R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 147 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|7292702|gb|AAF48099.1| (AE003487) CG15741 gene product [Drosophila
melanogaster]
Length = 135
Frame 1 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | 135
0 50 100
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 0.00019, P = 0.00019
Identities = 26/70 (37%), Positives = 43/70 (61%), Frame = +1
Query: 64 MLMLATSLALVAISAGQAPSPAPAHTVSSPPASAQSP-SSTSP-SSISPSPSTPSNAFLH 237
+L+LA+ LA+ + ++ +P+ + + S+ P S+ SP SSTSP SS SP+ S+ S++
Sbjct: 6 VLILASLLAVASSTSSTSPASSTSPASSTSPTSSTSPTSSTSPTSSTSPTSSSSSSSSST 65
Query: 238 GTTTLALTLP 267
TTT P
Sbjct: 66 ATTTTTTVAP 75
Score = 91 (32.0 bits), Expect = 0.022, P = 0.022
Identities = 28/71 (39%), Positives = 44/71 (61%), Frame = +1
Query: 64 MLMLATSLALVAISAGQAPSPAPAHTVSSPPASAQSP-SSTSP-SSISP---SPSTPSNA 228
+L+LA+ LA+ + ++ +P+ + + S+ P S+ SP SSTSP SS SP S S+ S+
Sbjct: 6 VLILASLLAVASSTSSTSPASSTSPASSTSPTSSTSPTSSTSPTSSTSPTSSSSSSSSST 65
Query: 229 FLHGTTTLALT 261
TTT+A T
Sbjct: 66 ATTTTTTVAPT 76
Score = 74 (26.0 bits), Expect = 6.8, P = 1.0
Identities = 23/69 (33%), Positives = 39/69 (56%), Frame = +1
Query: 61 AMLMLATSLALVAISAGQAPSPAPAHTVSSPPASAQSP-SSTSPSSISPSPS-----TPS 222
++L +A+S + + ++ +P+ + + T S+ P S+ SP SSTSP+S S S S T +
Sbjct: 11 SLLAVASSTSSTSPASSTSPASSTSPTSSTSPTSSTSPTSSTSPTSSSSSSSSSTATTTT 70
Query: 223 NAFLHGTTT 249
TTT
Sbjct: 71 TTVAPTTTT 79
>gi|7267545|emb|CAB78027.1| (AL161513) arabinogalactan-protein homolog
[Arabidopsis thaliana] >gi|10880497|gb|AAG24278.1|AF195891_1
(AF195891) arabinogalactan protein [Arabidopsis thaliana]
Length = 127
Frame 1 hits (HSPs): ___________________________________
__________________________________________________
Database sequence: | | | | 127
0 50 100
Plus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.00066, P = 0.00066
Identities = 26/47 (55%), Positives = 34/47 (72%), Frame = +1
Query: 85 LALVAISA-GQAPSPAPAHTVSSPPASAQSPSSTSPS-SISPSPS-TPS 222
LAL+A SA QAP PAP T S P+ AQ P + +P+ SI+P+P+ TPS
Sbjct: 12 LALIASSAIAQAPGPAP--TRSPLPSPAQPPRTAAPTPSITPTPTPTPS 58
Score = 73 (25.7 bits), Expect = 7.4, P = 1.0
Identities = 18/43 (41%), Positives = 22/43 (51%), Frame = +1
Query: 118 PSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTPSNAFLHGTT 246
PS P SPPA + PSS SP + P+ TP A + G T
Sbjct: 57 PSATPTAAPVSPPAGSPLPSSASPPA-PPTSLTPDGAPVAGPT 98
>gi|11357181|pir||T49996 AtAGP4 - Arabidopsis thaliana
>gi|3883126|gb|AAC77826.1| (AF082301) arabinogalactan-protein
[Arabidopsis thaliana] >gi|5059001|gb|AAD38870.1|AF060874_1
(AF060874) AtAGP4 [Arabidopsis thaliana]
>gi|7671460|emb|CAB89400.1| (AL353995) AtAGP4 [Arabidopsis
thaliana]
Length = 135
Frame 1 hits (HSPs): __________________________________________________
__________________________________________________
Database sequence: | | | | 135
0 50 100
Plus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.0039, P = 0.0039
Identities = 30/78 (38%), Positives = 40/78 (51%), Frame = +1
Query: 43 GMALTRAMLMLATSLALVAISA-GQAPSPAPAHT---VSSPPASAQSPSSTSPSSISPSP 210
G + + LMLA L A SA QAP+P P T + PP + P +T P + +P+P
Sbjct: 2 GSKIVQVFLMLA----LFATSALAQAPAPTPTATPPPATPPPVATPPPVATPPPAATPAP 57
Query: 211 STPSNAFLHGTTTLALTLPLFA 276
+TP A T A T P A
Sbjct: 58 ATPPPA---ATPAPATTPPSVA 76
Score = 83 (29.2 bits), Expect = 0.40, P = 0.33
Identities = 29/59 (49%), Positives = 35/59 (59%), Frame = +1
Query: 115 APSPAPAHTVSSPPAS---AQSPSST-SPSSISPSPSTP-SN-AFLHGTTTLALTLPLFA 276
APSPA T +SPPA SPSS PS SP+PS SN AF GT A+ ++A
Sbjct: 76 APSPADVPT-ASPPAPEGPTVSPSSAPGPSDASPAPSAAFSNKAFFAGTAFAAI---MYA 131
Query: 277 GLL 285
+L
Sbjct: 132 AVL 134
>gi|3883128|gb|AAC77827.1| (AF082302) arabinogalactan-protein [Arabidopsis
thaliana] >gi|12322940|gb|AAG51456.1|AC069160_2 (AC069160)
hypothetical protein [Arabidopsis thaliana]
Length = 133
Frame 1 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | 133
0 50 100
Plus Strand HSPs:
Score = 94 (33.1 bits), Expect = 0.0043, P = 0.0043
Identities = 27/53 (50%), Positives = 35/53 (66%), Frame = +1
Query: 85 LALVAISA-GQAPSPAPAHTVSSPPAS---AQSPSSTSPS---SISPSPSTPSNA 228
LALVA S QAP PAP T+S PA+ +QSP +T+P+ S +P PS P+ A
Sbjct: 12 LALVASSVVAQAPGPAP--TISPLPATPTPSQSPRATAPAPSPSANPPPSAPTTA 64
>gi|10944741|emb|CAC14090.1| (AJ299418) hypothetical protein [Arabidopsis
thaliana]
Length = 164
Frame 1 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | 164
0 50 100 150
Plus Strand HSPs:
Score = 99 (34.8 bits), Expect = 0.0059, P = 0.0059
Identities = 22/56 (39%), Positives = 32/56 (57%), Frame = +1
Query: 55 TRAMLMLATSLALVAISAGQAPSPAPAHTVSSPPASAQSPSSTSPSSISPSPS-TP 219
++A +L S+ L+ S QAP AP+ ++S PP S+ SS P +SP P TP
