Top 20 Categories

Top 20 InterPro

161	NULL	NULL
89	IPR003593	AAA+ ATPase, core
58	IPR002198	Short-chain dehydrogenase/reductase SDR
57	IPR003439	ABC transporter related
46	IPR000847	Bacterial regulatory protein, LysR
45	IPR001789	Response regulator receiver
44	IPR002347	Glucose/ribitol dehydrogenase
43	IPR005119	LysR, substrate-binding
42	IPR011701	Major facilitator superfamily MFS-1
39	IPR007114	Major facilitator superfamily
37	IPR003594	ATP-binding region, ATPase-like
32	IPR005467	Histidine kinase
31	IPR013968	Polyketide synthase, KR
31	IPR004358	Histidine kinase related protein, C-terminal
30	IPR001647	Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal
29	IPR003661	Histidine kinase A, N-terminal
26	IPR001509	NAD-dependent epimerase/dehydratase
26	IPR000515	Binding-protein-dependent transport systems inner membrane component
25	IPR013027	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
24	IPR002197	Helix-turn-helix, Fis-type

Top 20 HMMPfam

55	PF00106	adh_short
53	PF00005	ABC_tran
46	PF00126	HTH_1
43	PF03466	LysR_substrate
43	PF00072	Response_reg
42	PF07690	MFS_1
37	PF02518	HATPase_c
31	PF08659	KR
29	PF00512	HisKA
29	PF00440	TetR_N
26	PF01370	Epimerase
26	PF00528	BPD_transp_1
24	PF00561	Abhydrolase_1
21	PF00583	Acetyltransf_1
20	PF08240	ADH_N
20	PF00593	TonB_dep_Rec
19	PF00702	Hydrolase
19	PF00107	ADH_zinc_N
18	PF07715	Plug
18	PF00529	HlyD

Top 20 HMMTigr

23	TIGR01409	TAT_signal_seq
11	TIGR01730	RND_mfp
10	TIGR00231	small_GTP
9	TIGR00229	sensory_box
8	TIGR02937	sigma70-ECF
7	TIGR01494	ATPase_P-type
7	TIGR01352	tonB_Cterm
6	TIGR01728	SsuA_fam
6	TIGR00778	ahpD_dom
5	TIGR01783	TonB-siderophor
5	TIGR01552	phd_fam
5	TIGR01509	HAD-SF-IA-v3
5	TIGR00738	rrf2_super
4	TIGR02532	IV_pilin_GFxxxE
4	TIGR01845	outer_NodT
4	TIGR01549	HAD-SF-IA-v1
4	TIGR01525	ATPase-IB_hvy
4	TIGR00638	Mop
4	TIGR00049	TIGR00049
3	TIGR03396	PC_PLC

Top 20 ProfileScan

53	PS50893	ABC_TRANSPORTER_2
52	PS00013	PROKAR_LIPOPROTEIN
45	PS50110	RESPONSE_REGULATORY
43	PS50931	HTH_LYSR
39	PS50850	MFS
32	PS50109	HIS_KIN
29	PS50977	HTH_TETR_2
26	PS50928	ABC_TM1
22	PS51186	GNAT
18	PS01124	HTH_ARAC_FAMILY_2
16	PS50943	HTH_CROC1
16	PS50293	TPR_REGION
14	PS51192	HELICASE_ATP_BIND_1
14	PS51007	CYTC
14	PS50885	HAMP
13	PS50005	TPR
11	PS51194	HELICASE_CTER
11	PS50045	SIGMA54_INTERACT_4
10	PS51085	2FE2S_FER_2
10	PS50975	ATP_GRASP

Top 20 FPrintScan

44	PR00081	GDHRDH
31	PR00344	BCTRLSENSOR
31	PR00080	SDRFAMILY
24	PR01590	HTHFIS
24	PR00368	FADPNR
22	PR00455	HTHTETR
20	PR00039	HTHLYSR
18	PR00411	PNDRDTASEI
17	PR00032	HTHARAC
16	PR01167	INSADHFAMILY
14	PR00111	ABHYDROLASE
13	PR00469	PNDRDTASEII
11	PR00702	ACRIFLAVINRP
11	PR00420	RNGMNOXGNASE
11	PR00069	ALDKETRDTASE
10	PR00412	EPOXHYDRLASE
9	PR01415	ANKYRIN
9	PR00154	AMPBINDING
8	PR00353	4FE4SFRDOXIN
7	PR00834	PROTEASES2C

Top 20 BlastProDom

52	PD000006	sp_Y796_METJA_Q58206;
45	PD000039	sp_Q89EF5_BRAJA_Q89EF5;
14	PD000329	sp_Q89WQ8_BRAJA_Q89WQ8;
13	PD000139	sp_Q98I59_RHILO_Q98I59;
12	PD000288	sp_Q9A528_CAUCR_Q9A528;
10	PD000307	sp_Q89H10_BRAJA_Q89H10;
5	PD023420	sp_Q983M1_RHILO_Q983M1;
5	PD003632	sp_Q8U800_AGRT5_Q8U800;
5	PD002691	sp_ILD1_RHILO_Q98BZ8;
5	PD001895	sp_MTGA_RHIME_Q92L23;
5	PD000945	sp_Q6N676_RHOPA_Q6N676;
5	PD000621	sp_Q9ZAL0_VIBCH_Q9ZAL0;
4	PD008688	sp_Q8EAD9_SHEON_Q8EAD9;
4	PD005328	sp_Q6N4M1_RHOPA_Q6N4M1;
4	PD004032	sp_Q6FC95_ACIAD_Q6FC95;
4	PD002183	sp_Q6N6Z3_RHOPA_Q6N6Z3;
4	PD000930	sp_Q6N0H8_RHOPA_Q6N0H8;
4	PD000511	sp_Q7NDZ5_GLOVI_Q7NDZ5;
3	PD003528	sp_Q98AT4_RHILO_Q98AT4;
3	PD001961	sp_Q9A491_CAUCR_Q9A491;

Top 20 COGs

120	COG1028	Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)
120	COG0451	Nucleoside-diphosphate-sugar epimerase
110	COG4988	ABC-type transport system involved in cytochrome bd biosynthesis ATPase and permease components
110	COG1120	ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components
108	COG0444	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
106	COG4987	ABC-type transport system involved in cytochrome bd biosynthesis fused ATPase and permease components
106	COG4555	ABC-type Na+ transport system ATPase component
106	COG1124	ABC-type dipeptide/oligopeptide/nickel transport system ATPase component
104	COG2197	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
104	COG1134	ABC-type polysaccharide/polyol phosphate transport system ATPase component
100	COG4615	ABC-type siderophore export system fused ATPase and permease components
90	COG0745	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
88	COG4565	Response regulator of citrate/malate metabolism
88	COG3437	Response regulator containing a CheY-like receiver domain and an HD-GYP domain
78	COG3279	Response regulator of the LytR/AlgR family
74	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
74	COG2201	Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
61	COG4753	Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
59	COG2274	ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain
58	COG4148	ABC-type molybdate transport system ATPase component

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