
Sbjct: 551 TIIMDSLLGIKYNLSEGPLNKFGFTKLKTSGNTTLYQNHYSSPLAILTRNVYKDVNLNVN 610
Query: 606 TLDNQASFLNQLANVDFDYFS---PILYEKTENTDDLISVTSSSNEDA-AIQYQIEVPEN 661
TLDNQ LNQL+ YF+ L + IS +S +++ + YQI +P++
Sbjct: 611 TLDNQTKLLNQLSGKSLTYFNLQPAQLISGANQFNGQISAQASDYQNSVTLNYQINIPKH 670
Query: 662 SQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGN 721
SQ+Y+S N+ FSN K+V I ++ +TTDNA+SFF+LGY + K + FP +
Sbjct: 671 SQLYVSIPNIIFSNPDAKEVRIQTDNHNFIYTTDNAYSFFDLGYFADAKVATFSFVFPKD 730
Query: 722 SQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKG 781
Q+SF+ P FY L ++ EA+ IK++ V N V Y+ + S+ FT+PYDKG
Sbjct: 731 KQISFKEPHFYSLSIESYLEAMNSIKQKNVHTYAKSNTVITDYNSKTKGSLIFTLPYDKG 790
Query: 782 WSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLF 835
WSA ++GK + +K+AQ GF+ V +PKGKG + L+FIPNGF G S ++ +
Sbjct: 791 WSAQKNGKNLPVKKAQGGFLSVTIPKGKGRVILTFIPNGFKLGLSLSCVGIIAY 844
>gi|15672817|ref|NP_266991.1| hypothetical protein L48341 [Lactococcus lactis subsp. lactis
Il1403]
gi|12723760|gb|AAK04933.1|AE006317_2 HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis Il1403]
Length = 883
Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats.
Identities = 381/872 (43%), Positives = 540/872 (61%), Gaps = 36/872 (4%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
MK K W SF IP+++M+ V GIYW S S L GD +HQYV RNILH
Sbjct: 1 MKFIKKNKWALLASFFIPLLLMVIVLAMTGIYWGSSRSILAGDAYHQYVAIHSLYRNILH 60
Query: 61 GNGS--LFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGL 118
GS YTFTSGLGLN YA S+YY+GSFL PL +FFD+ +MPDA+YL T+LKFGLIGL
Sbjct: 61 SGGSSGFLYTFTSGLGLNLYAFSAYYMGSFLMPLTFFFDVKSMPDALYLLTILKFGLIGL 120
Query: 119 STYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITK 178
S + S ++Q + + L++ST++ALMSF SQLEI WLDVFIL+PLII GL L+ +
Sbjct: 121 SAFVSFKNMYQKLSKLIVLSISTAFALMSFLTSQLEITMWLDVFILLPLIIWGLHRLMDE 180
Query: 179 KKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMA 238
+K LYF SL ILFIQNYYFG+M A+FL+ ++L +++++ K + LDF+++S LAG++
Sbjct: 181 RKRWLYFVSLLILFIQNYYFGFMVAIFLVLYFLARMTYE-KWSWTKVLDFVVSSALAGLS 239
Query: 239 SLILILPTLFDLQTH-GEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGL 297
SLI++LP DL++H + L+ ++ TE+S DLFAK F+G++DTT++ AIPMI+VG+
Sbjct: 240 SLIMLLPMYLDLKSHNSDALSTLSGVFTENSHLFDLFAKNFVGTYDTTQFNAIPMIYVGM 299
Query: 298 LPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIF 357
+P L ILFF KSI+ K + F +ASFY++ LDL WQGMH+PNMFLHRYA++F
Sbjct: 300 MPLALAILFFFTKSIRLRSKFAFLGIIAFFVASFYLQALDLLWQGMHSPNMFLHRYAFLF 359
Query: 358 STLLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLV 417
S LL+ A E L+R +EIK W+ L ++TGFLAT+ HY ++ ++LT F +
Sbjct: 360 SLLLVLMALETLSRWEEIKTWHILTISLFLITGFLATLIF-GHYKYVMTSQVMLTFLFGL 418
Query: 418 VYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPA 477
Y +L + ++K+IS +LF I++ +F+ VE +NA Q+ GI KEW FASR YN + +
Sbjct: 419 AYLILSINSVRKWISAHLFVIILFVFMTVEAGVNALYQVQGIQKEWNFASRDYYNTQVNS 478
Query: 478 MESFSTDI----GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKS 533
+E + + G+ F R + T ND MK+N+N +SQFSSVRN +ASS + +LGF +
Sbjct: 479 IEPIANKVNELTGSGFARMDNTVPDTANDGMKYNFNALSQFSSVRNSNASSIMRQLGFHT 538
Query: 534 SGTNLNLRYANNSILADSLFGIQYNISDNPIDKYGFKDIYQK-DNLALYENQFSLPIAFA 592
T LNLRY N++L DS+FGI+YNIS K+GF + NL+ N L +
Sbjct: 539 DSTYLNLRYPGNTLLMDSIFGIKYNISQAQPPKFGFSPVSNALSNLSKNSNAMGLGVFVP 598
Query: 593 SQFVYNDVKFNEHT-----LDNQASFLNQLANVDFDYFSPILYEKTENTDDLI----SVT 643
+ F D KF + ++NQ + +N L +F+P E D + SVT
Sbjct: 599 NGF--EDAKFTDKAQASSFINNQTALVNALTKSKTTFFTPFYTTSEETADKITGAGNSVT 656
Query: 644 -----SSSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDIL---VNSEKKTFT-- 693
+S+ D ++ Y I V NSQ+YLS N+ + N + I V++ K T +
Sbjct: 657 LTRPKTSTATDVSVTYGITVAANSQIYLSVPNITYLNSNAENTLITISDVSNPKMTRSLN 716
Query: 694 -----TDNAFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKE 748
T++ SF NLG ++ + ++FP NSQV+F++ +F+RLDT+ + + ++
Sbjct: 717 SYYVGTNDTGSFLNLGSFSKETKLKVTLAFPENSQVTFDTTSFWRLDTEAYQKEMALLQS 776
Query: 749 QPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKG 808
+ KN V TY ++ IF TIPYDKGWSA DGKK+ + +AQ+GFMKV VP G
Sbjct: 777 RSPKTEMIKNGVRMTYREKEKGDIFLTIPYDKGWSAKVDGKKVAVSKAQSGFMKVSVPAG 836
Query: 809 KGTITLSFIPNGFITGAICSFTSLLLFGIYNH 840
+ L F PNG G IC +LLF YN+
Sbjct: 837 SHRLELKFFPNGLKEGIICFILGILLFIGYNY 868
>gi|125624518|ref|YP_001033001.1| ABC transporter permease protein [Lactococcus lactis subsp.
cremoris MG1363]
gi|124493326|emb|CAL98299.1| ABC transporter permease protein [Lactococcus lactis subsp.
cremoris MG1363]
Length = 883
Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats.
Identities = 388/872 (44%), Positives = 545/872 (62%), Gaps = 36/872 (4%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
MK K W SF IP+I+M+ V GIYW S S L GD +HQYV RNILH
Sbjct: 1 MKFIKKNKWALLASFFIPLILMVIVLAMTGIYWGSSRSILAGDAYHQYVAIHSLYRNILH 60
Query: 61 GNGS--LFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGL 118
GS YTFTSGLGLN YA S+YY+GSFL P +FFD+ +MPDA+YL T++KFGLIGL
Sbjct: 61 SGGSQGFLYTFTSGLGLNLYAFSAYYMGSFLMPFTFFFDVKSMPDALYLFTIIKFGLIGL 120
Query: 119 STYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITK 178
S++ S ++Q + N L++ST++ALMSF SQLEI WLDVFIL+PLII GL L+ +
Sbjct: 121 SSFVSFKNMYQKLSNLTVLSISTAFALMSFLTSQLEITMWLDVFILLPLIIWGLHRLMDE 180
Query: 179 KKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMA 238
+K LYF SL ILFIQNYYFG+M A+FL+ ++L +++++ K + LDF+++S LAG+A
Sbjct: 181 RKRWLYFVSLLILFIQNYYFGFMVAIFLVLYFLARMTYE-KWSWTKVLDFVVSSTLAGIA 239
Query: 239 SLILILPTLFDLQT-HGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGL 297
SLI++LP DL++ + + L+ ++ TE+S DLFAK F+G++DTT++ AIPMI+VGL
Sbjct: 240 SLIMLLPMYLDLKSNNSDALSTLSGIFTENSHLFDLFAKNFVGTYDTTQFNAIPMIYVGL 299
Query: 298 LPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIF 357
+P L I+FF KSI+ K + FLIASFY++ LDL WQGMH+PNMFLHRYA++F
Sbjct: 300 MPLGLAIIFFFTKSIRLRSKFAFLGIIGFLIASFYLQALDLLWQGMHSPNMFLHRYAFLF 359
Query: 358 STLLIYTAAEVLNRLKEIKIWNFL-VSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFL 416
S L++ A E L+R EIK W+ L +SLFLI+ GFL+T+ HY ++ ++LT F
Sbjct: 360 SLLIVIMALETLSRWNEIKTWHILTISLFLIL-GFLSTLVF-GHYKYVMTSQVMLTFLFG 417
Query: 417 VVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIP 476
+ Y +L + I+ +IS +LF IL+ +F+ VE +NA Q+ G+ KEW FASR YN +
Sbjct: 418 LAYLILSINSIRNWISNHLFVILLFIFMTVEAGVNALYQVQGVQKEWNFASRDYYNTQVN 477
Query: 477 AMESFSTDI----GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFK 532
++E + + G+ F RT+ T ND MK+N+N +SQFSSVRN +ASS + +LGF
Sbjct: 478 SLEPIANKVNELSGSTFARTDNTVPDTANDGMKYNFNALSQFSSVRNSNASSIMRQLGFH 537
Query: 533 SSGTNLNLRYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFA 592
+ T LNLRY N+IL DS+F I+YNIS K+GF + L +N ++ +
Sbjct: 538 TDSTYLNLRYPGNTILMDSIFAIKYNISQAQPPKFGFSPASNSLS-TLTQNSNAIGLGVF 596
Query: 593 SQFVYNDVKFNEHT-----LDNQASFLNQLANVDFDYFSPILYEKTENTDDLISVTS--- 644
+ D KF + ++NQ + +N L +F+P E +D + V S
Sbjct: 597 VPGGFKDAKFTDKAKASNFINNQTALVNALTQSKTTFFTPFYTTSEETSDKITGVGSSVT 656
Query: 645 ------SSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDIL---VNSEKKTFT-- 693
S+ D ++ Y I V NSQ+YLS N+ + N + I V++ K T +
Sbjct: 657 LTRPKTSTATDVSVTYGITVDANSQLYLSVPNITYLNSNAENTLITISDVSNPKMTRSLN 716
Query: 694 -----TDNAFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKE 748
T++ SFFNLG ++ + +SFP NSQV+F++ +F+RLDTQT + + ++K
Sbjct: 717 SYYIGTNDTGSFFNLGSFAKETKLKVTLSFPENSQVTFDTTSFWRLDTQTYQKEMARLKS 776
Query: 749 QPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKG 808
+ T KN V TY+ ++ IF TIPYDKGWSA DGKK+ + +AQ GF KV VP G
Sbjct: 777 RSPKTETIKNGVRMTYNEKEKGDIFLTIPYDKGWSAKIDGKKVPVSKAQDGFTKVTVPAG 836
Query: 809 KGTITLSFIPNGFITGAICSFTSLLLFGIYNH 840
K + L F PNG G IC +LLF YN+
Sbjct: 837 KHQLELKFFPNGLKEGIICFILGILLFIGYNY 868
>gi|116511648|ref|YP_808864.1| Predicted membrane protein [Lactococcus lactis subsp. cremoris
SK11]
gi|116107302|gb|ABJ72442.1| Predicted membrane protein [Lactococcus lactis subsp. cremoris
SK11]
Length = 883
Score = 635 bits (1637), Expect = e-180, Method: Composition-based stats.
Identities = 386/872 (44%), Positives = 541/872 (62%), Gaps = 36/872 (4%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
MK K W SF IP+I+M+ V GIYW S S L GD +HQYV RNILH
Sbjct: 1 MKFIKKNKWALLASFFIPLILMVIVLAMTGIYWGSSRSILAGDAYHQYVAIHSLYRNILH 60
Query: 61 GNGS--LFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGL 118
GS YTFTSGLGLN YA S+YY+GSFL P +FFD+ +MPDA+YL T++KFGLIGL
Sbjct: 61 SGGSQGFLYTFTSGLGLNLYAFSAYYMGSFLMPFTFFFDVKSMPDALYLFTIIKFGLIGL 120
Query: 119 STYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITK 178
S++ S ++Q + N L++ST++ALMSF SQLEI WLDVFIL+PLII GL L+ +
Sbjct: 121 SSFVSFKNMYQKLSNLTVLSISTAFALMSFLTSQLEITMWLDVFILLPLIIWGLHRLMDE 180
Query: 179 KKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMA 238
K LYF SL ILFIQNYYFG+M A+FL+ ++L +++++ K + LDF+++S LAG+A
Sbjct: 181 GKRWLYFVSLLILFIQNYYFGFMVAIFLVLYFLARMTYE-KWPWTKVLDFVVSSALAGIA 239
Query: 239 SLILILPTLFDLQT-HGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGL 297
SLI++LP DL++ + + L+ ++ TE+S DLFAK F+G++DTT++ AIPMI+VGL
Sbjct: 240 SLIMLLPMYLDLKSNNSDALSTLSGIFTENSHLFDLFAKNFVGTYDTTQFNAIPMIYVGL 299
Query: 298 LPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIF 357
+P L I+ F KSI+ K + FLIASFY++ LDL WQGMH+PNMFLHRYA++F
Sbjct: 300 MPLGLAIILFFTKSIRLRSKFAFLGIIGFLIASFYLQALDLLWQGMHSPNMFLHRYAFLF 359
Query: 358 STLLIYTAAEVLNRLKEIKIWNFL-VSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFL 416
S L++ A E L+R EIK W+ L +SLFLI+ GFL+T+ HY ++ ++LT F
Sbjct: 360 SLLIVIMALETLSRWNEIKTWHILTISLFLIL-GFLSTLVF-DHYKYVMTSQVMLTFLFG 417
Query: 417 VVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIP 476
+ Y +L + I+ +IS +LF IL+ +F+ VE +NA Q+ G+ KEW FASR YN +
Sbjct: 418 LAYLILSINSIRNWISNHLFVILLFIFMTVEAGVNALYQVQGVQKEWNFASRDYYNTQVN 477
Query: 477 AMESFSTDI----GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFK 532
++E + + G+ F RT+ T ND MK+N+N +SQFSSVRN +ASS + +LGF
Sbjct: 478 SLEPIANKVNELSGSTFARTDNTVPDTANDGMKYNFNALSQFSSVRNSNASSIMRQLGFH 537
Query: 533 SSGTNLNLRYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFA 592
+ T LNLRY N+IL DS+F I+YNIS K+GF + L +N ++ +
Sbjct: 538 TDSTYLNLRYPGNTILMDSIFAIKYNISQAQPPKFGFSPASNSLS-TLTQNSNAIGLGVF 596
Query: 593 SQFVYNDVKFNEHT-----LDNQASFLNQLANVDFDYFSPILYEKTENTDDLISVTS--- 644
+ D KF + ++NQ + +N L +F+P E +D + V S
Sbjct: 597 VPGGFKDAKFTDKAKASNFINNQTALVNALTQSKTTFFTPFYTTSEETSDKITGVGSSVT 656
Query: 645 ------SSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDIL---VNSEKKTFT-- 693
S+ D ++ Y I NSQ+YLS N+ + N + I V++ K T +
Sbjct: 657 LTRPKTSTATDVSVTYGITADANSQLYLSVPNITYLNSNAENTLITISDVSNPKMTRSLN 716
Query: 694 -----TDNAFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKE 748
T++ SFFNLG ++ + +SFP NSQV+F++ +F+RLDTQT + + +K
Sbjct: 717 SYYIGTNDTGSFFNLGSFAKETKLKVTLSFPENSQVTFDTTSFWRLDTQTYQKEMALLKS 776
Query: 749 QPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKG 808
+ T KN V TY+ ++ IF TIPYDKGWSA DGKK+ + +AQ GF KV VP G
Sbjct: 777 RSPKTETIKNGVRMTYNEKEKGDIFLTIPYDKGWSAKIDGKKVPVSKAQDGFTKVTVPAG 836
Query: 809 KGTITLSFIPNGFITGAICSFTSLLLFGIYNH 840
K + L F PNG G IC +LLF YN+
Sbjct: 837 KHQLELKFFPNGLKEGIICFILGILLFIGYNY 868
>gi|29374690|ref|NP_813842.1| hypothetical protein EF0032 [Enterococcus faecalis V583]
gi|29342148|gb|AAO79914.1| membrane protein, putative [Enterococcus faecalis V583]
Length = 871
Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats.
Identities = 326/838 (38%), Positives = 477/838 (56%), Gaps = 16/838 (1%)
Query: 4 FFKTYWTYFV-SFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGN 62
F K W Y + SF IP +IM +YLS GIY S S L D F Q+ F + N+LHG
Sbjct: 8 FLKNNWPYMLASFFIPFLIMAIIYLSIGIYPGSSRSVLASDAFSQFSNFHASFNNVLHGK 67
Query: 63 GSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYF 122
SLFYT+ + LGLN+ +L SYYLG +PLV+FF+ NMPDA+Y TLLK G GLS +F
Sbjct: 68 QSLFYTWNASLGLNYLSLISYYLGGLFTPLVFFFNNQNMPDALYFLTLLKIGSAGLSFWF 127
Query: 123 SLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFL 182
+ F+ IP + LS SYALMSF V+ E+ WLD FI +PL+I G+ L+ ++K
Sbjct: 128 LAKQTFK-IPKWSHVTLSVSYALMSFIVAHSELIMWLDAFIYLPLVILGIHRLMDQRKPT 186
Query: 183 LYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASLIL 242
L F S +LFI NYYFG+M LF +Y + D++ KS + + TS+LAG AS+I+
Sbjct: 187 LLFVSYFLLFITNYYFGFMIGLFSFLYYFARTFTDWQRYKSRIVAYFTTSLLAGGASMIM 246
Query: 243 ILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFIL 302
+LP + DL+T+GE L+E+T F+TE++ +LD+ K IG +DTTKYG+IP I++GLLP I
Sbjct: 247 VLPAVLDLRTNGETLSEITTFKTEATAFLDIIMKNMIGVYDTTKYGSIPFIYIGLLPLIF 306
Query: 303 TILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLI 362
+ +F K + KL++ F LIASFYI L+LFW GMH PNMFL RY+++FS L+I
Sbjct: 307 CLFYFVTKEVPLKNKLLFGSLFVLLIASFYITPLNLFWHGMHAPNMFLFRYSFLFSFLVI 366
Query: 363 YTAAEVLNRLK--EIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYS 420
A + + ++ + + L+ + L + + Y+++T + +LT FL++Y
Sbjct: 367 LLAGYGWEKFEKDDLGVLSGLILILLAIFALAMGTKGATSYTYVTLTSFVLTATFLLLYF 426
Query: 421 LLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMES 480
+ K + IL+ L + E +N + + GI +W +ASRS Y+ P +++
Sbjct: 427 FGIAFYQLKKAPMQYLVILLLLLVSGEAIINTRAMVTGILDDWNYASRSLYSEPYPDLKN 486
Query: 481 F---STDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTN 537
+ + F R E L + ND + + Y+GIS FSSVRNR +S+ L+ LGF+S GTN
Sbjct: 487 LVDQTKKENDTFYRLENLNGVSANDGINYGYSGISMFSSVRNRHSSTYLNALGFRSRGTN 546
Query: 538 LNLRYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAF-ASQFV 596
LN+RY NN++L D+L GI+YNI++N K+GF+ LY N+ +LP+ F A + +
Sbjct: 547 LNIRYQNNTLLMDALMGIKYNIAENNPMKFGFERQAAAGKYQLYRNENALPLGFLADKEI 606
Query: 597 YNDVKFNEHTLDNQASFLNQLANVD---FDYFSPILYEK-----TENTDDLISVTSSSNE 648
YN + L +Q + LN LAN + F ++ P + + T+NT + N
Sbjct: 607 YNVRQPLNDNLGSQTNLLNALANTNERYFTFYQPTMTLQNNVTITQNTAGVTFTEKQHNV 666
Query: 649 DAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKE 708
I Y + VP N+Q YLS F+ + + VN + ++NLGY +
Sbjct: 667 AKEISYTVNVPANTQAYLSLFPTDFAQLESSTATVTVNGSSQQSQIGITGQYYNLGYYPK 726
Query: 709 KKTFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQ 768
T N VSF G VSF P L+T +AI ++E+ V ++T K T+ +
Sbjct: 727 DTTVNFKVSFYGTKAVSFVQPQVVGLNTNAFEKAISAVQEKGVDLTTGKRSASGTFTADK 786
Query: 769 DTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAI 826
D + TIPYDKGW DGKK+ K + F+ V V G TI S++P G I G +
Sbjct: 787 DQVLVTTIPYDKGWRVKIDGKKVTPKAFKDAFLSVPVSAGTHTIQFSYLPEGLIPGIV 844
>gi|69247201|ref|ZP_00604263.1| membrane protein, putative [Enterococcus faecium DO]
gi|68194966|gb|EAN09434.1| membrane protein, putative [Enterococcus faecium DO]
Length = 889
Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats.
Identities = 319/856 (37%), Positives = 498/856 (58%), Gaps = 21/856 (2%)
Query: 1 MKLFFKTYWTYFV-SFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNIL 59
+K FF+ Y SF+IP +I+ VYLS GIY S S L D F Q+ F + RN+L
Sbjct: 5 LKSFFRENGRYAAASFLIPFLILALVYLSIGIYPGSSRSILASDAFSQFSNFHASFRNVL 64
Query: 60 HGNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLS 119
G S+FYT+ + LGLN+ +L SYYLG +PLV+FF MPDA+Y+ TLLK G GL+
Sbjct: 65 LGKQSIFYTWNASLGLNYLSLISYYLGGIFTPLVFFFPNQMMPDALYVLTLLKVGCAGLA 124
Query: 120 TYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKK 179
+F L + F+ IP +ALS SYAL+SF + EI WLD F +PL+I G+ ++ K
Sbjct: 125 FWF-LARTFK-IPRWGHVALSVSYALISFITAHSEIIMWLDAFFYLPLVILGIHRVMDLK 182
Query: 180 KFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMAS 239
+ L F S +LF+ ++Y G+M +F +++ ++ ++ K + + + ITS+LAG AS
Sbjct: 183 RPKLLFISYLLLFLSSFYMGFMIGVFSFLYFIARLLTNWSEYKKTIVPYGITSLLAGGAS 242
Query: 240 LILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLP 299
+I++LP + DL+++GE L+++T +TE++ YLDL K IG +DTTKYG+IP ++ GLLP
Sbjct: 243 MIIVLPAVLDLRSNGEALSQITTLKTEATSYLDLIMKNMIGVYDTTKYGSIPFVYAGLLP 302
Query: 300 FILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFST 359
+L + +F + + K +Y F LIASFY+ L+LFW GMH PNMFL RYA++FS
Sbjct: 303 LVLCLFYFASRKVPLKNKFLYGSLFAILIASFYLVPLNLFWHGMHAPNMFLFRYAYLFSF 362
Query: 360 LLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLAT---IYLKSHYSFLTDLNILLTLEFL 416
L++ A + ++++ L+ + L+V A I + Y+++T + +LT+ FL
Sbjct: 363 LVLLLAGKGWEKIEQ-DDRGLLLGIILVVAALFAVAWGIKPEGSYTYVTMTSFVLTVVFL 421
Query: 417 VVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIP 476
+Y+ + K +S N +IL+ L + E +N +S + GI +W +ASRS Y P
Sbjct: 422 GIYAFAVGFYQHKKLSFNHLSILLLLIMSAEALVNTNSMIHGILDDWNYASRSLYTDPYP 481
Query: 477 AMESFSTDI---GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKS 533
+++ + + F R E L + NDS+ + Y+GIS FSS+RNR++SS LDKLGF+S
Sbjct: 482 DLKALVNETKKDSDSFYRLENLDPVSANDSINYGYSGISLFSSIRNRNSSSYLDKLGFRS 541
Query: 534 SGTNLNLRYANNSILADSLFGIQYNISDN--PIDKYGFKDIYQKDNLALYENQFSLPIAF 591
GTNLN+RY NN++L D GI+YNIS N KYGF+ Q + LY+N +LP+AF
Sbjct: 542 RGTNLNIRYNNNTLLMDGFTGIKYNISKNESTFSKYGFRQAGQSGDYTLYQNVNALPLAF 601
Query: 592 ASQFVYNDVKFN-EHTLDNQASFLNQLANVD---FDYFSPILYEKTENTDDLISVT---- 643
+ NDV+ L +Q + +N L+ ++ F +++P L + T +
Sbjct: 602 TAPLSVNDVEQPVTDNLTSQTNLINTLSGLNEQYFTFYTPTLKNQLNTTITKTTTGVTYS 661
Query: 644 -SSSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFN 702
++ N+ + +++ VP N+Q YLS +F+ + I VN + + + +++
Sbjct: 662 ETADNQPKELTWEVHVPANTQAYLSLFPTNFAQLESSSATITVNGTSRKTQINISGQYYD 721
Query: 703 LGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFA 762
LGY ++ T SF G ++SF P LD A+ +IKE+ V + + K
Sbjct: 722 LGYYPQETTVTFTASFYGTKEISFMEPKVVGLDVVAYQAAMNQIKEKGVEMEATGRKASG 781
Query: 763 TYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFI 822
T + +D+ + TIPYDKGW A DGK +++ + F+ + VP GK T+T S++P GF
Sbjct: 782 TVNTAEDSMLVTTIPYDKGWKAKIDGKPVKVSNFKDAFLMIKVPAGKHTVTFSYLPEGFT 841
Query: 823 TGAICSFTSLLLFGIY 838
GAI + LF +Y
Sbjct: 842 IGAILFVLCIALFILY 857
>gi|116628678|ref|YP_821297.1| Predicted membrane protein [Streptococcus thermophilus LMD-9]
gi|116101955|gb|ABJ67101.1| Predicted membrane protein [Streptococcus thermophilus LMD-9]
Length = 623
Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats.
Identities = 271/595 (45%), Positives = 387/595 (65%), Gaps = 12/595 (2%)
Query: 253 HGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTLKSI 312
HGEK T + TES++Y D FAK +G +DTTK+G+IPMI+VGLLP IL +LFF K I
Sbjct: 12 HGEKFTAPSSLLTESTYYFDFFAKNLVGVYDTTKFGSIPMIYVGLLPLILFLLFFISKEI 71
Query: 313 KFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLNRL 372
K ++L Y + F IASF ++ LDLFWQGMH PNMFLHRY+W+ S L++ A E LNR+
Sbjct: 72 KLSLRLGYFLLLAFFIASFNLQPLDLFWQGMHAPNMFLHRYSWLLSLLIVLLAGETLNRI 131
Query: 373 KEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFIS 432
++ + L+ + +L T +SHYSF+ ++ LL+L FL+ Y++L ++ ++ I
Sbjct: 132 EKFSLQRLLLPFVGLSVAYLLTWIFQSHYSFIEPVSWLLSLAFLLAYAILFISYFRQQIP 191
Query: 433 VNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMESFSTD---IGNQF 489
++F LF + E+ LN + + EW F +R Y R++ A+ +D F
Sbjct: 192 RSVFRCFTFLFCIFELGLNTYYVVGALGNEWIFPTREGYLRNMSAISKLVSDTKQTNKNF 251
Query: 490 TRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANNSILA 549
RTE+L+ QTGNDSMKFNYNGISQFSS+RN ++SSTLD+LGFKS GTNLNLRY NN+++A
Sbjct: 252 YRTERLEAQTGNDSMKFNYNGISQFSSIRNTASSSTLDRLGFKSEGTNLNLRYQNNTLIA 311
Query: 550 DSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEHTLDN 609
DSLFGI+YN+S+ ++KYGF I + + LY+N ++ +A + +Y +V F +TLDN
Sbjct: 312 DSLFGIKYNLSNFDLNKYGFNYIASEKTVRLYQNDYASQLAILTNGIYTNVDFTVNTLDN 371
Query: 610 QASFLNQLANVDFDYFSPILYEKTENTDDLI------SVTSSSNEDAAIQYQIEVPENSQ 663
Q S +N LA ++ YF + + ++N + +V +S+N+ A I YQ+ P +SQ
Sbjct: 372 QTSLINALAGLNLTYFRRVPSQLSDNDAKSLNQRVTKNVRNSNNDFATITYQVIAPPHSQ 431
Query: 664 VYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGNSQ 723
+Y+S N+ +S+D + VN + TDN F FF+LGY + ++ IN++FPGN
Sbjct: 432 LYVSIPNISWSDDNNHSLSTTVNGVTRNQVTDNTFDFFDLGYFETEEAITINLNFPGNKA 491
Query: 724 VSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWS 783
+SF++P+FY LDTQ A+ I E+ V+TSKNKVF Y + S+FFTIPYDKGW+
Sbjct: 492 ISFDNPSFYALDTQNYKIAMDTINERDTKVTTSKNKVFTDYSSHTNASLFFTIPYDKGWT 551
Query: 784 AYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGIY 838
A + KK++I +AQ GFMKVDVP GKG + L+FIP G G I S L FGI+
Sbjct: 552 ATVNNKKVKIHRAQKGFMKVDVPSGKGKVVLTFIPYGIKIGLI---ISCLAFGIF 603
>gi|116491890|ref|YP_803625.1| Predicted membrane protein [Pediococcus pentosaceus ATCC 25745]
gi|116102040|gb|ABJ67183.1| Predicted membrane protein [Pediococcus pentosaceus ATCC 25745]
Length = 853
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 270/843 (32%), Positives = 438/843 (51%), Gaps = 33/843 (3%)
Query: 11 YFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFT 70
Y +SFI+PI I+I Y S GIYW S S L D F Q F + R +LHG SL++ +
Sbjct: 11 YLMSFILPITIVIIAYASNGIYWGSAHSILASDAFTQGANFLASFREVLHGKNSLWFNWQ 70
Query: 71 SGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQS 130
+G GLN+ AL SYYLG ++PLV F +P+A Y T+ K GL GLS++ L F+
Sbjct: 71 AGFGLNYLALYSYYLGGIVTPLVGLFSKNQIPNAFYAITIFKIGLAGLSSFSYLKHQFK- 129
Query: 131 IPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSI 190
I +L L+ SYA MSF + E WLDV ++PLI+ G+ I ++++ L F S +
Sbjct: 130 IKRYQQLLLAISYATMSFGLVNAEQIMWLDVLYILPLIVWGVDQWIEQQRWGLLFISWFL 189
Query: 191 LFIQNYYFGYMTALFLIFWYLCQ-ISWDFKTRKSSFLDFIITSVLAGMASLILILPTLFD 249
+ + N+Y +M LF+ +YL + I+ + + FI + + ++S ++ILP +
Sbjct: 190 MLVTNFYIAFMVGLFIGIYYLMKLITLKVQQWWINIGQFIGIMLWSTISSGVIILPVILT 249
Query: 250 LQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTL 309
L + L+ + T+ S DL K IG++D TK+G P I+VGL+ I + +F
Sbjct: 250 LSRNKMPLSSMNGVFTDRSGLWDLPVKSMIGAYDGTKFGTTPYIYVGLIVLIYAVSYFFN 309
Query: 310 KSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAA--- 366
+ I V++ YA+ L++ FY++ +L WQG H P MFL+RY++++S +++ AA
Sbjct: 310 RQIARRVRVGYAVLLLSLVSGFYLQFFNLTWQGWHFPAMFLYRYSFLWSFVMMQLAAYEL 369
Query: 367 EVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAV 426
EV+ E KI L S+ L+ AT+ +HY F++ N++ TL FL+V LL+ +
Sbjct: 370 EVMVSRLEAKIGIILGSVMLV-----ATVGSFNHYHFISIWNLVATLLFLIVEVLLIFSG 424
Query: 427 IKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMESFSTDIG 486
+ K +++ +L+S+ +E+++NA G+A EW + S S +N A++ I
Sbjct: 425 LNKKVAIGSL-VLVSI---LELTINAGLMFKGVATEWHYPSASLFNEPAKAIKEGLPKIR 480
Query: 487 N-QFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANN 545
N + R E L + + +D ++FNY + FSSV NR +L++LGF+S+G+NLN+ Y NN
Sbjct: 481 NDRLRRVENLDSISRDDGLRFNYGSANFFSSVTNRPFEQSLNQLGFRSTGSNLNMTYGNN 540
Query: 546 SILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLP--IAFASQFVYNDVKFN 603
+++ DS+ GIQ N++ P+DKYGF+ + + NQ +L I + N
Sbjct: 541 TLVMDSILGIQTNLALQPVDKYGFQMATRSGKFYVSNNQNALKNGIVVEQKLAENKKLSK 600
Query: 604 EHTLDNQASFLNQLANVD-----FDYFSPILYEKTENTDDL-ISVTSSSNEDAAIQYQIE 657
L NQ L+ +A+ F F L T T + + + N + +++ +
Sbjct: 601 TDNLGNQNQLLSLVAHTSVTKRLFKSFPVQLTGSTGQTAEAGLEFKNLENGNQSLKLSVT 660
Query: 658 VPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDN---AFSFFNLGYTKEKKTFNI 714
VP+N Q YLS + S + I V K+ N + NLG K++ NI
Sbjct: 661 VPKNQQAYLSLFKMQGSISQ-----ISVYKGKQLIENYNPNLVGQYINLGSFKQRTNLNI 715
Query: 715 NVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKE-QPVTVSTSKNKVFATYDVQQD-TSI 772
+V G F PT L+ + I+ ++ Q + K + D ++
Sbjct: 716 SVRLSGTGTAQFARPTLITLNEKIFQRQIELARKYQATNLKYGKRTIKGNITTNNDKQAL 775
Query: 773 FFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSL 832
TIP D GW A +GK++ +K F V + GK +T+ ++P G + GA + L
Sbjct: 776 LLTIPADPGWKAKINGKQVAVKTVDNLFTLVPLNSGKNQLTMKYVPTGLVIGAWLTILGL 835
Query: 833 LLF 835
F
Sbjct: 836 SSF 838
>gi|156867438|gb|EDO60810.1| hypothetical protein CLOLEP_02415 [Clostridium leptum DSM 753]
Length = 859
Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 215/844 (25%), Positives = 396/844 (46%), Gaps = 39/844 (4%)
Query: 10 TYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTF 69
TY ++ ++P ++++ VY++ G+Y S L+ D YV F L ++ HG +LF+++
Sbjct: 9 TYLLASVMPGVLLLSVYIALGVYPFGQRSLLITDMSQLYVDFYSYLIDVFHGQKALFFSW 68
Query: 70 TSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQ 129
GLG+N + S+YL S S L+ FFD ++ + + L T+LK GL+ K
Sbjct: 69 EGGLGMNMTGVVSFYLASPFSFLIAFFDKQSVTEGILLITILKTAACGLTFSIYTRKALH 128
Query: 130 SIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLS 189
P L S +Y+LMS+ + WLD I +PL++ GL L K LL + +
Sbjct: 129 LRAAP-NLCFSVAYSLMSYVIVYALNIMWLDGVIFLPLVLLGLHRLQDKGSMLLLTIAYT 187
Query: 190 ILFIQNYYFGYMTALFLIFWY--LCQISWDFKTRKSSFLDFIITSVLAGMASLILILPTL 247
+LFI +Y YM +F + ++ LC + F R + F ++ VLA S L LPT
Sbjct: 188 LLFIAQFYIAYMVGIFSLLYFAGLCVVEKRFSLR--TIGKFFVSVVLAAGLSAFLWLPTY 245
Query: 248 FDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFF 307
L L E F T + +F+K GS+D+ YG +P ++ G+L + L+F
Sbjct: 246 EQLAY--VYLPEPQSFSTGDVTFSKIFSKTLFGSYDSLTYG-LPNLYCGMLTMLFVPLYF 302
Query: 308 TLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAE 367
+ I K++ A+ L S + L+L W G P F +R++++ + ++ A
Sbjct: 303 FNRRISLREKIVSAVISLLLCVSMMVWRLNLLWHGGDEPTWFPYRFSFLLTFCGLFMAIR 362
Query: 368 VLNRLKEI--KIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLA 425
KE + + V ++ G L HY ++T N+L ++ L++Y ++
Sbjct: 363 AFRYHKEYLPRAYGLSVLFSALLMGGLWCF----HYEWVTFENLLASILLLLLYGFFMMV 418
Query: 426 VIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMESF---S 482
+ N+ A+ L + EM +N + +D + ++G+ RS+Y + E+ +
Sbjct: 419 SCFRPQLKNVLAVFALLSVCFEMGMNGGNLVDSLDSQFGYEDRSTYTENYNRKEALVQQA 478
Query: 483 TDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRY 542
+ + + R E + ND+ Y+G++ +SS NR+ SS L +LG + LRY
Sbjct: 479 CRLDSGWYRLEDKTRRNANDAFSLGYHGLAHYSSFTNRNMSSFLSRLGVSARVQGRFLRY 538
Query: 543 ANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYN--DV 600
+ +S + DSL GI+Y I + + + D LYEN +LP AF S +
Sbjct: 539 SGSSNVIDSLLGIRYVIGRRAPHQ-DYVPAAEIDGFRLYENPDALPAAFLSSTDLGGFHI 597
Query: 601 KFNEHTLDNQASFLNQLANVDFDYFSPI----------LYEKTENTDDLISVTSSSNEDA 650
+E+ + Q ++ L + +YF+ + Y +D +VT E+A
Sbjct: 598 AQDENVFEAQNHLMSALLGEEKEYFTAVDGVEMTPSRYAYPGQWFSDGWCTVTKMEGEEA 657
Query: 651 AIQYQIEVPENSQVYLSFTNLHFSNDKQKKVD-ILVNSEKKTFTTDNAFSFFNLGYTKEK 709
+++ + ++ ++Y T+ F+++ +D ++ EK T +LG+ +E
Sbjct: 658 YLEFSLVNDKDQEIYFYMTSSGFADNNYLFLDGRILEDEKHPLT-----GAVDLGWFEEG 712
Query: 710 KTFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVT-VSTSKNKVFATYDVQQ 768
+T + + G+ + P FY D + + +K + +T ++ + T +V++
Sbjct: 713 ETIKVQMYLNGD-LTYLQMPLFYGFDAEAFHQDCDALKARGMTEITQDLTGLSGTVEVEE 771
Query: 769 DTSIFFT-IPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAIC 827
++ FT +P D GW+ + DG++ F+ V + KG ++ +F P G G +
Sbjct: 772 GEAVLFTSLPADPGWTVWVDGEQTPWNTVSDAFLTVRLSKGSHRVSFTFCPAGLREGLLI 831
Query: 828 SFTS 831
+ S
Sbjct: 832 TAAS 835
>gi|3043878|gb|AAC14608.1| transmembrane protein Tmp5 [Lactococcus lactis]
Length = 273
Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats.