Sbjct: 7 SQAFFLLTLSMVLIPFSLAQAPMMAPSGSMSMPPMSSGGGSSVPPPVMSPMPMMTP 62
>gi|7488232|pir||T00519 proline-rich protein T20D16.24 - Arabidopsis thaliana
>gi|2642449|gb|AAB87117.1| (AC002391) hypothetical protein
[Arabidopsis thaliana] >gi|11935086|gb|AAG41963.1|AF305939_1
(AF305939) arabinogalactan protein AGP17 [Arabidopsis thaliana]
Length = 185
Frame 1 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | 185
0 50 100 150
Plus Strand HSPs:
Score = 99 (34.8 bits), Expect = 0.010, P = 0.010
Identities = 24/58 (41%), Positives = 35/58 (60%), Frame = +1
Query: 52 LTRAMLMLATSLALVAISAG-QAPSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTPSN 225
+TR +L+ T + +V I+ G Q+P+ AP H SP S P TSP+ ISP+ TP +
Sbjct: 1 MTRNILLTVTLICIVFITVGGQSPATAPIH---SPSTSPHKPKPTSPA-ISPAAPTPES 55
Score = 85 (29.9 bits), Expect = 0.72, P = 0.51
Identities = 25/66 (37%), Positives = 37/66 (56%), Frame = +1
Query: 52 LTRAMLMLATSLALVAISAG-QAPSPAPAHTVS-SP----PAS-AQSPSSTSPSSISPSP 210
+TR +L+ T + +V I+ G Q+P+ AP H+ S SP P S A SP++ +P S
Sbjct: 1 MTRNILLTVTLICIVFITVGGQSPATAPIHSPSTSPHKPKPTSPAISPAAPTPESTEAPA 60
Query: 211 STPSNA 228
TP A
Sbjct: 61 KTPVEA 66
>gi|9759619|dbj|BAB11561.1| (AB011479) gene_id:MNA5.12~unknown protein
[Arabidopsis thaliana]
Length = 130
Frame 1 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | 130
0 50 100
Plus Strand HSPs:
Score = 91 (32.0 bits), Expect = 0.012, P = 0.012
Identities = 23/57 (40%), Positives = 35/57 (61%), Frame = +1
Query: 85 LALVAISA-GQAPSPAPAHTVSSPP------ASAQSPSSTSPSSISPSP--STPSNA 228
+AL S QAP+P+P TV+ PP A+ +P++T P ++SP+P S PS+A
Sbjct: 12 VALFTTSCLAQAPAPSPTTTVTPPPVATPPPAATPAPTTTPPPAVSPAPTSSPPSSA 68
Score = 87 (30.6 bits), Expect = 0.073, P = 0.071
Identities = 18/34 (52%), Positives = 25/34 (73%), Frame = +1
Query: 118 PSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTP 219
P+ +PA T SSPP+SA SPSS +P++ P+P P
Sbjct: 54 PAVSPAPT-SSPPSSAPSPSSDAPTASPPAPEGP 86
>gi|8247310|emb|CAB92936.1| (AJ290927) hypothetical protein [Plasmodium
falciparum]
Length = 98
Frame 1 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | | | 98
0 20 40 60 80
Plus Strand HSPs:
Score = 79 (27.8 bits), Expect = 0.053, P = 0.051
Identities = 19/41 (46%), Positives = 29/41 (70%), Frame = +1
Query: 103 SAGQAPSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTPSN 225
S+ +PS + + + SSP AS+ S SS+SP+S S SPS+ S+
Sbjct: 17 SSSSSPSSSSSSSSSSPSASSSS-SSSSPASSSSSPSSTSD 56
Score = 69 (24.3 bits), Expect = 3.0, P = 0.95
Identities = 15/40 (37%), Positives = 27/40 (67%), Frame = +1
Query: 109 GQAPSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTPSNA 228
G + S +P+ + SSP +S+ S SS+ +S S S S+P+++
Sbjct: 8 GNSSSHSPSSSSSSPSSSSSSSSSSPSASSSSSSSSPASS 47
Score = 68 (23.9 bits), Expect = 4.9, P = 0.99
Identities = 20/49 (40%), Positives = 31/49 (63%), Frame = +1
Query: 88 ALVAISAGQAPSPAPAHTVSSPPASAQSPS-STSPSSISP--SPSTPSN 225
++V S+ +PS + + SS +S+ SPS S+S SS SP S S+PS+
Sbjct: 5 SVVGNSSSHSPSSSSSSPSSSSSSSSSSPSASSSSSSSSPASSSSSPSS 53
Score = 67 (23.6 bits), Expect = 9.0, P = 1.0
Identities = 15/35 (42%), Positives = 23/35 (65%), Frame = +1
Query: 103 SAGQAPSPAPAHTVSSPPASAQSPSSTSPSSISPS 207
S+ +PS + + + SSP +S+ SPSSTS S + S
Sbjct: 28 SSSSSPSASSSSSSSSPASSSSSPSSTSDDSKNAS 62
>gi|477243|pir||A48444 merozoite surface antigen MSA-1 - Babesia bovis
(fragment)
Length = 285
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | | | 285
0 50 100 150 200 250
Plus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.10, P = 0.097
Identities = 23/61 (37%), Positives = 32/61 (52%), Frame = +1
Query: 112 QAPSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTPSNAF-LHGTTTLALTLPLFAGLLL 288
+ P+P A V PPAS SP +P++ SPSP + N GTT A + + GL +
Sbjct: 215 EVPAPGDASGVQQPPASGTSPQGPAPTTPSPSPESSGNLQGQQGTTKPAGSSFTYGGLTV 274
Query: 289 A 291
A
Sbjct: 275 A 275
>gi|3883122|gb|AAC77824.1| (AF082299) arabinogalactan-protein [Arabidopsis
thaliana]
Length = 126
Frame 1 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | 126
0 50 100
Plus Strand HSPs:
Score = 85 (29.9 bits), Expect = 0.10, P = 0.099
Identities = 24/62 (38%), Positives = 33/62 (53%), Frame = +1
Query: 85 LALVAISA-GQAPSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTPSNAFLHGTTTLALT 261
L +A S QAP+PAP TV+ PP + ++ +PS I+ SP P N TT T
Sbjct: 7 LGFLATSCLAQAPAPAPT-TVTPPPTALPPVTAETPSPIA-SPPVPVNEPTPAPTTSPTT 64
Query: 262 LPL 270
P+
Sbjct: 65 SPV 67
>gi|4544458|gb|AAD22366.1|AC006592_23 (AC006592) unknown protein [Arabidopsis
thaliana]
Length = 131
Frame 1 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | 131
0 50 100
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 0.11, P = 0.11
Identities = 27/72 (37%), Positives = 38/72 (52%), Frame = +1
Query: 55 TRAMLMLATSLALVAISA-GQAPSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTPSNAF 231
++AM L L +A S QAP+PAP TV+ PP + ++ +PS I+ SP P N
Sbjct: 3 SKAMQALIF-LGFLATSCLAQAPAPAPT-TVTPPPTALPPVTAETPSPIA-SPPVPVNEP 59
Query: 232 LHGTTTLALTLPL 270
TT T P+
Sbjct: 60 TPAPTTSPTTSPV 72
>gi|7430876|pir||T10484 blue copper protein stellacyanin precursor - cucumber
>gi|1513180|gb|AAC32421.1| (U65511) stellacyanin [Cucumis sativus]
Length = 182
Frame 1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | 182
0 50 100 150
Plus Strand HSPs:
Score = 91 (32.0 bits), Expect = 0.12, P = 0.11
Identities = 25/50 (50%), Positives = 32/50 (64%), Frame = +1
Query: 139 TVSSPPASAQSPSSTSPSSISPSPS-TPSNAFLHGTTTLALTLPLFAGLLL 288
TVS PP S+ PSS+ PSS+ P PS + SNA + TL LT F+ LL+
Sbjct: 134 TVSMPPPSSSPPSSSPPSSVMPPPSPSSSNALM---ATLYLT---FSALLV 178
>gi|9631431 ref|NP_048304.1| ORF MSV234 hypthetical protein [Melanoplus
sanguinipes entomopoxvirus] >gi|11361205|pir||T28394 hypothetical
protein MSV234 [imported] - Melanoplus sanguinipes entomopoxvirus
>gi|4049784|gb|AAC97744.1| (AF063866) ORF MSV234 hypthetical
protein [Melanoplus sanguinipes entomopoxvirus]
Length = 117
Frame 2 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | 117
0 50 100
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 0.12, P = 0.11
Identities = 24/84 (28%), Positives = 33/84 (39%), Frame = +2
Query: 125 LHPHTQFHHRLQVPKAHLPHHHHQYLRRHQPRATPSFMEPPPWPSLYHSLQAYFLLKAYF 304
LH + FHH V H HHHH ++ H +H YF L +YF
Sbjct: 24 LHSYFHFHHHFHV-YFHFHHHHHFHVYFHLHH--------------HHHFHVYFHLHSYF 68
Query: 305 NFIRFTFIFAFPYLSHSLLYEHAF 376
+F F F + S+ + H F
Sbjct: 69 HFHHHHFHVYFHFHSYFHFHHHHF 92
>gi|2135627|pir||I63131 metallothionein old gene name 'MT2' - human (fragment)
>gi|187528|gb|AAA59584.1| (M26637) metallothionein old gene name
'MT2' [Homo sapiens]
Length = 66
Frame 1 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | | 66
0 20 40 60
Plus Strand HSPs:
Score = 76 (26.8 bits), Expect = 0.12, P = 0.11
Identities = 18/56 (32%), Positives = 29/56 (51%), Frame = +1
Query: 100 ISAGQAPSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTPSNAFLHGTTTLALTLP 267
++ AP+PA A + ++PPA + +P+++S PS P A G T A P
Sbjct: 12 VTPAPAPAPANAKSANAPPAR----KAAAPAALSAVPSVPRAASAKGRRTSAAAAP 63
>gi|474286|gb|AAA27800.1| (M77192) merozoite surface protein [Babesia bovis]
Length = 354
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 354
0 150 300
Plus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.15, P = 0.14
Identities = 23/61 (37%), Positives = 32/61 (52%), Frame = +1
Query: 112 QAPSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTPSNAF-LHGTTTLALTLPLFAGLLL 288
+ P+P A V PPAS SP +P++ SPSP + N GTT A + + GL +
Sbjct: 284 EVPAPGDASGVQQPPASGTSPQGPAPTTPSPSPESSGNLQGQQGTTKPAGSSFTYGGLTV 343
Query: 289 A 291
A
Sbjct: 344 A 344
>gi|100216|pir||S14975 extensin class II (clone uJ-2) - tomato
>gi|1345538|emb|CAA39216.1| (X55686) extensin (class II)
[Lycopersicon esculentum]
Length = 82
Frame 1 hits (HSPs): ______________________________
Annotated Domains: ____________________________________________
__________________________________________________
Database sequence: | | | | | | 82
0 20 40 60 80
__________________
Annotated Domains:
DOMO DM05291: 12..82
__________________
Plus Strand HSPs:
Score = 75 (26.4 bits), Expect = 0.15, P = 0.14
Identities = 15/35 (42%), Positives = 20/35 (57%), Frame = +1
Query: 118 PSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTPS 222
P P+P +T SSPP + SP + SP P +PS
Sbjct: 8 PKPSPPYTYSSPPPPSPSPPPPTYYYSSPPPPSPS 42
Score = 73 (25.7 bits), Expect = 0.26, P = 0.23
Identities = 19/43 (44%), Positives = 23/43 (53%), Frame = +1
Query: 118 PSPAPAHTVSSPPASAQSP-------SSTSPSSISPSPSTPSN 225
P P+P +T SSPP + SP SS P S SP P T S+
Sbjct: 8 PKPSPPYTYSSPPPPSPSPPPPTYYYSSPPPPSPSPPPPTYSS 50
Score = 62 (21.8 bits), Expect = 4.7, P = 0.99
Identities = 16/35 (45%), Positives = 19/35 (54%), Frame = +1
Query: 115 APSPAP-AHTVSSPPASAQSPSSTSPSSISPSPSTP 219
+PSP P + SSPP SPS P+ SP P P
Sbjct: 23 SPSPPPPTYYYSSPPPP--SPSPPPPTYSSPPPPPP 56
>gi|421915|pir||S29903 cell wall proline-rich protein - English ivy (fragment)
>gi|829268|emb|CAA48411.1| (X68334) cell wall proline rich protein
[Hedera helix]
Length = 99
Frame 2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | | 99
0 20 40 60 80
Plus Strand HSPs:
Score = 75 (26.4 bits), Expect = 0.15, P = 0.14
Identities = 20/58 (34%), Positives = 27/58 (46%), Frame = +2
Query: 77 PRP*LWWQSPQV-KPPPLHPHTQFHHRLQVPKAHLPHHHHQYLRRHQPRATPSFMEPPP 250
P+P ++ P V KPPP+H H L P+ H P H+ P P + PPP