Identities = 140/271 (51%), Positives = 190/271 (70%), Gaps = 4/271 (1%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
MK K W SF IP+I+M+ V GIYW S S L GD +HQYV RNILH
Sbjct: 1 MKFIKKNKWALLASFFIPLILMVIVLAMTGIYWGSSRSILAGDAYHQYVAIHSLYRNILH 60
Query: 61 GNGS--LFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGL 118
GS YTFTSGLGLN YA S+YY+GSFL P +FFD+ +MPDA+YL T++KFGLIGL
Sbjct: 61 SGGSQGFLYTFTSGLGLNLYAFSAYYMGSFLMPFTFFFDVKSMPDALYLFTIIKFGLIGL 120
Query: 119 STYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITK 178
S++ S ++Q + N L++ST++ALMSF SQLEI WLDVFIL+PLII GL L+ +
Sbjct: 121 SSFVSFKNMYQKLSNLTVLSISTAFALMSFLTSQLEITMWLDVFILLPLIIWGLHRLMDE 180
Query: 179 KKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMA 238
+K LYF SL ILFIQNYYFG+M A+FL+ ++L +++++ K + LDF+++S LAG+A
Sbjct: 181 RKRWLYFVSLLILFIQNYYFGFMVAIFLVLYFLARMTYE-KWSWTKVLDFVVSSTLAGIA 239
Query: 239 SLILILPTLFDLQT-HGEKLTEVTKFQTESS 268
SLI++LP DL++ + + L+ ++ TE+S
Sbjct: 240 SLIMLLPMYLDLKSNNSDALSTLSGIFTENS 270
>gi|28378273|ref|NP_785165.1| integral membrane protein [Lactobacillus plantarum WCFS1]
gi|28271108|emb|CAD64013.1| integral membrane protein [Lactobacillus plantarum WCFS1]
Length = 881
Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats.
Identities = 235/883 (26%), Positives = 410/883 (46%), Gaps = 72/883 (8%)
Query: 2 KLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYV-IFDIALRNILH 60
+ F K W ++SF +P++IM G ++ + + +S L D QYV +F +LH
Sbjct: 5 RFFDKRTWPLWISFWLPLLIMTGYFIYRHMAPFGSSSLLTVDLGQQYVDLFSYFRHTLLH 64
Query: 61 GNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
+ FY+F+ +G + +YYL S + + F ++ +++ T+LK+G GLS
Sbjct: 65 DPSAFFYSFSKTIGGEMVGVWAYYLMSPFNLIYLLFPGQSITTGIFIVTVLKYGFAGLSF 124
Query: 121 YFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKK 180
+ L K Q+ L ST+YALM + V+ WLD ++PL+I GL+ L T K
Sbjct: 125 AWLLTKT-QTQKGWLVPTFSTAYALMGWMVANQLNMIWLDTVAILPLVILGLERLFTTGK 183
Query: 181 FLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQIS--W-DFKTRKSSFLDFIITSVLAGM 237
+ L+++ I NYY GYM LF ++L + W + KT + L F +L
Sbjct: 184 VRYFAGWLAVMLIDNYYMGYMVILFSCLYWLYGATKYWQNVKTLATHALKFAWGGLLGVA 243
Query: 238 ASLILILPTLFDLQTHGEKLTEVTKFQTESSWYLD-----LFAKQFIGSFDTTKY-GAIP 291
S L+LPT + L + VTK W L+ + AK G+F+ + P
Sbjct: 244 FSAWLLLPTFWAL-IQSKAQYNVTKVH----WKLEYAPWKMLAKFVTGTFNFDQMPSGQP 298
Query: 292 MIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLH 351
+V L + +LFF + K+ VKL I LI SF E LDL W P + +
Sbjct: 299 NFYVAWLAVLAFVLFFLRRQFKWSVKLSALIVTATLILSFCYEPLDLLWHAGQFPVWYPY 358
Query: 352 RYAWIFSTLLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLK-SHYSFLTDLNIL 410
R++++F +++ A+ L IK+W L L L+V F TIYL +++T N+L
Sbjct: 359 RFSFVFCFWVVWIGAQALTDKITIKLWQALTMLALLVVLF-TTIYLNIKKVTYVTQANLL 417
Query: 411 LTLEFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSS 470
+T+ L +L+ L + K+ ++ I+ + + +MS+N + ++ I+ + S+S
Sbjct: 418 ITIG-LAAITLIFLTLPKE--RRLIYQIVALILVATDMSINVVASLNNIS----YVSQSE 470
Query: 471 YNRDIPAMESFSTDI---GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLD 527
+ + +++ I N+F R K T+T +D M+ YNG FSS +
Sbjct: 471 FGKYTQVLDNAVNKIKASNNRFYRIGKTFTRTKDDPMQAAYNGADHFSSTFESIIPNFFG 530
Query: 528 KLGFKSSGTNLNLRYANNSILADSLFGIQY----NISDNPIDKYGF----------KDI- 572
+G + G + + Y N +++ DSL +QY + + D + KD+
Sbjct: 531 SIG-QPDGDGV-VAYTNGTMITDSLLDMQYFMDKTVPTSQTDNANYRSYIPVTSTKKDLT 588
Query: 573 -YQK------DNLALYENQFSLPIAFASQFVYNDVKFNEHTLD---NQASFLNQLAN--- 619
YQK + + Y+N ++L + FA+ +K ++ T D Q LAN
Sbjct: 589 NYQKSAKLSTNKVTTYKNPYALGLGFAASDKITSLKVSKTTGDPIARQELIYQTLANRST 648
Query: 620 ---VDFDYFSPILYEKTENTDDLI-SVTSSSN--EDAAIQYQIEVPENSQVYLSF-TNLH 672
+ + F+ ++++ + L +V + N + ++ ++ N Y++ NL
Sbjct: 649 SGLISAENFNEVVFQNVKKVTTLTGAVLNKQNLAKTGSVYFKFTPTTNDSYYITLGQNLT 708
Query: 673 FSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFY 732
SN + E K + T N+ + KT + S + ++ T Y
Sbjct: 709 TSNASY----YINGKELKQYPTYRHTIAVNVASNSKGKTVTFGIQMKKTS-LWLQNFTLY 763
Query: 733 RLDTQTLTEAIQKIKEQPVTVST-SKNKVFATYDVQQDTSIFF-TIPYDKGWSAYQDGKK 790
+LD ++ QK+++ P ++ S K+ T +++ + TIPY KGW A DGK
Sbjct: 764 KLDNTQFKKSAQKLQQSPWNITAHSSRKITGTINIKHRHQVLMTTIPYSKGWHATVDGKS 823
Query: 791 IEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLL 833
+ K+ F+ V + KGK T+TL++ P ITG++ + S L
Sbjct: 824 VATKKVINTFVAVPLSKGKHTVTLTYRPPFLITGSLITGISAL 866
>gi|56808871|ref|ZP_00366582.1| COG4485: Predicted membrane protein [Streptococcus pyogenes M49
591]
Length = 305
Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats.
Identities = 118/290 (40%), Positives = 174/290 (60%), Gaps = 4/290 (1%)
Query: 550 DSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEHTLDN 609
DSL GI+YN+S+ P +K+GF + N LY+N +S P+A ++ VY DV N +TLDN
Sbjct: 2 DSLLGIKYNLSEGPPNKFGFTKLKTSGNTTLYQNHYSSPLAILTRNVYKDVNLNVNTLDN 61
Query: 610 QASFLNQLANVDFDYFS---PILYEKTENTDDLISVTSSSNEDA-AIQYQIEVPENSQVY 665
Q LNQL+ YF+ L + IS +S +++ + YQI +P++SQ+Y
Sbjct: 62 QTKLLNQLSGKSLTYFNLQPAQLISGANQFNGQISAQASDYQNSVTLNYQINIPKHSQLY 121
Query: 666 LSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGNSQVS 725
+S N+ FSN K+V I ++ +TTDNA+SFF+LGY + K + FP N Q+S
Sbjct: 122 VSIPNIIFSNPDAKEVRIQTDNHNFIYTTDNAYSFFDLGYFADAKVATFSFVFPKNKQIS 181
Query: 726 FESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAY 785
F+ P FY L ++ EA+ IK++ V N V Y+ + S+ FT+PYDKGWSA
Sbjct: 182 FKEPHFYSLSIESYLEAMNSIKQKNVHTYAKSNTVITDYNSKTKGSLIFTLPYDKGWSAQ 241
Query: 786 QDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLF 835
+DGK + +K+AQ GF+ V +PKGKG + L+FIPNGF G S ++ +
Sbjct: 242 KDGKNLPVKKAQGGFLSVTIPKGKGRVILTFIPNGFKLGLSLSCVGIIAY 291
>gi|90962064|ref|YP_535980.1| Hypothetical membrane spanning protein [Lactobacillus salivarius
subsp. salivarius UCC118]
gi|90821258|gb|ABD99897.1| Hypothetical membrane spanning protein [Lactobacillus salivarius
subsp. salivarius UCC118]
Length = 881
Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats.
Identities = 226/883 (25%), Positives = 408/883 (46%), Gaps = 62/883 (7%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALR-NIL 59
MK F + + +SF PI+IM+ ++++ +Y ++ L D QYV F R +L
Sbjct: 5 MKSFINNKYPFLLSFFGPIVIMLAYFIARHMYPFGSSTILTVDLGQQYVDFFAFFRETLL 64
Query: 60 HGNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLS 119
H GS FY+F+ +G +YYL S + L FF ++ V + TLLK+G GLS
Sbjct: 65 HHPGSFFYSFSKAIGGEMIGEWAYYLLSPFNLLFIFFPGKSIAAGVLVVTLLKYGFCGLS 124
Query: 120 TYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKK 179
+ L+K + + S SYALM++ V W+D IL+PLII L+ K+
Sbjct: 125 FAYLLSKR-KLQKGWMIPTFSISYALMAWNVVNQLNLLWMDAAILLPLIIASFYDLMEKR 183
Query: 180 KFLLYFTSLSILFIQNYYFGYMTALFLIF---WYLCQISWDFKTRKSSFLDFIITSVLAG 236
K Y L+++ I NYY YM +FL+ WY + FK S F S+LAG
Sbjct: 184 KMKTYPLLLALMLIDNYYMAYMICIFLVLFFIWYQITYTTKFKEFLSRTWLFASRSILAG 243
Query: 237 MASLILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKY-GAIPMIFV 295
+ ++++PT L + + TE + L + +K IGSF+ + P IF+
Sbjct: 244 GIAAVILIPTAITLTSSKGQYTESSIQAKLEYNPLKMLSKLTIGSFNFDQMPSGFPNIFI 303
Query: 296 GLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAW 355
G L IL+F + ++ + F S E LDLFW GM P + +R+ +
Sbjct: 304 GSLALFAFILYFFNRQNTIKSRISAFLISIFFTVSMCFEPLDLFWHGMQFPVWYPYRFTF 363
Query: 356 IFSTLLIYTAAE-VLNRLKEIKIWNFLVSLFLIVTGFLATIYL---KSHYSFLTDLNILL 411
I S +++ ++ + N + +K W + LF I G ++ +++ K +Y+ L
Sbjct: 364 IVSFWMLFLGSQGITNFIVNVKPWKIFL-LFFIEVGIISYVWINIKKFNYATTETLIFSA 422
Query: 412 TLEFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSY 471
T FLV LLLL++ + +L+ L + EMS N ++ I+ + S+ +
Sbjct: 423 TFAFLV---LLLLSINSTNDRSIIKFLLLFLVAVSEMSANMIFSLNNIS----YLSKREF 475
Query: 472 NRDIPAMESFSTDI---GNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDK 528
A+ + S+ + + F RT ++ ++T ND + N N + FSS ++
Sbjct: 476 ADPTTALTADSSWLHRHDSSFYRTAQIYSRTKNDGITHNLNAGAYFSSALEKNIPDFYGM 535
Query: 529 LGFKSSGTNLNLRYANNSILADSLFGIQYNIS---DNPI-----------------DKYG 568
+G + G N + Y+N S++ D L ++Y I+ +N + D
Sbjct: 536 IG-QPDGDNY-VTYSNGSLITDGLLDMKYAIAPKNNNEVTEGSSHGYPLIQTSERSDLSS 593
Query: 569 FKDIYQKDNLALYENQFSLPIAFASQFVYNDV-KFNEHTLDNQASFLNQLANV--DFDYF 625
++ + ++Y+N ++ I +++ + + + ++ + Q+++LN ++ YF
Sbjct: 594 YQLLKNNPRTSIYQNLYATSIGYSAGSTISKMQRLFDNPVIYQSNWLNAASSSMPGTTYF 653
Query: 626 SPILYEKT--ENTDDLISVTSS------SNEDAAIQYQIEVPENSQVYLSFTNLHFSNDK 677
+ + + K NT + ++T+S ++DA+I ++ N+ YL+ ND
Sbjct: 654 TAMNFNKVIFTNTVEKTTLTNSDFKKIDKSKDASITFEFIPTTNNSYYLTL-GTSLDND- 711
Query: 678 QKKVDILVNSEK-KTFTTDNAFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDT 736
V+ L+N ++T + N+ + K +I F ++ + + Y+LD
Sbjct: 712 --NVEFLINDRVLHNYSTFRHTTLVNVANNDKGKKISITAKFKKDN-LWLNNFVLYQLDN 768
Query: 737 QTLTEAIQKIKEQPVTVST-SKNKVFATYDVQQDTSIF-FTIPYDKGWSAYQDGKKIEIK 794
+ + + +IK+ + S + T ++ + F TIPY+ GW AY DGK++
Sbjct: 769 NLVKQKLTQIKKYSWKIKDYSSTSLNGTINIAKSNQWFATTIPYNDGWKAYVDGKEVPTY 828
Query: 795 QAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 837
+ Q F+ + KG + L+F P G + S SL+L I
Sbjct: 829 KIQQTFIGFPISKGHHQVKLTFTPPYLYQGLVVSVISLMLLFI 871
>gi|81428946|ref|YP_395946.1| Hypothetical membrane protein [Lactobacillus sakei subsp. sakei
23K]
gi|78610588|emb|CAI55639.1| Hypothetical membrane protein [Lactobacillus sakei subsp. sakei
23K]
Length = 871
Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats.
Identities = 227/871 (26%), Positives = 396/871 (45%), Gaps = 69/871 (7%)
Query: 4 FFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRN-ILHGN 62
F + ++ +SF++P I+ LS+ ++ + + D QY+ F R +L
Sbjct: 7 FLRRHYALGLSFLLPFAIIFIYGLSRHVFPFGGQTIMTVDLGQQYIDFFAYFRTTLLQHP 66
Query: 63 GSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYF 122
+ FY+F GLG + + +YYL S + LV + V+L LLK+G GLS +
Sbjct: 67 DTFFYSFAKGLGGDMLGVWAYYLMSPFNLLVLLTPGKWLSFGVWLMVLLKYGFSGLSFAY 126
Query: 123 SLNK--LFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKK 180
L K L P LS +YAL F ++ WLD I +PL++ G++ L +++
Sbjct: 127 YLKKSRLLSGWWLP---TLSLTYALSGFAIANQFNVMWLDAMIWLPLVVLGIEQLFERQR 183
Query: 181 FLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSS---FLDFIITSVLAGM 237
F LY SL+ L I NYY GYM LF++ ++ FKT + + +L F S+LAG+
Sbjct: 184 FWLYPLSLAALLIINYYMGYMVCLFVVAYFFWASVHHFKTWRQTCLVYLKFAGGSILAGL 243
Query: 238 ASLILILPTLFDL-QTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKY-GAIPMIFV 295
+ L+LPT F L Q+ G+ + ++ + + L + +K +G+F+ + P IFV
Sbjct: 244 LAAWLLLPTFFQLTQSKGQYTIQKIHWKIDYN-PLKILSKLVVGNFNFDQMPKGEPNIFV 302
Query: 296 GLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAW 355
G L I I +F + I +L + FL S E LDL W GM P + +R+++
Sbjct: 303 GSLILIGFITYFLTRKIPIKERLAALLVTGFLGLSLCFEPLDLLWHGMQFPVWYPYRFSY 362
Query: 356 IFSTLLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEF 415
+ S LI A + L+ + K ++ L L L+ T +S L++ +LL++ F
Sbjct: 363 VISFWLIVLAVQRLHYQPQFKWYSLLAPLLLLAASLAYTFKHVKTFSALSERQVLLSVGF 422
Query: 416 LVVYSLLLL--AVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNR 473
L+ SL+L+ A K++ ++ L L EM+ NA ++ I+ + S+ Y
Sbjct: 423 LIAVSLILMLPARFKRYTTIFLL-----LVTGGEMTANAVLSLNQIS----YVSQKDYAD 473
Query: 474 DIPAMESFSTDIGNQ--FTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGF 531
++S + N+ F R K +T ND M+ NY G S F+S+ S + +G
Sbjct: 474 YTEQLQSAVAAVPNKVPFQRIGKTFMRTKNDPMQANYFGGSHFNSMLEPSYPKFMGSIG- 532
Query: 532 KSSGTNLNLRYANNSILADSLFGIQYNI-----------SDNPIDKYGFKDIYQKDNLAL 580
+ ++ N ++ D+L +Y + S N D ++ I Q +A+
Sbjct: 533 -EPAGDGSVADTNQTMFTDALLSYRYYLNSTSVQATVPRSTNKPDLSDYRQIKQNGQIAI 591
Query: 581 YENQFSLPIAFAS------QFVYNDVKFNEH-----TLDNQASFLNQLANVDFDYFSPIL 629
Y+N +LP+ FA+ V D E L + + NQL + YF+ +
Sbjct: 592 YQNDNALPLGFAASDKVLKHKVTADYPILEQGNIATKLTDNPTLGNQLFTL--QYFNTVS 649
Query: 630 YEKTENTDDL--ISVTSSSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNS 687
Y+ T+ L + +S +DA + Y N YL+ + N + ++ +
Sbjct: 650 YQNTKQKPKLNETFLRINSKKDAHVTYTFTPTTNDPYYLTLGSSLEKNAVRLTLNGQPIT 709
Query: 688 EKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIK 747
+ TF A + N K + ++++F ++ ++ Y L+ +TL++ ++K
Sbjct: 710 QYDTFRDTVALNLTNKALGKPQ---TLDIAF-SKDEIWLQNINLYSLNLETLSKITTQLK 765
Query: 748 EQPVTVSTSKNKVFATYDVQQDTSI-------FFTIPYDKGWSAYQDGKKIEIKQAQTGF 800
+ P+ + K F+ + D +I TIPY GW D ++ + F
Sbjct: 766 QSPLHI-----KHFSNTHISGDITIKHKNQVLMTTIPYAPGWQVTVDNHPVKAVKGLKNF 820
Query: 801 MKVDVPKGKGTITLSFIPNGFITGAICSFTS 831
+ V + G I L++ P F G + S S
Sbjct: 821 IAVPLKAGHHQIKLTYRPPYFKLGLLISVVS 851
>gi|116334644|ref|YP_796171.1| Predicted membrane protein [Lactobacillus brevis ATCC 367]
gi|116099991|gb|ABJ65140.1| Predicted membrane protein [Lactobacillus brevis ATCC 367]
Length = 883
Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats.
Identities = 231/886 (26%), Positives = 404/886 (45%), Gaps = 64/886 (7%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYV-IFDIALRNIL 59
M F + + +SF+IP+I+M+ Y+ + + +S L D QY+ F R IL
Sbjct: 6 MISFVQKNKVHIISFLIPVILMLIYYIYRKMVPFGGSSLLTVDLGQQYIDFFSYFRRAIL 65
Query: 60 HGNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLS 119
H S+ Y+F++GLG + SYYL S L+ L+ FF T++ + L TLLK+GL LS
Sbjct: 66 HDPSSIVYSFSNGLGGGMIGIWSYYLLSPLNWLLLFFPGTHITSGIMLLTLLKYGLASLS 125
Query: 120 TYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKK 179
+ + K Q I L + S SYALM +T++ WLD+ L+PLI+ GL ++
Sbjct: 126 FSWLIKKNSQ-ISGVLIVLFSISYALMGWTIANQLNIMWLDILFLLPLILNGLIKILNGG 184
Query: 180 KFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDF----KTRKSSFLDFIITSVLA 235
K Y L++ FI NYY GYM +LF+I + ++ F K R S+ F+ +S+++
Sbjct: 185 KRGSYIVWLTLAFISNYYMGYMVSLFIILMFCFLVTDGFVNWKKVRIQSY-SFVTSSLIS 243
Query: 236 GMASLILILPTLFDLQTHGEKLTEVTKFQTESSWY-LDLFAKQFIGSFDTTKY-GAIPMI 293
G+ + ++LPT L + T VT F+ + ++ LD AK F+G+F+ ++ + +
Sbjct: 244 GLLASFILLPTFVSLLQSKAQYT-VTTFKWKFDYFPLDSLAKFFVGTFNFSQMPTGMANL 302
Query: 294 FVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRY 353
FVG LP + ++L+F + +++ + L S + LDL W P + +R+
Sbjct: 303 FVGSLPVLGSLLYFFDRRFSTRGRIVAGMITLVLFLSLCFQPLDLLWHAGQYPVWYPYRF 362
Query: 354 AWIFSTLLIYTAAEVL-NRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLT 412
+++ L++ A+ V N + K F V + LI I LK +FLT N +
Sbjct: 363 SFVVGFWLLWLASRVFTNEFRLTKRSFFGVGVILIACCAYIGIRLKRFDNFLTITNYGIG 422
Query: 413 LEFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYN 472
+ FLV + ++L + + + ++ + V + L S+ + K + S+S Y
Sbjct: 423 VIFLVAFVVILFFYTR-------YKKMCTILLCVLVVLELSTNVFLSLKNISYVSQSDYG 475
Query: 473 RDIPAMESFSTDIGNQ---FTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKL 529
++ I ++ F R K +T +D + +NG S FSS ++ +S + +
Sbjct: 476 NYTRELQRLVNQIKSKDSGFYRIGKNFLRTKDDPFQTGFNGGSVFSSTLEKNTASFMKNI 535
Query: 530 GFKSSGTNLNLRYANNSILADSLFGIQY-----------------NISDNPIDKYGFKDI 572
G SG+ + Y+N +++ DSL G++Y S D +K+I
Sbjct: 536 G-TPSGSGF-IEYSNGTLVTDSLLGMKYYFGKDQTLGVQNNKNILQASSARSDLSNYKEI 593
Query: 573 YQKDNLALYENQFSLPIAFASQFVYNDVKFNEHTLDNQASFLNQLANVDFDY-------- 624
+ N+ LPI +A+ V E S + DY
Sbjct: 594 SHDQQATVLYNKNYLPIGYAASAQALTVNSKEKNPAQYQSNIIAGLTGKKDYKRLFHAES 653
Query: 625 FSPILYEKTE-----NTDDLISVTSSSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDKQK 679
FS ++ T N L + S + A I++ N YL S K
Sbjct: 654 FSSTSFQNTNIPWKINNAKLRKIDKS--KSAFFHLFIKLKTNDSYYLRLD----STLDAK 707
Query: 680 KVDILVN-SEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTQT 738
V I++N E + N N+ + +T ++ + +S + + YRL+
Sbjct: 708 NVKIILNGQELQQSRPYNGSVLTNIANHNKGQTLDLELQMNKDS-LDLKDFQIYRLNGSK 766
Query: 739 LTEAIQKIKEQPVTVSTSKNKVF-ATYDVQQDTSIFFT-IPYDKGWSAYQDGKKIEIKQA 796
L++AI+ +K+ + ++ + F + +D I T IPY +GW +G ++ +
Sbjct: 767 LSKAIKGLKQGQLKLTHHTARSFDGVVNNTKDGRILNTSIPYSRGWHVSVNGNSVKTYKV 826
Query: 797 QTGFMKVDVPKGKGTITLSFIPNGFITG-AICSFTSLLLFGIYNHR 841
FM + +PKG I++++ P G AI T +++F N R
Sbjct: 827 FNTFMAIKLPKGVSRISIAYWPPLLNLGIAISILTLVVIFTFTNRR 872
>gi|29377393|ref|NP_816547.1| hypothetical protein EF2929 [Enterococcus faecalis V583]
gi|29344860|gb|AAO82617.1| membrane protein, putative [Enterococcus faecalis V583]
Length = 854
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 225/861 (26%), Positives = 380/861 (44%), Gaps = 92/861 (10%)
Query: 36 DTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYF 95
D + L+ D QY+ F L+ H + FY+F++ +G + L++YYL S + L +F
Sbjct: 34 DNNLLVSDLGTQYMPFLSFLKRSFHEGITTFYSFSNEIGESIVPLAAYYLLSPFNVLAFF 93
Query: 96 FDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEI 155
F +P A+ LK L+G + + L +Q + + L STSY+ F +
Sbjct: 94 FPYEQLPIAILWIITLKLALMGTTMFSYLKYTYQKV-DGTTLLFSTSYSFCGFVTVYSQN 152
Query: 156 KTWLDVFILIPLIITGLQILITKKKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQIS 215
WLD IL PLI+ GLQ L ++K+ LY +L + + NYY GYM LF + + I
Sbjct: 153 FMWLDALILFPLILLGLQRLWDQRKWGLYSITLFLAIVTNYYMGYMICLFAVLY---SIY 209
Query: 216 WDFKTR----------KSSFLDFIITSVLAGMASLILILPTLFDLQTHGEKLTEVTKFQT 265
W FK K S L FI+ S L G A+ L+LP + + +V+ F
Sbjct: 210 WFFKKNTKAHAIRQFFKQSPL-FILVSFLTGTATSFLLLPAAEGMLYTKKADFDVSTFFL 268
Query: 266 ESSWYLDLFAKQFIGSFD-TTKYGAIPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIFF 324
+ F++ +GS + + +P +F GL +L + +F K I ++ AI
Sbjct: 269 TPKFNTSFFSQLGLGSINYELRLDHLPTVFAGLFVTLLCVAYFQTKQIALKERIASAILL 328
Query: 325 TFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLNRLKEIKI-WNFLVS 383
L SF++E + W +P F +R +IFS LLI A EV LK++ I W +
Sbjct: 329 FILFLSFWLEAFNTVWHMFQSPAGFPYRNVFIFSFLLIVFAYEVW--LKKVTIPWTAPII 386
Query: 384 LFLIVTGFLATIYLKSHYSFLTDLNIL-LTLEFL-VVYSLLLLAVIKKFISVNLFAILIS 441
L++ ++Y + L +N L L+L F+ +++ L LA K + ++++
Sbjct: 387 FSLLLVIGYGSLYYGPQKNLLISINYLWLSLLFIWLIFFCLRLAHKKALRNY----VVVA 442
Query: 442 LFIMVEMSLNASSQMDGIAKEWGFASRSSYNRD------------------------IPA 477
LF++V L + + K F S++++ +D IP+
Sbjct: 443 LFLLVSTELTTNFWIS--FKHMPFGSQATFAQDYRKHSQLIDEKMASAPELYRMKQVIPS 500
Query: 478 MESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTN 537
E+ +I N + N+ + + Y G+S ++S + TL LG +
Sbjct: 501 KETGFREINNGY-----------NNPLLYGYAGVSSYTSTLTATTQDTLSALGLYRK-ND 548
Query: 538 LNLRYANNSILADSLFGIQYNISDNPIDKYGFKDIYQK-DNLALYENQFSLPIAFASQFV 596
+ Y +NS L + L ++Y+ PI+K + + + + + EN ++ + F +
Sbjct: 549 RRIAYVDNSQLTNLLLNVKYDFL--PIEKPTSEKLLKTVGSTKIMENDEAIGMGFLAPTA 606
Query: 597 YNDVKFNEHT-LDNQASFLNQLANVDFDYFSPILYEKTENTDDLISVTSSSNEDAAIQYQ 655
+K ++ LD Q L L D YF T LI+ +NE I+
Sbjct: 607 LTKLKLAKNNPLDAQEELLQTLVPTDKPYF---------KTASLINEPHHTNE--TIEAT 655
Query: 656 IEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNIN 715
+V ++L NL + Q KV+ V S T+ FNLG+ ++ T +
Sbjct: 656 FKVNSTGDLHLYIPNLKWKKVTQLKVNQQVISTPIYIATNQ---LFNLGHFEKGTT--VT 710
Query: 716 VSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTV-STSKNKVFATYDVQ-QDTSIF 773
+S V + LD A+ K+++Q + V +T K + +V DT +
Sbjct: 711 LSLTAEQVVDLTNWQLQTLDQTAFNRAVDKLRQQALHVNATKKGHLNGALNVPGNDTQLL 770
Query: 774 FT-IPYDKGWSAYQDGKKIEIKQAQT--GFMKVDVPKGKGTITLSFIPNGFITGAICSFT 830
+T IPYD+ W +K +K + GF+ V+VP GK +T ++ P G S T
Sbjct: 771 YTSIPYDQDWQVKSSLQKEPLKTQRILGGFLAVEVPAGKQQLTFAYHPRMIYLGTAVSGT 830
Query: 831 SLL----LFGIYNHRQKSSKA 847
LL G +R+K +A
Sbjct: 831 ILLGTAGYLGFKKYRRKRQEA 851
>gi|148544436|ref|YP_001271806.1| membrane protein-like protein [Lactobacillus reuteri F275]
gi|148531470|gb|ABQ83469.1| membrane protein-like protein [Lactobacillus reuteri F275]
Length = 871
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 215/870 (24%), Positives = 392/870 (45%), Gaps = 57/870 (6%)
Query: 14 SFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRN-ILHGNGSLFYTFTSG 72
SF++P+I+M + + + +S L D QYV F LRN ILH S FY+F+ G
Sbjct: 18 SFLLPVILMACYFAYRQMTPFGKSSLLTVDLGQQYVDFFSYLRNTILHHPSSFFYSFSKG 77
Query: 73 LGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSIP 132
LG + ++YYL S L+ ++ FF ++ + + TL+++GL GLS + + K +
Sbjct: 78 LGGEMFGTNAYYLLSPLNLILLFFPAQHLATGITIVTLVRYGLAGLSFAWLMQKT-ELQQ 136
Query: 133 NPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSILF 192
LA ST Y++ + ++ W D IL+PLII GL LI + + Y L+++
Sbjct: 137 GWRILAFSTVYSMNGWMIANQLNMIWQDALILLPLIIWGLLKLIYQNRVGTYIAWLAVIL 196
Query: 193 IQNYYFGYMTALFLIFWYLCQI----SWDFKTRKSSFLDFIITSVLAGMASLILILPTLF 248
I NYY G+M A+F ++L Q SW + R FL ++ +S+LA S +++LPT +
Sbjct: 197 IDNYYMGWMIAIFTFLFFLWQTPALASW--RQRGVIFLRYLGSSLLAAGISAVILLPTFY 254
Query: 249 DLQTHGEKLTEVTKFQTESSWYL-DLFAKQFIGSFDTTKY-GAIPMIFVGLLPFILTILF 306
L TE TK + ++ + K GSF+ + P I++G+L + L+
Sbjct: 255 ALMQSKGTYTE-TKIHSRFEYFAPKMLGKLVPGSFNFNQMPSGQPNIYIGMLLMLGACLY 313
Query: 307 FTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAA 366
F +LI A F I SF E LDL W P + +R++++FS IY AA
Sbjct: 314 FFNNRFDLRRRLIGAAISIFFIFSFCYEPLDLLWHAGQFPVWYPYRFSYLFSFWCIYLAA 373
Query: 367 EVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAV 426
+VL +IK + L+ LI+ + L Y NI L + V L
Sbjct: 374 KVLQPDFKIKKRSALILTLLIIAIYWYVGMLNLSYINSNQRNIGLCFALIAVSCL----C 429
Query: 427 IKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMESFSTDIG 486
I + S L+ L+ L + ++S++ + ++ I+ + S+ + A++ +
Sbjct: 430 IPRTNSPRLYDALLVLLAVCDISMSGYTALNKIS----YVSQPEFGNYTIALDKSVEKLK 485
Query: 487 NQ---FTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYA 543
F R K +T +D + ++N F S + + +G + G + Y
Sbjct: 486 KHDPGFYRVAKTFMRTKDDPFQADFNSGDHFGSTLEPPIPAFMGAIG-QPDGDGF-VTYT 543
Query: 544 NNSILADSLFGIQYNISDN--------PI-----DKYGFKDIYQKDNLALYENQFSLPIA 590
N + ++D+L G +Y ++ P+ D Y + + + L EN +LPIA
Sbjct: 544 NGTQVSDALLGYKYTMNARNTSAGQALPLSGFRPDWYSYPLVGSTSAVNLRENPHALPIA 603
Query: 591 F-ASQFVYNDVKFNEHTLDNQASFLNQLAN-------VDFDYFSPILYEKTENTDDLISV 642
F A+ + + + L+ Q+ LA F+ + + ++ +
Sbjct: 604 FGANAAILHLQRTTMDPLNYQSQIFQTLAGRPTLHSLFAVQNFNSVKFNNVQSAKQITGT 663
Query: 643 TSSSN---EDAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKT-FTTDNAF 698
+ A++Q + P N YL+ + + I +N++K T + T
Sbjct: 664 IFRKQNLLKPASVQLEFIPPTNDSYYLT-----LGPNVEDNATITMNNKKFTQYDTFRNT 718
Query: 699 SFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSK- 757
N+ + ++ + +N+ + + ++ + Y+L + +++ ++E P+ +S+ +
Sbjct: 719 VVINVAHDQKGQKILVNLQLK-KATLWMQNVSIYQLKQRPFMASLKTLQESPLKISSYRS 777
Query: 758 NKVFATYDVQQDTSIFF-TIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSF 816
N++ T ++Q++ + TIP KGW DGK + FM + + GK + +
Sbjct: 778 NRIVGTVNLQRNQRVLMTTIPAAKGWHVKVDGKPTTPQTVLNTFMAIPMSPGKHRVEFYY 837
Query: 817 IPNGFITGAICSFTSLLLFGIYNHRQKSSK 846
P I G I + SL L G + ++ K
Sbjct: 838 RPPFLILGLIITVLSLGLTGWWVKKEHQIK 867
>gi|68160770|gb|AAY86831.1| unknown integral membrane protein lr0888 [Lactobacillus reuteri]
Length = 871
Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats.