Sbjct: 31 PQP--EYKPPPVHKPPPVHKPPPVEHELPTPE-HKPPPEHK-----PPHLPPIIVRPPP 81
Score = 73 (25.7 bits), Expect = 0.26, P = 0.23
Identities = 18/49 (36%), Positives = 23/49 (46%), Frame = +2
Query: 104 PQVKPPPLHPHTQFHHRLQVPKAH-LPHHHHQYLRRHQP-RATPSFMEPPP 250
P+ KPPP+H H P H LP H+ H+P P + PPP
Sbjct: 33 PEYKPPPVHKPPPVHK--PPPVEHELPTPEHKPPPEHKPPHLPPIIVRPPP 81
>gi|7298539|gb|AAF53758.1| (AE003661) CG15174 gene product [Drosophila
melanogaster]
Length = 131
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 131
0 50 100
Plus Strand HSPs:
Score = 85 (29.9 bits), Expect = 0.16, P = 0.14
Identities = 15/27 (55%), Positives = 16/27 (59%), Frame = +2
Query: 116 PPPLHPHTQFHHRLQVPKAHLPHHHHQ 196
PPPLH H Q H+LQ P PH H Q
Sbjct: 8 PPPLHHHHQHQHQLQHPPQQQPHPHQQ 34
>gi|7488174|pir||A71438 probable resistance protein - Arabidopsis thaliana
Length = 906
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | || 906
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 99 (34.8 bits), Expect = 0.16, P = 0.15
Identities = 22/56 (39%), Positives = 32/56 (57%), Frame = +1
Query: 55 TRAMLMLATSLALVAISAGQAPSPAPAHTVSSPPASAQSPSSTSPSSISPSPS-TP 219
++A +L S+ L+ S QAP AP+ ++S PP S+ SS P +SP P TP
Sbjct: 7 SQAFFLLTLSMVLIPFSLAQAPMMAPSGSMSMPPMSSGGGSSVPPPVMSPMPMMTP 62
>gi|11349249|pir||E83446 hypothetical protein PA1592 [imported] - Pseudomonas
aeruginosa (strain PAO1) >gi|9947556|gb|AAG04981.1|AE004587_5
(AE004587) hypothetical protein [Pseudomonas aeruginosa]
Length = 78
Frame 1 hits (HSPs): ________________________________________
__________________________________________________
Database sequence: | | | | | 78
0 20 40 60
Plus Strand HSPs:
Score = 74 (26.0 bits), Expect = 0.20, P = 0.18
Identities = 25/59 (42%), Positives = 35/59 (59%), Frame = +1
Query: 67 LMLATSLALVAISAGQ---APSPA-PA-HTVSSPPASAQS-PSSTSPSSISPS-PSTPS 222
L+LA SL L A + A +PA PA T S PA+ + PS+ +PSS +P+ P TP+
Sbjct: 9 LLLAASLGLAACDKKEEDKAAAPAAPATETQPSAPATPPAEPSAPAPSSDTPATPQTPA 67
Score = 60 (21.1 bits), Expect = 8.0, P = 1.0
Identities = 25/62 (40%), Positives = 36/62 (58%), Frame = +1
Query: 67 LMLATSLALVAISAGQ---APSPA-PAHTV-----SSPPA--SAQSPSSTSPSSI-SPSP 210
L+LA SL L A + A +PA PA ++PPA SA +PSS +P++ +P+P
Sbjct: 9 LLLAASLGLAACDKKEEDKAAAPAAPATETQPSAPATPPAEPSAPAPSSDTPATPQTPAP 68
Query: 211 STP 219
TP
Sbjct: 69 -TP 70
>gi|10177249|dbj|BAB10717.1| (AB007644) contains similarity to
phytocyanin/early nodulin-like protein~gene_id:K19P17.3
[Arabidopsis thaliana]
Length = 370
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 370
0 150 300
Plus Strand HSPs:
Score = 93 (32.7 bits), Expect = 0.27, P = 0.24
Identities = 22/44 (50%), Positives = 29/44 (65%), Frame = +1
Query: 103 SAGQAPSPAPAHTVSSPPASAQSPS-STSP--SSISPSPSTPSN 225
S APS +PAH+ S PA+ +SPS S+SP S +PSP TP +
Sbjct: 256 SPAHAPSHSPAHSPSHSPATPKSPSPSSSPAQSPATPSPMTPQS 299
Score = 87 (30.6 bits), Expect = 1.5, P = 0.79
Identities = 21/40 (52%), Positives = 28/40 (70%), Frame = +1
Query: 103 SAGQAPSPAPAHTVSSPPASAQSPS-STSPSSISPSPSTPS 222
S APS +PAH+ S PA+ +SPS S+SP+ SP+TPS
Sbjct: 256 SPAHAPSHSPAHSPSHSPATPKSPSPSSSPAQ---SPATPS 293
>gi|12643589|sp||HUNB_DROMM_1 [Segment 1 of 2] HUNCHBACK PROTEIN
>gi|12643604|sp||HUNB_DROSO_1 [Segment 1 of 2] HUNCHBACK PROTEIN
>gi|2896866|gb|AAC03260.1| (U93013) hunchback protein [Drosophila
mimica] >gi|2896891|gb|AAC03270.1| (U93023) hunchback protein
[Drosophila soonae]
Length = 64
Frame 2 hits (HSPs): ____________________________________________
__________________________________________________
Database sequence: | | | | | 64
0 20 40 60
Plus Strand HSPs:
Score = 72 (25.3 bits), Expect = 0.34, P = 0.29
Identities = 20/64 (31%), Positives = 28/64 (43%), Frame = +2
Query: 92 WWQS---PQVKPPPLHPHTQFHHRLQVPKAHLPHHHHQYLRRHQPRATPSFMEPPPWPSL 262
W+ S +K P+ H HH H H HHQ+ +RH + S P P+L
Sbjct: 1 WYSSMFAANIKQEPISHHNHHHHH------H--HGHHQHQQRHNSNSNASSPHQSPLPNL 52
Query: 263 YHSLQAY 283
L+ Y
Sbjct: 53 --QLEQY 57
>gi|2135764|pir||I53641 mucin 5AC - human (fragment) >gi|945219|gb|AAC41774.1|
(L46721) mucin [Homo sapiens]
Length = 164
Frame 1 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | 164
0 50 100 150
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 0.37, P = 0.31
Identities = 25/84 (29%), Positives = 45/84 (53%), Frame = +1
Query: 19 SVIIINPRGMALTRAMLMLATSLALVAISA-----GQAPSPAPAHTVSSPPASAQSPSST 183
SV+ P + T ++ +L TS + ++ G PSP P + +S P ++ + + T
Sbjct: 1 SVLGTTPSPVPTTSSISVLTTSTTSASTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSAPT 60
Query: 184 SPSSISPSPSTPSNAFLHGTTTLALT 261
+ ++ +P+ STPS +TTLA T
Sbjct: 61 TSTTSAPTTSTPSAPTT--STTLAPT 84
Score = 79 (27.8 bits), Expect = 2.9, P = 0.95
Identities = 24/91 (26%), Positives = 44/91 (48%), Frame = +1
Query: 19 SVIIINPRGMALTRAMLMLATSLALVAISA-----GQAPSPAPAHTVSSPPASAQSPSST 183
SV+ P + T ++ +L TS + ++ G PSP P + +S P ++ + + T
Sbjct: 1 SVLGTTPSPVPTTSSISVLTTSTTSASTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSAPT 60
Query: 184 SPSSISPSPSTPSNAFLHGT---TTLALTLP 267
+ ++ +P+ STPS T TT + P
Sbjct: 61 TSTTSAPTTSTPSAPTTSTTLAPTTSTTSAP 91
>gi|12739458 ref|XP_012500.1| hypothetical protein FLJ20718 [Homo sapiens]
Length = 384
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | 384
0 150 300
Plus Strand HSPs:
Score = 92 (32.4 bits), Expect = 0.38, P = 0.32
Identities = 30/89 (33%), Positives = 42/89 (47%), Frame = +3
Query: 51 SDTCHAHASHVLSS-GGNLRRSSPLPCTR-THSFITACKCPKPIFHITIINISVAINPEQ 224
SD A + S GG L SPL + H+ +T PK IF T S+A++
Sbjct: 94 SDESDAFMENSFSECGGQL--FSPLCLSHEVHTALTNYLIPKKIFEKTAFPNSIAVDLCS 151
Query: 225 RLPSWNHHLGPHSTTLCRLTSCLKPISILLD 317
R P+W + +T CR CL+ + LLD
Sbjct: 152 RNPTWKPLIRKMNTIQCRALFCLQSLVSLLD 182
>gi|106688|pir||S24709 Ig alpha chain - human >gi|28566|emb|CAA78683.1|
(Z14960) codes for truncated alpha heavy Ig mRNA of alpha heavy
chain disease patient AYO [Homo sapiens]
Length = 77
Frame 1 hits (HSPs): ________________________________________
Annotated Domains: ____________________
__________________________________________________
Database sequence: | | | | | 77
0 20 40 60
__________________
Annotated Domains:
DOMO DM04904: 41..70
__________________
Plus Strand HSPs:
Score = 71 (25.0 bits), Expect = 0.44, P = 0.36
Identities = 18/56 (32%), Positives = 30/56 (53%), Frame = +1
Query: 70 MLATSLALVAISAGQAPS------PAPAHTVSSPPASAQSPSSTSPSSISPSPSTP 219
+L + A+ A++ G+ P P TVSS P++ +PS ++P + SPS P
Sbjct: 13 LLKDTAAIAAVTTGRGPETTSTRGPETTGTVSSVPSTPPTPSPSTPPTPSPSCCHP 68
Score = 61 (21.5 bits), Expect = 6.2, P = 1.0
Identities = 21/61 (34%), Positives = 33/61 (54%), Frame = +1
Query: 70 MLATSLALVAISAGQAPS------PAPAHTVSSPPASAQSPSSTSPSSISPSPSTPSNAF 231
+L + A+ A++ G+ P P TVSS P++ +PS PS+ P TPS +
Sbjct: 13 LLKDTAAIAAVTTGRGPETTSTRGPETTGTVSSVPSTPPTPS---PST----PPTPSPSC 65
Query: 232 LHGTTTL 252
H +L
Sbjct: 66 CHPRLSL 72
>gi|3883120|gb|AAC77823.1| (AF082298) arabinogalactan-protein [Arabidopsis
thaliana] >gi|9759407|dbj|BAB09862.1| (AB008268)
arabinogalactan-protein [Arabidopsis thaliana]
Length = 131
Frame 1 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | 131
0 50 100
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 0.45, P = 0.36
Identities = 20/64 (31%), Positives = 39/64 (60%), Frame = +1
Query: 46 MALTRAMLMLATSLALVAISAGQAPSPAPAHTVSSPPASAQSPSS-TSPS---SISPSPS 213
MA +++++ + + L++ + Q+P+PAP++ + A SP T+P+ +SPSPS
Sbjct: 1 MAFSKSLVFVLLAALLISSAVAQSPAPAPSNVGGRRISPAPSPKKMTAPAPAPEVSPSPS 60
Query: 214 TPSNA 228
P+ A
Sbjct: 61 -PAAA 64
>gi|11875764|gb|AAG40770.1| (AF303002) neurogenin 2 [Homo sapiens]
Length = 250
Frame 1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | 250
0 50 100 150 200
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 0.45, P = 0.36
Identities = 22/64 (34%), Positives = 38/64 (59%), Frame = +1
Query: 43 GMALTRAMLMLATSLALVAISAGQAPSPAPAHT-VSSP-PASAQSPSSTSPSSISPSPST 216
G + A+L+ + S+G +PSPA + +SP P+S+ S +STSP S + SP++
Sbjct: 161 GALFSEAVLLSPGGASAALSSSGDSPSPASTWSCTNSPAPSSSVSSNSTSPYSCTLSPAS 220
Query: 217 PSNA 228
P+ +
Sbjct: 221 PAGS 224
>gi|542078|pir||JT0754 extensin-like protein - potato >gi|629719|pir||S33209
extensin-like protein precursor - potato >gi|296401|emb|CAA79930.1|
(Z21937) extensin [Solanum tuberosum]
Length = 291
Frame 2 hits (HSPs): ____________________
Annotated Domains: _____
__________________________________________________
Database sequence: | | | | | | | 291
0 50 100 150 200 250
__________________
Annotated Domains:
Entrez domain: signal sequence 1..26
__________________
Plus Strand HSPs:
Score = 90 (31.7 bits), Expect = 0.45, P = 0.36
Identities = 23/58 (39%), Positives = 29/58 (50%), Frame = +2
Query: 77 PRP*LWWQSPQVKPPPLHPHTQFHHRLQVPKAHLPHHHHQYLRRHQPRATPSFMEPPP 250
P P ++SP PPP PH H V K+ PHHHH + + P TP + PPP
Sbjct: 95 PPPTPVYKSP---PPPKTPHYPPH--TPVYKSPPPHHHHP-VYKFPPPPTPVYKSPPP 146
Score = 82 (28.9 bits), Expect = 4.2, P = 0.98
Identities = 19/51 (37%), Positives = 24/51 (47%), Frame = +2
Query: 116 PPPLHPHTQFHHRLQVPKAHLPHHHHQYLRR-------HQPRATPSFMEPPP 250
PPP+H + H V K+ PHHHH + H P TP + PPP
Sbjct: 34 PPPVHVYPSPPHH-PVYKSPPPHHHHPVYKSPPPSEKPHYPPHTPVYKSPPP 84
Score = 82 (28.9 bits), Expect = 4.2, P = 0.98
Identities = 21/51 (41%), Positives = 25/51 (49%), Frame = +2
Query: 116 PPPLH-PHTQFHHRLQVPKAHLPHHHHQYLRRHQPRATPSFMEPPPWPSLYH 268
PPP PH H V K+ PHHHH + + P TP + PPP P H
Sbjct: 64 PPPSEKPHYPPH--TPVYKSPPPHHHHP-VYKSPPPPTPVYKSPPP-PKTPH 111