Identities = 215/871 (24%), Positives = 394/871 (45%), Gaps = 59/871 (6%)
Query: 14 SFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRN-ILHGNGSLFYTFTSG 72
SF++P+I+M + + I +S L D QYV F LRN ILH S FY+F+ G
Sbjct: 18 SFLLPVILMACYFAYRQITPFGKSSLLTVDLGQQYVDFFSYLRNTILHHPSSFFYSFSKG 77
Query: 73 LGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSIP 132
LG + ++YYL S L+ ++ FF ++ + + TL+++GL GLS + + K +
Sbjct: 78 LGGEMFGTNAYYLLSPLNLILLFFPAQHLATGITIVTLVRYGLAGLSFAWLMQK--TDLQ 135
Query: 133 NPLK-LALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSIL 191
+ LA ST Y++ + ++ W D IL+PLII GL LI + + Y L+++
Sbjct: 136 QGWRILAFSTVYSMNGWMIANQLNMIWQDALILLPLIIWGLLKLIYQNRVGTYIAWLAVM 195
Query: 192 FIQNYYFGYMTALFLIFWYLCQI----SWDFKTRKSSFLDFIITSVLAGMASLILILPTL 247
I NYY G+M A+F ++L Q SW + R FL ++ +S+LA S +++LPT
Sbjct: 196 LIDNYYMGWMIAIFTFLFFLWQTPALASW--RQRGVIFLRYLGSSLLAVGISAVILLPTF 253
Query: 248 FDLQTHGEKLTEVTKFQTESSWYL-DLFAKQFIGSFDTTKY-GAIPMIFVGLLPFILTIL 305
+ L TE TK + ++ + K GSF+ + P I++G+L + L
Sbjct: 254 YALMQSKGIYTE-TKIHSRFEYFAPKMLGKLVPGSFNFNQMPSGQPNIYIGMLLMLGACL 312
Query: 306 FFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTA 365
+F +LI A F I SF E LDL W P + +R++++FS IY A
Sbjct: 313 YFFNNRFDLRRRLIGAAISIFFIFSFCYEPLDLLWHAGQFPVWYPYRFSYLFSFWCIYLA 372
Query: 366 AEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLA 425
A+VL +IK + L+ LI+ + L Y NI L + V L
Sbjct: 373 AKVLQPDFKIKKRSALILTLLIIAIYWYVGTLNLSYINSNQRNIGLCFSLIAVSCL---- 428
Query: 426 VIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMESFSTDI 485
I + S L+ L+ L + ++S++ + ++ I+ + S+ + A++ +
Sbjct: 429 CIPRTNSPRLYDALLVLLAVCDISMSGYTALNKIS----YVSQPEFGNYTIALDKSVKKL 484
Query: 486 GNQ---FTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRY 542
F R K +T +D + ++N F S + + +G + G + Y
Sbjct: 485 KKHDPSFYRVAKTFMRTKDDPFQADFNSGDHFGSTLEPPIPAFMGAIG-QPDGDGF-VTY 542
Query: 543 ANNSILADSLFGIQYNISDN--------PI-----DKYGFKDIYQKDNLALYENQFSLPI 589
N + ++D+L G +Y ++ P+ D Y + + + L EN +LPI
Sbjct: 543 TNGTQVSDALLGYKYTMNARNTSAGQALPLSGFRPDWYSYPLVGSTSAVNLRENPHALPI 602
Query: 590 AF-ASQFVYNDVKFNEHTLDNQASFLNQLAN-------VDFDYFSPILYEKTENTDDLIS 641
AF A+ + + + L+ Q+ LA F+ + + ++ +
Sbjct: 603 AFGANAAILHLQRTTMDPLNYQSQIFQTLAGRPTLHSLFAVQNFNSVKFNNVQSAKQITG 662
Query: 642 VTSSSN---EDAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKT-FTTDNA 697
+ A++Q + P N YL+ + + I +N++K T + T
Sbjct: 663 TIFRKQNLLKPASVQLEFIPPTNDSYYLT-----LGPNVEDNATITMNNKKFTQYDTFRN 717
Query: 698 FSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSK 757
N+ + ++ + +N+ + + ++ + Y+L + +++ ++E P+ +S+ +
Sbjct: 718 TVVINVAHDQKGQKVLVNLQLK-KATLWMQNVSIYQLKQRPFMASLKTLQESPLKISSYR 776
Query: 758 -NKVFATYDVQQDTSIFF-TIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLS 815
N++ T ++Q++ + TIP KGW DGK + FM + + GK +
Sbjct: 777 SNRIVGTVNLQRNQRVLMTTIPAAKGWHVKVDGKSTTPQTVLNTFMAIPMSPGKHRVEFY 836
Query: 816 FIPNGFITGAICSFTSLLLFGIYNHRQKSSK 846
+ P I G I + SL L G + ++ ++
Sbjct: 837 YRPPFLILGLIITVISLGLTGWWVKKEHQTR 867
>gi|154482541|ref|ZP_02024989.1| hypothetical protein EUBVEN_00208 [Eubacterium ventriosum ATCC
27560]
gi|149736566|gb|EDM52452.1| hypothetical protein EUBVEN_00208 [Eubacterium ventriosum ATCC
27560]
Length = 915
Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats.
Identities = 239/886 (26%), Positives = 384/886 (43%), Gaps = 101/886 (11%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
+K +F+ Y ++F++PI+ M+ VY + I+ D L D +HQY + L+ L
Sbjct: 10 IKDWFEKNKLYILAFVLPILSMLIVYYFKDIFPFGDQMYLRSDCYHQYTPYLEILQQKLK 69
Query: 61 GNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
GSLFYT+ G G+NF A+++YYL S L+ L + M D V +LK GL G S
Sbjct: 70 DGGSLFYTWEIGAGMNFMAVAAYYLTSPLNLLAIIWP-GYMADMVSFFIVLKMGLAGFSV 128
Query: 121 YFSLNKLF-----QSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQIL 175
+ L K F S+ + ALS +A S+ + WLD L+P I+ GL+ L
Sbjct: 129 CYYLTKRFGQKNISSVVFGMAYALSAYFAAFSWNI------MWLDCMWLLPFIVLGLEKL 182
Query: 176 ITKKKFLLYFTSLSILFIQNYYFGYMTALFLIFWYL---CQISWDFKTRKSS-----FLD 227
+ +KK +Y SL++ NYY G M +F I +++ C + +D K+ D
Sbjct: 183 VNEKKCKMYCISLALAIFSNYYIGLMICIFSIIYFVYLFCIVEFDETVEKTKARLLILKD 242
Query: 228 FIITSVLAGMASLILILPTLFDLQT--HGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTT 285
+ I S+L G + +ILP F L T + T +T S Y+ +F
Sbjct: 243 YAIYSILGGALAACVILPEYFSLLTTKSADSSFPTTLEETVSMLYM-IFRSLICVPVADL 301
Query: 286 KYGAIPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHT 345
KY P I+ + FIL LF+ K I ++ + ++ SF + + W G H
Sbjct: 302 KYYPEPNIYCSVAIFILIPLFWMCKKINVKERIGKTVIALIMLLSFGLNIPAYIWHGFHF 361
Query: 346 PNMFLHRYAWIFSTLLIYTAAEVLNRLKEIK----IWNFLVSLFLIVTGFLATIYLKSHY 401
PN R ++++ L++ E ++E + W S+ L+ FL K
Sbjct: 362 PNSLPCRQSFLYIFLILTMCYEAFLYIREYEPKHIAWATGGSVALV---FLLDQLFKDA- 417
Query: 402 SFLTDLN--------ILLTLEFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNAS 453
S +DL I +L F+VVY+ L++ K + L+ L + E++LN +
Sbjct: 418 SIFSDLEIETSIVKIIYFSLLFIVVYACLIVWYKKAPKLKPFLSYLMVLIVFCELTLNMN 477
Query: 454 SQMDGIAKEWG----FASRSSYNR--DIPAMESFSTDIGNQFTRTEKLQTQTGNDSMKFN 507
+ GI G + + +Y++ +I ++ S ++ ++ RTE T ND +FN
Sbjct: 478 --VTGIPSTSGRKGYYEATKAYDQLNNITKKDADSQNV--KYYRTESAVHTTRNDGARFN 533
Query: 508 YNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQY---------- 557
YN IS FSSV + + D +G ++S + Y ++ L SLF I+Y
Sbjct: 534 YNSISTFSSVLSANIQDYFDSMGLQTSYNACS--YYGHTPLTASLFSIKYEYSTGEPSLP 591
Query: 558 ------NISDNPIDKYGFKDIYQKDNLALYENQFSLPIAF----ASQFVYNDVKFNEHTL 607
N + ++ G +Y YE +LP+ F +S N + T+
Sbjct: 592 NNVSLLNSASYNLESGGNSTVYA------YEYNNTLPLGFLINSSSIAKMNSEAGDPFTM 645
Query: 608 DNQASFLNQLANVDFDYFSPILYEKTENTDDLISVTSSSNEDAAIQYQIEV------PEN 661
N +F+ N F + KT+ T+ + + + D A + +V E
Sbjct: 646 QN--NFVTSAVNGGQMIFHRL---KTDGTNSITAQYNLEENDTANKNGTKVYDVYFYCET 700
Query: 662 SQVYLSFTNLHFS-NDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPG 720
S L+ T + S DK + S KTF + N +LG E T +I+ S
Sbjct: 701 SAETLTATVSNGSIQDKSFVSSSVTTSTSKTFNSANQNYICHLGNVPEGATISISAS--- 757
Query: 721 NSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVST-SKNKVFATYDVQQDTSIFFTIPYD 779
+ + Y D + P V++ S K+ T + ++ +IPYD
Sbjct: 758 -DNTAISAMYAYAFDETAWEYDYNLLNANPYQVTSFSDTKIEGTLTTDKGNLLYTSIPYD 816
Query: 780 KGWSAYQDGKKIEI----KQAQTGFMKVDVPKGKGTITLSFIPNGF 821
KGWS Y DG+K K A TG M V G IT + P GF
Sbjct: 817 KGWSVYVDGQKANTTAICKGALTGVM---VTAGTHQITFKYTPRGF 859
>gi|116333640|ref|YP_795167.1| Predicted membrane protein [Lactobacillus brevis ATCC 367]
gi|116098987|gb|ABJ64136.1| Predicted membrane protein [Lactobacillus brevis ATCC 367]
Length = 876
Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats.
Identities = 227/878 (25%), Positives = 396/878 (45%), Gaps = 80/878 (9%)
Query: 10 TYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRN-ILHGNGSLFYT 68
T + +F++P I+M G ++ + + +S L D QY+ F LR ILH S+FY+
Sbjct: 16 TLWGAFLVPFILMTGYFIYRQMAPFGTSSLLTVDLGQQYIDFFAYLRRAILHDPSSIFYS 75
Query: 69 FTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLF 128
F++G+G SYYL S L+ L+ T++ V+L T+ K+GL GLS + L K
Sbjct: 76 FSNGIGGEMLGTWSYYLLSPLNWLLLLCPGTSLTTGVFLLTVFKYGLAGLSFAWLLEKTT 135
Query: 129 QSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSL 188
Q + +T+YALM ++V+ WLD L+PLI GL L+ K+ Y L
Sbjct: 136 QQ-RGFKAIMFATAYALMGWSVANQLNVMWLDAAYLLPLIFYGLYQLMHTGKWRTYVIWL 194
Query: 189 SILFIQNYYFGYMTALFLIFWYLCQISWD-FKTRK---SSFLDFIITSVLAGMASLILIL 244
+++ + NYY YM LF++ + C ++ D F T + F++ S ++G+ S ++L
Sbjct: 195 TLMLVVNYYMAYMICLFMVLAF-CWLAVDRFSTWRHFGKQAGKFVLASAISGLLSAFILL 253
Query: 245 PTLFDLQTHGEKLTEVTKFQTESSWYLDLF-----AKQFIGSFDTTKY-GAIPMIFVGLL 298
PT + L + T VT F+ W+ D F AK F+G+F+ + +F+G +
Sbjct: 254 PTWWSLSQSKAQYT-VTTFK----WHFDFFPPKMLAKFFLGAFNFDQMPDGTANLFIGAI 308
Query: 299 PFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFS 358
+ ++ +F+ + IK ++ I FL S + LDL W P + +R+++I S
Sbjct: 309 ALLGSLFYFSDRRIKLRTRIASGILTAFLALSLCFQPLDLLWHAGQFPVWYPYRFSFIVS 368
Query: 359 TLLIYTAAEVLNR-LKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLV 417
LI+ AA+ L + + LV+L +I I L + + FLT +LL L F++
Sbjct: 369 FWLIWLAAQTLTADFQPGWLAISLVTLIVIAGSAYVGINL-AKFKFLTLNQLLLGLLFVI 427
Query: 418 VYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPA 477
+ L+ IK L ++I + E++ NA ++ I+ + S+S Y
Sbjct: 428 LALALITLPIKHHWIYPLTFLVIGV---TEVTANAFISLNNIS----YVSQSEYGNYTNE 480
Query: 478 MESFSTDIGNQ---FTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSS 534
++ + + F R K +T D+ + YNG FSSV ++ + +G
Sbjct: 481 LQRLVNRVQKRDHGFYRIGKTFLRTKGDAFQTGYNGGGVFSSVLPKAVPTFFGNIG-NPD 539
Query: 535 GTNLNLRYANNSILADSLFGIQYNI-----------------SDNPIDKYGFKDIYQKDN 577
G + Y+N +++ DSL ++Y S N D ++ I
Sbjct: 540 GDGF-VEYSNGTLVTDSLLNMKYYFQQNQLAGALSGTSILPASSNKADLADYQKISSDHW 598
Query: 578 LALYENQFSLPIAFASQFVYNDVKFNEHTLDNQASFLNQLANVDFDYFSPILYEKTENTD 637
Y+NQ++LP+ +A+ + T D N LA + + LY EN D
Sbjct: 599 ATTYKNQYALPMGYAAN--QQILTLKNKTADPTQYQANWLAALTGNSQDKQLY-TAENFD 655
Query: 638 DLI--SVTSSSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTD 695
+ ++ + A+ + + + ++ L+FT D + T D
Sbjct: 656 QVTFQNINQQTKITGAVLQKKNLLKPGKITLTFT--------PTTNDAYYFTFGSTVNPD 707
Query: 696 NAFSFFNLGYTKEKKTF--NINVSFPGNSQ--------------VSFESPTFYRLDTQTL 739
NA N + KT+ I VS +++ + ++ T YRL+T
Sbjct: 708 NATFILNGKTLNQYKTYRNTILVSAADHAKGHQQKVTIQLSKGSLWLDNFTLYRLNTPRF 767
Query: 740 TEAIQKIKEQPVTVSTSKNKVF-ATYDVQQDTSIFFT-IPYDKGWSAYQDGKKIEIKQAQ 797
AI ++K QP ++T ++ F T + + T IPY +GW A +G ++ +
Sbjct: 768 QAAINQLKTQPWHLTTHTSRYFKGTITSKHAGQVLNTSIPYSQGWHATVNGHAVKTYKTI 827
Query: 798 TGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLF 835
F V +PKG T+TL++ P G + S + ++
Sbjct: 828 GMFTAVKLPKGNSTVTLAYWPPLLNVGLLISGGTFIIL 865
>gi|116492494|ref|YP_804229.1| Predicted membrane protein [Pediococcus pentosaceus ATCC 25745]
gi|116102644|gb|ABJ67787.1| Predicted membrane protein [Pediococcus pentosaceus ATCC 25745]
Length = 871
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 219/880 (24%), Positives = 402/880 (45%), Gaps = 58/880 (6%)
Query: 4 FFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGN- 62
F K + +S IP IM+ ++ +G +S L D QYV F R+ L +
Sbjct: 3 FIKKHQNLILSGCIPACIMLAYFVYRGFAPFGTSSLLTVDMGQQYVAFYEYFRSTLISHP 62
Query: 63 GSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYF 122
G FY+F++GLG + + +YYL S + L+ FF ++ + + T+LK+ L GL++
Sbjct: 63 GQFFYSFSNGLGGDMFGTWAYYLFSPTNLLLLFFKKESITSGILVITVLKYALAGLTSAI 122
Query: 123 SLNKLFQ----SIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITK 178
L L Q + P + +T+Y+LM+F+++ WLD IL+PLII GL LI +
Sbjct: 123 YLQHLAQKNKITTPRASVVGFATAYSLMAFSIANQLNLFWLDAPILLPLIILGLDALIDQ 182
Query: 179 KKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQ---ISWDFKTRKSSFLDFIITSVLA 235
+ ++ T++S++ I NYYF YM +F + ++L + +SW ++ + +
Sbjct: 183 NQIKIFVTTMSLMVIINYYFAYMIGIFTLIYFLWRASPLSW------KKIFHYVQSWIYV 236
Query: 236 GMASLILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYG-AIPMIF 294
+ S I +PTL+ L + TE + + + L + K G+F + +P I+
Sbjct: 237 LVFSAIAWMPTLWALLHGKAQYTENSIKWSFAYTPLKMLTKLMPGTFSFKQMSDGLPNIY 296
Query: 295 VGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYA 354
VG+ + + +F K+I +L + F + SF L+LFW M P + +R++
Sbjct: 297 VGMFVLMAFVAYFFNKNIGLKRRLGALLITAFFLLSFCFTPLNLFWHAMQFPWWYAYRFS 356
Query: 355 WIFSTLLIYTAAE-VLNRLKEIKIWNFLVSLFLI-VTGFLATIYLKSHYSFLTDLNILLT 412
+IFS ++ A E +L+ ++E + + L LI + +++T L F+T+ I
Sbjct: 357 FIFSFWVLILAFEGLLHPIQEALLKPIIAGLALISLVAYISTKNLPKISDFMTENQIQFG 416
Query: 413 LEFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIA--KEWGFASRSS 470
+ + + + K + L IL+ F+ +++S+NA ++ I+ + FA SS
Sbjct: 417 VIIFIAALVFWVGFQAKDFNPGLTPILVC-FMALDLSVNAIWSLNRISYVSQTEFAQYSS 475
Query: 471 YNRDIPAMESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLG 530
R+ A++ D G+ F+R ++T ND ++ +N S F+S + + LG
Sbjct: 476 AARN--AIDQIK-DQGHHFSRIGTNYSRTKNDPIQLGFNSGSSFNSNLETNMLDMMSALG 532
Query: 531 FKSSGTNLNLRYANNSILADSLFGIQY-NISDNPIDKYGF----------KDIYQKDNLA 579
T+ N+ Y N ++++D+L +Y + +N D F K +Q N
Sbjct: 533 --QPTTSGNVTYMNGTLISDALLNFKYWSFVNNETDHNPFSTKSVRHDVLKRYHQIGNTK 590
Query: 580 L---YENQFSLPIAFASQFVYNDVKFNEHTLDNQASFLNQLANVDFDYFSPILYE----- 631
Y NQ++LP+ + ++ K + L Q++ L +++N + F+ I +
Sbjct: 591 YADNYLNQYALPLGLTTTHPVSNTKKIGNPLQYQSNLLKKISNHSQNLFTDITNQAQIYF 650
Query: 632 ----KTENTDDLISVTSSSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNS 687
T N + + N+ A + ++ E N+ +Y++ S+D DI VN+
Sbjct: 651 SNVTSTPNIKNGLLTKQKLNKAATVTFEYEPKNNNPIYIT-AGSQLSHD---NADIFVNN 706
Query: 688 EKKTFTTD-NAFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKI 746
++ T D + ++ + K I + S + + L T + Q
Sbjct: 707 QRITEDLDYDQPIVLSIADQMKGKKVRIQIVLKKQSLL-LSDFSVAELHYGTFKQDYQAA 765
Query: 747 KEQPVT-VSTSKNKVFATYDVQQDTSIFFT-IPYDKGWSAYQDGKKIEIKQAQTGFM--K 802
K +T V + N V +V D FT IPY GW DGK I + F+
Sbjct: 766 KTNSLTQVKNAGNVVTGNLNVNSDKPYLFTSIPYSSGWHIKIDGKTIPTSKVGNYFLGSN 825
Query: 803 VDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGIYNHRQ 842
V + GK I ++IP F+ G + L+ + ++
Sbjct: 826 VKLTSGKHQIKFTYIPPFFMLGMSITIIGFLMLVLLQQKK 865
>gi|116495144|ref|YP_806878.1| Predicted membrane protein [Lactobacillus casei ATCC 334]
gi|116105294|gb|ABJ70436.1| Predicted membrane protein [Lactobacillus casei ATCC 334]
Length = 868
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 221/870 (25%), Positives = 374/870 (42%), Gaps = 82/870 (9%)
Query: 13 VSFIIPIIIMIGVYLS-QGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGN-GSLFYTFT 70
+SF++P + ++G+Y + +G + +S L D QY+ F LR L G+ G LFY F
Sbjct: 13 LSFLLPGL-LVGLYFAIRGTFPFGSSSVLTVDLGQQYIDFFAYLRQTLLGHPGQLFYAFN 71
Query: 71 SGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQS 130
LG + Y + +YYL S + LV F + A +L T+LK IG + + + +
Sbjct: 72 KALGGDMYGVFAYYLLSPFNWLVVLFPADMLDVAAFLITVLKISTIGFTMGWYAKR--HA 129
Query: 131 IPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSI 190
I + A +YAL + ++ WLD +L+PLII + IL + + Y L+
Sbjct: 130 IHGMMIPAFGLAYALSGWLLANSFNLMWLDAAMLLPLIIDSVDILFKGGRVMAYIGWLAA 189
Query: 191 LFIQNYYFGYMTALFL----IFWYLCQIS-WDFKTRKSSFLDFIITSVLAGMASLILILP 245
I N+Y GYM ALFL I+W + S W R S L F+ S LAGM S +++LP
Sbjct: 190 ALIINFYTGYMIALFLILYAIYWLIAHTSTWQHFWR--SGLRFVGASGLAGMISAVVLLP 247
Query: 246 TLFDLQTHGEKLTEVT---KFQTESSWYLDLFAKQFIGSFDTTKY-GAIPMIFVGLLPFI 301
T F L T T +F+ + +L +K GSF+ + P ++G L F+
Sbjct: 248 TWFQLSQSKGTYTVATIRWRFEYAPTRFL---SKMLPGSFNFDQMPSGYPNYYIGALGFV 304
Query: 302 LTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLL 361
L +LFF KS + KL A LI S +E LDL W G P + +R+ ++
Sbjct: 305 LVVLFFLSKSHPWRQKLAAAGVTIVLILSCMLEPLDLLWHGFQFPVWYPYRFTFVLCFWF 364
Query: 362 IYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLK-SHYSFLTDLNILLTLEFLVVYS 420
+ VL L+ +L L L+ + + H+SFLT ++L L++
Sbjct: 365 LSLGIAVLPHLQIGIPLQWLGVLLLVFSAIYIDVAANLKHFSFLTVGHLLFGAGCLLLAF 424
Query: 421 LLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMES 480
+ ++ + +LI L + ++LN + + + S Y+ A+
Sbjct: 425 VWFSLDNRRPVWFGFAIVLIDLSGSLILTLN----------QLAYLNHSDYHDYTAALIR 474
Query: 481 FSTDIGNQ---FTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTN 537
+ I R K +T ND M NY G QF+S+ + +LG +
Sbjct: 475 GTQTIQQHDPGLFRIGKTTIRTRNDPMTANYLGADQFNSMLEPAVPKFFGQLG--QPEDD 532
Query: 538 LNLRYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALY------------ENQF 585
++ Y N +++ DSL G++Y ++ D Q+ +L Y + F
Sbjct: 533 GSVAYTNGTLITDSLLGMKYYLTPTKRAAKKLPDAGQRPDLKWYRPIKTTPTWQILRSPF 592
Query: 586 SLPIAF-ASQFVYNDVKFNEHTLDNQASFLNQ-LANVDFDYFSPILYEKTENTDDLISVT 643
+ + F A + ++E L NQ+ L L YF+P E + T T
Sbjct: 593 AQSLGFVADTDLLKQPLYSETPLANQSLILQSALGKSGSPYFTPTALEAPQLTGVRRVST 652
Query: 644 SSSNEDAA-------IQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDN 696
S+ A + Y+ + P ++Y+ F++ + +N +T T +
Sbjct: 653 GSAPTYAKVGHGPHDVTYRFK-PIPGKIYVLTLGSQFADHL-----VTLNQNGQTVTLPD 706
Query: 697 AFSFFNLGYTKEKKTFNINVSFPGNSQVS----------FESPTFYRLDTQTLTEAIQKI 746
+F+ + T N+ P QV FE+ Y+ D + + ++K+
Sbjct: 707 SFN--------DTITVNVTPRNPKAEQVLRFRLNKKDAWFENFDLYQADAKQVIHDLKKL 758
Query: 747 KEQPV-TVSTSKNKVFATYDVQQDTSIF-FTIPYDKGWSAYQDGKKIEIKQAQTGFMKVD 804
+ + + V AT ++ D + TIP GW D + + +K++ FM V
Sbjct: 759 QTGSWHVIQHTATTVEATINILHDHQMLQTTIPTAPGWHVKIDNRPVTVKKSLGIFMAVP 818
Query: 805 VPKGKGTITLSFIPNGFITGAICSFTSLLL 834
+ G+ IT+ ++P GA+ + T L L
Sbjct: 819 LKPGQHVITMRYVPPLLGWGAVITVTGLCL 848
>gi|42518371|ref|NP_964301.1| hypothetical protein LJ0284 [Lactobacillus johnsonii NCC 533]
gi|41582656|gb|AAS08267.1| hypothetical protein LJ_0284 [Lactobacillus johnsonii NCC 533]
Length = 880
Score = 189 bits (479), Expect = 9e-46, Method: Composition-based stats.
Identities = 202/846 (23%), Positives = 368/846 (43%), Gaps = 67/846 (7%)
Query: 42 GDGFHQYVIFDIALRNILHGN-GSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTN 100
GD +Y+ F LR ++ GN SL ++F +GLG + YYL S + L+ F +
Sbjct: 46 GDLPDEYLSFFQYLRRLILGNWSSLQFSFANGLGADMAGNIGYYLASPFNLLILLFPASQ 105
Query: 101 MPDAVYLTTLLKFGLIGLSTYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLD 160
+ A+Y+ ++K GL + F + F + L Y L + + WLD
Sbjct: 106 INLALYVIIIIKLGLASAAFTFLILNFFNFKNQIYSVFLGIIYGLSGYCIGYGANLMWLD 165
Query: 161 VFILIPLIITGLQILITKKKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKT 220
IL+PLII L + K+ + LY L+ I NYY GYM +F++ + +FK
Sbjct: 166 GVILLPLIIYALIKGLVKRHWTLYIVLLACAIIFNYYIGYMICIFMVIAFCAYTINNFKD 225
Query: 221 RK---SSFLDFIITSVLAGMASLILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQ 277
+K +DF+I+S+++G+ S ++ LPT +L + K E T + + AK
Sbjct: 226 KKIFIQQIIDFVISSLISGLISAVITLPTWMNLSNN--KFAEHTINEGFRLSPVSSIAKS 283
Query: 278 FIGSFDTTKYGAIPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLD 337
F + P++F+G L I+ IL+F ++I + + S +
Sbjct: 284 ISALFMKNTFNGSPLLFIGTLAIIIFILYFIDNKNSKKERIINLVIGLVFLLSLVQTKIY 343
Query: 338 LFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYL 397
LFW G P F +R+++I ++ AA+ L K L S V G L T+ L
Sbjct: 344 LFWHGGQKPVGFPYRFSFIIIFWILLLAAKELAGFDLKKKQLLLASGIYFVVGLLVTV-L 402
Query: 398 KSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMD 457
+ HY D+ +L++L ++++S+LL F F ++ + +VE+++++ +D
Sbjct: 403 RLHYG-KYDMYMLVSLGLIILFSILLY-----FSDHKSFRFVLVMVGVVEIAISSYLMLD 456
Query: 458 GIAKEWG-FASRSSYNRD----IPAMESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNGIS 512
I +++ + N++ +PA N F ++ +S FNY G
Sbjct: 457 RIGMRSNIYSNYVTENQELFDHLPASVKSKRIAKNYFLNNDR------GESYAFNYKGAE 510
Query: 513 QFSSVRNRSASSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNISDNPID------- 565
FSS + S LG + G Y +++ D++F I I DN +
Sbjct: 511 IFSSNNDPKISKLYANLGLSAYG--YYYFYKTGTVVTDAIFNIGGFI-DNSLPSQSISPE 567
Query: 566 --KYGFKDIYQKDNLALYENQF------SLPIAFASQFVYNDVKF-NEHTLDNQASFLNQ 616
YG +D + + + L E Q+ +LP+ FA + N++KF ++ + NQ LN
Sbjct: 568 YISYGLRDDLKNNPILLKEKQYTAYRTDTLPLVFAGN-LSNNLKFKSDDPVYNQNLVLNS 626
Query: 617 LANVDFDY--FSP------ILYEKTENTDDLISVTSSSNEDAAIQYQIE-VPENSQVYLS 667
L + +SP + K +VT +S+++ ++ + + + Y+
Sbjct: 627 LTQTQGNVLTYSPKVAKIKVTDSKLNQEKKKFTVTRTSDKEGSVTFTFDGLKPKETAYVQ 686
Query: 668 F-----------TNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINV 716
F T H S D K ++ + KK +K I
Sbjct: 687 FGKDLMGFADPLTTYHASQDGNNKPELSITVNKKDVRLQPQVKQLIGVRANQKGQVQIKW 746
Query: 717 SFPGNSQV-SFESPTFYRLDTQTLTEAIQKI--KEQPVTVSTSKNKVFATYDVQQDTSIF 773
S GN ++ + E P +++ L + ++ K+Q + N + + ++ ++
Sbjct: 747 SLAGNKRILTSEMPRLVNINSTLLRSKVSQVNNKKQMHLTTFRDNYLSGKINTTKNENLV 806
Query: 774 FTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLL 833
TIPY +GW DGK I++ + F+ +++ GK T+ + + G + G I S ++
Sbjct: 807 TTIPYSRGWKVKVDGKPIKVSRTLDVFIGLNMKPGKHTVVMRYRTPGLLIGVITSIIGII 866
Query: 834 LFGIYN 839
L ++N
Sbjct: 867 LLVVFN 872
>gi|156864698|gb|EDO58129.1| hypothetical protein CLOL250_01267 [Clostridium sp. L2-50]
Length = 1060
Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 212/876 (24%), Positives = 382/876 (43%), Gaps = 61/876 (6%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
+++F + + ++ +IP ++GV++++ I S + D HQY+ F + L
Sbjct: 140 IRIFMRRNYLILLAGVIPACFLLGVWIAEKIGPFGGNSLTMVDSLHQYLPFFSDYYDKLK 199
Query: 61 GNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST 120
GSLFYT+ GLG N A+ +YY+ ++ LV F ++ A+ L +K L G+S
Sbjct: 200 NEGSLFYTWDIGLGSNMLAIIAYYIACPINFLVVLFKREHIYIAMSLFIGIKIVLSGMSF 259
Query: 121 YFSLNKLFQSIP--NPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITK 178
+ + + ++ + L ST+YA+ ++ + W+D +++PLI+ G + +
Sbjct: 260 AYYMREKCRNYKTYDAAILIFSTAYAISNYVIGYSWNLMWMDCIMILPLIMAGFERMTES 319
Query: 179 KKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLD---FIITSVLA 235
+ LY SL + NYY +M +FL+ +L + K+ K F D F S+LA
Sbjct: 320 GDYKLYVLSLFYALMCNYYMSFMICIFLVMVFLLT---NHKSVKRFFTDGFRFAGCSLLA 376
Query: 236 GMASLILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTK------YGA 289
S L++P L T K++ WY ++ Q F TK +
Sbjct: 377 AGMSAFLLIPAYLGLNTTASATRVFPKWE----WYGSIW-DQIKQLFYLTKPIKNQQFDG 431
Query: 290 IPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMF 349
I+ G + F+L ++ ++IK K+ I + ASF ++L+ W G H
Sbjct: 432 GLNIYCGTICFVLVFVYLFNRNIKLWDKIKNVIILVVIFASFNNKLLNYIWHGFHDQYGI 491
Query: 350 LHRYAWIFSTLLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNI 409
+R++++F L++ EVL L + + L+++ GFL Y K T +
Sbjct: 492 PNRFSFLFIFLMLAMCCEVLLLLDKKDTFAVLLAV-AFGYGFLILSYKKCTIERQT---L 547
Query: 410 LLTLEFLVVYSLLLLA-VIKKFISVNLFAILISLFIMVEMSLNASSQMDG---IAKEWGF 465
+ T FL VY+LL+LA + K + L ++++ +VE N D + F
Sbjct: 548 IWTEIFLTVYALLILAFTLTKGVWRKLVIYVLTIACLVETVTNGIKGYDSNGYVDISQYF 607
Query: 466 ASRSSYNRDIPAMESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASST 525
SS N+ I + D ++ R E + T+ ++ +N + F S +
Sbjct: 608 GMESSMNQAIDTL-----DCKDKAYRVELMNTKIVDEPTYYNLKSVCLFGSTVSADLVDM 662
Query: 526 LDKLGFKSSGTNLNLRYANNSILADSLFGIQYNIS-DNPIDKYGFKDIYQKDNLALYENQ 584
+ LG+ +G N L N+ L++SL ++Y + + + + + D + +YEN
Sbjct: 663 MHDLGY-YTGANEFLFDGGNT-LSNSLLRVRYLLQREGEYNYFDVNYVTDVDGVNIYENP 720
Query: 585 FSLPIAFASQFVYNDVKFNEHTLDNQASFLNQLANVD------FDYFSPILYEKTEN--- 635
++L + + V ND+ + T+ N LNQ + F P + ++N
Sbjct: 721 YALSLGY---MVNNDLLDYDGTIGNMFDTLNQFVKLSTGVPGVFSQLYPEVTMYSDNCEL 777
Query: 636 -----TDDLISVTSSSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKK 690
T + S T + N Q +V + S N N KV I V+ E++
Sbjct: 778 SHDSDTSEYYSYTRTDNSKCDFQLSFDVTDESADIYILANSSGIN----KVRIYVDGEEQ 833
Query: 691 TFTTDNAFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFY--RLDTQTLTEAIQKIKE 748
+ ++ ++G+ + +T + F +SQ + S + + +A +
Sbjct: 834 NYERLQNQTY-HVGHLVQGQTVTVEYCFQ-SSQANSGSARLVVSSFNWDSFLQAYDILSA 891
Query: 749 QPVTVSTSKNKVFATYDVQQDTSIFFT-IPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPK 807
Q + V ++ Y + FT IPYDKGW+AY DGKK EI F+ + +
Sbjct: 892 QQMLVGKMEDGYVKGYMTIDYPGLLFTSIPYDKGWTAYVDGKKYEIDTVGNAFIALKLAA 951
Query: 808 GKGTITLSFIPNGFITGAICSFTSLLLFGIYNHRQK 843
G+ I + P G G I +F +LFG R +
Sbjct: 952 GEHVIEFRYFPPGLKLGLILTFACWILFGFLCGRTQ 987
>gi|116617591|ref|YP_817962.1| Predicted membrane protein [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116096438|gb|ABJ61589.1| Predicted membrane protein [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 869
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 213/849 (25%), Positives = 368/849 (43%), Gaps = 56/849 (6%)
Query: 13 VSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALR-NILHGNGSLFYTFTS 71
+SF IP +++IG + + + S L D QY+ A + IL S FY+F++
Sbjct: 15 LSFWIPFLVLIGYFAYRKMAPFGSNSILTVDLGQQYIDQFAAFKYTILQHPSSFFYSFSN 74
Query: 72 GLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSI 131
LG + +YYL S + + F N+P A+ L LK GLS + L KL
Sbjct: 75 ALGGDMLGEWAYYLMSPFNFIFLFVSNANLPAAILLVICLKISAAGLSMGYLLKKLHLQH 134
Query: 132 PNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSIL 191
+ L + ++AL + V+ WLD +++PL+I L+ + ++ + Y L+I
Sbjct: 135 GYYITL-FAINFALSGWFVANNLNLLWLDTAVMLPLVIYQLEQVFYRQTWWRYSVLLAIT 193
Query: 192 FIQNYYFGYMTALFLIFWYLCQISW-DFKTRKSSFLDFIITSVLAGMASLILILPTLFDL 250
I NYY G+M A+F++ ++L +++W + K R + F + S++ G S LILPT F L
Sbjct: 194 IITNYYIGFMVAIFIVLYFLWRLTWPNVKHRLTILWHFALGSIIGGALSAWLILPTYFQL 253
Query: 251 QTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKY-GAIPMIFVGLLPFILTILFFTL 309
+ F+ +++ L LF K GSFD + +V I + F T
Sbjct: 254 TLGKSQYNSEFSFKFDNN-PLHLFLKLIPGSFDFDQMQSGQANFYVSAFILITLVTFITT 312
Query: 310 KSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVL 369
+ I + VK+ +FLI + L L + G P + +R++++ S +IY AA
Sbjct: 313 RVIHWRVKVGAFAILSFLILATTWAPLTLLFHGFQYPVWYPYRFSFLISFFVIYLAAMSW 372
Query: 370 N---RLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAV 426
R ++I LV LF+ + G ++ + + TD N ++ + +LL LA
Sbjct: 373 QPTWRPQKIT----LVLLFVSLVGVAVYAFINNQKTSYTDSN---SIAIFIGLALLTLAQ 425
Query: 427 IKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMESFSTDIG 486
++ ++SL +V + N + ++ + + + + Y I A+ + I
Sbjct: 426 FTFKSHDRIWLPILSLITIVSLGANVALTLN----HFSYLTNTEYQNAIHALTDANQKIK 481
Query: 487 NQFTRTEKLQT--QTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYAN 544
+ QT +T DSM NY G + FSS ++ + G + G N + Y+N
Sbjct: 482 KDRSWYRVAQTFQRTRGDSMMLNYYGGAHFSSALPKATPTFFGNFG-QPDGDNY-VVYSN 539
Query: 545 NSILADSLFGIQYNISDNPIDK----------YGFKDIYQKDNLA-------LYENQFSL 587
S+L+D+ G++Y I+ N D GF+ +K NL +Y+N+ +L
Sbjct: 540 GSVLSDAFLGMKYFITANGKDNGDAGQPSQHLIGFRPDTKKYNLKATTKTTNVYQNKNAL 599
Query: 588 PIAF-ASQFVYNDVKFNEHTLDNQASFLNQL-----ANVDFDYFS-PILYEKTENTDDLI 640
P+AF AS N + L NQ + + + V D F I + T +
Sbjct: 600 PLAFAASSGALNTKMLFNNPLQNQGNLWQGITGTTTSTVHVDNFQKSIGHNITAPSMITG 659
Query: 641 SVTSSSN--EDAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKT-FTTDNA 697
S+ + N + A++ Q N YL+ S K D+L+N + T F T
Sbjct: 660 SIITRQNAAKPASLDLQFTPTNNDSYYLTIG----SGLDIKNFDLLINGKVITQFNTYRH 715
Query: 698 FSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVST-S 756
NL + K I ++ + T Y +D + + +K+ + +S S
Sbjct: 716 TVVVNLATNAKDKLQTITFRLKDTQTLALTNVTLYHIDNERIANDSTNLKQNGLKISKRS 775
Query: 757 KNKVFATYDVQQDTSIFF-TIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLS 815
+ ++ T + TIP GW DGK ++ + F+ V G I+
Sbjct: 776 QRRIEGTIKTTTKKPLVMTTIPSIPGWQVKVDGKTVKTTKVANYFIAVKTKPGLHKISFV 835
Query: 816 FIPNGFITG 824
+ P F G
Sbjct: 836 YTPPLFYYG 844
>gi|118586751|ref|ZP_01544188.1| integral membrane protein [Oenococcus oeni ATCC BAA-1163]
gi|118432839|gb|EAV39568.1| integral membrane protein [Oenococcus oeni ATCC BAA-1163]
Length = 880
Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 216/880 (24%), Positives = 391/880 (44%), Gaps = 72/880 (8%)
Query: 11 YFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYV-IFDIALRNILHGNGSLFYTF 69