>gi|10435826|dbj|BAB14678.1| (AK023787) unnamed protein product [Homo sapiens]
Length = 858
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | | 858
0 150 300 450 600 750
Plus Strand HSPs:
Score = 95 (33.4 bits), Expect = 0.48, P = 0.38
Identities = 21/54 (38%), Positives = 31/54 (57%), Frame = +1
Query: 106 AGQAPSPAPAHTVSSPPAS-AQSPSSTSPSSISPSPSTPSNAFLHGTTTLALTL 264
A + P P+PAH+ P S A PS ++ S+SP+PS P+ A H LA+ +
Sbjct: 360 APRTPHPSPAHSSRKPLTSPAPDPSESTVQSLSPTPSPPTPAPQHSDLCLAMAV 413
>gi|559557|gb|AAA51649.1| (U14009) arabinogalactan-protein [Pyrus communis]
Length = 145
Frame 1 hits (HSPs): ____________________ ____________________
__________________________________________________
Database sequence: | | | | 145
0 50 100
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 0.58, P = 0.44
Identities = 26/58 (44%), Positives = 37/58 (63%), Frame = +1
Query: 118 PSPAPAHTVSSPPASAQSPSSTS-PSSISPSPSTPSNAFLHGTTTLALTLPLFAGLLLA 291
PS PA T +S PA A+SPSS++ PS SP+ S P++A + + T A++ AG LA
Sbjct: 81 PSSTPASTPASTPA-AKSPSSSAAPSGSSPN-SPPADA-IPPSGTSAISRVAIAGTALA 136
Score = 79 (27.8 bits), Expect = 1.9, P = 0.86
Identities = 24/60 (40%), Positives = 37/60 (61%), Frame = +1
Query: 43 GMALTRAMLMLATSLALVAISAGQAPSPAPAHTVSSPPASAQSPSSTSPSSIS-PSPS-T 216
G + + +LATS +A + G AP+ +P T SP A+ P++T PS++ PSPS T
Sbjct: 7 GFQVLMVLGLLATSC--IAQAPGAAPTASPP-TAKSPTATP--PTATPPSAVPVPSPSKT 61
Query: 217 PS 222
P+
Sbjct: 62 PT 63
>gi|974047|gb|AAB01401.1| (L39250) glycoprotein B [Mouse cytomegalovirus 1]
Length = 80
Frame 1 hits (HSPs): ______________________________________
__________________________________________________
Database sequence: | | | | | 80
0 20 40 60
Plus Strand HSPs:
Score = 70 (24.6 bits), Expect = 0.58, P = 0.44
Identities = 21/61 (34%), Positives = 37/61 (60%), Frame = +1
Query: 46 MALTRAMLMLATSLALVAISAGQAPSPAPAHTVSSPP-ASAQSPSSTSPSSISPSPSTPS 222
+A+T L++ TS + A AG A + A T +SP ASA++ ++TS ++ + +TP+
Sbjct: 21 LAVTIWCLLVCTSEVVAA--AGSAGTTPKAKTNTSPETASAETETATSGAATAKKEATPT 78
Query: 223 NA 228
A
Sbjct: 79 QA 80
>gi|9294050|dbj|BAB02007.1| (AB020746) protein kinase-like protein [Arabidopsis
thaliana]
Length = 652
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 652
0 150 300 450 600
Plus Strand HSPs:
Score = 93 (32.7 bits), Expect = 0.59, P = 0.45
Identities = 22/50 (44%), Positives = 30/50 (60%), Frame = +1
Query: 97 AISAGQAPSPAP------AHTVSSPPASAQSPSSTSPSSISPSPSTPSNA 228
A S G PSP+P + T + PPA++ P +T+PSS PSPST S +
Sbjct: 4 APSPGTTPSPSPPSPPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTS 53
>gi|11436195 ref|XP_003468.1| NK homeobox (Drosophila), family 6, A [Homo
sapiens]
Length = 327
Frame 2 hits (HSPs): ____ __
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | 327
0 150 300
Plus Strand HSPs:
Score = 81 (28.5 bits), Expect = 0.62, Sum P(2) = 0.46
Identities = 22/55 (40%), Positives = 28/55 (50%), Frame = +1
Query: 55 TRAMLMLATSLALVAISAGQAPSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTP 219
TR L +S L A+ + A P + + PP A PSS+S SS S SPS P
Sbjct: 10 TRQSAFLLSSPPLAALHS-MAEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSPP 63
Score = 43 (15.1 bits), Expect = 0.62, Sum P(2) = 0.46
Identities = 11/22 (50%), Positives = 12/22 (54%), Frame = +2
Query: 215 PRATPSFMEPPPWPSLYHSLQA 280
PR + S PPP P LY S A
Sbjct: 161 PRFS-SLSPPPPPPGLYFSPSA 181
Score = 37 (13.0 bits), Expect = 2.5, Sum P(2) = 0.92
Identities = 5/9 (55%), Positives = 6/9 (66%), Frame = +2
Query: 227 PSFMEPPPW 253
P M+ PPW
Sbjct: 206 PGVMQSPPW 214
>gi|114929|sp|P28659|BF41_MOUSE BRAIN PROTEIN F41 >gi|109870|pir||S16865 gene
F41 protein - mouse >gi|50942|emb|CAA43691.1| (X61451) F41 [Mus
musculus]
Length = 257
Frame 1 hits (HSPs): ___________________
Annotated Domains: ______________ _______________
__________________________________________________
Database sequence: | | | | | | | 257
0 50 100 150 200 250
__________________
Annotated Domains:
DOMO DM00012: RIBONUCLEOPROTEINREPEAT 1..59
PRODOM PD186230: 1..20
PRODOM PD003790: SXL(4) HUD(3) Q9Z187(2) 22..69
PRODOM PD012285: 183..254
__________________
Plus Strand HSPs:
Score = 88 (31.0 bits), Expect = 0.63, P = 0.47
Identities = 31/93 (33%), Positives = 46/93 (49%), Frame = +1
Query: 13 LSSVIIINPRGMALTRAMLMLATSLALVAISAGQAPSPAPAHTVSSPP-----ASAQSPS 177
L+++ ++P G L L +LA A +A PS A T SS P +S SPS
Sbjct: 118 LNTLSSLHPMG-GLNAMQLQNLAALAAAASAAQNTPSGTNALTTSSSPLSVLTSSGSSPS 176
Query: 178 STSPSSISPSPSTPSNAFLHGTTTLALTLPLFAGL 282
S+S +S++P S + L G T L + AG+
Sbjct: 177 SSSSNSVNPIASLGALQTLAGATA-GLNVGSLAGM 210
>gi|119711|sp|P06599|EXTN_DAUCA EXTENSIN PRECURSOR >gi|82047|pir||A24354
extensin precursor - carrot >gi|18343|emb|CAA26632.1| (X02873) put.
precursor [Daucus carota] >gi|224686|prf||1111211A extensin [Daucus
carota]
Length = 306
Frame 2 hits (HSPs): ____________
Annotated Domains: ____________________________ ______________
__________________________________________________
Database sequence: | | | | | | | | 306
0 50 100 150 200 250 300
__________________
Annotated Domains:
PRODOM PD000540: H1(18) O76786(11) TONB(10) 39..154
PRODOM PD192510: EXTN_DAUCA 156..177
PRODOM PD026262: EXTN(1) Q09083(1) 179..206
PRODOM PD000540: H1(18) O76786(11) TONB(10) 227..302
__________________
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 0.65, P = 0.48
Identities = 23/67 (34%), Positives = 34/67 (50%), Frame = +2
Query: 77 PRP*LWWQSPQVKPPPLH-PHTQFHHRLQVPKA--HLP--HHHHQYLRRHQPRATP--SF 235
P P ++SP PPP H P + H++ + P H P HH++Y + P TP +
Sbjct: 137 PTPVYKYKSP---PPPKHSPAPEHHYKYKSPPPPKHFPAPEHHYKYKYKSPPPPTPVYKY 193
Query: 236 MEPPPWPSLY 265
PPP +Y
Sbjct: 194 KSPPPPTPVY 203
>gi|8923645 ref|NP_060409.1| hypothetical protein FLJ20718 [Homo sapiens]
>gi|7020991|dbj|BAA91342.1| (AK000725) unnamed protein product
[Homo sapiens]
Length = 594
Frame 3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | 594
0 150 300 450
Plus Strand HSPs:
Score = 92 (32.4 bits), Expect = 0.70, P = 0.50
Identities = 30/89 (33%), Positives = 42/89 (47%), Frame = +3
Query: 51 SDTCHAHASHVLSS-GGNLRRSSPLPCTR-THSFITACKCPKPIFHITIINISVAINPEQ 224
SD A + S GG L SPL + H+ +T PK IF T S+A++
Sbjct: 304 SDESDAFMENSFSECGGQL--FSPLCLSHEVHTALTNYLIPKKIFEKTAFPNSIAVDLCS 361
Query: 225 RLPSWNHHLGPHSTTLCRLTSCLKPISILLD 317
R P+W + +T CR CL+ + LLD
Sbjct: 362 RNPTWKPLIRKMNTIQCRALFCLQSLVSLLD 392
>gi|123528|sp|P14586|HRP3_PLAFS HISTIDINE-RICH PROTEIN >gi|84223|pir||A29653
histidine-rich protein - malaria parasite (Plasmodium falciparum)
>gi|160341|gb|AAA29619.1| (M17028) histidine rich protein B
[Plasmodium falciparum]
Length = 82
Frame 2 hits (HSPs): __________________
Annotated Domains: __________________________
__________________________________________________
Database sequence: | | | | | | 82
0 20 40 60 80
__________________
Annotated Domains:
PRODOM PD049350: HRP3_PLAFS 39..81
__________________
Plus Strand HSPs:
Score = 69 (24.3 bits), Expect = 0.76, P = 0.53
Identities = 12/29 (41%), Positives = 15/29 (51%), Frame = +2
Query: 128 HPHTQFHHRLQVPKAHLPHHHHQYLRRHQ 214
H H +H L H HHHH++ RHQ
Sbjct: 11 HRHHHLNHHLYHRHHHHRHHHHRHHHRHQ 39
>gi|2058664|gb|AAB53317.1| (U91519) brachyury [Sus scrofa]
Length = 92
Frame 2 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | | | 92
0 20 40 60 80
Plus Strand HSPs:
Score = 69 (24.3 bits), Expect = 0.76, P = 0.53
Identities = 18/49 (36%), Positives = 21/49 (42%), Frame = +2
Query: 92 W-WQSPQVKP--PPLHPHTQFHHRLQVPKAHLPHHHHQYLRRHQPRATPS 232
W W P PP PH QF L +P H + LR H+P PS
Sbjct: 35 WGWLIPGTSTLCPPATPHPQFGGPLSLPSTH-GCERYPALRNHRPAPYPS 83
>gi|7488206|pir||T05264 probable serine/threonine-specific protein kinase (EC
2.7.1.-) T4L20.20 - Arabidopsis thaliana
>gi|3641836|emb|CAA18823.1| (AL023094) putative serine/threonine
protein kinase [Arabidopsis thaliana] >gi|7270394|emb|CAB80161.1|
(AL161585) putative serine/threonine protein kinase [Arabidopsis
thaliana]
Length = 674
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 674
0 150 300 450 600
Plus Strand HSPs:
Score = 92 (32.4 bits), Expect = 0.84, P = 0.57
Identities = 21/42 (50%), Positives = 25/42 (59%), Frame = +1
Query: 100 ISAGQAPSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTPSN 225
ISA +P PAP +SPP S PSS+ P +PSP TP N
Sbjct: 51 ISASFSPPPAPPTQETSPPTS---PSSSPPVVANPSPQTPEN 89
>gi|5453788 ref|NP_006159.1| NK homeobox (Drosophila), family 6, A; NK homeo
box, family 6, member A; Nkx6.1 [Homo sapiens]
>gi|6016211|sp|P78426|HK61_HUMAN HOMEOBOX PROTEIN NKX-6.1
>gi|1894911|gb|AAD11962.1| (U66799) NK homeobox protein [Homo
sapiens]
Length = 367
Frame 2 hits (HSPs): ____ ___
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 367
0 150 300
Plus Strand HSPs:
Score = 81 (28.5 bits), Expect = 0.86, Sum P(2) = 0.58
Identities = 22/55 (40%), Positives = 28/55 (50%), Frame = +1
Query: 55 TRAMLMLATSLALVAISAGQAPSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTP 219
TR L +S L A+ + A P + + PP A PSS+S SS S SPS P
Sbjct: 10 TRQSAFLLSSPPLAALHS-MAEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSPP 63
Score = 43 (15.1 bits), Expect = 0.86, Sum P(2) = 0.58
Identities = 11/22 (50%), Positives = 12/22 (54%), Frame = +2
Query: 215 PRATPSFMEPPPWPSLYHSLQA 280
PR + S PPP P LY S A
Sbjct: 161 PRFS-SLSPPPPPPGLYFSPSA 181
Score = 37 (13.0 bits), Expect = 3.4, Sum P(2) = 0.97
Identities = 5/9 (55%), Positives = 6/9 (66%), Frame = +2
Query: 227 PSFMEPPPW 253