YF+SF +P +IM+ + + + ++S L D QYV +F ILH LFY+F
Sbjct: 13 YFLSFALPALIMLFYFYYRKMAPFGNSSILTVDLGQQYVDMFSGMRETILHQPNQLFYSF 72
Query: 70 TSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST-YFSLNKLF 128
G ++ SYYL S L+ L+ FF+ N+P + T+++FGL GLS Y + + F
Sbjct: 73 AKNFGGEMFSEWSYYLFSPLNLLLLFFNQANLPSGILFLTVVRFGLAGLSMQYLLVRRNF 132
Query: 129 QSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSL 188
+ L +S+SYAL + V+ W D IL+PLII LI ++K+L +
Sbjct: 133 TG--KEMGLLISSSYALSGWFVANQVNLLWQDQIILLPLIIYAAIKLINEQKYLPFVLIF 190
Query: 189 SILFIQNYYFGYMTALFLIFWYLCQISW---DFKTRKSSFLDFIITSVLAGMASLILILP 245
+ I N+Y YM +FL + + QIS F + FL F+ + +L+ + S ++++P
Sbjct: 191 AFSIIDNFYIAYMIGIFLPMFAIWQISRYYSKFLNQSLIFLRFLSSMLLSVLISSVVLIP 250
Query: 246 TLFDL-QTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYG-AIPMIFVGLLPFILT 303
T F L Q G+ + YL + K GSF+ ++ + IFV + I
Sbjct: 251 TAFQLIQGKGQDTIASIDWGFIQKPYL-VILKLIPGSFNFSQMKTGLANIFVPFIIIIGL 309
Query: 304 ILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIY 363
I +F++K K K+I + SF + L++ + M P + +RY++IFS ++
Sbjct: 310 ITYFSIKQEKISTKIISGLIIALYSLSFVWQPLNILFHMMQYPVWYPYRYSFIFSFFILL 369
Query: 364 TAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLL 423
AA L + K +F++SL LI ++ +F+ + L + FL V S LL
Sbjct: 370 LAAIGLEKSKHANFPSFVLSLLLIAVISSVAVFFNKKINFVNSQQVRLFI-FLSV-SALL 427
Query: 424 LAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMESFST 483
+ +++ ++ +++A + L + +LNA + + + + S Y R + A++ ++
Sbjct: 428 VYMVRSYMKHDVWAYFLLLIGLTSSALNAYISTNNFS----YLTNSEYQRTVKALQQSTS 483
Query: 484 DIGNQ-FTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRY 542
D+ + F R + ++T D+ YNG FSS +++ G + Y
Sbjct: 484 DLSKKGFYRVGQTFSRTRGDAFATGYNGGMHFSSTVDKTTPELFGAFG--QVANDYYTSY 541
Query: 543 ANNSILADSLFGIQYNISDNPI-------------------DKYGFKDIYQKDNLALYEN 583
+ ++L D++F ++Y IS P+ D ++ + ++ + +N
Sbjct: 542 SFGTVLTDAIFDMKYFIS--PVYGGSNAAGSPKAMANSYRPDLTNYRLLQSRNQVMTIKN 599
Query: 584 QFSLPIAF-------ASQFVYNDVKFNEHTLDNQASFLNQL--ANVDFDYFSPILYEKTE 634
+ +LPI F S+ + + ++L + L +NV F Y TE
Sbjct: 600 KNALPIIFPTSSKVLKSKIIPENPILTSNSLWEGITGTKNLVQSNVPFSY-------STE 652
Query: 635 NTDDLISVTS------SSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSE 688
N LIS+ +S +DA I + N YL+ + F+N+ I VN E
Sbjct: 653 NIKTLISLNGQTAQKINSGQDAVINISFKPNTNGSYYLTLP-VSFANNATW---ITVNGE 708
Query: 689 KKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGN-SQVSFESPTFYRLDTQTLTEAIQKIK 747
N + L K I + N S++ Y ++ L ++ K++
Sbjct: 709 TIP-QYANRENVVALNVANHDKNLQITIGIHLNYSELFLNDLELYSINDSKLAKSANKVQ 767
Query: 748 EQPV-TVSTSKNKVFATYDVQQDTSIFF-TIPYDKGWSAYQDGKKIEIKQAQTGFMKVDV 805
+ + + ++ DV+++ I TIP GW DGK +K F+ +
Sbjct: 768 KTGIKNLKFNQTSFTGEVDVKKNQKILMTTIPAAPGWKIKIDGKNTPVKTIDNYFIGAKI 827
Query: 806 PKGKGTITLSFIPNGFITGAICSFTSLLLFGI--YNHRQK 843
+G+ + + + + + S+LL + N R+K
Sbjct: 828 KQGRHKVQIYYQEPYLGVASAITLISILLVTLIEINKRKK 867
>gi|116491242|ref|YP_810786.1| Predicted membrane protein [Oenococcus oeni PSU-1]
gi|116091967|gb|ABJ57121.1| Predicted membrane protein [Oenococcus oeni PSU-1]
Length = 880
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 215/880 (24%), Positives = 390/880 (44%), Gaps = 72/880 (8%)
Query: 11 YFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYV-IFDIALRNILHGNGSLFYTF 69
YF+SF +P +IM+ + + + ++S L D QYV +F ILH LFY+F
Sbjct: 13 YFLSFALPALIMLFYFYYRKMAPFGNSSILTVDLGQQYVDMFSGMRETILHQPNQLFYSF 72
Query: 70 TSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLST-YFSLNKLF 128
G ++ SYYL S L+ L+ FF+ N+P + T+++FGL GLS Y + + F
Sbjct: 73 AKNFGGEMFSEWSYYLFSPLNLLLLFFNQANLPSGILFLTVVRFGLAGLSMQYLLVRRNF 132
Query: 129 QSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSL 188
+ L +S+SYAL + V+ W D IL+PLII LI ++K+L +
Sbjct: 133 TG--KEMGLLISSSYALSGWFVANQVNLLWQDQIILLPLIIYAAIKLINEQKYLPFVLIF 190
Query: 189 SILFIQNYYFGYMTALFLIFWYLCQISW---DFKTRKSSFLDFIITSVLAGMASLILILP 245
+ I N+Y YM +FL + + QIS F + FL F+ + +L+ + S ++++P
Sbjct: 191 AFSIIDNFYIAYMIGIFLPMFAIWQISRYYSKFLNQSLIFLRFLSSMLLSVLISSVVLIP 250
Query: 246 TLFDL-QTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYG-AIPMIFVGLLPFILT 303
T F L Q G+ + YL + K GSF+ ++ + IFV + I
Sbjct: 251 TAFQLIQGKGQDTIASIDWGFIQKPYL-VILKLIPGSFNFSQMKTGLANIFVPFIIIIGL 309
Query: 304 ILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIY 363
I +F++K K K+I + SF + L++ + M P + +RY++IFS ++
Sbjct: 310 ITYFSIKQEKISTKIISGLIIALYSLSFVWQPLNILFHMMQYPVWYPYRYSFIFSFFILL 369
Query: 364 TAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLL 423
AA L + K +F++SL LI ++ +F+ + L + FL V S LL
Sbjct: 370 LAAIGLEKSKHANFPSFVLSLLLIAVISSVAVFFNKKINFVNSQQVRLFI-FLSV-SALL 427
Query: 424 LAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMESFST 483
+ +++ ++ +++A + L + +LNA + + + + S Y R + A++ ++
Sbjct: 428 VYMVRSYMKHDVWAYFLLLIGLTSSALNAYISTNNFS----YLTNSEYQRTVKALQQSTS 483
Query: 484 DIGNQ-FTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRY 542
D+ + F R + ++T D+ YNG FSS +++ G + Y
Sbjct: 484 DLSKKGFYRVGQTFSRTRGDAFATGYNGGMHFSSTVDKTTPELFGAFG--QVANDYYTSY 541
Query: 543 ANNSILADSLFGIQYNISDNPI-------------------DKYGFKDIYQKDNLALYEN 583
+ ++L D++F ++Y IS P+ D ++ + ++ + +N
Sbjct: 542 SFGTVLTDAIFDMKYFIS--PVYGGSNAAGSPKAMANSYRPDLTNYRLLQSRNQVMTIKN 599
Query: 584 QFSLPIAF-------ASQFVYNDVKFNEHTLDNQASFLNQL--ANVDFDYFSPILYEKTE 634
+ +LPI F S+ + + ++L + L +NV F Y TE
Sbjct: 600 KNALPIIFPTSSKVLKSKIIPENPILTSNSLWEGITGTKNLVQSNVPFSY-------STE 652
Query: 635 NTDDLISVTS------SSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSE 688
N IS+ +S +DA I + N YL+ + F+N+ I VN E
Sbjct: 653 NIKTPISLNGQTAQKINSGQDAVINISFKPNTNGSYYLTLP-VSFANNATW---ITVNGE 708
Query: 689 KKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGN-SQVSFESPTFYRLDTQTLTEAIQKIK 747
N + L K I + N S++ Y ++ L ++ K++
Sbjct: 709 TIP-QYANRENVVALNVANHDKNLQITIGIHLNYSELFLNDLELYSINDSKLAKSANKVQ 767
Query: 748 EQPV-TVSTSKNKVFATYDVQQDTSIFF-TIPYDKGWSAYQDGKKIEIKQAQTGFMKVDV 805
+ + + ++ DV+++ I TIP GW DGK +K F+ +
Sbjct: 768 KTGIKNLKFNQTSFTGEVDVKKNQKILMTTIPAAPGWKIKIDGKNTPVKTIDNYFIGAKI 827
Query: 806 PKGKGTITLSFIPNGFITGAICSFTSLLLFGI--YNHRQK 843
+G+ + + + + + S+LL + N R+K
Sbjct: 828 KQGRHKVQIYYQEPYLGVASAITLISILLVTLIEINKRKK 867
>gi|81428815|ref|YP_395815.1| Hypothetical membrane protein [Lactobacillus sakei subsp. sakei
23K]
gi|78610457|emb|CAI55507.1| Hypothetical membrane protein [Lactobacillus sakei subsp. sakei
23K]
Length = 847
Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 212/885 (23%), Positives = 377/885 (42%), Gaps = 85/885 (9%)
Query: 1 MKLFFKTYWTYF-VSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIAL-RNI 58
M+ +K +Y+ +SF +P+++++ + G+ + + L D QY+ F R +
Sbjct: 1 MQTKYKQALSYYGLSFGLPLVLVLIGFAMMGLVPFGNHNLLFSDLGTQYMPFLAEFKRQM 60
Query: 59 LHGNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGL 118
H N S Y+F+ LG N L++YYL S + L+ + +P + LK +G+
Sbjct: 61 AHFNFSA-YSFSLSLGGNLVPLAAYYLISPFNLLLLLGSNSQLPVMISYVIALKICTMGV 119
Query: 119 STYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITK 178
+ + L S + L ST+Y+L F WLD IL+PLI+ GL+ L +
Sbjct: 120 TMNYFLRTRTTSY-HYSALIFSTAYSLCGFVAMNFYNLMWLDALILVPLIVIGLERLFSV 178
Query: 179 KKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLC--------QISW--DFKTRKSSFLDF 228
KK LY +L++ + NYY GYMT LF + + + Q +W K + F
Sbjct: 179 KKPTLYIVTLTVSILTNYYLGYMTCLFAVLYMISLVIKQRQPQQTWLQLMKQQARVIWQF 238
Query: 229 IITSVLAGMASLILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAK-QFIGSFDTTKY 287
I +S++ G S I+++P L + G+K +T F + ++ + Q GS T +
Sbjct: 239 IWSSLIVGGLSAIILVPALLGMLKTGKKTIAMTSFYPTPQFGWEVLTQFQVGGSHYTQRL 298
Query: 288 GAIPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPN 347
P +FVG L + +L+FTL I+ K L SF++ + W P
Sbjct: 299 THEPTLFVGTLVLLFAVLYFTLPQIRKQAKYANGFLVLSLALSFWVTTFNTVWHMFQQPE 358
Query: 348 MFLHRYAWIFSTLLI---YTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFL 404
F +R A++FS +LI Y A+ V + K K+ ++ L+V G L S Y +
Sbjct: 359 GFPYRNAYLFSFVLIKLAYEASLVRGQNKRAKVRTIILIGGLLVMGQLK--LHSSQYPQI 416
Query: 405 TDLNILLTLEFLVVYSLLLL------AVIKKFISVNL----FAILISLFIMVEMSLNASS 454
+ LL + + LL +K + +++ F+ L++ F ++ +
Sbjct: 417 AQQSWLLLSGYTIFLGLLFYYWGQARQRYQKLVMISVALVSFSELVTNFQLMTQKMPLGY 476
Query: 455 QMDGIAKEWGFASRSSYNRDIPAMESFSTDIGNQ--FTRTEKLQTQTG-NDSMKFNYNGI 511
Q + S Y A F + NQ ++ + G ND++ F +
Sbjct: 477 QKQYAQQY--QRQASVYKHLSQADHDFYR-VNNQSILLKSAYREPYYGYNDALLFGQYTL 533
Query: 512 SQFSSVRNRSASSTLDKLGFKSSGTNLNLRYAN---NSILADSLFGIQYNISDNPIDKYG 568
+ +SS + S L LGF S N+R N ++ + D LF +Y
Sbjct: 534 NNYSSTLDEQMRSMLVDLGFYSK----NVRRINGVGHAAITDLLFANRY----------- 578
Query: 569 FKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEH-TLDNQASFLNQLANVDFDYFSP 627
D+ QK + + +L + FA DV +H DNQ L + N D ++
Sbjct: 579 --DLQQKKGQTIIQRHQTLGLGFAVNADLADVTLKKHRPFDNQDRLLQAMVNTDKPFYK- 635
Query: 628 ILYEKTENTDDLISVTSSSNEDAAIQ---YQIEVPENSQVYLSFTNLHFSNDKQKKVDIL 684
I + E+ Q Y +EVP +++ T L+ + ++ +
Sbjct: 636 ------------IHQVDTVREEVKAQRYCYTLEVPSDTK---GPTYLYLPHQDLTQIKLW 680
Query: 685 VNS-EKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGNSQVS-FESPTFYRLDTQTLTEA 742
VN +KKT N+ + L + + + V P ++S F+ T L+ + +A
Sbjct: 681 VNGRKKKTPIKVNSAAIIPLEDSHRGQPLRLTVISPKRQKISHFQVAT---LNQKRFDQA 737
Query: 743 IQKIKEQPVTVST---SKNKVFATYDVQQDTS-IFFTIPYDKGWSAYQDGKKIEIKQAQT 798
I+++ Q + + V D Q ++ ++PYD GW A + ++ K+
Sbjct: 738 IRQLSHQKLMTTALWRDNGHVEGRIDSQSAGQLLYLSLPYDAGWHAKINHHTVKPKKVMA 797
Query: 799 GFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGIYNHRQK 843
+ + + KG + L + G + G I S +L ++G+ + QK
Sbjct: 798 NMLALPLKKGTNDVQLRYYAPGLLIGQIISLVTLCIWGLVANWQK 842
>gi|116494607|ref|YP_806341.1| Predicted membrane protein [Lactobacillus casei ATCC 334]
gi|116104757|gb|ABJ69899.1| Predicted membrane protein [Lactobacillus casei ATCC 334]
Length = 887
Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats.
Identities = 224/888 (25%), Positives = 375/888 (42%), Gaps = 94/888 (10%)
Query: 6 KTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSL 65
+T+ +SF + I + V+ + + +S L D QYV F L++ L G
Sbjct: 8 RTWPLLLISFSMTFTISLIVFAALKMAPFGSSSILANDSAVQYVDFFTYLKHALMGTAGK 67
Query: 66 FYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTN---MPDAVYLTTLLKFGLIGLSTYF 122
Y+F++ LG YA +YYL LSP F L + +P A+ T LK+ L+
Sbjct: 68 AYSFSNSLGGGMYANWTYYL---LSPFNLIFVLVSRQAIPVAMLFVTALKYSTAALAAQV 124
Query: 123 SLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFL 182
+ + N L S SY L F ++ W+D IL+PL+I G+ L + + +
Sbjct: 125 LASHRYGK--NWYTLVFSVSYGLSGFLIANFLNIMWMDGVILLPLVILGIDRLFEEHRLI 182
Query: 183 LYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKT---RKSSFLDFIITSVLAGMAS 239
Y LS+ FI NYY G+M A+F ++ Q + + RK + F+ S+L+GM
Sbjct: 183 PYVVPLSLSFITNYYIGFMVAIFSALYFCWQWAIHHQPQLLRKIAL--FVGGSLLSGMIG 240
Query: 240 LILILPTLFDLQTHGEKLTEVTKFQTESSWY--LDLFAKQFIGSFDTTKYG-AIPMIFVG 296
I+++PT L +L+ T + +DL +K GSF+ + +P +++G
Sbjct: 241 AIVLIPTYLALS--ASRLSSAGADFTIKPLFSLIDLPSKLIPGSFNFAQLSNGLPNLYMG 298
Query: 297 LLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWI 356
++ + + +F +I +LI + L+ S ++ L + WQG P +L+R+++I
Sbjct: 299 MIALLGAVFYFLAPAISVRERLISGVMTVILMLSIWLNPLVIMWQGFRAPVWYLYRHSFI 358
Query: 357 FSTLLIYTAAEVLNRLKEIKIWNFLVSLFLIVTG--FLATIYLKSHYSFLTDLNILLTLE 414
L+ L L + +++ ++V G F+ T + S + ++T N++L
Sbjct: 359 VIFWLLLLGLRGLANLPSVSRLRMIIA-SVVVGGVVFIPTAWRMSSHKYVTLTNLVLGGV 417
Query: 415 FLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRD 474
L+V ++LL + + ++++M NA + + I+ F S++ +
Sbjct: 418 LLLVAAILLYSWAHHLFPQKWVVGGLLTLLVLDMGANAYTSLKAIS----FISKADFTVT 473
Query: 475 IPAMESFSTDIG----NQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLG 530
A+ + T+ N F R ++ +D ++N+NGIS FSSV N S + L +G
Sbjct: 474 SKALNAAYTEAKTLAPNTFYRVNSDTQRSMDDPYQYNFNGISTFSSVLNTSTINALTNVG 533
Query: 531 FKSSGTNLNLRYANNSIL--ADSLFG---------------------IQYNISDNP-IDK 566
S R NN + +SL G I I DNP D
Sbjct: 534 AIGSAG----RVKNNDLTWPLESLLGVRQLLLVNTQSTKTTTPEYQQISSRIIDNPRYDL 589
Query: 567 YGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEHTLDNQASFLNQLANVDFDYFS 626
+K I D +Y+N +LP+A +Y V T L Q N F F+
Sbjct: 590 PAYKLIGHNDYFNIYQNPDALPVATQ---IYRKVP----TQVQANPVLQQ--NAYFSTFT 640
Query: 627 PILYEKTENTDDLISVTS-------------SSNEDAAIQYQIEV---PENSQVYLSFTN 670
P T D +T ++ +D + I + P Q YL
Sbjct: 641 PETIGAIFTTTDFSGITVDNVKPLTTLTNAIATKKDKKLGATITLNVNPSTEQRYLV--- 697
Query: 671 LHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGN-SQVSFESP 729
+ +K + I +N+ DN +L EK T + ++F N Q+ +
Sbjct: 698 --MGENMRKNMAISINNVPLKNDPDNGSKTVSLPIDAEKPT-TVTLTFNRNVDQIDLDHF 754
Query: 730 TFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGK 789
Y L+ Q +A+ K+ V T I TIPY+KGW D K
Sbjct: 755 ALYTLNRQPFEQAVAAAKQHAPKQVVKNGSVTLTTRQNNSGYIMLTIPYEKGWQV--DNK 812
Query: 790 KIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 837
+++I Q GF+ + VP TLS+ G G I TSL L G+
Sbjct: 813 QVKI-QNYRGFIGLKVPSTSLKFTLSYHTPGIKAGWIV--TSLGLIGL 857
>gi|116630016|ref|YP_815188.1| Predicted membrane protein [Lactobacillus gasseri ATCC 33323]
gi|116095598|gb|ABJ60750.1| Predicted membrane protein [Lactobacillus gasseri ATCC 33323]
Length = 859
Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats.
Identities = 231/863 (26%), Positives = 397/863 (46%), Gaps = 67/863 (7%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
+K+ FK + Y++SF++P I + S IY N + L D QY+ F +N L
Sbjct: 6 IKIHFKNKYLYWLSFLLPACI----FASYFIYRNHEI--LTVDLGQQYIDFLAFYKNNLF 59
Query: 61 GNG-SLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLS 119
N + +TF+SGLG +F +YYL S + L+ F + +P+A+ L LK G IGLS
Sbjct: 60 SNPLNFIFTFSSGLGNSFIGTWAYYLTSPFNFLLLIFPKSQLPEAILLIISLKIGSIGLS 119
Query: 120 TYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKK 179
++ K F LA S +++L F VS WLD IL+PL++ + L K+
Sbjct: 120 GFYYFQKFFNGDNKIFALAASLAFSLSGFVVSYNLNLMWLDSLILLPLLLDAIDKLEDKR 179
Query: 180 KFLLYFTSLS-ILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMA 238
+ Y T ++ +L++ N+Y G+M F + +++ + ++K L ++ S
Sbjct: 180 RHYFYLTMITFLLWLTNFYTGFMVLFFGLLYFINTLLNSSFSKKQIILQYVTKSFFGTSL 239
Query: 239 SLILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKY-GAIPMIFVGL 297
+ +++LP+ F++ +G+ ++ T F K IG+F+ T+ +P IF+
Sbjct: 240 AALILLPSFFEI-LNGKIHSDTTLSMGFQFPPYQTFYKLTIGAFNFTEMEKGLPNIFLTS 298
Query: 298 LPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIF 357
+ +L IL+F + KL+ A+ TFL SF L L W P + R+++IF
Sbjct: 299 IFTLLCILYFINQHFSIKEKLLSALLLTFLFFSFSFNPLILLWHLGQYPVWYPARFSFIF 358
Query: 358 STLLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLV 417
S IY +VL +E + ++SL L+++ FL NI+LT+ FL+
Sbjct: 359 SFYAIYLGVQVLAHTQEFSPSSKIISLLLVISLSSFLFLNLHQKEFLNQTNIILTILFLL 418
Query: 418 VYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPA 477
L+LL K+I V F I + +E+S+N + +D I+ + F +++ ++I
Sbjct: 419 CSLLILLFFNYKWIPVIFFGI-----VGLEVSINLIASLDNISYQKNF-DYTNFTKNISE 472
Query: 478 MESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTN 537
++ + RTEK T++ +D + +Y GIS F+S+ +RS + +D LG +++ +
Sbjct: 473 STAYLHKYDSGLYRTEKTFTRSDDDPLSNDYYGISNFNSISDRSTINLIDYLGLENNDNS 532
Query: 538 LNLRYANNSILADSLFGIQYNISDNPI---------DKYGFKDIYQKDNL---------- 578
+A + L+DS+ GI+YNI PI + F + + +L
Sbjct: 533 FTNNFA--TPLSDSILGIKYNIV--PIKNRRKLPAEQQIVFTSAFYRPDLIRNKVVKSFK 588
Query: 579 --ALYENQFSLPIAFASQFVYNDVKFNEHTLDNQASFLNQLANVDFDYFSPILYEKTENT 636
+ +N +LP+ F S + NQ + N + + F+ LY N
Sbjct: 589 QVQIRKNSSALPLIFISPSHKKINFYTSMPSANQNTLFNSIVGKKINLFNS-LYLTNPNK 647
Query: 637 DDLISVTSSSNED--------AAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSE 688
+ I T + NE A + ++I + YL SN + V I VN
Sbjct: 648 IENIKSTKNVNEYQKINKSRIATLSFKISSFQKGPYYLELP----SNLDAESVSITVNGH 703
Query: 689 KKTFTTDNAFS--FFNLGY----TKEKKTFNINVSFPGNSQVSFESPTFYRLDTQTLTEA 742
D S N+GY T K TF +N N + + + +
Sbjct: 704 HLN-NQDLGISNKLLNIGYYSPNTPIKVTFKLN-----NEKTNLSGIRVLQFREHEFNQI 757
Query: 743 IQKIKE-QPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFM 801
I++ E QP+T TS + Y ++D + TIPY K W +GK ++ ++ F+
Sbjct: 758 IRQFNEKQPITQQTSPISLKLNYTARRDKILNSTIPYSKNWLILDNGKLLKTEKFAHTFL 817
Query: 802 KVDVPKGKGTITLSFIPNGFITG 824
+ KGK +TL +IP F+ G
Sbjct: 818 SARLSKGKHHLTLIYIPFAFLIG 840
>gi|42519497|ref|NP_965427.1| hypothetical protein LJ1621 [Lactobacillus johnsonii NCC 533]
gi|41583785|gb|AAS09393.1| hypothetical protein LJ_1621 [Lactobacillus johnsonii NCC 533]
Length = 858
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 226/864 (26%), Positives = 399/864 (46%), Gaps = 76/864 (8%)
Query: 1 MKLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILH 60
+K +FK + Y++SF++P I +L +G L D QY+ F +N L
Sbjct: 6 IKTYFKNKYLYWLSFLLPTCIFASYFLYRG------QEILTVDLGQQYIDFLSFYKNNLL 59
Query: 61 GNG-SLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLS 119
N + +TF++GLG +F S+YYL S + L+ F +++P A+ L LK G IGLS
Sbjct: 60 SNPLNFIFTFSNGLGSSFIGTSAYYLNSPFNFLLLLFSNSSLPIAILLIISLKVGAIGLS 119
Query: 120 TYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKK 179
++F K F+ LA S ++AL F VS WLD IL+PL++ + L +K
Sbjct: 120 SFFYFQKFFKGDNKIFALAASLAFALSGFVVSYNLNLMWLDSLILLPLLLDAIDKLFEQK 179
Query: 180 KFLLYFTSLS-ILFIQNYYFGYMTALF-LIFWYLCQISWDFKTRKSSFLDFIITSVLAGM 237
K Y T+++ +L++ N+Y G+M F L+++ I+ F ++ + S+L
Sbjct: 180 KHYFYLTTITFLLWLTNFYTGFMVLFFGLLYFITALINHSFSSK--IIFHYFTKSLLGTT 237
Query: 238 ASLILILPTLFDLQTHGEKLTEVT---KFQTESSWYLDLFAKQFIGSFDTTKY-GAIPMI 293
++LP F++ +G+ ++ T FQ LD K IG+F+ T+ +P I
Sbjct: 238 LGAFVLLPAFFEI-LNGKINSDTTLSLGFQFAPYQALD---KLVIGAFNFTEMEKGLPNI 293
Query: 294 FVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRY 353
F+ + +L +L+F + K AI FL SF L L W P + R+
Sbjct: 294 FLTSIFTLLCLLYFINQHFSLKEKFTSAILLLFLFLSFSFNPLVLLWHLGQYPVWYPARF 353
Query: 354 AWIFSTLLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTL 413
++IFS IY +VL + + + + SL L+++ + + FL+ NI+LT+
Sbjct: 354 SFIFSFYAIYLGVQVLAHTHKFNLTSKIASLLLVISLSIFLLLSIHQKEFLSQTNIILTI 413
Query: 414 EFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNR 473
FL+ L++L K+I V F I + +E+S+N + +D I+ + F +++
Sbjct: 414 LFLLCSLLIILFFNYKWIPVIFFGI-----VGLEVSINLLASLDNISYQKNF-DYANFTS 467
Query: 474 DIPAMESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKS 533
++ ++ + RTEK T++ +D NY G+S F+S+ +R+A + +D LG ++
Sbjct: 468 NVSQTTTYLHKYDSGLYRTEKTFTRSDDDPFSNNYYGVSNFNSISDRAAINLVDYLGLEN 527
Query: 534 SGTNLNLRYANNSILADSLFGIQYNISDNPI---------DKYGFKDIYQKDNLA----- 579
+ + +A + L+DSL GI+YNI PI ++ F + + +L
Sbjct: 528 NDNSFTNNFA--TPLSDSLLGIKYNIV--PIKNRRNLPKKEQVVFTSAFYRPDLVTNTVV 583
Query: 580 -------LYENQFSLPIAFASQFVYNDVKFNEHTLDNQASFLNQLANVDFDYFSPILY-- 630
+ +N +LP+ F S +N NQ + + + + F+ +
Sbjct: 584 KSFKQLQIRKNSSALPLIFISNTHQKITFYNNMPATNQNNLFSNILGQKLNLFNSLYLTN 643
Query: 631 -EKTENTDDLISVTS----SSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILV 685
K +NT ++ N+ A I + I E YL SN I+V
Sbjct: 644 PSKLKNTKHSKNINEYKKIDKNKTANITFNISSFEKGAYYLELP----SNLTTNVTSIIV 699
Query: 686 NSEKKTFTTDN---AFSFFNLGY----TKEKKTFNINVSFPGNSQVSFESPTFYRLDTQT 738
N+ + D+ + N+GY T K FN+N ++ +
Sbjct: 700 NNHQ--LNNDDLGISSKLLNIGYYSTNTPIKIVFNLN-----TENINLNGIRVLQFREDE 752
Query: 739 LTEAIQKI-KEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQ 797
+ I+K ++QPVT TS + Y Q++ ++ TIPY K W + +GK ++ +
Sbjct: 753 FNKIIRKFNQKQPVTHQTSPISLKINYTAQKNETLNSTIPYSKNWLIFDNGKLLQTHKFA 812
Query: 798 TGFMKVDVPKGKGTITLSFIPNGF 821
F+ + +G +TL ++P F
Sbjct: 813 QTFLSAPLKQGPHQLTLIYVPVAF 836
>gi|42518370|ref|NP_964300.1| hypothetical protein LJ0283 [Lactobacillus johnsonii NCC 533]
gi|41582655|gb|AAS08266.1| hypothetical protein LJ_0283 [Lactobacillus johnsonii NCC 533]
Length = 895
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 213/858 (24%), Positives = 379/858 (44%), Gaps = 74/858 (8%)
Query: 42 GDGFHQYVIFDIALRNILHGN-GSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTN 100
GD +QY+ F R+++ GN S ++F +GLG + YYL S L+ +V+ F +
Sbjct: 50 GDLPNQYLSFFQYYRHLMLGNWSSAGFSFLNGLGGDMAGNIGYYLLSPLNFIVFLFPASK 109
Query: 101 MPDAVYLTTLLKFGLI-GLSTYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWL 159
M AVY+ L+K GL+ G T+ +L K F+ + L +Y L ++++ W
Sbjct: 110 MNIAVYIIILIKLGLMSGTFTWLTL-KWFKFKYQAYPVFLGIAYGLSGYSIAYAGNVMWF 168
Query: 160 DVFILIPLIITGLQILITKKKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFK 219
D +L+PLI L I K +L Y L+ I NYY GYM +FL+ +L +F+
Sbjct: 169 DGLVLLPLISYALIRGIRKNVWLAYSILLACAIIFNYYIGYMICIFLVILFLAYTVNNFE 228
Query: 220 TRKS---SFLDFIITSVLAGMASLILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAK 276
RK+ F F I+S+++G+ S ++ILPT F+L ++ KL++ L K
Sbjct: 229 NRKTFLHQFTGFAISSIISGLISAVVILPTFFNLSSN--KLSQADFNSNFEIKTLISGGK 286
Query: 277 QFIGSFDTTKYGAIPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVL 336
F Y IFVG L I+ IL+F ++ + F + S + +
Sbjct: 287 AVSRLFIGDTYNDWAPIFVGTLVLIVFILYFIDGRNSIKERITNLVIGLFFVLSITVPKI 346
Query: 337 DLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLNRLKEIKIWN-----FLVSLFLIVTGF 391
LFW G + +R+ +I + AA+ L+ L E + + ++L+V+
Sbjct: 347 YLFWHGGQQTIAYPYRFGFIIVFWFLLLAAKELSNLSEYRKESKNERLIAAGIYLLVS-- 404
Query: 392 LATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLN 451
LA +Y++ L + ++++ +L+ K+F+ V L L +VE++ N
Sbjct: 405 LAAVYIRRRIGPWNGY-AWLAVVLVIIFGILVYFSDKRFVRVTLL-----LVGLVELAGN 458
Query: 452 ASSQMDGIAKEWG-FASRSSYNRDIPAMESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNG 510
A ++ + + G + S S N+ I + S G + + +L G + FNY G
Sbjct: 459 AYIGLNHLGMKSGAYPSYVSENQSIISRIPNSDKTG-RLAKNYELNNDRG-EGYTFNYRG 516
Query: 511 ISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNISDNPIDK---- 566
+ +FSS + SS + LGF S Y +++ D++F ++ I+ + ++
Sbjct: 517 MEEFSSNNDSRISSLMTDLGF--STFRYFYYYQTGTVVTDAIFNVKTFINSSLSNQSVSP 574
Query: 567 ----YGFKD-------IYQKDNLALYENQFSLPIAFASQFVYNDVKFNEHT-LDNQASFL 614
YG ++ I ++ + Y N+ +LP AFA N +KF E + NQ L
Sbjct: 575 EYISYGLRNDLKNHPVILKQGDKTAYRNE-TLPFAFAGGLA-NKLKFKEENPVYNQNLVL 632
Query: 615 NQLANVDFDYFSPILYEKTENTDDL--------ISVTSSSNEDAAIQYQIEVPENSQVYL 666
N L D S N+ ++ +S I + + QV
Sbjct: 633 NSLTQTKKDVLSYSSKNAEINSKNINLKFKKGKFKAKRTSENPGTITFTYSNLKPDQV-- 690
Query: 667 SFTNLHFSNDKQKKVDILVNSEKKT-------FTTD--------NAFSFFNLGYTKEKK- 710
+ FS + +++ +L + + K FT ++ +G +K
Sbjct: 691 --GYIRFSKNLMEQIVVLNSYQMKQKPDYRLPFTVSINGKDVHLQQYTDQLIGVQADKDG 748
Query: 711 TFNINVSFPGNS-QVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFA-TYDVQQ 768
+ ++ G S +V F+ P F +D L + ++K + + S ++ A T +
Sbjct: 749 KLVVKMTLDGKSNEVEFKYPRFVNIDQTALEDKVKKAQNNRMKFSAFRDSYVAGTVKTDK 808
Query: 769 DTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICS 828
+ ++ TIPY KGW A DGK ++I + F+ + + G IT + GF+ GA+ S
Sbjct: 809 NENLATTIPYSKGWRAEVDGKPVKINRTLKVFIGLKLKPGTHQITFKYRTPGFVIGALLS 868
Query: 829 FTSLLLFGIYNHRQKSSK 846
++ +Y K +K
Sbjct: 869 IIGIIALAVYTVYLKKNK 886
>gi|24380402|ref|NP_722357.1| putative transmembrane protein [Streptococcus mutans UA159]
gi|24378426|gb|AAN59663.1|AE015029_2 putative transmembrane protein [Streptococcus mutans UA159]
Length = 974
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 211/943 (22%), Positives = 389/943 (41%), Gaps = 130/943 (13%)
Query: 12 FVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYV-IFDIALRNILHGNGS-LFYTF 69
S ++P++IM+ V+ + + + D QY+ ++ +L G+ S LFY+F
Sbjct: 24 LASTLLPMMIMLVVWYFMDTFPFGRNTLMAVDFGQQYIGLYGFLKATVLTGDWSGLFYSF 83
Query: 70 TSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQ 129
+ +G + + L S + F LT AV+LT L++G +GLS + L K ++
Sbjct: 84 SKSIGGAMIGIWGFNLISPFNLFYILFPLTQFKWAVFLTIWLRYGAMGLSFAYLLIKRYK 143
Query: 130 SIP-NPLKLAL-STSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTS 187
++ NP + L +T+YAL VS + D I++PL+I L+ LI +K Y
Sbjct: 144 ALSYNPWLVPLMATAYALSGMIVSYQMNPIFYDAMIMLPLVIISLEELIDGRKPFKYIIV 203
Query: 188 LSILFIQNYYFGYMTALFLIFWYLCQIS-------WDFKTRKSSF----LDFIITSVLAG 236
L++ + ++Y GYM LF+ Y C + D+K + ++F L I S+LA
Sbjct: 204 LALTMLLHFYMGYMICLFVAL-YTCYYAAPKLAEIGDWKIKITAFFKPVLRVICYSILAI 262
Query: 237 MASLILILPTLFD-LQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGA----IP 291
+ L+ P + L++ G + +T D+ +K IG FD + +P
Sbjct: 263 TSVFFLLYPIFLNLLRSKGAYDSPLTFSFALQINPFDILSKLMIGGFDNESSWSAGPNLP 322
Query: 292 MIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLH 351
I+VG L + L+F + K++ A S E + W P F +
Sbjct: 323 NIYVGALALVGFFLYFVQAKAHKYSKVVAAFISLLFFVSIVNEFANKIWHMGQNPAGFFY 382
Query: 352 RYAWIFSTLLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSH-YSFLTDLNIL 410
R++WI S ++ A + L K + +V I+ F + Y+ SH Y+++
Sbjct: 383 RFSWILSFFMVLLAYQALRERKYLGWKGLIVG---IILSFASAYYVISHDYTYIAKKQPK 439
Query: 411 LTLEFLVVYSLLLLAVIKKF----------------------ISVNLFAILIS------- 441
+ +F+ + +L ++ F I+ +L AI +S
Sbjct: 440 IVTDFVTSHEAFILLLVFVFFAGLAVYTWKRLDQYKEARLCAIAASLLAIPVSLYLLNKG 499
Query: 442 -------------LFIMVEMSLNASSQM---------------DGIAKE--WGFASRSSY 471
LF+++ ++L S++ + + G+A +
Sbjct: 500 LLLTQVCLTLLTWLFVLIYLALRPKSKLVWSLLALVTVLELGYNAYLSQVTLGYADAYKF 559
Query: 472 NRDIPAMESFSTDIGNQ----FTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLD 527
+M+ S I + F R + ND +Y G+S FSS +S + +
Sbjct: 560 TDVTKSMKELSDVIKKKNKAGFYRVGSSFLYSKNDPFLVSYPGLSTFSSNMEKSTINLFN 619
Query: 528 KLGFKSSGTNLNLRYANNSILADSLFGIQYNI-----SDNPIDKYG-------------- 568
+G G N YAN + L D+L+ ++Y I S I+K+
Sbjct: 620 SMG--DVGGNAATFYANGTALTDALYSVRYYIDRKDYSATDIEKHPNWQFFNRNATRSDL 677
Query: 569 ---FKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFN-EHTLDNQASFLNQLANVDFDY 624
+K IY+ +YEN L AF + + +++KF + + NQ L+ ++ Y
Sbjct: 678 KEYYKPIYENKRFIIYENPDVLSPAFGTNTLTHNIKFGINNPVSNQNIILSSMSGKKQKY 737
Query: 625 FSPILYEKTENTDDLISVTSSSNEDAAIQYQIEVPENSQVYLSFT-----NLHFS----- 674
F I K E LI++ + I +I+ + + ++FT +F
Sbjct: 738 FEYIGIPKIE----LINMQEVNENGHRIFKRIDKKQAGTIRITFTPQTDDTYYFQAPYSL 793
Query: 675 NDKQKKVDILVNSEKKTFTTD-NAFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYR 733
V I++N++ ++ + +NL + + + + Q+ + R
Sbjct: 794 RKSMGNVSIMLNNQWYHYSQSYDQVQLWNLTSKTPNQEMVLQLQTSQDDQLDLTNMALVR 853
Query: 734 LDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTS--IFFTIPYDKGWSAYQDGKKI 791
+ + + I +Q +TV+ N + + D S + +IPY+ GW+ DGKK+
Sbjct: 854 ANQTAIKKVIDDRLKQDMTVTKWTNTLIKGHVQITDKSNVMMTSIPYNPGWTVKVDGKKV 913
Query: 792 EIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLL 834
+ +A + + GK I +SF+P GF+ G S S+ L
Sbjct: 914 KTDEAWGSLLSFPITSGKHRIEMSFMPQGFVVGIAVSVISVAL 956
>gi|116333022|ref|YP_794549.1| Predicted membrane protein [Lactobacillus brevis ATCC 367]
gi|116098369|gb|ABJ63518.1| Predicted membrane protein [Lactobacillus brevis ATCC 367]
Length = 906
Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats.
Identities = 205/906 (22%), Positives = 374/906 (41%), Gaps = 115/906 (12%)
Query: 9 WTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALR-NILHGNGSLFY 67
W Y +F+IP+IIM + I + + LL D QY+ LR ILHG LF
Sbjct: 18 WVYGGAFLIPLIIMCLAFWHLRITPFGNRNLLLSDMGTQYIPILENLRATILHGQFHLF- 76
Query: 68 TFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKL 127
+F+ G G L +YY S + L++ F N+P AV +LK +GL+ L
Sbjct: 77 SFSLGSGSAVVPLLTYYAISPFNLLIFAFSAANLPIAVSWIIMLKISAMGLTMAIFLRHA 136
Query: 128 FQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTS 187
F + L +T+Y+L F WLD I +PL+ GL L+++ + LY S
Sbjct: 137 FLKSGWSM-LLFTTAYSLCGFVAMYFYDMMWLDALIWLPLVALGLHRLVSQHHYGLYTIS 195
Query: 188 LSILFIQNYYFGYMTALFLIFWYLCQISWD----------FKTRKSSFLDFIITSVLAGM 237
L+I NYY GYMT LF + +++ I ++ +++ FII S+LAG
Sbjct: 196 LTITIFCNYYLGYMTCLFSVLYFIYLIIEHQPTPTPFKDVWRMHRAAIRQFIIGSLLAGG 255
Query: 238 ASLILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIG--SFDTTKYGAIPMIFV 295
S+++++PT + G+ V + + ++ A+ G ++ + Y A P +F+
Sbjct: 256 MSMVVLIPTALGMLLTGKSNVFVNNYLPTGQFGTEVLAQFAPGTSTYVSHLYHA-PSLFM 314
Query: 296 GLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAW 355
G L F+L I++F I K + S ++ VL+ W P F R +
Sbjct: 315 GTLMFLLLIVYFVSPQIHAVEKRRNMWLLIAMGLSLFVTVLNTIWHMFQQPAGFPFRNVY 374
Query: 356 IFSTLLIYTA--------AEVLNRLKEIKIWNFLVSLFLIVTGFLAT-----IYLKSHYS 402
F+ L + TA A+ +N + K+ + + +V GF++ ++L+ S
Sbjct: 375 FFTFLALVTAYRAWQTHPAQTMNDPQ--KVLALVWGIGFLVVGFISAQAIPKLFLRLRPS 432
Query: 403 FLTDLNILLTLEF-------LVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQ 455
F +L F ++ +L I ++ V + + + LF + + ++Q
Sbjct: 433 FNHELYAASQPSFHLLWLALGLLLLNTMLLFISEWRPVRISLLALILFGELGGNFVVATQ 492
Query: 456 MDGIAKEWGFASRSSYNRDIPAMESFS-TDIGNQFTRTEKLQTQTG----------NDSM 504
+ FA Y +D ++ + T R E L ND +
Sbjct: 493 GMEFGNQAKFA--KYYRQDAALLDQVTATKTKTNLHRVEFLHANIAKAYDGAYNHYNDPV 550
Query: 505 KFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNISDNPI 564
FNY GIS +SS + LG+ S + + L D+L G++Y +
Sbjct: 551 MFNYAGISSYSSTLIEQSRVFQHDLGYFSPNVR-RISAQGYTHLTDTLMGVKYRL----- 604
Query: 565 DKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEHTLDNQASFLNQLANVDFDY 624
+I ++ + ++ + A +Q +K ++ L NQ L L D
Sbjct: 605 ------NINKEPAVTRLDSYAGIGFAVPNQLAQLQLK-DQAALTNQQQILTALG-AKPDT 656
Query: 625 FSPI----LYEKTENTDDLISVTSSS-----NEDAAIQ-YQIEV----------PENSQV 664
+P+ + + DL ++ + + + ++Q + + V P NS +
Sbjct: 657 LAPVSVLKVNTRAAKAHDLATIPTKTRHQMRGDHTSVQTFTVRVNATGLLHGYSPSNSII 716
Query: 665 YLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGNSQV 724
Y S + V L+N++ + NLG + +K + +S+ +
Sbjct: 717 YSSL------RLNGRSVKPLINADGFRYV-------INLG--QHQKGQILKISYVTQTPT 761
Query: 725 SFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDV---QQDTSIFFTIPYDKG 781
+ F L+ + + ++K+Q ++ + + + +V +Q + ++ IP G
Sbjct: 762 TGYDNHFVSLNQKRYVALVNRLKQQRFKLNANSGVTWLSGNVTGTRQRSLLYLAIPDVPG 821
Query: 782 WSAYQDGKKIEI------------KQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSF 829
W+A +G+ ++I KQ G + V + G+ + LS+ G GA+ S
Sbjct: 822 WTATVNGRSVKIKSLMRAQSLIPVKQTYNGVIGVPLQAGQNHVILSYQTPGLKLGALISL 881
Query: 830 TSLLLF 835
L LF
Sbjct: 882 ACLALF 887
>gi|24380400|ref|NP_722355.1| putative transmembrane protein [Streptococcus mutans UA159]
gi|24378423|gb|AAN59661.1|AE015028_7 putative transmembrane protein [Streptococcus mutans UA159]
Length = 932
Score = 149 bits (376), Expect = 9e-34, Method: Composition-based stats.
Identities = 220/884 (24%), Positives = 381/884 (43%), Gaps = 85/884 (9%)
Query: 5 FKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGN-- 62
FK + +F +P+++M V+ +Y + + GD QY+ AL +
Sbjct: 58 FKNTLGFLAAFCLPMLVMAVVFAVMKLYPFGKETLMSGDYTLQYIPLYRALGHAFRHMDI 117
Query: 63 GSLFYTFTSGLG------LNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLI 116
G+LF+++ G+G F +LS + L L+P Y N+ +V+L TLL+ G
Sbjct: 118 GALFWSWHKGVGGVMPSVWGFNSLSPFSLAIGLAPAKYL----NL--SVFLVTLLRQGFS 171
Query: 117 GLSTYFSLNKLFQSIPNPL-KLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQIL 175
GLS Y+ L+K +++ + L + ++ Y L F + +LD IL+PL++ G++ +
Sbjct: 172 GLSFYYFLHKRYEAHRHRLLAVCIAAIYGLSGFLIVNQVNPNFLDNIILLPLLLIGVEKI 231
Query: 176 ITKKKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFL------DFI 229
+ K + Y L+++F+ +Y YM +F+IF+ I +KS+FL +
Sbjct: 232 LDGKVSIKYTLVLALMFVVQFYTAYMACIFVIFYSFYYIL----AQKSAFLFKAKQLLRL 287
Query: 230 ITSVLAGMA-SLILILPTLFDLQTHGEKLTEVTKFQTESSWY-LDLFAKQFIGSFDTTKY 287
+ L G+ S I +LP + L EV + + + L K F G+ ++
Sbjct: 288 LIYSLLGIGLSAIWLLPVFYSLLDTKAAGGEVDPWAFTFLYNPIRLLIKFFPGAASGEEW 347
Query: 288 G---AIPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMH 344
G A+P +VG+L FI FF K I K+ + FLI +F FW
Sbjct: 348 GDFTALPNFYVGVLGFIGLFNFFFTKRIALRKKISGFLLLIFLILAFSNAAAIRFWHMGQ 407
Query: 345 TPNMFLHRYAWIFSTLLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYL-----KS 399
P F +R AW+ S + + + L ++K W+ L + V LA +Y+ +
Sbjct: 408 MPVGFYYRNAWLLSPVFLILTYQALQKVKS---WSRLQMIATFVLALLANVYVYFAVKEK 464
Query: 400 HYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGI 459
Y+ +T L + L++ L+ + K + F IL+S MV+M +NA +D
Sbjct: 465 TYTLVTVWQELGMIITLILLLFLIWFQLSKSWQL-AFVILVS---MVDMGINAKITID-- 518
Query: 460 AKEWGFASRSSYNRDIPAMESFSTDIG---NQFTRTEKLQTQTGNDSMKFNYNGISQFSS 516
W S SS E+F ++ + R EK T NDS+ +NY G++ F+S
Sbjct: 519 RNLW--HSPSSVLAAESKQEAFYKNLKLPKSGLARLEKSSANTWNDSLTYNYYGVNHFTS 576
Query: 517 VRNRSASSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNISDNPIDKYG-------- 568
L +LG SS T +++ Y + L D+L ++Y + DN Y
Sbjct: 577 SVEYKNLEFLGRLGLPSS-TAISM-YVGGTPLTDALVNLRYYV-DNATWTYSARKDLANY 633
Query: 569 FKDIYQKDNLALYENQFSLPIAFA-------SQFVYNDVKFNEHTL-----DNQASFLN- 615
+ I N L EN + F+ + DV N++ + DN + L+
Sbjct: 634 YHPIQTLGNAKLLENTSVFGLGFSGDGAMLREKLDKEDVVANQNQIYHGLSDNLENLLDP 693
Query: 616 -QLANVDFDYFSPILYEKTENTDDLISVTSSSNEDAAIQYQIEVPENSQVYLSFTNLHFS 674
Q AN+ D + + I SS+ I+ +N+ YL + +H +
Sbjct: 694 YQAANLSLDNVAL----ADDANGQQIYKRQSSDRPGTIRLTWTPQDNNSYYLYSSQIHST 749
Query: 675 NDKQKKVDILVNSEKKT-FTTDNAFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYR 733
+ K + N + T F ++L + + +S NS ++ YR
Sbjct: 750 DLNHLKFTL--NGQAYTVFDRYRNPQLWSLASNSKDQEQTFEISLTDNSSLNLTGLQLYR 807
Query: 734 LDTQTLTEAIQK---IKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKK 790
+ + T +++ K P V TS + V +F +IPY+ GW DGK
Sbjct: 808 FNDDSFTNFVKQGHIAKWNPEKV-TSLSLSGEVKQVSGKNYLFTSIPYNAGWHVKVDGKT 866
Query: 791 IEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLL 834
++ ++ + +P GK I L +IP G I G++ + SL+
Sbjct: 867 VKTQEVWNAMLAFKLPSGKHQIKLYYIPQGLIYGSLITLLSLIF 910
>gi|28378158|ref|NP_785050.1| integral membrane protein [Lactobacillus plantarum WCFS1]
gi|28270993|emb|CAD63897.1| integral membrane protein [Lactobacillus plantarum WCFS1]
Length = 860
Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 194/865 (22%), Positives = 361/865 (41%), Gaps = 72/865 (8%)
Query: 16 IIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFTSGLGL 75
++ + IM V+ GI + + L+ D QY+ F A R+ + + Y+F+ LG
Sbjct: 29 LLSLAIMGIVFAIWGITPFGNHNLLISDMGGQYLSFFTAYRHAILTHSFQLYSFSQSLGS 88
Query: 76 NFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSIPNPL 135
N +YYL S + L+ F N+P + L +LK LI ++ L FQ+
Sbjct: 89 NALPTIAYYLLSPFNILMLLFPAANLPTGLSLLIMLKISLIAVTMTAFLQTHFQTKRWST 148
Query: 136 KLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSILFIQN 195
+ +++L F WLD I +PL+I GL LI +F L + + N
Sbjct: 149 AI-FGVAFSLSGFVALNYFTIMWLDALIWLPLVIQGLDHLIATSHPGRFFGWLWVSIVTN 207
Query: 196 YYFGYMTALFLIFWYLCQIS---------WDFKTRKSSFL-DFIITSVLAGMASLILILP 245
YY GYMT LF+I++++ Q+ W + S + ++T +L+G++++ +++P
Sbjct: 208 YYLGYMTCLFVIYYFIYQLFERKRPQDSLWQTVRHQFSLIRHVVVTMLLSGLSTMFVLIP 267
Query: 246 TLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFD-TTKYGAIPMIFVGLLPFILTI 304
T + T + +++ + + L + ++ +G+ + TT+ P +F L +L +
Sbjct: 268 TGLGMLTTAKSAVKLSSYLPVPQFGLAVLSQFGLGAANFTTRLVHAPTVFSSSLVVLLAL 327
Query: 305 LFFT----LKSIKFH-VKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFST 359
F+ K+ K+H L+ A+F S I LD W TP F +R A+ FS
Sbjct: 328 SFWVQPNLTKAHKWHSFGLLLALFL-----SMDIRTLDTIWHMFQTPAGFPYRNAFFFSF 382
Query: 360 LLIYTAAEV-LNRLKEIKI-WNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLV 417
+LI A E L + I + W +L+ ++ L ++ LT + L+L ++
Sbjct: 383 VLIMIAFEAWLAGPRRIALRWQWLLPTLMVSALILGWFAQRTAKHPLTTSTLALSLVAVI 442
Query: 418 VYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPA 477
+ ++ L A K++ +++L I ++L + +L + G ++ A R+ Y R + A
Sbjct: 443 LTAIALFATAKRWQTLSLAGI-VALELGTNSTLMMAKSPLGNQAKFVTAYRTEY-RQMQA 500
Query: 478 MESFSTDIGNQFTRTEKLQT------------QTGNDSMKFNYNGISQFSSVRNRSASST 525
+ D Q R E T + ND M FN++ I+ +SS
Sbjct: 501 V----NDPDGQLYRVENQNTLINQAYNYDSKYRNYNDPMLFNFHDITYYSSTFANQTRLM 556
Query: 526 LDKLGFKSSGTNLNLRYANNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQF 585
L LG S N + D L ++Y + N + + + + ++ L F
Sbjct: 557 LKSLGLFSKNARRVSSEGLNPV-TDLLLDVKYAVQLNAVGQATTR-LRSQNGLG-----F 609
Query: 586 SLPIAFASQFVYNDVKFNEHT-LDNQASFLNQLANVDFDYFSPILYEKTENTDDLISVTS 644
++P AF +K +++ + NQ L L YF T +D +I +
Sbjct: 610 AVPTAF------RQLKLRQNSAIINQERLLQSLRPSKRAYFG----NATMLSDHVIQDSQ 659
Query: 645 SSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLG 704
+ ++ + +Y + T + LV ++ F + +LG
Sbjct: 660 AKRYPYLHTVKLRMTRTGTLYYNDTTRQTKYTTMRVNGHLVPTK---FNANGELVLRSLG 716
Query: 705 YTKEKKTFNINVSFPGNSQVSFESPT-FYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFAT 763
Y + + V +Q + + LD + Q++ T + + +
Sbjct: 717 YFDKGAVVTLTVK---RTQPTLGTHVHIASLDQARFNQVKQQLLSTRFTPTYHVSGIHTV 773
Query: 764 YDVQ-----QDTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIP 818
Q + ++ IP DKGW A +G K+ K G + + + GK I L++
Sbjct: 774 VSGQVTNRSKQKWLYVAIPADKGWRATVNGVKVTPKTVIGGMLALPIQPGKNQIQLTYHV 833
Query: 819 NGFITGAICSFTSLLLFGIYNHRQK 843
G + G + S S L F ++ R +
Sbjct: 834 PGLLGGLLISIISGLSFILWRQRYR 858
>gi|58337775|ref|YP_194360.1| putative ABC transporter permease protein [Lactobacillus
acidophilus NCFM]
gi|58255092|gb|AAV43329.1| putative ABC transporter permease protein [Lactobacillus
acidophilus NCFM]
Length = 859
Score = 142 bits (359), Expect = 8e-32, Method: Composition-based stats.
Identities = 211/877 (24%), Positives = 383/877 (43%), Gaps = 86/877 (9%)
Query: 1 MKLFFKTY-------WTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDI 53
MK FF T+ Y +SFI+P +I + + + L D QYV F
Sbjct: 1 MKKFFITHNLLEKEKILYLMSFILPGLIFFSYF------FYTKNGVLTVDLGQQYVDFLA 54
Query: 54 ALR-NILHGNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLK 112
R N+ +L YTF++GLG + A +YYL S + L++ F +P + L LK
Sbjct: 55 FFRHNLFTHPFNLIYTFSNGLGNSMLATDAYYLLSPFNLLLFVFPQHFLPKVILLIITLK 114
Query: 113 FGLIGLSTYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGL 172
GL++Y+ Q I + LA S +YAL + VS WLD +L+PL+I +
Sbjct: 115 IATAGLTSYYYWK---QKINDFYALAASAAYALSGYVVSNHYNLMWLDSVLLLPLLIEAI 171
Query: 173 -QILITKKKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSS-FLDFII 230
++L KK L+ T L L+ N+Y +M F + + L Q+ + K ++ + F++++
Sbjct: 172 DRVLNGKKNHLILITFL--LWFTNFYTAFMALFFGLLYLLTQLFFINKDKRGAIFIEYLK 229
Query: 231 TSVLAGMASLILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYG-A 289
SVL ++LP ++ + + Y +L AK G+++ +
Sbjct: 230 RSVLGSFLDAFMLLPVFIEMLQGKATASAQWSLNFQFPPYEEL-AKLAAGAYNFHEMQEG 288
Query: 290 IPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMF 349
+P I++ L +LTIL+F K I + KL + FLIAS + L L W P +
Sbjct: 289 MPSIYIALPFVLLTILYFLRKQITWQRKLANGLLLIFLIASLFWTPLVLLWHLGQFPVWY 348
Query: 350 LHRYAWIFSTLLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNI 409
R++++ + A L + ++I +W + L + + ++ + ++FLT +
Sbjct: 349 PGRFSFVLIFFSLNLAIIALKQTEKIYLWQIGILAILAIGLIIFWLFNQKDFAFLTQDAL 408
Query: 410 LLTLEFLVVYSLLLLAVI--KKFISVNLFAILISLFIMVEMSL---NASSQMDGIAKEWG 464
+ + FL + +LL +++I K ++ F +++ L ++V + L N + Q D
Sbjct: 409 IASGAFLAL-ALLFISLIYRKHSLAAPFFYLVVELELIVNLVLSLGNLAYQKD------- 460
Query: 465 FASRSSYNRDIPAMESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASS 524
A ++ ++ + + I + RTEK ++ +D NY GIS F+S+ +++
Sbjct: 461 -ADYQNFVQNTAQVTQYEKQIDDNLYRTEKTFYRSDDDPFSSNYYGISNFNSISDQNVLK 519
Query: 525 TLDKLGFKSSGTNLNLRYAN--NSILADSLFGIQYNI-------------------SDNP 563
LD GF ++ + Y N ++ + D LFGI+Y I S++
Sbjct: 520 LLDNFGFLNNSNS----YTNFGSTPITDDLFGIKYYILPNDDITPLKSNKQMKYDNSNHR 575
Query: 564 IDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEHTLD-NQASFLNQLANVDF 622
ID + + + L L +N + + F S +KF+ + NQ F
Sbjct: 576 IDVGDYLIQKRFNQLILMKNPDAASLLFLSPNKTKKIKFDPANITINQNKFFQTATGSKA 635
Query: 623 DYFSPILYEKTENTDDLISVTSSSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDK----- 677
F +++ D + SS + +QY + N + + F ++D
Sbjct: 636 QLFHNVIWP------DPKKINVSSWDGGWMQYS-KKKHNKESRVVFNFRPQTDDSYYIEL 688
Query: 678 -----QKKVDILVNSEKKTFTT-DNAFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTF 731
+ ++ VN + D NLG + + I + N+ ++ S +
Sbjct: 689 PGEIDENTTNMYVNGQSINLDVRDQNTRLINLGSKQRGQRIQIVFTLK-NNNLNLTSASI 747
Query: 732 YRLDTQTLTEAIQKI-KEQPVTVSTSKNKVFA-TYDVQQDTSIFFTIPYDKGWSAYQDGK 789
+RL+ Q L + K+QPV TS + + T+ + + ++ TIP + W + K
Sbjct: 748 WRLNVQRLNHEMNIFNKKQPVIRQTSPLVIKSNTFTINKTMTMNSTIPNNFNWLVLDNDK 807
Query: 790 KIEIKQA--QTGFMKVDVPKGKGTITLSFIPNGFITG 824
I + F+ + KGK ITL +IP F+ G
Sbjct: 808 IINKNKILFMNTFLNFSLSKGKHKITLVYIPWIFLVG 844
>gi|116514425|ref|YP_813331.1| Predicted membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|116093740|gb|ABJ58893.1| Predicted membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 860
Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats.
Identities = 199/872 (22%), Positives = 366/872 (41%), Gaps = 75/872 (8%)
Query: 13 VSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIF-DIALRNILHGNGSLFYTFTS 71
++F +P +I G +LS+ + L D QYV F +N+ L Y+F S
Sbjct: 22 LAFALPALIFAGYFLSK------KGNILTVDLGQQYVDFLAYYQQNLFKDPSKLIYSFAS 75
Query: 72 GLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSI 131
GLG + SYYL S + L+ FF +P + L K G IGLS Y K +Q +
Sbjct: 76 GLGGSMLGTDSYYLLSPFNLLLLFFPQKFLPQGILLVISCKIGAIGLSAYLVWGKKYQ-L 134
Query: 132 PNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSIL 191
LA S ++AL F V+ WLD L+P + + L++ +K L + +L
Sbjct: 135 AKEYVLAASFAFALCGFVVANNLNLMWLDSLALLPWLQEAIDRLLSGEKNHLVLITF-LL 193
Query: 192 FIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASLILILPTLFDLQ 251
++ N+Y GYMT LF + + L ++ + + +K F + S + + + PT +L
Sbjct: 194 WLTNFYTGYMTLLFGLLYLLVGLATNREPKK-RFWAYFKGSFFGSCLAGVSLWPTFLELL 252
Query: 252 THGEKLTEVTKFQTESSWYLD-------LFAKQFIGSFDTTKYG-AIPMIFVGLLPFILT 303
K + SW L+ L AK G++ + +P IF+ +L
Sbjct: 253 A--------GKTDADISWKLNFQFPPYQLIAKFIDGAYSFHEMSDGLPNIFISSCFTLLA 304
Query: 304 ILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIY 363
+LF KL + TFL+ S L L W P + R++++ S +
Sbjct: 305 LLFIFNSQFSKREKLARGLLLTFLVLSLSFTPLVLIWHLGQFPVWYPARFSFLVSFYALN 364
Query: 364 TAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLK---SHYSFLTDLNILLTLEFLVVYS 420
A E ++R ++N + + G +IYL F+ + T FL+
Sbjct: 365 LALENMDRE---PVFNLKQKVLAALLGASVSIYLSINPDKLEFIRQDGQVATGLFLLASL 421
Query: 421 LLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMES 480
L +L + + +A+L+ ++ E+++N ++ I+ + + + + ++ S
Sbjct: 422 LFILFIYGQHYLAGHYALLL---VVSEVTVNLIFSLNAISYQEN-KNYAKFEANVNQATS 477
Query: 481 FSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNL 540
+ + RTEK +++ +D NY GI+ F+S+ N S S+ L +LG+ + +
Sbjct: 478 YLAKTDSSLYRTEKSFSRSDDDPFTGNYYGITTFNSISNSSTSNLLSRLGYVHNSNS--- 534
Query: 541 RYANN--SILADSLFGIQYNISDN------------PIDKY-------GFKDIYQKDNLA 579
Y N ++L D+ G++Y + N P D + I Q ++
Sbjct: 535 -YTNQGGTLLTDACLGVKYYLEPNYSYDGVSAAQRMPYDNLNHRADLNSYYPIKQFKQIS 593
Query: 580 LYENQFSLPIAFASQFVYNDVKF-NEHTLDNQASFLNQLANVDFDYFSPILYE------K 632
+ +N+ +LP+ FASQ VKF + + NQ L + F + E K
Sbjct: 594 ILKNKQALPLIFASQSGQKKVKFLDNDPVHNQQKLWESLG-LSGQLFKKVKSEIKLTNLK 652
Query: 633 TENTDDLISVTSSSNEDAAIQYQIEVPENSQVYLSFTN-LHFSNDKQKKVDILVNSEKKT 691
++ L+ ++S + A++ + + N YL + F DI N E +
Sbjct: 653 VNQSNPLVFKKANSAKPASVTFSLTPKSNDSYYLQLPDGFDFKTASLSVNDIFYNYESR- 711
Query: 692 FTTDNAFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPV 751
D N+ +K + + NS + F+ + I+++K +
Sbjct: 712 ---DGQIRLVNIANQNKKSKIKVTFNLT-NSTLDLTGLIFWHFNNSAFKAGIKQLKAPEL 767
Query: 752 TVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGT 811
+ + ++ + Q TIPY K W Y +GK+++ + + ++ GK
Sbjct: 768 KLKQTGLQISSQTFKSQKKLWITTIPYSKNWLVYDNGKRVKTSKYAASLLAFNLRGGKHQ 827
Query: 812 ITLSFIPNGFITGAICSFTSLLLFGIYNHRQK 843
+TL + P I G++ S +L ++ + Q+
Sbjct: 828 LTLVYFPVSLIAGSLISLVTLAVYLLLKKEQR 859
>gi|104774330|ref|YP_619310.1| hypothetical protein Ldb1484 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423411|emb|CAI98284.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
Length = 832
Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats.
Identities = 189/828 (22%), Positives = 348/828 (42%), Gaps = 68/828 (8%)
Query: 56 RNILHGNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGL 115
+N+ L Y+F SGLG + SYYL S + L+ FF +P + L K G
Sbjct: 32 QNLFKDPSKLIYSFASGLGGSMLGTDSYYLLSPFNLLLLFFPQKFLPQGILLVISCKIGA 91
Query: 116 IGLSTYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQIL 175
IGLS Y K +Q + LA S ++AL F V+ WLD L+P + + L
Sbjct: 92 IGLSAYLVWGKKYQ-LAKEYVLAASFAFALCGFVVANNLNLMWLDSLALLPWLQEAIDRL 150
Query: 176 ITKKKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLA 235
++ +K L + +L++ N+Y GYMT LF + + L ++ + K +K F + S
Sbjct: 151 LSGEKNHLVLITF-LLWLTNFYTGYMTLLFGLLYLLVGLATNRKPKK-RFWAYFKGSFFG 208
Query: 236 GMASLILILPTLFDLQTHGEKLTEVTKFQTESSWYLD-------LFAKQFIGSFDTTKYG 288
+ + + PT +L K + SW L+ L AK G++ +
Sbjct: 209 SCLAGVSLWPTFLELLA--------GKTDADVSWKLNFQFPPYQLIAKFIDGAYSFHEMS 260
Query: 289 -AIPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPN 347
+P IF+ +L +LF KL + TFL+ S L L W P
Sbjct: 261 DGLPNIFISSCFTLLALLFIFNSQFSKREKLARGLLLTFLVLSLSFTPLVLIWHLGQFPV 320
Query: 348 MFLHRYAWIFSTLLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLK---SHYSFL 404
+ R++++ S + A E ++R ++N + + G +IYL F+
Sbjct: 321 WYPARFSFLVSFYALNLALENMDRE---PVFNLKQKVLAALLGASVSIYLSINPDKLEFI 377
Query: 405 TDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWG 464
+ T FL+ L +L + + +A+L+ ++ E+++N ++ I+ +
Sbjct: 378 RQDGQVATGLFLLASLLFILFIYGQHYLAGHYALLL---VVSEVTVNLIFSLNAISYQEN 434
Query: 465 FASRSSYNRDIPAMESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASS 524
+ + + ++ S+ + RTEK +++ +D NY GI+ F+S+ N S S+
Sbjct: 435 -KNYAKFEANVNQATSYLAKTDSSLYRTEKSFSRSDDDPFTGNYYGITTFNSISNSSTSN 493
Query: 525 TLDKLGFKSSGTNLNLRYANN--SILADSLFGIQYNISDN------------PIDKY--- 567
L +LG+ + + Y N ++L D+ G++Y + N P D
Sbjct: 494 LLSRLGYVHNSNS----YTNQGGTLLTDACLGVKYYLEPNYSYDGVSAAQRMPYDNLNHR 549
Query: 568 ----GFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKF-NEHTLDNQASFLNQLANVDF 622
+ I Q +++ +N+ +LP+ FASQ VKF + + NQ L +
Sbjct: 550 ADLNSYYPIKQFKQISILKNKQALPLIFASQSGQKKVKFLDNDPVHNQQKLWESLG-LSG 608
Query: 623 DYFSPILYE------KTENTDDLISVTSSSNEDAAIQYQIEVPENSQVYLSFTN-LHFSN 675
F + E K ++ L+ ++S + A++ + + N YL + F N
Sbjct: 609 QLFKKVKNEIKLTNLKVNQSNPLVFKKANSAKPASVTFSLTPKSNDSYYLQLPDGFDFKN 668
Query: 676 DKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLD 735
DI N E + D N+ +K + + NS + F+ +
Sbjct: 669 ASLSVNDIFYNYESR----DGQIRLVNIANQNKKSKIKVTFNLT-NSTLDLTGLIFWHFN 723
Query: 736 TQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQ 795
I+++K + + + ++ + Q TIPY K W Y +GK+++ +
Sbjct: 724 NSAFKAGIKQLKAPELKLKQTGLQISSQTFKSQKKLWITTIPYSKNWLVYYNGKRVKTSK 783
Query: 796 AQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGIYNHRQK 843
+ ++ GK +TL + P I G++ S +L ++ + Q+
Sbjct: 784 YAASLLAFNLKGGKHQLTLVYFPVSLIAGSLISLVTLAVYLLLKKEQR 831
>gi|116628951|ref|YP_814123.1| Predicted membrane protein [Lactobacillus gasseri ATCC 33323]
gi|116094533|gb|ABJ59685.1| Predicted membrane protein [Lactobacillus gasseri ATCC 33323]
Length = 903
Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats.
Identities = 161/602 (26%), Positives = 286/602 (47%), Gaps = 46/602 (7%)
Query: 42 GDGFHQYVIFDIALRNILHGN-GSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTN 100
GD +QY+ F R+++ GN S YTF++GLG + +YY+ S L+ +V+ F
Sbjct: 50 GDLPNQYLSFFQYYRHLVLGNWASAGYTFSNGLGGDMAGNIAYYVLSPLNFIVFLFPANK 109
Query: 101 MPDAVYLTTLLKFGLIGLSTYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLD 160
+ AVY+ L K GL+ + + + K F + L +Y+L ++V+ W D
Sbjct: 110 INIAVYVIILFKLGLMSGTFTWLILKWFNFKYQAYAIFLGIAYSLSGYSVAYAGNVMWFD 169
Query: 161 VFILIPLIITGLQILITKKKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKT 220
IL+PLI L I K+L Y L+ I NYY GYM +F++ +L +FK
Sbjct: 170 GLILLPLITYALVRGIKINKWLTYSILLACAIIFNYYIGYMICIFMVIIFLAYTINNFKD 229
Query: 221 RK---SSFLDFIITSVLAGMASLILILPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQ 277
K FL+F I+S+++G+ S I++LPTLF+L ++ KL + + F + + L + +
Sbjct: 230 IKLFFHQFLNFAISSIISGLISAIVLLPTLFNLSSN--KLAQ-SDFNSNFNIKLLITGGK 286
Query: 278 FIGS-FDTTKYGAIPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVL 336
+ F Y P IFVG L I+ I++F ++ I + S + L
Sbjct: 287 TVSRLFIGDTYNDWPPIFVGTLAAIIFIIYFIDSRNSVKARITNLIIGIIFVLSIIVRPL 346
Query: 337 DLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIY 396
LFW G + +R++++ ++ AA+ L+ + K + +++ + + L T+Y
Sbjct: 347 YLFWHGGQQTIAYPYRFSFLIVFWILLLAAKELS-YQNFKKKDRIIATTIYLLLSLMTVY 405
Query: 397 LKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQM 456
++ + E++ V +LL ++ F + N I++ L +VE+S NA + +
Sbjct: 406 IRRR------IGPNNFYEWIAVALVLLFGLLIYFSNKNFVRIILILVGLVELSGNAYTGL 459
Query: 457 DGIAKEWGF-----ASRSSYNRDIPAMESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNGI 511
+ + + A S IPA D + + +L G + FNY G+
Sbjct: 460 SHLGMKSDYYPKYVAENSEVISKIPA-----ADKTGRIAKNYELNNDRG-EGYTFNYRGV 513
Query: 512 SQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNISDNPIDK----- 566
+FSS + SS + LGF S Y +++ D++F ++ I+ + ++
Sbjct: 514 EEFSSNNDSRISSLMTDLGF--STFRYFYYYQTGTVVTDAIFNVKSFINSSLTNQSISPE 571
Query: 567 ---YGFKD-------IYQKDNLALYENQFSLPIAFASQFVYNDVKF-NEHTLDNQASFLN 615
YG +D I ++ + +Y N+ +LP AFA + N +KF +E+ + NQ LN
Sbjct: 572 YVNYGLRDDLKTRPVILKQGDKTVYRNE-TLPFAFAGN-LSNKLKFKDENPVYNQNLVLN 629
Query: 616 QL 617
L
Sbjct: 630 SL 631
>gi|56808872|ref|ZP_00366583.1| COG4485: Predicted membrane protein [Streptococcus pyogenes M49
591]
Length = 130
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 77/129 (59%), Positives = 100/129 (77%)
Query: 30 GIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFTSGLGLNFYALSSYYLGSFL 89
GIY+NSD + L D FHQYVIF RNI+HG+ S FYTFTSGLG+NFYAL YYLGSF
Sbjct: 2 GIYYNSDKTILASDAFHQYVIFAQNFRNIMHGSDSFFYTFTSGLGINFYALMCYYLGSFF 61
Query: 90 SPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSIPNPLKLALSTSYALMSFT 149
SPL++FF+LT+MPDA+YL TL+KFGLIGL+ +S ++L+ I L +++S Y+LMSF
Sbjct: 62 SPLLFFFNLTSMPDAIYLFTLIKFGLIGLAACYSFHRLYPKISAFLMISISVFYSLMSFL 121
Query: 150 VSQLEIKTW 158
SQ+E+ +W
Sbjct: 122 TSQMELNSW 130
>gi|156865089|gb|EDO58520.1| hypothetical protein CLOL250_00544 [Clostridium sp. L2-50]
Length = 925
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 176/757 (23%), Positives = 306/757 (40%), Gaps = 86/757 (11%)
Query: 143 YALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSILFIQNYYFGYMT 202
YAL S+ V WLD IL+P I ++ L K L Y L+ F+ NYYF +
Sbjct: 199 YALNSYVVVYNHNVLWLDGLILLPFIAIAVEHLAEGKWQLRYTLLLACAFLFNYYFAFYI 258
Query: 203 ALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASLILILPTLFDLQTHGEKLTEVTK 262
LF++ ++ Q + K S F SV+A + +++LP+L+ + L+
Sbjct: 259 CLFIVCYFFMQDWKNAKNLWSGVCRFFGWSVMAVSIAGMVVLPSLYAIMN----LSSCGN 314
Query: 263 FQTESSWYLDLFAKQFIGSFDTTKYGAIPMIF-----VGLLPFILTILFFTLKSIKFHVK 317
WY F+ SF + + +F G+L + +LF IK K
Sbjct: 315 GDYSLPWYRISNLGMFVNSFYPLRQISTGYLFSHNNYCGILVIMFFLLFLFGAGIKCSFK 374
Query: 318 LIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLNRLKEIKI 377
L Y FL + L+ G + +R+A+I ++ + RL+++K+
Sbjct: 375 LRYTAVILFLTIGLNMVGLNYVLHGFTITHGLGNRFAFILVFFILMAGYIGMLRLQQVKV 434
Query: 378 WNFLVSLFLIVTGFLATIYLK----SHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISV 433
W + + +T FL ++L + YS+ L F + Y +LL+ ++K I
Sbjct: 435 WQIISMSGIGITIFLLELFLNKEDANSYSYAA------VLLFGISYLILLILYVRKSIRY 488
Query: 434 NLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMESFSTDIGNQFTRTE 493
+ + + + +E+ NA QM YN + E ++D T E
Sbjct: 489 TTCYVWMIVLLCIEIFANAWIQMP-----------QKYNDERLQSEISASD---WLTDYE 534
Query: 494 KLQTQTGNDSMKF------NYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANNSI 547
+LQ G Y+ ++ +SSV N S LG S N+ Y +
Sbjct: 535 QLQLAEGERKTALVSQNYMPYSDVNWYSSVANGSIVDVFTSLGI-SRYQNIEYTYRGVTP 593
Query: 548 LADSLFGIQYNISDNP--------IDKYGFK-DIYQKDNLALYENQFSLPI----AFASQ 594
++ LF ++Y ++D ID+ K D Y+ DNLA S + A
Sbjct: 594 ISRQLFNVRYVVTDETGVAGGYRLIDRKNEKIDFYEADNLAGMGFLMSKDVLDWSGTAKT 653
Query: 595 FVYNDVKFNEHTLDNQASFL----------NQLANVDF--DYFSPILYEKTENTDDLISV 642
+DV +NQ + N +D D + + T + S
Sbjct: 654 EDTSDVFEKGSMAENQNELVKLVTGHKITQNAFTRIDIPEDAVTSAGMDITGQKNGEYSY 713
Query: 643 TSSSNEDAAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFT--TDNAFSF 700
S+++ +AI + ++ +Y L ++ K + +++ VN E T TD+A F
Sbjct: 714 ISTNDVFSAITVNLTAEKDEDLY-----LECADTKPQCIEVKVNDEVTVSTNYTDSA-DF 767
Query: 701 FNLGYTKEKKTFNINV--------SFPGNSQVSFESPTFYRLDTQTLTEAIQKIKE--QP 750
+++G KE I + + Q ++ Y LD Q + +A ++ E Q
Sbjct: 768 YHVGQVKEGDAVQIRMYAIRIRLYTTAVKDQEGTKAFALYSLD-QNVVKAFEEYTESHQM 826
Query: 751 VTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKG 810
+ N + ++ ++ +PY+KG+SA +GKK+ + TG M V V G+
Sbjct: 827 TFDGWTDNTLNGHITTEESGILYLAVPYNKGFSAVVNGKKVAPVKIGTGLMGVPVEAGEH 886
Query: 811 TITLSFIPNGFITGAICSFTSLLLFGIYN--HRQKSS 845
ITL++ + G S +L+ Y R+KSS
Sbjct: 887 VITLTYNTPYLMAGICLSVIGILILAGYVMISRKKSS 923
>gi|154685324|ref|YP_001420485.1| FhO [Bacillus amyloliquefaciens FZB42]
gi|154351175|gb|ABS73254.1| FhO [Bacillus amyloliquefaciens FZB42]
Length = 861
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 185/859 (21%), Positives = 343/859 (39%), Gaps = 95/859 (11%)
Query: 42 GDGFHQYVIFDIALRNILHGNGSLFYTFTSGLGLNFYALSSYYLGS-----FLSPLVYFF 96
GDG Q +F L + + NG LFY+++ GLG Y+ YY + F+S V F
Sbjct: 37 GDGIAQMAVFKKLLFD-QYMNGRLFYSYSFGLGGGVYSQLGYYFSTSFLFLFISAAVRFL 95
Query: 97 DL---TNMPDAVYLTTLLKFGLIGLSTY--FSLNKLFQSIPNPLKLALSTSYALMSFTVS 151
L T DA++ F ++ F+ +F+ A + + L ++
Sbjct: 96 QLIQLTGEADALFWAQASVFISFAKQSFIIFTAACVFRYFVKRTVPAFAGA-VLYGVSII 154
Query: 152 QLEIKTWLDVF----ILIPLIITGLQILITKKKFLLYFTSLSILFIQNYYFGYMTALFL- 206
+ + D F + +PL++ G + +I +KK + + ++ I N+YF Y+ +F+
Sbjct: 155 YFRHEVYWDFFTDSMVWLPLLVLGAEKIIREKKPAWFIFACALTLINNFYFAYINLIFIG 214
Query: 207 ---IFWYLCQISWDFKTRKSSFLDFIITSVLAGMASLILILPTLFDLQTHGEKLTEVTKF 263
+F ++ + + R + FI++ +L S + +P ++ L +
Sbjct: 215 IYILFRWVIPLEGNETKRLTQCRIFILSGLLGFGISAVSFIPVVYGY------LHNLRPP 268
Query: 264 QTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIF 323
+E +LD F+ + S A ++F+ LF I L+Y +F
Sbjct: 269 YSEHIAWLD-FSDNILFSSRIIILPAAFLLFLFTFTLYKNRLFRLFAGIS----LLYILF 323
Query: 324 -FTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLNRLKEIKIWNFLV 382
F+ AS + G P +R+ ++ + T + L++L +I + + L+
Sbjct: 324 HFSPFAASAF--------NGFSAPQ---NRFEYVLCFTIAGTVSVGLSKLSDISMKSMLM 372
Query: 383 SLFLIVTGFLATIY-----LKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFA 437
S L+V + + + + H + L ++L++ L + +V L
Sbjct: 373 SAVLVVLLYWSQVRRYSLDISDHANLPVILLLVLSIAAFFAAKTRLKGAVPAVYAVILLT 432
Query: 438 ILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMESFSTDIGNQFTRTEKLQT 497
+++ + +L+ ++ ++ + + ++ + F R + +
Sbjct: 433 AVLTANTYEKYALSEGGKIYTVSHTFMTGADYKGKEQSELIQRLKEKDPDPFARLDWMNG 492
Query: 498 QTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYA---NNSILADSLFG 554
N + + +NG S +SS+ NR+ S G RYA N + L L+G
Sbjct: 493 VFNNTPIIYGFNGFSVYSSILNRNLLSFYWHDLQIDMGRESVSRYATLGNRANLYSLLYG 552
Query: 555 IQYNI--SDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEHTLDNQAS 612
Y ++ YGFK I + + A+Y+NQ+ LP + VYN E L +
Sbjct: 553 KYYMTEKTNEAGVPYGFKKIMESTHYAVYQNQYMLPFVRTADRVYN-----EGGLKKAPA 607
Query: 613 FLNQLANVDFDYFSPILYEKTENTD------DLISVTS-------------SSNEDAA-- 651
+ A +D ++ T NT ++I T + NED
Sbjct: 608 LARERAMLD----GIVMESSTTNTKKAPEAKNMIRRTEVAAEHGDYHNGILTVNEDGGGL 663
Query: 652 -IQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYT---- 706
I Q ++ Y+SF + +K K + T T + S + G
Sbjct: 664 VITPQAAKMDSGDYYVSF----YLKNKAKDQGFTLKVNDYTTTRKSNQSIYKTGVNDVTV 719
Query: 707 KEKKTFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQP-VTVSTSKNKVFATYD 765
+ KT NI + P S + Y TL A +K +++P +S N + +Y+
Sbjct: 720 RVPKTKNIQIRLPKGS-YQLDRLALYEERYDTLKSAYRKAEKEPRADLSWRGNTLHISYE 778
Query: 766 VQQDTS-IFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITG 824
+ I IPY+KGW +G++ +I++A F+ KGK I L++ P F
Sbjct: 779 NKTRAPYIMLPIPYEKGWELKINGRQEQIEKADYSFIGFKAQKGKNDIQLTYYPPFFKPA 838
Query: 825 AICSFTSLLLFGIYNHRQK 843
A S SL+ IY RQK
Sbjct: 839 AALSVISLVFSAIYVRRQK 857
>gi|116332859|ref|YP_794386.1| Predicted membrane protein [Lactobacillus brevis ATCC 367]
gi|116098206|gb|ABJ63355.1| Predicted membrane protein [Lactobacillus brevis ATCC 367]
Length = 853
Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 84/366 (22%), Positives = 164/366 (44%), Gaps = 18/366 (4%)
Query: 16 IIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFTSGLGL 75
++ +++M+ ++ +GI + + L+GD QY F ++ + F LG
Sbjct: 19 LLALMMMVTLFALRGITPFGNHNLLIGDLGVQYTPFFTDFVRLVRQHTWSFMNLHQALGG 78
Query: 76 NFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSIPNPL 135
N+ + SYY+ S + L++ + +P + + +LK I + F L +++
Sbjct: 79 NWMPVISYYILSPFNLLLFVGRASQIPVMIAVIIMLKVATIAGTMTFYLQAHWRTTSR-F 137
Query: 136 KLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSILFIQN 195
L ++A F WLD I +PL+ G+ L+ + + YF L + + +
Sbjct: 138 VLVFGLAFAFSGFVALNFFNVMWLDALIWLPLVTWGVDQLVRTGRTVAYFGWLFVSVVTD 197
Query: 196 YYFGYMTALFLI--FWYLCQISWD--------FKTRKSSFLDFIITSVLAGMASLILILP 245
YY GYMT LF++ F Y+ W + ++ FI+TS+L+ +L ++LP
Sbjct: 198 YYLGYMTCLFIVAYFGYVITAEWPKGQSVRAWWHQQRGLIWRFIVTSLLSVGTTLAILLP 257
Query: 246 TLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKY----GAIPMIFVGLLPFI 301
T+ + + ++ F ++ L+ F++ +G TT Y P IFV +
Sbjct: 258 TVLSMLKTPKASAGLSNFFLVPTFGLEFFSQLGMG---TTTYLQRLNHAPGIFVSTFVAL 314
Query: 302 LTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLL 361
L +++F L +K K+ A + ++ + W + P + R ++ FS +L
Sbjct: 315 LVLVYFALPQVKRGAKVRSASLLLVVFLGMWLRGFNTVWHMLSAPAGYPFRNSFFFSFVL 374
Query: 362 IYTAAE 367
I AA+
Sbjct: 375 ILLAAD 380
>gi|52079316|ref|YP_078107.1| conserved membrane protein YfhO [Bacillus licheniformis ATCC 14580]
gi|52784681|ref|YP_090510.1| YfhO [Bacillus licheniformis ATCC 14580]
gi|52002527|gb|AAU22469.1| conserved membrane protein YfhO [Bacillus licheniformis ATCC 14580]
gi|52347183|gb|AAU39817.1| YfhO [Bacillus licheniformis DSM 13]
Length = 861
Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 187/872 (21%), Positives = 363/872 (41%), Gaps = 121/872 (13%)
Query: 42 GDGFHQYVIFDIALRNILHGNGSLFYTFTSGLGLNFYALSSYYLGS---FLSPL--VYFF 96
GDG Q +IF L + G+ FY+++ GLG Y+ YY + F++ V+
Sbjct: 37 GDGLAQMIIFKSFLFE-QYKQGNFFYSYSFGLGGGIYSQLGYYFTTSFVFIASFAAVFLM 95
Query: 97 DLTNMP---------DAVYLTTLLKFGLIGLSTYFSLNKLFQSIPNPLKLALSTSYALMS 147
L ++ A +++K LI L+ ++LN + ++ KLA T L
Sbjct: 96 QLLHLAGDADPLFWAQAAVFISVIKLSLIILAAAYALNGMVKN-----KLAAFTGAVLYG 150
Query: 148 FTVSQLEIKTWLDVF----ILIPLIITGLQILITKKKFLLYFTSLSILFIQNYYFGYMT- 202
+V + + F + +PL++ G + +I +K+ L+ T+ S+ I N+YF Y+
Sbjct: 151 TSVIYFRHTVFWEFFSDAMLWLPLLVAGAEKVIREKRTALFITACSLTLINNFYFAYINL 210
Query: 203 ---ALFLIFWYLCQISWDFKT-RKSSFLDFIITSVLAGMASLILILPTLFDLQTHGEKLT 258
A+++IF +L ++ + + R F F + +++ S I +P ++ +
Sbjct: 211 IFIAIYIIFRWLIRLDPEKEAPRWKQFRMFAASGLISFGISAISFVPAVYGFLNN----- 265
Query: 259 EVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTLKSIKFHVKL 318
L Q + +D T V LLP + + F K
Sbjct: 266 ------------LRPPYDQAVAVYDLTDNILFSSRIV-LLPAVFMLFLFAFSFYKNKTFR 312
Query: 319 IYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLNRLKEIKIW 378
++A L+ Y + + G P +R+ ++ + + AA + LK I+
Sbjct: 313 LFASISVLLVLLHYSPLAASAFNGFSAPQ---NRFEYLLAFTIGGAAAAGMTELKNIRRK 369
Query: 379 NFLVSLFLIVTGFLATIYLKS-HYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLF- 436
+ S+ L++ ++A I+ K S + + +I++ L FL + + A ++ LF
Sbjct: 370 EMIWSILLVLLVYIAVIWRKDLDLSLMQNWSIIVLL-FLTI--AIFTAAGFQYKKSQLFL 426
Query: 437 --AILISLFIMV----EMSLNASSQMDGIAKEWGFASRSSYNRDIPAMESF-STDIGNQF 489
IL+S ++ + L+ SS + + K + ++ + + + D G+ +
Sbjct: 427 HVCILLSSVLVANTYQKYVLSESSGIKNVTKSYLTSNEYNGEEQRRLLNNIRKDDKGDPY 486
Query: 490 TRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNL------RYA 543
TR + + N + ++NG S +SS+ NR D L F +++ RYA
Sbjct: 487 TRIDWMNGVRNNTPLMQDFNGFSAYSSILNR------DLLLFYWEDLQIDMGRESVSRYA 540
Query: 544 ---NNSILADSLFGIQYNIS-DNPID-KYGFKDIYQKDNLALYENQFSLPIAFASQFVYN 598
+ + L L+G Y DN + YGF + ++ +Y+N+++LP ++ ++
Sbjct: 541 SMGDRANLYSLLYGKYYMTEKDNAANVPYGFIQTDESEHYTVYKNKYTLPFIRTARTLFT 600
Query: 599 D-------VKFNEHT------LDNQASFLNQLANV-DFDYFSPILYEKTENTDDLISVTS 644
+ V EH L+N + Q +V D + + E + + VT+
Sbjct: 601 EKALADAPVLAREHAMLEGIVLENGGNGKEQPPSVPDLMKQTKLKTEGASYHNGFLDVTA 660
Query: 645 SSNEDAAIQYQIE--VPENSQVYLSFTNLHFSNDK--QKKVDILVNSEKKTFTTDNAFSF 700
E+ I E VP+ Y+ F + D+ +V+ V S K S
Sbjct: 661 ---ENGGIDLIPEGGVPKEGDYYVGFYLKSLAKDQFFNLRVNDYVTSRKSN------QSI 711
Query: 701 FNLGYTKEKKTFNINVSFPGNSQVSFESPT-FYRLDTQTLTEAIQKI-------KEQPVT 752
+ G +++ + P ++S P Y+LD L + ++ K
Sbjct: 712 YKTG------VYDLTIRVPKTDKISIRLPKGKYQLDHLRLHQEDYQLLKKAAAKKTPAAD 765
Query: 753 VSTSKNKVFATYDVQQ-DTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGT 811
++ N+V ++D Q D + +PY+KGW +GK +++A F+ + + KGK
Sbjct: 766 LNWRNNQVSISFDNQNGDRYMVLPVPYEKGWEVTVNGKTQTVQKANYAFIGIPIEKGKNN 825
Query: 812 ITLSFIPNGFITGAICSFTSLLLFGIYNHRQK 843
I L + P F + SL++ Y+ R+K
Sbjct: 826 IRLVYYPPYFKATLAVTVISLIIGIWYSRRRK 857
>gi|81096945|ref|ZP_00875267.1| putative transmembrane protein [Streptococcus suis 89/1591]
gi|80977011|gb|EAP40572.1| putative transmembrane protein [Streptococcus suis 89/1591]
Length = 371
Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats.
Identities = 102/344 (29%), Positives = 163/344 (47%), Gaps = 23/344 (6%)
Query: 11 YFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRN-ILHGNGSLF-YT 68
Y VS +P++IM+ V+L GIY S + D QY+ F L++ IL G+ S F Y+
Sbjct: 24 YIVSSTLPMLIMLVVWLCIGIYPFGSKSLMAVDFGQQYISFYGFLKSTILSGDWSGFLYS 83
Query: 69 FTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLF 128
FT LG + + +YYL S + + L++ AV+LT L++G IG+S + L K +
Sbjct: 84 FTKSLGGDMLGVLAYYLLSPFNLIYVITPLSHFSLAVFLTIWLRYGAIGMSFAYLLIKRY 143
Query: 129 QSIPNPLKLA--LSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFT 186
+ + L +ST+YAL VS + D I++PL+I L+ L+ K Y
Sbjct: 144 RGLDATAWLVPLMSTAYALSGMLVSYQMNPIFYDAMIMLPLVIVALEELLDGGKPFRYIW 203
Query: 187 SLSILFIQNYYFGYMTALFLIFWYLCQIS--------WDFKTRK--SSFLDFIITSVLAG 236
+L++ +Y GYM +LF+ + +S W K R S L I SV+
Sbjct: 204 TLALTIFTQFYMGYMISLFVAMYACFYVSPRLSIVGDWRQKLRNFFSPLLKAFIYSVIGV 263
Query: 237 MASLILILPTLFDLQTHGEKLTEVTKFQTESSWY-LDLFAKQFIGSFDTTKYGA----IP 291
+L+ P + +L ++ +F D+ +K IG FDT+ + +P
Sbjct: 264 GLVAVLLYPVVLNLMQSKGQVGSGMEFSFALQINPFDILSKLTIGGFDTSSGWSAGPNLP 323
Query: 292 MIFVGLLPFILTILFF----TLKSIKFHVKLIYAIFFTFLIASF 331
I++G L IL+F T ++ K +I IFF I F
Sbjct: 324 NIYIGALALFGFILYFRFAETHRNQKIGACIILVIFFVSFINEF 367
>gi|16077927|ref|NP_388741.1| hypothetical protein BSU08610 [Bacillus subtilis subsp. subtilis
str. 168]
gi|2633184|emb|CAB12689.1| yfhO [Bacillus subtilis subsp. subtilis str. 168]
gi|2804545|dbj|BAA24481.1| YfhO [Bacillus subtilis]
Length = 819
Score = 99.8 bits (247), Expect = 8e-19, Method: Composition-based stats.
Identities = 176/846 (20%), Positives = 343/846 (40%), Gaps = 104/846 (12%)
Query: 60 HGNGSLFYTFTSGLGL-NFYALSSYYLGSFL----SPLVYFFDLTNM---------PDAV 105
+ +G+ FY ++ GLG F L Y+ SFL S V+ + ++
Sbjct: 12 YTHGNFFYNYSFGLGGGTFSQLGYYFSASFLFLAVSAAVWLLQAVQLIGETDTLFWAESA 71
Query: 106 YLTTLLKFGLIGLSTYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILI 165
++ K LI ++ + L + A+ +++ F + + + D + +
Sbjct: 72 VFISIFKLSLIIFTSASVFHYLLKHRAASFTGAVLYGVSIIYFR-HEAYWEFFTDTMVWL 130
Query: 166 PLIITGLQILITKKKFLLYFTSLSILFIQNYYFGYMTALFL----IFWYLCQISWDFKTR 221
PL++ G + +I +++ + + S+ I N+YF Y+ +F+ +F +L ++ + R
Sbjct: 131 PLLVLGAEKIIRERRPAWFIVACSLTLINNFYFAYINLIFIGIYVLFRWLIRLEPHEEKR 190
Query: 222 KSSFLDFIITSVLAGMASLILILPTLF----DLQTHGEKLTEVTKFQTESSWYLDLFAKQ 277
F+++ ++ S +P ++ +L+ + E F LF+ +
Sbjct: 191 WIQIRLFLVSGFISFGISAAAFVPVVYGFLNNLRPPYSQKIEWLNFDDNI-----LFSSR 245
Query: 278 FIGSFDTTKYGAIPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLD 337
I +P F L F+ I F+ + + L +F F + + V +
Sbjct: 246 II---------IVPAAF---LLFLFIISFYKNRVFRLFAGL-SLLFILFHFSPYAASVFN 292
Query: 338 LFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATI-- 395
G P +R+ ++ + + AA L++L E+K L + +++ +L I
Sbjct: 293 ----GFSAPQ---NRFEYVLAFTIAGAAAAGLSQLSELKRKELLPAAAVVLLLYLYHIQR 345
Query: 396 YLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILISLFIM---VEMSLNA 452
Y + + +LL L + A + ++V IL SLF+ + +L+
Sbjct: 346 YKLDIWKPANESILLLLLMTIAALFAAAFAKKRAKMAVYGIIILSSLFVANSYQKYALSE 405
Query: 453 SSQMDGIAKEWGFASRSSYNRDIPAMESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNGIS 512
+D + KE+ + + + + R + + N + + +NG S
Sbjct: 406 GGDLDSVTKEYLTSEEYRGRESSELIRRLQKEDDDPLMRIDWMNGVRNNTPIIYGFNGFS 465
Query: 513 QFSSVRNRSASSTLDKLGFKSSGTNLNL------RYA---NNSILADSLFGIQYNI--SD 561
+SS+ N+ D L F + ++++ RYA + + L L+G Y ++
Sbjct: 466 AYSSILNK------DLLAFYWNDLSIDMGRESVSRYASLGDRANLYSLLYGKYYMTEKTN 519
Query: 562 NPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNE-HTLDNQASFLNQLANV 620
YGFK + ++ A+YENQ+ LP + +Y++ + + L + + L +
Sbjct: 520 EASVPYGFKKHLETEHYAVYENQYMLPFVKTADAIYSESELDRLPALAKEQAMLKGIILK 579
Query: 621 D-------------FDYFSPILYEKTENTDDLISVTSSSNEDAAIQYQIEVPENSQVYLS 667
D S I ++ + + L++VT + + I + Y+S
Sbjct: 580 DPSGKTEQTPKPSNLITKSDITAKQAQYQNGLLTVTGENGGELIITPKQPSSAPGDYYVS 639
Query: 668 FTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGNSQVSFE 727
F S K K + VN T ++ S + G NI V P + +S
Sbjct: 640 F--YLKSKAKDKGFTLKVNDYVTTRKSNK--SIYKTGVN------NITVRVPKSGHISIN 689
Query: 728 SP---------TFYRLDTQTLTEAIQKIK-EQPVTVSTSKNKVFATYDVQQDTSIFFTIP 777
P Y + QTL A+ + K E+ ++ +KN++ +Y + +D I IP
Sbjct: 690 LPKGTYELRNIALYEENYQTLKNAVMQNKTEKADKLNWNKNRLTFSYHLSKDQYIMLPIP 749
Query: 778 YDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 837
Y+KGW +GK +I++A F+ KG I L++ P F AI S SLLL
Sbjct: 750 YEKGWELKINGKTQKIEKADYAFIGFKAQKGDNHIELTYYPPYFKISAIISLVSLLLAVF 809
Query: 838 YNHRQK 843
Y R+K
Sbjct: 810 YIRRKK 815
>gi|153812386|ref|ZP_01965054.1| hypothetical protein RUMOBE_02785 [Ruminococcus obeum ATCC 29174]
gi|149831548|gb|EDM86635.1| hypothetical protein RUMOBE_02785 [Ruminococcus obeum ATCC 29174]
Length = 601
Score = 99.0 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 106/433 (24%), Positives = 190/433 (43%), Gaps = 42/433 (9%)
Query: 429 KFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMESFSTDIG-- 486
KFI F ++ ++I VE+ N S + A G S Y D E F++ G
Sbjct: 181 KFIHKKWFKSVVCVWISVELLFNGYSIVKSFAPVEGH-KYSEY--DEQQQERFNSLEGSD 237
Query: 487 NQFTRTEKLQTQ----------TGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGT 536
+ F RTE+ N+ ++F Y+ + ++S N + + K G+
Sbjct: 238 DDFYRTEQASVAGEDKGANYLGVFNEGLQFGYHSFATYTSTINSALTELYHKCGYHDYYK 297
Query: 537 NLNLRYANNSILADSLFGIQYNISDNPIDKYGFKDIYQK--DNLALYENQFSLPIAFASQ 594
+ +Y +L DSL+GI+Y ISD+ I+ KDI ++ ++Y N ++L + + Q
Sbjct: 298 FM--QYNEPLLLTDSLWGIKYIISDHDIEGCK-KDIDAGVINDKSVYLNPYALNLGYRVQ 354
Query: 595 FVYNDVKFNEHTLDNQASFLNQLANVDFDYFSPILYEKTENTDDLISVTSSSNEDAAIQY 654
+ E+ + Q L+ L + F + +KT D ++
Sbjct: 355 DADIENIEAENAFEYQNMLLSTLLGENIQCFKKVDSQKTVLED-------------GDEF 401
Query: 655 QIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKK--TF 712
QI+VPE + + + H + + V + + T++ ++ F + ++ T
Sbjct: 402 QIKVPEQEHILYGYID-HVIKNAAQTVIFINGKARTTYSRVTSYKTFQIDDPEQSDIATV 460
Query: 713 NINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVST-SKNKVFATYDVQQDTS 771
+ + P ++ FY LD + AI+K+K + + ++ V TY +D
Sbjct: 461 TLKGNIPNKDELE---GVFYYLDMREFRAAIEKLKTEMFQIEDYTEGSVTGTYTATEDNE 517
Query: 772 -IFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFT 830
+ TIPYDKGW +GK + +T F + + KG+ IT+ +I GF GAI S
Sbjct: 518 KLMLTIPYDKGWRIECNGKTVTADADRT-FTVLTMNKGENKITMKYISPGFREGAIISLL 576
Query: 831 SLLLFGIYNHRQK 843
++LLF I+ +K
Sbjct: 577 AILLFVIWQRAEK 589
>gi|30023461|ref|NP_835092.1| Multidrug resistance protein B [Bacillus cereus ATCC 14579]
gi|29899022|gb|AAP12293.1| Multidrug resistance protein B [Bacillus cereus ATCC 14579]
Length = 892
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 178/841 (21%), Positives = 350/841 (41%), Gaps = 80/841 (9%)
Query: 42 GDGFHQYVIFDIALRNILHGNGSLFYTFTSGLGLNFYALSSYYLGS----FLSPLVYFFD 97
GD Q+ F L++ +G+LF+++ GLG + + SYY + +L+ L+ +
Sbjct: 44 GDALSQFSFFTFLLQHAFK-DGNLFWSWDYGLGGDLFGEFSYYYSTAPFFWLTLLLPKLN 102
Query: 98 LTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKT 157
+ + ++LK L L Y SL ++I + A+ ++F L
Sbjct: 103 FDQIFEMKLYMSILKSTLAMLFMYGSLRYHNKTIFSSFISAIIYG-GCVTFIRHSLLWDF 161
Query: 158 WLDVFILIPLIITGLQILITKKKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQ--IS 215
D + +PL+I GL I ++K L+ + +++ N+YF ++T++F+ + Q +
Sbjct: 162 MADAIVFLPLVIWGLDKYILERKKGLFLFATALMLASNFYFAFITSIFIYIYAFFQYFAT 221
Query: 216 WDFKTRKSSFLDFIITSVLAGMA---SLILILPTLFDLQTHGEKLTEVT-KFQTESSWYL 271
KT K+ + +I + L ++ S + +P++ + + T+ T E ++Y
Sbjct: 222 QQNKTIKTFIIYYIRIAFLYALSLGLSAVCFIPSVNGVFSSDRLATKFTIPLFFEGTFYK 281
Query: 272 DLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTLKSIKFHVKLIY-AIFFTFLIAS 330
+L F + +T Y L F + ILF ++ KL+ + FT +
Sbjct: 282 NLMESIFFIN-NTEDYQ---------LAFPVFILFLITSALLIRNKLVTNKLTFTGFMLV 331
Query: 331 FYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLN--RLKEIKIWNFLVSLFLIV 388
Y+ L + + + +R+ ++F+ ++ T A +L+ L + K+ N L+ L
Sbjct: 332 LYM--LPYTYSVFNGFSAMQYRWFYLFAFVVAQTVAYILDWMLLNKQKV-NSLIGPLLAT 388
Query: 389 TGFLATIYLKSHYS---FLTDLNILLTLEFLVVYSLLLLAVIKK-----FISVNLFAILI 440
T F+ Y K + + T IL+ L + ++LL + K FI +N+ +I
Sbjct: 389 TLFIYAFYRKVNINAQPLQTIDKILICTTVLSIITILLWRYLSKVALQCFIVLNVLVNVI 448
Query: 441 SL-FIMVEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMESFSTDIGNQFTRTEKLQTQT 499
+ + + +L+ G+ KE +I A+ + + F R
Sbjct: 449 FINYFYSDFALSKHFNQAGVTKESLHGPGLDNKDEIDAIR-YIQNQDKDFYRIINPNNNY 507
Query: 500 GNDSMKFNYNGISQFSSVRNRSASSTLDK-----LGFKSSGTNLNLRYANNSILADSLFG 554
N M Y+G S + S+ N + G+ S L + + +++ G
Sbjct: 508 KNTPMLQGYHGTSTYQSLVNYHVHDFMKNKYNVFQGYDSPSMFFQL---DKRLFLENMLG 564
Query: 555 IQYNISDNPIDK----YGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEHTLDNQ 610
++Y + +K YG+K + Q +Y+N+F+LP+ + + +D +F++ +
Sbjct: 565 VKYYVLSEGANKTEIPYGYKHLQQVGPYNIYKNEFALPLGYVYEAGISDEEFSKLNFAEK 624
Query: 611 ASFLNQLANVDFDYFSPILYEKTENTDDLISVTSSSNEDAAIQYQIE-------VPENSQ 663
L V+ P+ K NT L S N + IE V EN +
Sbjct: 625 DQLLLDAVVVNDVGSLPL---KQFNTKQLDSKQIKINPNKMKWENIEKEKDILTVHENGR 681
Query: 664 VYLSFTNLHFSND--------KQKKVDILVNSEKKTF---TTDNAFSF------FNLGYT 706
+ + N D KV V K+ D A+++ +NLG
Sbjct: 682 IIVPIDNNDMLGDLLVEIKIRNINKVSFGVTVNNKSMIKGNEDGAYAYPLERFVYNLG-- 739
Query: 707 KEKKTFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPV-TVSTSKNKVFATYD 765
K+ K + +S P Q + + QT+ + + +KE + + N + +
Sbjct: 740 KDAKPTELIISIPTPGQYELKDLQINSTNYQTVPKKVNTLKENSLQNIYYEGNSLKGDIN 799
Query: 766 VQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGA 825
+D ++ ++PY KGWS DGK+ E +A + F+ V + KG+ + + ++ F G
Sbjct: 800 STKDGLLYLSVPYSKGWSIKVDGKETEFTKANSAFIGVPISKGQHVVEMKYVTPYFKMGL 859
Query: 826 I 826
+
Sbjct: 860 V 860
>gi|153812385|ref|ZP_01965053.1| hypothetical protein RUMOBE_02784 [Ruminococcus obeum ATCC 29174]
gi|149831547|gb|EDM86634.1| hypothetical protein RUMOBE_02784 [Ruminococcus obeum ATCC 29174]
Length = 181
Score = 94.4 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
Query: 6 KTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSL 65
K W Y + F+I +++ ++ GIY + S L+ D QY+ F + +L G G L
Sbjct: 7 KKVWVYSIPFLITAAMLLVIFYKAGIYPFGEKSLLIWDLRWQYIQFFSWFKQVLTGRGDL 66
Query: 66 FYTFTSGLGLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLN 125
FY+F +G+G N L +YYL S L+ L+ FFD ++ V + T+LK L ++ F +
Sbjct: 67 FYSFNAGMGSNMIGLYAYYLASPLNLLILFFD--DIQIFVLVLTILKLALAASASAFFIR 124
Query: 126 KLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKK 180
F ++ N + L+T Y +MS+ +SQ WLD I++PLI G+ +T+KK
Sbjct: 125 NRFPAVDNVWTIVLATCYGMMSYGISQKCNLMWLDALIMLPLICIGVYRFVTQKK 179
>gi|75759892|ref|ZP_00739965.1| Integral membrane protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74492627|gb|EAO55770.1| Integral membrane protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 932
Score = 94.0 bits (232), Expect = 5e-17, Method: Composition-based stats.
Identities = 183/871 (21%), Positives = 363/871 (41%), Gaps = 93/871 (10%)
Query: 16 IIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFTSGLGL 75
I+PI+++ ++ GD Q+ F L++ +G+LF++F GLG
Sbjct: 62 IMPILLLCAFAFHYFFLTSNQAFSGTGDALRQFGFFTFLLQHAFK-DGNLFWSFDYGLGG 120
Query: 76 NFYALSSYYLGS----FLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSI 131
+ + SYY + +++ L+ L + D ++LK L L Y SL ++
Sbjct: 121 DLFGEFSYYYSTSPFFWITLLLPKLSLEQVYDVKLYMSILKNFLAMLFMYGSLRYHNKTA 180
Query: 132 PNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSIL 191
+ A+ ++F L D + +PL+I GL I +KK L+ + +++
Sbjct: 181 FSSFVAAIIYG-GCITFIRHSLLWDFMADAIVFLPLVIWGLDKYIIEKKRGLFLIAATLM 239
Query: 192 FIQNYYFGYMTALFLIFWYLCQISWDFKTRKS----SFLDFII----TSVLAGMASLILI 243
N+YF ++T++F+ + L Q F T+K+ SFL + I L+ + +
Sbjct: 240 LASNFYFAFITSIFIFIYALFQY---FATQKNKTIVSFLTYYIRIGLLYGLSLGLAAVCF 296
Query: 244 LPTLFDLQTHGEKLTEVTKFQT----ESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLP 299
LP++ + ++L++ KF+ E +Y DL F A+P + + L+
Sbjct: 297 LPSV-NAVFSADRLSK--KFEIPLLFEDKFYKDLMENIFFMYSAENHQLALPALILFLIV 353
Query: 300 FILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFST 359
F + I +K+ F ++ +F S + + + + + + A+I
Sbjct: 354 FGMFIRDKLVKNKVFFTLFMFILFMLPYTYSVFNGFSAMQSRWFYLFVFVMPKQAYILDW 413
Query: 360 LLIYTAAEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYSF----LTDL-NILLTLE 414
++I+ K+ K+ +L+SL + + F+ Y K++ + L D+ NILL
Sbjct: 414 MIIHK--------KDYKL-PYLISLLVSIGLFIYAFYRKANINVTDKPLQDVDNILLGTV 464
Query: 415 FLVVYSLLLLAVIKKFISVNLFAILISLFIMVE-MSLNASSQMDGIAKEWGFASRSSY-- 471
L V ++ L ++IS L+ L I+V +S+N + ++ +G + S+
Sbjct: 465 VLSVITVCLW----RYISKPFIQFLVVLNILVSTISMNYMYANNILSTVYGQSQISTEKL 520
Query: 472 ------NRDIPAMESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASST 525
N++ A + + F R ++ N M Y+G+S + S+ N
Sbjct: 521 HEPGYDNKEEIAAIRYIQENDKDFYRILNPYSEY-NTPMLQGYHGVSTYQSLVNYYVHDF 579
Query: 526 L-DKLG-FKSSGTNLNLRYANNSILADSLFGIQYNISDNPIDK----YGFKDIYQKDNLA 579
+ +K G F+ T A++ +L +++ GI+Y + D YG+K + Q
Sbjct: 580 MKNKYGVFQMYDTPSMFYQADSRLLLENMLGIKYRVLSADTDPKNVPYGYKLLQQVGPYN 639
Query: 580 LYENQFSLPIAFASQFVYNDVKFNEHTLDNQASFL------NQLANVDFDYFSPILYEKT 633
+Y+N ++LP+ + ++ +F++ + L N ++F
Sbjct: 640 IYKNNYTLPLGYVYDSAISEEEFSKLNFAQRDQLLLHAVVVNNTKEFSLNHF-------- 691
Query: 634 ENTDDLISVTSSSNEDAAIQYQIEVPENSQVYLSFTNLHFS-NDKQKKVDILVNSEKKTF 692
N DL S S + A + N + F N+ N D+L+ + K
Sbjct: 692 -NKQDLKSKAVSIKMEKAKFENMVKEGNKLIVHGFGNMILPINYPNTPGDLLIELKLKNT 750
Query: 693 TTDNAF----------SFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRL-------- 734
T NA Y E+ +N+ P N +S + Y L
Sbjct: 751 GTFNATVNGKTIGKGDDAGAYSYPLERFVYNLGTERPENLTISIDMAGEYELGDLQANIV 810
Query: 735 DTQTLTEAIQKIKEQPV-TVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEI 793
+ +++ + +K+ E + + N + + +D ++ ++PY KGW+ DGK+ E
Sbjct: 811 NYESVQKETKKLTENRLENIYYKNNYLKGDINSNKDGLLYLSVPYSKGWTIKVDGKEKEF 870
Query: 794 KQAQTGFMKVDVPKGKGTITLSFIPNGFITG 824
+A + F+ V + KG I ++++ F G
Sbjct: 871 TKANSAFIGVPITKGSHVIEMTYVTPYFKLG 901
>gi|81096944|ref|ZP_00875266.1| putative transmembrane protein [Streptococcus suis 89/1591]
gi|80977010|gb|EAP40571.1| putative transmembrane protein [Streptococcus suis 89/1591]
Length = 595
Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 120/495 (24%), Positives = 209/495 (42%), Gaps = 57/495 (11%)
Query: 386 LIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILISLFIM 445
L + G + I L+ Y FLT + + + + +++ S +L + ++ I++++F
Sbjct: 113 LTIVGMTSIILLQQGY-FLTQVVLTVIVWIVILLSFVLQQNRLTWTTL----IIVTIF-- 165
Query: 446 VEMSLNASSQMDGIAKEWGFASRSSYNRDIPAMESFSTDIGNQFTRTEKLQTQTGNDSMK 505
E+ NA + R + +S + +F R + +
Sbjct: 166 -ELGYNAYLSQSTFFYADAYKFRDATISVKRVTDSIRDNTETKFYRIGSSFSYSKTAPTL 224
Query: 506 FNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQY-------- 557
+Y G+S FSS RS LG G N +YAN + L D+L+G++Y
Sbjct: 225 LSYPGLSSFSSSLERSTMDLFSYLG--DVGVNAATQYANGTALTDALYGVRYYMDIKEYT 282
Query: 558 --NISDNP-------------IDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKF 602
+ +NP + +Y +Y+ +YEN IAF + + ++KF
Sbjct: 283 QEEVENNPQKMYFTRHSKRFDLAEYYTNAVYEDGRYIVYENPNVFSIAFGTNTLVQNIKF 342
Query: 603 N-EHTLDNQASFLNQLANVDFD---YFSPI---------LYEKTENTDDLISVTSSSNED 649
+ + NQ LN +A D YF + E T + ++I N+
Sbjct: 343 GFNNPVANQNIILNSMAGDTKDQVGYFQTFGFSGFETQNMEETTNDKGEIIYNRIDKNQP 402
Query: 650 AAIQYQIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFS---FFNLGYT 706
I+Y+I +P++S Y F + N + K+ IL+N+ K T +FS + L
Sbjct: 403 GIIRYKI-IPKSSYTYY-FLTPYLLNQAEGKLSILLNN--KWLTNQKSFSQRQLWQLTSN 458
Query: 707 KEKKTFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNK-VFATYD 765
E + + + + ++ VS R D + + + EQ +TV+ N V +
Sbjct: 459 TEGQETVLELRYSMDN-VSLNGAGLVRADNDAIKRVLAERLEQNMTVTEWSNTCVKGVVN 517
Query: 766 VQQDTSIFFT-IPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITG 824
+ D+SI T IPY KGW+ DGK + K+A + + GK TI +SF P G G
Sbjct: 518 ITDDSSIMMTTIPYSKGWTVKVDGKAVMTKKAWNSLLSFPISAGKHTIEISFFPQGLFIG 577
Query: 825 AICSFTSL-LLFGIY 838
A+ S L ++ G+Y
Sbjct: 578 AMLSLVFLGVVIGLY 592
>gi|153166407|ref|ZP_01926993.1| hypothetical protein LMHG_02093 [Listeria monocytogenes FSL N1-017]
gi|133727604|gb|EBA29302.1| hypothetical protein LMHG_02093 [Listeria monocytogenes FSL N1-017]
Length = 952
Score = 87.0 bits (214), Expect = 5e-15, Method: Composition-based stats.
Identities = 203/968 (20%), Positives = 388/968 (40%), Gaps = 156/968 (16%)
Query: 2 KLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLG-DGFHQYVIFDIALRNIL- 59
++ +KT+ TY V F++ + I +YL ++W S + DGF+Q+ RN+L
Sbjct: 16 EITYKTFLTYSVLFVL---VTISIYL---LFWLRGYSFIWSHDGFNQHYPILKEFRNMLV 69
Query: 60 -----HGNGSLFYTFTSGLGLNFYALSSYY-LGSFLSPLVYFFDLTNMPDAVYLTTLLKF 113
+++ G+G + YY LG + LV F M A LL+
Sbjct: 70 DFLKHPTQVPELWSWQIGMGGDVVGSFGYYVLGDIFAYLVVLFPADQMELAYTTLILLRL 129
Query: 114 GLIGLSTYFSLNKLFQSIPNPLKLALSTSYALMSFT-VSQLEIKTWLDVFILIPLIITGL 172
+G++ + +L K F+ I + + S Y + VS ++ IL+PL+ +
Sbjct: 130 FCVGIA-FLALAKNFK-INHIAAVTGSLVYVFSGYLFVSATRHPFFITPMILLPLLCLCV 187
Query: 173 QILITKKKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFI--- 229
+ ++ KK + + + N+YF YM A+ + + + + +K + L I
Sbjct: 188 ERVLQKKSPVPLILVICWTLVSNFYFAYMLAIMVCIYTVIRYFTHYKKQGIPLLSTIGKL 247
Query: 230 -ITSVLAGMASLILILPTLFDLQTHGEKLTEVTK--FQTESSWYLDLFAKQFIGSFDTTK 286
+ ++ + + IL LP L E + + S+YL L K +I + ++
Sbjct: 248 AVYAITGFLMACILFLPNLIAFLGSSRANGEFANGLWFYDLSYYLSL-GKMYITT-ESAG 305
Query: 287 YGA---IPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLF---W 340
Y A I V +LPFI + + Y + F L+ + + F +
Sbjct: 306 YWANLGFAAIAVFVLPFI------------WQYRKKYPVVFISLVLGLGMMLFPFFGALF 353
Query: 341 QGMHTPNMFLHRYAWIFSTLLIYTAAEVL-----NRLKEIKIWNFLVSL--FLIVTGFLA 393
G+ +P+ W+F+ L + L + + NFL++L F++V+ +
Sbjct: 354 NGLSSPS-----NRWMFAVALPVSIGVSFLLTDYKTLTKKDMRNFLITLIIFIVVSWWGP 408
Query: 394 TIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSL--N 451
+ + +LLT F+ + L IKK LF LI + + V ++ N
Sbjct: 409 NFNIYQPILLVPLTLMLLTF-FVFFLQFINLNYIKKKAYNGLFYFLIIMLVCVNLAYMGN 467
Query: 452 ASSQMDGIAKEWGFASRSSYNRDIPAMESFSTDI--GNQFTRTEKLQTQTG-----NDSM 504
+G K G + R I + + + F RT G + ++
Sbjct: 468 YMFSKNGANKVQGQLNSGVVERKITELYGGADKKIDKSSFYRTSLSSGYNGFYDNSDANI 527
Query: 505 KFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNIS-DNP 563
+ N ++ F S+ N + + +L L L +N + ++ G Y + D+
Sbjct: 528 LLDVNTVNSFYSITNGAVADLASELNNSQFRMTLPLGQMDNRTIFTNILGTTYLFARDDQ 587
Query: 564 IDK--YGFKDIYQKD----------NLALYENQFSLPIAFAS------------------ 593
+ YGFK I + + +YE++ S+P+ + +
Sbjct: 588 AGRIPYGFKKIDSAEIERVDKPGISHTDVYESENSVPLMYMNYHTEDRESYEKLSPLEKE 647
Query: 594 -QFVYNDVKFNEHTLDNQASFLNQLANVDFDYFSPILYEK--TENTDDLISVTSSSNEDA 650
YN + N+ T ++ + + + ++F+ P + +K + T D I + SN +
Sbjct: 648 EALSYNAIIDNKDT--SKREYKSNIKELEFETSIPKVNDKAPAKLTKDKIEI---SNAEN 702
Query: 651 AIQYQIEVPE---NSQVYLSFTNLHFS--NDKQKKVDILVNSEKKT------FTTDNAFS 699
+IQ++++ PE N+++Y L F+ KQ+K E KT + +N
Sbjct: 703 SIQFKLKNPEETKNAELYFYIDGLDFTPYTFKQRKDIAFAKDEYKTKNMRYNYYRNNLTK 762
Query: 700 FFNLGYTKEKKTFN-----------------------------------INVSFPGNSQV 724
YT KT N ++++ G
Sbjct: 763 RIKEDYTLTAKTSNRVVSASQVDKSELSGYFKRDNMLLNGGFSEKARKQVSINLSGLGTY 822
Query: 725 SFESPTFYRLD-TQTLTEAIQKIKEQPVT-VSTSKNKVFATYDVQQDTSIFFTIPYDKGW 782
+++ Y + + T+ +Q++K+Q T + NKV A +QD + TIPY KGW
Sbjct: 823 DYDNIKIYAVPFDDSYTKRMQELKKQAATDLKFDTNKVSAKVSAKQDGVLVTTIPYTKGW 882
Query: 783 SAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFG----IY 838
DGK++ ++ TGF+ + KG+ TI +++ G + S ++LF +Y
Sbjct: 883 KVKVDGKEVSTEKVNTGFIGFSLDKGRHTIEMNYETPMLKAGMVASGLGVILFAGIIVVY 942
Query: 839 NHRQKSSK 846
+ R++ +K
Sbjct: 943 HLRKRRNK 950
>gi|153812393|ref|ZP_01965061.1| hypothetical protein RUMOBE_02792 [Ruminococcus obeum ATCC 29174]
gi|149831555|gb|EDM86642.1| hypothetical protein RUMOBE_02792 [Ruminococcus obeum ATCC 29174]
Length = 545
Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 128/596 (21%), Positives = 232/596 (38%), Gaps = 104/596 (17%)
Query: 265 TESSWYL-------DLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTLKSIKFHVK 317
T W++ D+F F + T G +F G L I I FF + K
Sbjct: 19 TSGGWFIGFHAGLKDIFKGCFFLTVPYTGQGL--TLFCGSLTLIALIGFFISRKQNLKAK 76
Query: 318 LIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLNRLKEIKI 377
L + F I L+ W G T + + R++++ S ++Y
Sbjct: 77 LWTLGYLLFFILCATFVPLENIWNGFRTVSSYYCRFSFVISFFILY-------------- 122
Query: 378 WNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFA 437
+A ++L S V+KK+ N+ A
Sbjct: 123 --------------IAAVFLSSF-------------------------VLKKYYLNNIVA 143
Query: 438 ILISLFIMVEMSLNA-SSQMDGIAKEWGFASRSSYNRDIPAMESFSTDI----GNQFTRT 492
+L +F E+ A + ++G + S ++YNR E D+ + F RT
Sbjct: 144 VLCMIFTCSELFYGAYQTFVNGY-----YVSATAYNRYATTQEQAVQDLHTLDDSLFYRT 198
Query: 493 EKLQTQTGN---------DSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYA 543
E+ + N + + + Y +S +SS N + + +K G+ S L + +
Sbjct: 199 EQTSSWRTNADHFQGNFNEGLAYGYMPLSSYSSTYNSNIMAFYNKCGY--SVYRLLITWC 256
Query: 544 NNSILADSLFGIQYNISDNPIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFN 603
+ +DSL GI+Y + D Y + +N +Y+N ++L + + + +
Sbjct: 257 EPILSSDSLLGIKYILGDFTQSGYEKVNDTGYNNKNIYKNPYALELGYKTSDDISSEIHA 316
Query: 604 EHTLDNQASFLNQLANVDFDYFSPILYEKTENTDDLISVTSSSNEDAAIQYQIEVPENSQ 663
++ + Q + L+++ + EKT+N D + + PE
Sbjct: 317 DNIFEYQNALLSRIVGHLVQCYKTCTAEKTKNND-------------GYSWTVTSPEQDS 363
Query: 664 VYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGNSQ 723
V + N ND + +D + + ++ +A+ F +G + T V G Q
Sbjct: 364 VLYGYCNYTSGNDLKLYID---GNLRTKYSIWSAYKTFQVG---DGNTPAHIVQLKGTLQ 417
Query: 724 VSFE-SPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNK-VFATYDVQQDTSIFFTIPYDKG 781
S E FY LD Q + +++I + VT ++K + Y Q D + TIPYD G
Sbjct: 418 RSREIDGVFYYLDMQEFRDVMREISQNQVTTFDLQDKYIKCEYTAQSDELLLLTIPYDDG 477
Query: 782 WSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFGI 837
W+AY +G+K+E + Q F + V G TI + + GF G I S ++++ +
Sbjct: 478 WTAYVNGEKVEAYKLQDIFTGIRVTSGINTIEMKYTLPGFKIGVIFSCLGVIVYSL 533
>gi|152977611|ref|YP_001377128.1| multidrug resistance protein B [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152026363|gb|ABS24133.1| multidrug resistance protein B [Bacillus cereus subsp. cytotoxis
NVH 391-98]
Length = 894
Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 177/894 (19%), Positives = 366/894 (40%), Gaps = 115/894 (12%)
Query: 6 KTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSL 65
KT++ IIP++++ + GD Q+ F L++ +G+
Sbjct: 8 KTFFHKSTFIIIPLLLLCAFIFHYFFLTSDQIFSGSGDALSQFGFFTFLLQHAFK-DGNF 66
Query: 66 FYTFTSGLGLNFYALSSYYLGS----FLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTY 121
F+++ GLG + + SYY + +++ L+ ++ + D ++ K L L Y
Sbjct: 67 FWSWNYGLGGDLFGEFSYYYSTAPFFWITLLLPKLNIEQIYDMKLYMSIFKSFLAMLFMY 126
Query: 122 FSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKF 181
SL ++ + A+ ++F L D + +PL++ G I ++K
Sbjct: 127 GSLRYHHKTTFSSFISAIIYG-GCITFIRHSLLWDFMADAIVFLPLVLWGFDRYIIERKK 185
Query: 182 LLYFTSLSILFIQNYYFGYMTALFLIFWYLCQ--ISWDFKTRKSSFLDFIITSVLAGMA- 238
L+ + +++ N+YF ++T++F+ + Q + KT +S +I + L G++
Sbjct: 186 GLFLFATALMLASNFYFAFITSIFIYIYAFFQYFTTQQNKTIQSFLTYYIRITFLYGLSL 245
Query: 239 --SLILILPTLFDLQTHGEKLTEVTKFQT----ESSWYLDLFAKQFIGSFDTTKYGAIPM 292
+ LP++ + + ++LT+ KF E ++Y +L F + A+P+
Sbjct: 246 GLVAVFFLPSV-NAVFNADRLTK--KFDIPLFFEETFYKNLLESIFFINNAEYYQLALPV 302
Query: 293 IFVGLL--------PFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMH 344
+ + L+ F+L + FT F + ++Y I +T+ + + +
Sbjct: 303 LILFLIIIGLFIRDKFVLNKVLFT-----FFMLILYMIPYTYSVFNGF------------ 345
Query: 345 TPNMFLHRYAWIFSTLLIYTAAEVLNRLKEIKIWNFLVSLF--LIVTGFLATIYLKSHYS 402
+ +R+ ++FS ++ T A +L+ + K N L+ L L+ TG Y+
Sbjct: 346 --SAMQYRWYYLFSFIIAQTVAYILDWMLLHKKENKLMYLISALLATGLFI-------YA 396
Query: 403 FLTDLNI-----------LLTLEFLVVYSLLLLAVIKKFIS---VNLFAILISLFIMVEM 448
F+ +NI L+++ + + ++ L + K V L ++ +FI
Sbjct: 397 FMRKVNINDQPLDEVDHMLISVIVISILTICLWRYLSKIFLQFLVILNVLINVIFINYMY 456
Query: 449 SLNASSQMDG---IAKEWGFASRSSYNRDIPAMESFSTDIGNQFTRTEKLQTQTGNDSMK 505
S N S+ G + KE AS +I A+ + D F R N M
Sbjct: 457 SENVLSKPFGQRNVTKESLHASGYDNQDEIAAIR-YIQDHDKDFYRIIN-PGSLRNTPML 514
Query: 506 FNYNGISQFSSVRNRSASSTLDK-----LGFKSSGTNLNLRYANNSILADSLFGIQYNIS 560
Y+G S + S+ N + GF + L +N +L +++ G++Y I
Sbjct: 515 QEYHGASAYHSLINYYVHDFMKNKYNVFQGFDTPSMFFQL---DNRLLLENMLGVKYYIL 571
Query: 561 DNPIDK----YGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEHTLDNQASFL-- 614
D YG+K + Q +Y+N+++LP+ + + +D +F++ + L
Sbjct: 572 SADTDAANIPYGYKQLKQVGPYNIYKNEYALPLGYVYESGIDDKEFSKLNFAERDQLLLD 631
Query: 615 ----NQLANVDFDYFSP--------------ILYEKTENTDDLISVTSSSNEDAAIQYQI 656
+ + + +F I +E EN +++++V +ED I I
Sbjct: 632 AVVVDNIKDFSLKHFDTKRLDVKPVPIKTEQIQFENIENNNNMLTV----HEDGRIIVPI 687
Query: 657 EVPE---NSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFN 713
+ P + V L N + D+ + + +NLG
Sbjct: 688 DPPNVVGDLLVELKIKNKGSFHAIVNGKDMSKGDDAGAYAYPLERFVYNLGKNNHPNELT 747
Query: 714 INVS--FPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPV-TVSTSKNKVFATYDVQQDT 770
I+++ PG + + ++ + + E +K+ E + +S N + + +D
Sbjct: 748 ISITDKIPGPGEYELQDLQVNIVNYENIQEKTKKLTENRLQNISYKNNYLKGQVNSSKDG 807
Query: 771 SIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITG 824
++ ++PY KGW+ DGK+ E +A + F+ V + KG I + ++ F G
Sbjct: 808 LLYLSVPYSKGWTIKVDGKETEFTKANSAFIGVPIQKGSHIIEMKYVTPYFKLG 861
>gi|16803119|ref|NP_464604.1| hypothetical protein lmo1079 [Listeria monocytogenes EGD-e]
gi|47094937|ref|ZP_00232550.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
gi|153190485|ref|ZP_01937874.1| hypothetical protein LMPG_01036 [Listeria monocytogenes J2818]
gi|16410481|emb|CAC99157.1| lmo1079 [Listeria monocytogenes]
gi|47016555|gb|EAL07475.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
gi|127765867|gb|EBA26211.1| hypothetical protein LMPG_01036 [Listeria monocytogenes J2818]
Length = 952
Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 204/968 (21%), Positives = 386/968 (39%), Gaps = 156/968 (16%)
Query: 2 KLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLG-DGFHQYVIFDIALRNIL- 59
++ +KT+ TY V F++ + I +YL ++W S + DGF+Q+ RN+L
Sbjct: 16 EITYKTFLTYSVLFVL---VTISIYL---LFWLRGYSFIWSHDGFNQHYPILKEFRNMLV 69
Query: 60 -----HGNGSLFYTFTSGLGLNFYALSSYY-LGSFLSPLVYFFDLTNMPDAVYLTTLLKF 113
+++ G+G + YY LG + LV F M A LL+
Sbjct: 70 DFLKHPTQVPELWSWQIGMGGDVVGSFGYYVLGDIFAYLVVLFPADQMELAYTTLILLRL 129
Query: 114 GLIGLSTYFSLNKLFQSIPNPLKLALSTSYALMSFT-VSQLEIKTWLDVFILIPLIITGL 172
+G++ + +L K F+ I + + S Y + VS ++ IL+PL+ +
Sbjct: 130 FCVGIA-FLALAKNFK-INHIAAVTGSLVYVFSGYLFVSATRHPFFITPMILLPLLCLCV 187
Query: 173 QILITKKKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFI--- 229
+ ++ KK + + + N+YF YM A+ + + + + +K + L I
Sbjct: 188 ERVLQKKSPVPLILVICWTLVSNFYFAYMLAIMVCIYTVIRYFTHYKKQGIPLLSTIGKL 247
Query: 230 -ITSVLAGMASLILILPTLFDLQTHGEKLTEVTK--FQTESSWYLDLFAKQFIGSFDTTK 286
+ ++ + + IL LP L E + + S+YL L K +I + ++
Sbjct: 248 AVYAITGFLMACILFLPNLIAFLGSSRANGEFANGLWFYDLSYYLSL-GKMYITT-ESAG 305
Query: 287 YGA---IPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLF---W 340
Y A I V +LPFI + + Y + F L+ + + F +
Sbjct: 306 YWANLGFAAIAVFVLPFI------------WQYRKKYPVVFISLVLGLGMMLFPFFGALF 353
Query: 341 QGMHTPNMFLHRYAWIFSTLLIYTAAEVL-----NRLKEIKIWNFLVSL--FLIVTGFLA 393
G+ +P+ W+F+ L + L + + NFL++L F++V+ +
Sbjct: 354 NGLSSPS-----NRWMFAVALPVSIGVSFLLTDYKTLTKKDMRNFLITLIIFIVVSWWGP 408
Query: 394 TIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSL--N 451
+ + +LLT F+ + L IKK LF LI + + V ++ N
Sbjct: 409 NFNIYQPILLVPLTLMLLTF-FVFFLQFINLNYIKKKAYNGLFYFLIIMLVCVNLAYMGN 467
Query: 452 ASSQMDGIAKEWGFASRSSYNRDIPAMESFSTDI--GNQFTRTEKLQTQTG-----NDSM 504
+G K G + R I + + + F RT G + ++
Sbjct: 468 YMFSKNGANKVQGQLNSGVVERKITELYGGADKKIDKSSFYRTSLSSGYNGFYDNSDANI 527
Query: 505 KFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNIS-DNP 563
+ N ++ F S+ N + + +L L L +N + ++ G Y + D+
Sbjct: 528 LLDVNTVNSFYSITNGAVADLASELNNSQFRMTLPLGQMDNRTIFTNILGTTYLFARDDQ 587
Query: 564 IDK--YGFKDIYQKD----------NLALYENQFSLPIAFAS------------------ 593
+ YGFK I + + +YE++ S+P+ + +
Sbjct: 588 AGRIPYGFKKIDSAEIERVDKPGISHTDVYESENSVPLMYMNYHTEDRESYEKLSPLEKE 647
Query: 594 -QFVYNDVKFNEHTLDNQASFLNQLANVDFDYFSPILYEK--TENTDDLISVTSSSNEDA 650
YN + N+ T ++ + + + ++F+ P + K + T D I V SN +
Sbjct: 648 EALSYNAIIDNKDT--SKREYKSNIKELEFETSIPKVNGKAPAKLTKDKIEV---SNAEN 702
Query: 651 AIQYQIEVPE---NSQVYLSFTNLHFS--NDKQKKVDILVNSEKKT------FTTDNAFS 699
+IQ++++ PE N+++Y L F+ KQ+K E KT + +N
Sbjct: 703 SIQFKLKNPEETKNAELYFYIDGLDFTPYTFKQRKDIAFAKDEYKTKNMRYNYYRNNLTK 762
Query: 700 FFNLGYTKEKKTFN-----------------------------------INVSFPGNSQV 724
YT KT N ++++ G
Sbjct: 763 RIKEDYTLTAKTSNRVVSASQVDKSELSGYFKRDNMLLNGGFSEKARKQVSINLSGLGTY 822
Query: 725 SFESPTFYRLD-TQTLTEAIQKIKEQPVT-VSTSKNKVFATYDVQQDTSIFFTIPYDKGW 782
+++ Y + + T+ +Q++K+Q T + NKV A +QD + TIPY KGW
Sbjct: 823 DYDNIKIYAVPFDDSYTKRMQELKKQAATDLKFDTNKVSAKVSAKQDGVLVTTIPYTKGW 882
Query: 783 SAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFG----IY 838
DGK++ ++ TGF+ + KG TI +++ G + S ++LF +Y
Sbjct: 883 KVKVDGKEVSTEKVNTGFIGFSLDKGLHTIEMNYETPMLKAGMVASGLGVILFAGIIVVY 942
Query: 839 NHRQKSSK 846
+ R++ +K
Sbjct: 943 HLRKRKNK 950
>gi|153195876|ref|ZP_01940284.1| hypothetical protein LMRG_00541 [Listeria monocytogenes 10403S]
gi|127634158|gb|EBA23544.1| hypothetical protein LMRG_00541 [Listeria monocytogenes 10403S]
Length = 952
Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 204/968 (21%), Positives = 387/968 (39%), Gaps = 156/968 (16%)
Query: 2 KLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLG-DGFHQYVIFDIALRNIL- 59
++ +KT+ TY V F++ + I +YL ++W S + DGF+Q+ RN+L
Sbjct: 16 EITYKTFLTYSVLFVL---VTISIYL---LFWLRGYSFIWSHDGFNQHYPILKEFRNMLV 69
Query: 60 -----HGNGSLFYTFTSGLGLNFYALSSYY-LGSFLSPLVYFFDLTNMPDAVYLTTLLKF 113
+++ G+G + YY LG + LV F M A LL+
Sbjct: 70 DFLKHPTQVPELWSWQIGMGGDVVGSFGYYVLGDIFAYLVVLFPADQMELAYTTLILLRL 129
Query: 114 GLIGLSTYFSLNKLFQSIPNPLKLALSTSYALMSFT-VSQLEIKTWLDVFILIPLIITGL 172
+G++ + +L K F+ I + + S Y + VS ++ IL+PL+ +
Sbjct: 130 FCVGIA-FLALAKNFK-INHIAAVTGSLVYVFSGYLFVSATRHPFFITPMILLPLLCLCV 187
Query: 173 QILITKKKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFI--- 229
+ ++ KK + + + N+YF YM A+ + + + + +K + L I
Sbjct: 188 ERVLQKKSPVPLILVICWTLVSNFYFAYMLAIMVCIYTVIRYFTHYKKQGIPLLSTIGKL 247
Query: 230 -ITSVLAGMASLILILPTLFDLQTHGEKLTEVTK--FQTESSWYLDLFAKQFIGSFDTTK 286
+ ++ + + IL LP L E + + S+YL L K +I + ++
Sbjct: 248 AVYAITGFLMACILFLPNLIAFLGSSRANGEFANGLWFYDLSYYLSL-GKMYITT-ESAG 305
Query: 287 YGA---IPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLF---W 340
Y A I V +LPFI + + Y + F L+ + + F +
Sbjct: 306 YWANLGFAAIAVFVLPFI------------WQYRKKYPVVFISLVLGLGMMLFPFFGALF 353
Query: 341 QGMHTPNMFLHRYAWIFSTLLIYTAAEVL-----NRLKEIKIWNFLVSL--FLIVTGFLA 393
G+ +P+ W+F+ L + L + + NFL++L F++V+ +
Sbjct: 354 NGLSSPS-----NRWMFAVALPVSIGVSFLLTDYKTLTKKDMRNFLITLIIFIVVSWWGP 408
Query: 394 TIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSL--N 451
+ + + +LLT F+ + L IKK LF LI + + V ++ N
Sbjct: 409 NFNIYQPILLVPLILMLLTF-FVFFLQFINLNYIKKKAYNGLFYFLIIMLVCVNLAYMGN 467
Query: 452 ASSQMDGIAKEWGFASRSSYNRDIPAMESFSTDI--GNQFTRTEKLQTQTG-----NDSM 504
+G K G + R I + + + F RT G + ++
Sbjct: 468 YMFSKNGANKVQGQLNSGVVERKITELYGGADKKIDKSSFYRTSLSSGYNGFYDNSDANI 527
Query: 505 KFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNIS-DNP 563
+ N ++ F S+ N + + +L L L +N + ++ G Y + D+
Sbjct: 528 LLDVNTVNSFYSITNGAVADLASELNNSQFRMTLPLGQMDNRTIFTNILGTTYLFARDDQ 587
Query: 564 IDK--YGFKDIYQKD----------NLALYENQFSLPIAFAS------------------ 593
+ YGFK I + + +YE++ S+P+ + +
Sbjct: 588 AGRIPYGFKKIDSAEIERVDKPGISHTDVYESENSVPLMYMNYHTEDRESYEKLSPLEKE 647
Query: 594 -QFVYNDVKFNEHTLDNQASFLNQLANVDFDYFSPILYEK--TENTDDLISVTSSSNEDA 650
YN + N+ T ++ + + + ++F+ P + K + T D I V SN +
Sbjct: 648 EALSYNAIIDNKDT--SKREYKSNIKELEFETSIPKVNGKAPAKLTKDKIEV---SNAEN 702
Query: 651 AIQYQIEVPE---NSQVYLSFTNLHFS--NDKQKKVDILVNSEKKT------FTTDNAFS 699
+IQ++++ PE N+++Y L F+ KQ+K E KT + +N
Sbjct: 703 SIQFKLKNPEETKNAELYFYIDGLDFTPYTFKQRKDIAFAKDEYKTKNMRYNYYRNNLTK 762
Query: 700 FFNLGYTKEKKTFN-----------------------------------INVSFPGNSQV 724
YT KT N ++++ G
Sbjct: 763 RIKEDYTLTAKTSNRVVSASQVDKSELSGYFKRDNMLLNGGFSEKARKQVSINLSGLGTY 822
Query: 725 SFESPTFYRLD-TQTLTEAIQKIKEQPVT-VSTSKNKVFATYDVQQDTSIFFTIPYDKGW 782
+++ Y + + T+ +Q++K+Q T + NKV A +QD + TIPY KGW
Sbjct: 823 DYDNIKIYAVPFDDSYTKRMQELKKQAATDLKFDTNKVSAKVSAKQDGVLVTTIPYTKGW 882
Query: 783 SAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFG----IY 838
DGK++ ++ TGF+ + KG TI +++ G + S ++LF +Y
Sbjct: 883 KVKVDGKEVSTEKVNTGFIGFSLDKGLHTIEMNYETPMLKAGMVASGLGVILFAGIIVVY 942
Query: 839 NHRQKSSK 846
+ R++ +K
Sbjct: 943 HLRKRKNK 950
>gi|153174145|ref|ZP_01929707.1| hypothetical protein LMIG_02292 [Listeria monocytogenes FSL N3-165]
gi|133730514|gb|EBA32212.1| hypothetical protein LMIG_02292 [Listeria monocytogenes FSL N3-165]
Length = 952
Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 204/968 (21%), Positives = 386/968 (39%), Gaps = 156/968 (16%)
Query: 2 KLFFKTYWTYFVSFIIPIIIMIGVYLSQGIYWNSDTSPLLG-DGFHQYVIFDIALRNIL- 59
++ +KT+ TY V F++ + I +YL ++W S + DGF+Q+ RN+L
Sbjct: 16 EITYKTFLTYSVLFVL---VTISIYL---LFWLRGYSFIWSHDGFNQHYPILKEFRNMLV 69
Query: 60 -----HGNGSLFYTFTSGLGLNFYALSSYY-LGSFLSPLVYFFDLTNMPDAVYLTTLLKF 113
+++ G+G + YY LG + LV F M A LL+
Sbjct: 70 DFLKHPTQVPELWSWQIGMGGDVVGSFGYYVLGDIFAYLVVLFPADQMELAYTTLILLRL 129
Query: 114 GLIGLSTYFSLNKLFQSIPNPLKLALSTSYALMSFT-VSQLEIKTWLDVFILIPLIITGL 172
+G++ + +L K F+ I + + S Y + VS ++ IL+PL+ +
Sbjct: 130 FCVGIA-FLALAKNFK-INHIAAVTGSLVYVFSGYLFVSATRHPFFITPMILLPLLCLCV 187
Query: 173 QILITKKKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKSSFLDFI--- 229
+ ++ KK + + + N+YF YM A+ + + + + +K + L I
Sbjct: 188 ERVLQKKSPVPLILVICWTLVSNFYFAYMLAIMVCIYTVIRYFTHYKKQGIPLLSTIGKL 247
Query: 230 -ITSVLAGMASLILILPTLFDLQTHGEKLTEVTK--FQTESSWYLDLFAKQFIGSFDTTK 286
+ ++ + + IL LP L E + + S+YL L K +I + ++
Sbjct: 248 AVYAITGFLMACILFLPNLIAFLGSSRANGEFANGLWFYDLSYYLSL-GKMYITT-ESAG 305
Query: 287 YGA---IPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLF---W 340
Y A I V +LPFI + + Y + F L+ + + F +
Sbjct: 306 YWANLGFAAIAVFVLPFI------------WQYRKKYPVVFISLVLGLGMMLFPFFGALF 353
Query: 341 QGMHTPNMFLHRYAWIFSTLLIYTAAEVL-----NRLKEIKIWNFLVSL--FLIVTGFLA 393
G+ +P+ W+F+ L + L + + NFL++L F++V+ +
Sbjct: 354 NGLSSPS-----NRWMFAVALPVSIGVSFLLTDYKTLTKKDMRNFLITLIIFIVVSWWGP 408
Query: 394 TIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSL--N 451
+ + +LLT F+ + L IKK LF LI + + V ++ N
Sbjct: 409 NFNIYQPILLVPLTLMLLTF-FVFFLQFINLNYIKKKAYNGLFYFLIIMLVCVNLAYMGN 467
Query: 452 ASSQMDGIAKEWGFASRSSYNRDIPAMESFSTDI--GNQFTRTEKLQTQTG-----NDSM 504
+G K G + R I + + + F RT G + ++
Sbjct: 468 YMFSKNGANKVQGQLNSGVVERKITELYGGADKKIDKSSFYRTSLSSGYNGFYDNSDANI 527
Query: 505 KFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNIS-DNP 563
+ N ++ F S+ N + + +L L L +N + ++ G Y + D+
Sbjct: 528 LLDVNTVNSFYSITNGAVADLASELNNSQFRMTLPLGQMDNRTIFTNILGTTYLFARDDQ 587
Query: 564 IDK--YGFKDIYQKD----------NLALYENQFSLPIAFAS------------------ 593
+ YGFK I + + +YE++ S+P+ + +
Sbjct: 588 AGRIPYGFKKIDSAEMERVDKPGISHTDVYESENSVPLMYMNYHTEDRESYEKLSPLEKE 647
Query: 594 -QFVYNDVKFNEHTLDNQASFLNQLANVDFDYFSPILYEK--TENTDDLISVTSSSNEDA 650
YN + N+ T ++ + + + ++F+ P + K + T D I V SN +
Sbjct: 648 EALSYNAIIDNKDT--SKREYKSNIKELEFETSIPKVNGKAPAKLTKDKIEV---SNAEN 702
Query: 651 AIQYQIEVPE---NSQVYLSFTNLHFS--NDKQKKVDILVNSEKKT------FTTDNAFS 699
+IQ++++ PE N+++Y L F+ KQ+K E KT + +N
Sbjct: 703 SIQFKLKNPEETKNAELYFYIDGLDFTPYTFKQRKDIAFAKDEYKTKNMRYNYYRNNLTK 762
Query: 700 FFNLGYTKEKKTFN-----------------------------------INVSFPGNSQV 724
YT KT N ++++ G
Sbjct: 763 RIKEDYTLTAKTSNRVVSASQVDKSELSGYFKRDNMLLNGGFSEKARKQVSINLSGLGTY 822
Query: 725 SFESPTFYRLD-TQTLTEAIQKIKEQPVT-VSTSKNKVFATYDVQQDTSIFFTIPYDKGW 782
+++ Y + + T+ +Q++K+Q T + NKV A +QD + TIPY KGW
Sbjct: 823 DYDNIKIYAVPFDDSYTKRMQELKKQAATDLKFDTNKVSAKVSAKQDGVLVTTIPYTKGW 882
Query: 783 SAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSLLLFG----IY 838
DGK++ ++ TGF+ + KG TI +++ G + S ++LF +Y
Sbjct: 883 KVKVDGKEVSTEKVNTGFIGFSLDKGLHTIEMNYETPMLKAGMVASGLGVILFAGIIVVY 942
Query: 839 NHRQKSSK 846
+ R++ +K
Sbjct: 943 HLRKRKNK 950
>gi|70726673|ref|YP_253587.1| hypothetical protein SH1672 [Staphylococcus haemolyticus JCSC1435]
gi|68447397|dbj|BAE04981.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 869
Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 192/913 (21%), Positives = 346/913 (37%), Gaps = 118/913 (12%)
Query: 2 KLFFKTYWTYFVSFIIPIIIMIGVY-------LSQGIYWNSDTSPLLGDGFHQYVIFDIA 54
K++ K WT+ FII I+ + +Y + G+ ++ GDGF Q + F +
Sbjct: 4 KIWSKPLWTFGFIFIIANIVTLTIYYPFIRDYIKDGVVFSGS-----GDGFRQMMPFQLY 58
Query: 55 L-RNILHGNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYF------------------ 95
L + G FY + GLG ++ +YY LSP+++
Sbjct: 59 LYEHFTQLKG--FYDHSFGLGGDYVKGLAYYYS--LSPIMWVNFIIVWIGEHIFHWQPQN 114
Query: 96 --FDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQL 153
F TN Y+ T++ F I YF KL + PL +A A
Sbjct: 115 IRFWPTNQLIVAYVRTIITF--ICAFYYFRYLKLSST---PLLIATILYGASTVVLYYNF 169
Query: 154 EIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQ 213
+ D+ I++PL + G++ ++K L+ +++I N+YF Y A+ L +++ +
Sbjct: 170 TWSFYGDLLIILPLSLWGMERFFQRRKIGLFIFAVAITLFSNFYFTYYQAIVLGIYFILR 229
Query: 214 ISWDFKTRKSSFLDFIITSVLAGMASLILILPTLFDLQTHGEKLTEVTKFQTESSWYLDL 273
+ + ++ S ++ M +L+ + + T V+ F
Sbjct: 230 VVFQYRHDIVSRWQKCYLLIIGAMFALLSSILGFY---------TGVSSFLNNDRQQNSD 280
Query: 274 FAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYI 333
F Y F + I + T K K + I+AI FL+
Sbjct: 281 FNISLFTDLTKNNYYIFSNGFYVTISLIALVALLTPKLYKHYYYKIFAIITWFLLIGSLS 340
Query: 334 EVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTA--AEVLNRLKEIKIWNFLVSLFLIVTGF 391
+ D + G P + W++ +L + A ++ L E+ + F LF V+ F
Sbjct: 341 QYFDSAFNGFSLP-----QRRWVYFLVLSTSGLIALYIHHLSELTMKQF---LFAAVSVF 392
Query: 392 LATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAI-LISLFIMVEMSL 450
+A + Y + + + +++ L + K + + + LI LF ++ +
Sbjct: 393 IAGL---CRYIIADNFVDWMVIALIIIVVLGIFIYRKSLLKQPIIMLSLIVLFFGQQIIM 449
Query: 451 NASSQ---MDGIAKEWGFASRSSYNRDIPA--MESFSTDIGNQFTRTEKLQTQTGNDSMK 505
S+ +D + S SY D A + S + F R + + N
Sbjct: 450 THDSRQRTIDPYSTTINTLSDPSYYNDTTAKKINSIKEHHDDPFHRIDYMSAYALNSPFL 509
Query: 506 FNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLN--LRYANNSILADSLFGIQYNISDNP 563
++YNGIS +SS+ + DKL + + N R+ N +L+ +Q + +P
Sbjct: 510 YHYNGISLYSSIFDGGILKYYDKLMQINMPVDKNSTYRFLGNRANLTALWNVQDRLR-HP 568
Query: 564 IDK---YGFKD----IYQKDNLALYENQFSLPIAFASQFVYNDVKFNEHTLDNQASFL-- 614
D+ YGF+ + K+ L +N P A + +YN + LD + + L
Sbjct: 569 EDQNMTYGFEKKDMILNGKNTLIHSKNMIDYPSAHVTNHIYNSDDL-KSPLDREQAMLKG 627
Query: 615 ------NQLANVDFDYFSPILYEKTENTDDLI--------------SVTSSSNEDAAIQY 654
++ AN F +L E +T D VT E A QY
Sbjct: 628 IILNDNSEKANTSFKPNKNLLTESKMSTKDATWKNQNHLKVHKDNGGVTLKLPESVANQY 687
Query: 655 QIEVPENSQVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNI 714
+ +Y+ S DK V + S+ + + + K + +
Sbjct: 688 K-------DMYVEMDVELLSPDKAHSVSVNEYSQNRNELSYKYRRLVTPVTMRVKASDKL 740
Query: 715 NVSFP-GNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIF 773
N+ GN ++S + Y D TL +A +++ PV V +N +
Sbjct: 741 NIHLSKGNYRLSVKG--IYGEDYSTLKKASKEL--TPVKVKDMRNGYVVKKPKNATGYVI 796
Query: 774 FTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGFITGAICSFTSL- 832
Y KG A DGK++ + QA + V KG I L++ P F AI SF +
Sbjct: 797 LPTVYAKGMHAQVDGKEVPVHQANGIMTAIPVNKGDKVIKLTYTPPQFYLLAIMSFIGVI 856
Query: 833 --LLFGIYNHRQK 843
+LF ++ +++
Sbjct: 857 GSILFSLWVKKKR 869
>gi|56962679|ref|YP_174405.1| hypothetical protein ABC0905 [Bacillus clausii KSM-K16]
gi|56908917|dbj|BAD63444.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 863
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 187/866 (21%), Positives = 344/866 (39%), Gaps = 129/866 (14%)
Query: 43 DGFHQYVIFDIALRNILHGNGSLFYTFTSGLGLNFYALSSYYLGS----FLSPLVYF--- 95
DG Q + F L + L+ GS FY+ GLG ++ +YY + FL+ LV +
Sbjct: 41 DGTAQMLPFKQFLYS-LYSEGSFFYSLQFGLGGGIFSQLAYYFATSTVFFLTFLVVYSGE 99
Query: 96 -FDLTNMPDAVYL-----TTLLKFGLIGLSTYFSLNKLFQSIPNPLKLALSTSY--ALMS 147
L PD V + F L + SL + +I + Y ++M
Sbjct: 100 ILGLFADPDTVLFWGQAAVFVNAFRLAAVVFITSLLFCYMNIKAKYAFIGAVLYGGSVMY 159
Query: 148 FTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSILFIQNYYFGYMTALFLI 207
F + + + D ++ +PL++ G++ +I ++K ++++ + N+YF Y+ LF+
Sbjct: 160 FRHAAF-WEFFADAYLWLPLLVLGVEKIIREQKPWWLIAAIALSLVNNFYFAYINFLFIG 218
Query: 208 FWYLCQISWDFKTRKSSF---LDFIITSVLAG-MASLILILPTLFD-LQTHGEKLTEVTK 262
+ L + + +SS L I SV G + I +P ++ + T+ +
Sbjct: 219 LYALLRFFFPLADHESSIKQQLRLYIPSVFIGFLIGAIAFIPAVYGYVNNFRPAFTDPIQ 278
Query: 263 FQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTLKSIKFHVKLIYAI 322
+ W+ ++F T++ +P IF+ L + K +F +A
Sbjct: 279 WM---DWHDNVFY--------TSRLLILPAIFIFCL---FARSLYKQKPFRF-----FAF 319
Query: 323 FFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLNRLKEIKIWNFLV 382
+A Y ++ + G P +R+ ++ S LL A L LK + +F +
Sbjct: 320 MALLFVAFHYSPMIGSVFNGFSAPQ---YRFQYMGSFLLAAAVAFALPSLKSLAKRDFWI 376
Query: 383 SLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILISL 442
+ L F + L + S L L V +L+LL + K V + +L+SL
Sbjct: 377 AFCLTGFAFALSYVLGYNTSSLFQSGQAYLLIISAVLTLVLLLFVHKHPKVWMPVLLVSL 436
Query: 443 FIMVEMSLNASSQMDGIAKEWGFASRS-----SYNRDIPAMESFSTDIGNQ--FTRTEKL 495
++ ++ L Q + + + + S S+ D A T ++ +R E +
Sbjct: 437 AVL-QLGLANIYQKERLYENGNLSQTSAAFLQSHEYDHDAQRELFTQTVDERPLSRVEWV 495
Query: 496 QTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNL------RYANNSILA 549
N + ++ G S +SSV N+ L F +++ RY+ A
Sbjct: 496 ADFRNNTPLVQDFYGTSAYSSVLNKHL------LFFYYHDLQIDMNRESVSRYSGFGDRA 549
Query: 550 D--SLFGIQYNISDN----PIDKYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFN 603
+ SLF ++Y + D PI YGF ++ + ALYEN+ LP A S Y++ + +
Sbjct: 550 NLHSLFQVKYKLVDQQKETPI-PYGFSEVANNERYALYENENVLPFARVSSSTYSEDQLS 608
Query: 604 E-HTLDNQASFLNQLANVDFDYFSPILYEKTENTDDLISVTSSSNEDAAIQYQIEVPENS 662
LD + + L I+ E T + I + DA I+ EN
Sbjct: 609 SLSVLDREHAMLEG-----------IIVEPGLETGEFIPQAQNRINDAEIEAVGGTYENG 657
Query: 663 QVYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFFNLGYTKEKKTFNINVSFPGNS 722
+ ++ ++ +DI + E+ D+ SF+ ++ F + V+ S
Sbjct: 658 LLTVT--------EEIGGLDIYI-GERDESEIDDYLSFYLRNNSETAPLFQLTVNEFKTS 708
Query: 723 QVSFESPTFYRLDTQTLT----------------------------------EAIQKIKE 748
+ S ES YR D +T EA+ +
Sbjct: 709 RKSRES--IYRTDVNHITIRVAANDVLSLRVPEGSYTLNELALYTETYSHLDEAVATSAD 766
Query: 749 QPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKG 808
PV +S+ + V D +++ + +PY+KGW A +G+K ++ + F+ V + G
Sbjct: 767 IPVQLSSREISVDYNND-EENNVLAIPVPYEKGWEATVNGEKADLLKVNYAFLGVPLQAG 825
Query: 809 KGTITLSFIPNGFITGAICSFTSLLL 834
+ I S+ P F + T LLL
Sbjct: 826 ENHIVFSYWPPFFRLSTFLTATGLLL 851
>gi|153812394|ref|ZP_01965062.1| hypothetical protein RUMOBE_02793 [Ruminococcus obeum ATCC 29174]
gi|149831556|gb|EDM86643.1| hypothetical protein RUMOBE_02793 [Ruminococcus obeum ATCC 29174]
Length = 212
Score = 73.2 bits (178), Expect = 8e-11, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 2/167 (1%)
Query: 14 SFIIPIIIMIGVYLSQGIYWNSDTSPLLGDGFHQYVIFDIALRNILHGNGSLFYTFTSGL 73
+F + +++I VY IY D + D QY+ F +LHG S+ Y+ + L
Sbjct: 13 AFTLTSVLLILVYYIGAIYPFGDHALFKWDMELQYIDFFHWWHRVLHGQASMSYSLSKSL 72
Query: 74 GLNFYALSSYYLGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSIPN 133
G N L++YYL S + L+YF D N+P V + T+LK L+ L+ F +
Sbjct: 73 GDNAIGLTAYYLSSPFNLLLYFTD--NIPLFVSIATVLKLASASLTVSVFLSYRFCDMKY 130
Query: 134 PLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKK 180
L LS SY LM + + Q WLD I +P+++ G+ L+++++
Sbjct: 131 IWNLLLSVSYGLMGYNLCQASNIMWLDGVIWLPILMLGIWKLLSERR 177
>gi|153811222|ref|ZP_01963890.1| hypothetical protein RUMOBE_01614 [Ruminococcus obeum ATCC 29174]
gi|149832720|gb|EDM87804.1| hypothetical protein RUMOBE_01614 [Ruminococcus obeum ATCC 29174]
Length = 899
Score = 66.6 bits (161), Expect = 7e-09, Method: Composition-based stats.
Identities = 181/852 (21%), Positives = 319/852 (37%), Gaps = 120/852 (14%)
Query: 45 FHQYVIFDIALRNILHGNGSLFYTFTSGLGLNFYALSSYYLGSFLSP---LVYFFDLTNM 101
+ QY +F R+ G Y +GLG++ +SSYY ++L P L+ +
Sbjct: 53 YAQYGLFSSLFRS-----GESGYVLQAGLGMD---VSSYY-PAYLIPYNLLILLAPQRLL 103
Query: 102 PDAVYLTTLLKFGLIGLSTYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDV 161
P AV + LK I L Y KL Q + AL+ +++ + + + +
Sbjct: 104 PWAVLASAYLKMITISLVGYLFYRKLMQDGIGTMAAALAWTFS--GYVILWGQHYGFCTC 161
Query: 162 FILIPLIITGLQILITKK---KFLLYFTSLSILFIQNYYFGYMTALFLIFW-YLCQISWD 217
L + + LQ + + K ++++L I +YYF YM A F +F+ ++ I
Sbjct: 162 MALFTVFMYFLQCYLNGEQRWKSAGLVITVTMLLISSYYFLYMIAFFAVFYVFIYSIMQR 221
Query: 218 FKTRKS-----SFLDFIITSVLAGMASLILILPTLFDLQTHG-------EKLTEVTKFQT 265
+ +++ I VL G +L+ I T + G L K +T
Sbjct: 222 YSLKRTVGKVAGLGGMGILGVLIGGVALVPIADTFLESARAGVLAAKGTSHLLSPYKGKT 281
Query: 266 ESSWYLDLFAKQFIG-SFDTTKYGAI--PMIFVGLLPFILTILFFTLKSIKFHVKLIYAI 322
+ F+ +G D T Y MI + + + +F +K L+ +
Sbjct: 282 LGTIVARFFSNHMLGIDKDYTGYLNYYEGMILAVSILTVFAVSYFIVKKSTRVKALVLTV 341
Query: 323 FFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAA------EVLNRLKEIK 376
F FL + +F + H Y W F + EV
Sbjct: 342 FLVFLTIMPLTSRILVFTK---------HSYRWTFMICFVEALVIGCFLQEVFREKNRKT 392
Query: 377 IWNFLVSLFLIVTGFLATIYLKSHYSFLTDLNILL-TLEFLVVYSLLLLAV---IKK--- 429
+ + +I G LA +Y S + D + + FL VY L+L AV +KK
Sbjct: 393 VLTGSILAIVICGGLLAWMY--SFKNIKPDHKVTAGVIGFLAVY-LILFAVGTSVKKMYR 449
Query: 430 -FISVNLFAILISLFIMVEMSL--NASSQMDGIAKEWGFASRSSYNRDIPAMESFSTDIG 486
F + L ++ LF++ SL S + +A E+ YN + +
Sbjct: 450 IFPAAVLLVLICELFVLDYPSLWYRESPTRNQVATEY-------YNDGTKEAVAMLKEQD 502
Query: 487 NQFTRTEKLQTQTG-NDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLNLRYANN 545
+ R EK T ND M YNG+S + S S + G ++ N + + +
Sbjct: 503 DSVYRIEKSYTSASENDGMSQGYNGLSVYMSTNPASLVAYHKMYGPETLSGNF-VDFNMD 561
Query: 546 SILADSLFGIQYNISDNPID--KYGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFN 603
+ SL G +Y I+ + + + + +++ENQ++LP + D ++N
Sbjct: 562 DYIRSSLLGTKYLITGTGYHAPQKIYTSVGEAGGRSVFENQYALPFGY-----LYDKEWN 616
Query: 604 EHTLDNQASFLNQLANVDFDYFSPILYEKTENTDDLISVTSSSNEDAAIQYQIEVPENSQ 663
+ + + LA++ Y++ + DL T S D A E
Sbjct: 617 QEEVKEMSGLDKTLASLSGFYYTDAEETSSYQKADLPEQTDLSLLDYADTATDCTMEKGS 676
Query: 664 VYLSFTNL--------------HFSNDKQKKVDILVNSEKKTFTT-------DNAFS--- 699
++ +NL NDK + + V++ +T D FS
Sbjct: 677 EGITVSNLGADPNVVFPGVASCFADNDKLYGLSLTVDAPDETEMAVYYQTEGDEGFSAEK 736
Query: 700 FFNLGYTKEKKTFN-----------INVSFPGNSQVSFESPTFYRLDTQTLTE----AIQ 744
+ T++ +T+ ++VS P S V + L + +TE A++
Sbjct: 737 VYTFKVTEDNRTWEHLVPGGITELRVDVSSPVESAVI----NNFELKSCDITESGYTALK 792
Query: 745 KIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVD 804
+ VT S S + T D ++ + + Y KGW+A DG+ + G V+
Sbjct: 793 ESGVDEVTFSDSTYQAQVTNDASENKMLCVPLFYQKGWTAQIDGEDAGVYNINEGMCGVE 852
Query: 805 VPKGKGTITLSF 816
VP G I L +
Sbjct: 853 VPSGTHEIVLKY 864
>gi|27467835|ref|NP_764472.1| hypothetical protein SE0917 [Staphylococcus epidermidis ATCC 12228]
gi|27315380|gb|AAO04514.1|AE016747_11 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
Length = 867
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 170/862 (19%), Positives = 334/862 (38%), Gaps = 102/862 (11%)
Query: 42 GDGFHQYVIFDIALRNILHGNGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVYF------ 95
GDGF Q + F + L FY + GLG ++ +YY LSPL++
Sbjct: 46 GDGFRQMMPFQMHLYEHFTSLKG-FYDASFGLGGDYVKSLAYYYS--LSPLMWINFSMIW 102
Query: 96 --------------FDLTNMPDAVYLTTLLKFGLIGLSTYFSLNKLFQSIPNPLKLA--- 138
F N Y+ T++ F F L + P P+ +A
Sbjct: 103 ILEQTINVNPHDISFWTINQLIMAYVRTVITFIF-----SFYLFSYLRLKPAPMFIATIL 157
Query: 139 --LSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKKKFLLYFTSLSILFIQNY 196
+ST +FT S + ++ I++P+ + ++ ++K + +++ N+
Sbjct: 158 YGMSTVVTYYNFTWS-----FYGNLLIMLPMSLWAIERFFKERKIGWFIFAIAYTLFSNF 212
Query: 197 YFGYMTALFLIFWYLCQISWDFKTRKSSFLDFIITSVLAGMASLILILPTLFDLQTHGEK 256
YF Y A+ + F+++ + + + ++ + A+L+ +L +++ L T
Sbjct: 213 YFSYYEAIVIGFYFIYRFAI---PHEKDIVNRWQKLYILVCATLLSVLVSIYGLYTGVSS 269
Query: 257 LTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLLPFILTILFFTLKSIKFHV 316
+ + Q + F F + T Y F + FI I F K + +
Sbjct: 270 FLDNDRTQNPN------FKITFFTNLFETNYNIFADGFYITISFIAIIALFCFKLYQHYY 323
Query: 317 KLIYAIFFTFLIASFYIEVLDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLNRLKEIK 376
++AI L+ + + D + G P R+ + + A + L EI
Sbjct: 324 YKLFAIATWILLIGSFSQWFDSAFNGFSLPQ---RRWVYFLALSTSVLIALFIQHLSEIS 380
Query: 377 IWNF-LVSLFLIVTGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISV-- 433
I + V++ + + GF+ + ++ F+ + +++L + K+ S+
Sbjct: 381 IKEYTFVAIPVFIYGFIFIALSERSVKWM----------FVALILIIVLFIFIKYKSLLT 430
Query: 434 --NLFAILISLFIMVEMSLNASSQ---MDGIAKEWGFASRSSY-----NRDIPAMESFST 483
++ +L+ LF+ ++ + S+ ++ + SSY N+ I M ST
Sbjct: 431 RTSMMVLLVVLFLAQQVLMTNDSRKITIEPYQTTIKTINDSSYRSPVLNKKIKYMHQSST 490
Query: 484 DIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTLDKLGFKSSGTNLN--LR 541
D R + N + ++YNG S +SS+ + D+ + + N R
Sbjct: 491 D---PLKRLDYFSYYALNSPLIYHYNGTSLYSSIFDGDILKYYDQTLQINMPVDKNSTYR 547
Query: 542 YANNSILADSLFGIQYNIS--DNPIDKYGFKD----IYQKDNLALYENQFSLPIAFASQF 595
Y NN SL+ +Q + D+ YGFK +KD N + P A +
Sbjct: 548 YLNNRANLMSLWDVQDRLRHPDDLNMPYGFKKKELITDKKDQWIHSVNTINYPSAHITNK 607
Query: 596 VYNDVKFNEHTLDNQASFLNQL-------ANVDFDYFSPILYEKTENTDDLISVTS---- 644
+Y+ K + LD + + L + AN DF +L +N + + S
Sbjct: 608 IYDARKL-KSPLDREQAMLKGVVLNHKSQANTDFKPNPNLLSNAKQNLNHANWIDSKHLK 666
Query: 645 --SSNEDAAIQYQIEVPENSQ-VYLSFTNLHFSNDKQKKVDILVNSEKKTFTTDNAFSFF 701
N + + +N + +Y+ S DK+ KV + S+++ + F
Sbjct: 667 VKQHNGGVTLNLPRNIVKNYKDMYIEMDVELLSPDKEHKVGVNEYSQERNRLSYKYRRFV 726
Query: 702 NLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTQTLTEAIQKIKEQPVTVSTSKNKVF 761
+ + K + +N+ F+ Y + QTL +A Q++ QPV V +N
Sbjct: 727 SPVTMRAKASNQLNIKM-SKGVYRFKVKGIYGENYQTLKKASQQL--QPVKVKKERNGFT 783
Query: 762 ATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITLSFIPNGF 821
++ + + Y +G A +GK ++++Q + V +G+ I LS+ P F
Sbjct: 784 IIKKKKEHGYLVLPMVYAEGMHAMANGKPLKVQQGNGIMTTIPVKEGQTKIKLSYTPPYF 843
Query: 822 ITGAICSFTSLLLFGIYNHRQK 843
S ++L ++ H K
Sbjct: 844 YLLITVSCIGIILSILFTHYVK 865
>gi|56964091|ref|YP_175822.1| hypothetical protein ABC2326 [Bacillus clausii KSM-K16]
gi|56910334|dbj|BAD64861.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 863
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 73/309 (23%), Positives = 126/309 (40%), Gaps = 56/309 (18%)
Query: 551 SLFGIQYNISDNPIDK---YGFKDIYQKDNLALYENQFSLPIAFASQFVYNDVKFNEHTL 607
SL +Q+ + D + YGF + D ALYENQ+ LP A A+ V
Sbjct: 551 SLMNVQFKLVDKKEETAIPYGFTLFSENDRYALYENQWLLPFARATSNV----------- 599
Query: 608 DNQASFLNQLANVDFDYFSPILYEKTENTDDLISVTSSSNEDAAIQYQIEVPENSQVYLS 667
FL + D + +SP++ E +++ ++ + +E + V +
Sbjct: 600 -----FLEE----DLEKYSPLVREHAMLEGIVLASGKATAKAVPETDVLERARINAVGGT 650
Query: 668 FTNLHFS-NDKQKKVDIL-VNSEKKTFTTDNAFSFFNLGYTKEKKTFNIN---------- 715
+ N + DK +DI+ VN + +F N T + T +N
Sbjct: 651 YKNGTLTVTDKVGGIDIVFVNRAAEEIDDYVSFYLQNQSKTAPRFTLQVNDYKAWRKSRS 710
Query: 716 -----------VSFPGNSQVSFESPT-FYRLDTQTL-TEAIQKIK-------EQPVTVST 755
+ P VS P Y L +L +E Q+++ +P+ VS
Sbjct: 711 SIYKTDANDLTIRVPSREIVSLRVPKGIYTLKDLSLQSETYQRLQYVYAREANKPIHVSF 770
Query: 756 SKNKVFATYDVQQ-DTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDVPKGKGTITL 814
+ +YD ++ DT + IPY+KGW +GKK ++++A F+ + +GK I
Sbjct: 771 EGRTLRLSYDNKKGDTHLTVPIPYEKGWEVSVNGKKQQVEKANYAFLGTAIAEGKNEIVF 830
Query: 815 SFIPNGFIT 823
S++P F T
Sbjct: 831 SYLPPYFRT 839
>gi|116513921|ref|YP_812827.1| 4-amino-4-deoxy-L-arabinose transferase related glycosyltransferase
of PMT family [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|116093236|gb|ABJ58389.1| 4-amino-4-deoxy-L-arabinose transferase related glycosyltransferase
of PMT family [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 953
Score = 57.0 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 124/572 (21%), Positives = 237/572 (41%), Gaps = 43/572 (7%)
Query: 8 YWTYFVSFIIPIIIMIGVYLSQG--IYWNSDTS----PLLGDGFHQYVIFDIALRNILHG 61
YW Y V F+ + G YL G + WN+D + PLL + +YV+ LR++ G
Sbjct: 16 YWKYSVFFLFLAACVFGPYLVTGHSLIWNTDAANQHLPLLVK-YREYVL--SFLRHLSQG 72
Query: 62 NGSLFYTFTSGLGLNFYALSSYY-LGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLS- 119
+++T GLG + +++ SYY +G + L F +++ A L LL+ +GL+
Sbjct: 73 PAE--WSWTMGLGSDLFSVFSYYTIGDVFAYLALLFPTSHLVFAYQLILLLRLYCVGLAF 130
Query: 120 TYFSLNKLFQSIPNPLKLALSTSYALMSFTV-SQLEIKTWLDVFILIPLIITGLQILITK 178
YF+ + F+ + + L S Y + ++ + + L + FIL PLI+ L+ L+
Sbjct: 131 VYFARHFDFK---DGVVLIGSGVYMVNAYLLYAALAQPMFTTTFILFPLIVVQLERLLQG 187
Query: 179 KKFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKS-----SFLDFIITSV 233
F + + NYY ++ L I + + W K + S+
Sbjct: 188 GSAWPLFGVFVWMLVSNYYLAFVLGLGAIIYLF--LRWGLAYWKKIPFWPTIKKLFFASL 245
Query: 234 LAGMASLILILPTLFDLQTHGEKLTEVTKFQT-ESSWYLDLFAKQFIGSFDTTKYGAIPM 292
A + S L+LP L + ++ T ++Y L K+ I D + +
Sbjct: 246 GAVLLSAGLLLPELLAVVNSTRTGSQFANGLTFYPAYYYLLLPKELI---DGDNWKLMFW 302
Query: 293 IFVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPN--MFL 350
+GL IL L + ++ + + +L+ A + V +F GM N L
Sbjct: 303 SALGLASIILPALVYLFRNWRKY-RLVAASLLLGAVMLLIPAVGAVFNGGMSASNRWTLL 361
Query: 351 HRYAWIFSTLLIYTA-AEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYS-FLTDLN 408
+ FS ++ A +E KE+++ ++L+ +A +L++ Y FL +
Sbjct: 362 LYLPFAFSVMVFVKAISEQAVSQKEMRLIFTTSGIYLVY--LVAMFFLENDYKLFLPVIF 419
Query: 409 ILLTL--EFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFA 466
+LL+L +LV L + ++ NL + + + A+ + G ++
Sbjct: 420 LLLSLGASYLVNEGRALKRALLLTVAANLAFNALYAALPYNGNFAANMLVRGEYEQIAED 479
Query: 467 SRSSYNRDIPA-MESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASST 525
N +PA +T NQF +KL + + +S + S++N+
Sbjct: 480 RYGGLNHILPAGFYRVNTVSNNQFVSQKKL-----FNDLTSGLANVSSYYSIQNQYLGQF 534
Query: 526 LDKLGFKSSGTNLNLRYANNSILADSLFGIQY 557
LG N+ ++ + ++ G++Y
Sbjct: 535 STDLGNLQYDNNIPFHQLDDRTILNNFLGVRY 566
>gi|104773914|ref|YP_618894.1| hypothetical protein Ldb0855 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103422995|emb|CAI97677.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
Length = 951
Score = 56.6 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 122/571 (21%), Positives = 234/571 (40%), Gaps = 41/571 (7%)
Query: 8 YWTYFVSFIIPIIIMIGVYLSQG--IYWNSDTS----PLLGDGFHQYVIFDIALRNILHG 61
YW Y V F+ + G YL G + WN+D + PLL + +YV+ LR++ G
Sbjct: 14 YWKYSVFFLFLAACVFGPYLVTGHSLIWNTDAANQHLPLLVK-YREYVL--SFLRHLSQG 70
Query: 62 NGSLFYTFTSGLGLNFYALSSYY-LGSFLSPLVYFFDLTNMPDAVYLTTLLKFGLIGLS- 119
+++T GLG + +++ SYY +G + L F +++ A L LL+ +GL+
Sbjct: 71 PAE--WSWTMGLGSDLFSVFSYYTIGDVFAYLALLFPTSHLVFAYQLILLLRLYCVGLAF 128
Query: 120 TYFSLNKLFQSIPNPLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLQILITKK 179
YF+ + F+ + + + A + + + L + FIL PLI+ L+ L+
Sbjct: 129 VYFARHFDFKDSVVLIGIGVYMVNAYLLY--AALAQPMFTTTFILFPLIVVQLERLLQGG 186
Query: 180 KFLLYFTSLSILFIQNYYFGYMTALFLIFWYLCQISWDFKTRKS-----SFLDFIITSVL 234
F + + NYY ++ L I + + W K + S+
Sbjct: 187 SAWPLFGVFVWMLVSNYYLAFVLGLGAIIYLF--LRWGLAYWKKIPFWPTIKKLFFASLG 244
Query: 235 AGMASLILILPTLFDLQTHGEKLTEVTKFQT-ESSWYLDLFAKQFIGSFDTTKYGAIPMI 293
A + S L+LP L + ++ T ++Y L K+ I D + +
Sbjct: 245 AVLLSAGLLLPELLAVVNSTRTGSQFANGLTFYPAYYYLLLPKELI---DGDNWKLMFWS 301
Query: 294 FVGLLPFILTILFFTLKSIKFHVKLIYAIFFTFLIASFYIEVLDLFWQGMHTPN--MFLH 351
+GL IL L + ++ + + +L+ A + V +F GM N L
Sbjct: 302 ALGLASIILPALVYLFRNWRKY-RLVAASLLLGAVMLLIPAVGAVFNGGMSASNRWTLLL 360
Query: 352 RYAWIFSTLLIYTA-AEVLNRLKEIKIWNFLVSLFLIVTGFLATIYLKSHYS-FLTDLNI 409
+ FS ++ A +E KE+++ ++L+ +A +L++ Y FL + +
Sbjct: 361 YLPFAFSVMVFVKAISEQAVSQKEMRLIFTTSGIYLVY--LVAMFFLENDYKLFLPVIFL 418
Query: 410 LLTL--EFLVVYSLLLLAVIKKFISVNLFAILISLFIMVEMSLNASSQMDGIAKEWGFAS 467
LL+L +LV L + ++ NL + + + A+ + G ++
Sbjct: 419 LLSLGASYLVNEGRALKRALLLTVAANLAFNALYAALPYNGNFAANMLVRGEYEQIAEDR 478
Query: 468 RSSYNRDIPA-MESFSTDIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSASSTL 526
N +PA +T NQF +KL + + +S + S++N+
Sbjct: 479 YGGLNHILPAGFYRVNTVSNNQFVSQKKL-----FNDLTSGLANVSSYYSIQNQYLGQFS 533
Query: 527 DKLGFKSSGTNLNLRYANNSILADSLFGIQY 557
LG N+ ++ + ++ G++Y
Sbjct: 534 TDLGNLQYDNNIPFHQLDDRTILNNFLGVRY 564
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.325 0.139 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,915,797,644
Number of Sequences: 5470121
Number of extensions: 125107411
Number of successful extensions: 476467
Number of sequences better than 1.0e-05: 111
Number of HSP's better than 0.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 475873
Number of HSP's gapped (non-prelim): 156
length of query: 847
length of database: 1,894,087,724
effective HSP length: 142
effective length of query: 705
effective length of database: 1,117,330,542
effective search space: 787718032110
effective search space used: 787718032110
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 134 (56.2 bits)