P M+ PPW
Sbjct: 206 PGVMQSPPW 214
>gi|7473310|pir||D75404 phosphatidylglycerophosphatase B-related protein -
Deinococcus radiodurans (strain R1)
>gi|6459110|gb|AAF10927.1|AE001982_1 (AE001982)
phosphatidylglycerophosphatase B-related protein [Deinococcus
radiodurans]
Length = 260
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | | 260
0 50 100 150 200 250
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.87, P = 0.58
Identities = 19/47 (40%), Positives = 28/47 (59%), Frame = +1
Query: 154 PASAQSPSSTSPSSISPSPSTPSNAFL--HGTTTLALTLPLFAGLLL 288
PA+ P+S+ P+ +SP+P+ P + HG T L L L + A LLL
Sbjct: 2 PAAPTPPTSSPPNPVSPAPTPPPQHIIRQHGRTVLLLLLAVLAPLLL 48
>gi|6630459|gb|AAF19547.1|AC007190_15 (AC007190) F23N19.12 [Arabidopsis
thaliana]
Length = 312
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | | | | 312
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 88 (31.0 bits), Expect = 0.88, P = 0.58
Identities = 23/52 (44%), Positives = 33/52 (63%), Frame = +1
Query: 79 TSLALVAISAGQAPSPAPAHTVSSPPASAQSPSSTSPSSISPS---PSTPSNA 228
+S L ++S +PSP P+ + SS P S+ SPSS P S+SPS P PS++
Sbjct: 74 SSSPLSSLSPSLSPSP-PSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSS 125
Score = 86 (30.3 bits), Expect = 1.6, P = 0.79
Identities = 23/53 (43%), Positives = 34/53 (64%), Frame = +1
Query: 76 ATSLALVAISAGQAPSPAPAHTVSSPPASAQSPSSTSPSSISPS---PSTPSNA 228
++SL+ + S +PSP P+ + SS P S+ SPSS P S+SPS P PS++
Sbjct: 24 SSSLSPSSSSPSLSPSP-PSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSS 76
Score = 82 (28.9 bits), Expect = 4.7, P = 0.99
Identities = 21/51 (41%), Positives = 28/51 (54%), Frame = +1
Query: 67 LMLATSLALVAISAGQAPSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTP 219
L +A L + S+ +PS + SPP+S SPSS PSS+SPS P
Sbjct: 12 LSIAILLFITTSSSSLSPSSSSPSLSPSPPSS--SPSSAPPSSLSPSSPPP 60
>gi|8671871|gb|AAF78434.1|AC018748_13 (AC018748) Contains similarity to swi4
protein from Schizosaccharomyces pombe gi|1076927. [Arabidopsis
thaliana] >gi|12324020|gb|AAG51969.1|AC024260_7 (AC024260)
hypothetical protein; 86225-87277 [Arabidopsis thaliana]
Length = 153
Frame 2 hits (HSPs): __________________________________________
__________________________________________________
Database sequence: | | | | | 153
0 50 100 150
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 0.96, P = 0.62
Identities = 33/125 (26%), Positives = 53/125 (42%), Frame = +2
Query: 95 WQSPQVKPPPLHPHTQFHHR-LQVPKAH----LPHHH---HQYLRRHQPRATPSFMEPPP 250
+Q PPP +PH HH + +P+ PHH HQY++ HQ A +
Sbjct: 19 FQGVPTYPPPSYPHPPSHHPVIGIPQPSPPPGSPHHDISVHQYIQEHQTVA--GYPVSQG 76
Query: 251 WPSLYHSLQAYFLLKAYFNFIRFTFIFAFP-YLSHSLLY-----EHAFACILLCTTSPVI 412
P+ + L L +F FI + A P Y+ +L + CT + V+
Sbjct: 77 RPARQNRLPCCGLGLGWFLFIIGFLLGAIPWYVGVFILVCARIDPREKPGYVACTIAAVV 136
Query: 413 SHVTVAF 433
+ +T+ F
Sbjct: 137 ATITIVF 143
>gi|100213|pir||S14972 extensin class I (clone w6) - tomato
>gi|1345536|emb|CAA39214.1| (X55683) extensin (class I)
[Lycopersicon esculentum]
Length = 90
Frame 1 hits (HSPs): ________________________________________
Annotated Domains: _______________________________________________
__________________________________________________
Database sequence: | | | | | | 90
0 20 40 60 80
__________________
Annotated Domains:
DOMO DM00215: PROLINE-RICHPROTEIN3 7..90
__________________
Plus Strand HSPs:
Score = 68 (23.9 bits), Expect = 0.98, P = 0.62
Identities = 16/39 (41%), Positives = 19/39 (48%), Frame = +1
Query: 115 APSPAPAHTVSSPPASAQSPSST----SPSSISPSPSTP 219
+PSP P + SPP + SP SP SPSP P
Sbjct: 35 SPSPPPPYVYKSPPPPSHSPPPPYYYKSPPPPSPSPPPP 73
Score = 67 (23.6 bits), Expect = 1.3, P = 0.72
Identities = 16/39 (41%), Positives = 19/39 (48%), Frame = +1
Query: 115 APSPAPAHTVSSPPASAQSPSST----SPSSISPSPSTP 219
+PSP P + SPP + SP SP SPSP P
Sbjct: 3 SPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPP 41
Score = 64 (22.5 bits), Expect = 8.5, P = 1.0
Identities = 14/38 (36%), Positives = 20/38 (52%), Frame = +1
Query: 115 APSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTPSNA 228
+PSP P + SPP + SP P + SP PS++
Sbjct: 19 SPSPPPPYVYKSPPPPSPSPP---PPYVYKSPPPPSHS 53
>gi|78113|pir||S04157 outer membrane protein H.8 precursor - Neisseria
gonorrhoeae >gi|288431|emb|CAA32869.1| (X14739) H.8 [Neisseria
gonorrhoeae]
Length = 93
Frame 1 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | | 93
0 20 40 60 80
Plus Strand HSPs:
Score = 68 (23.9 bits), Expect = 0.98, P = 0.62
Identities = 17/47 (36%), Positives = 30/47 (63%), Frame = +1
Query: 82 SLALVAISAGQAPSPAPAHTVSSPPA-SAQSPSSTSPSSISPSPSTPS 222
SLAL A G+ + APA SS A +A++P++ +P++ +P+ P+
Sbjct: 12 SLALAACG-GEKAAEAPAAEASSTEAPAAEAPAAEAPAAEAPAAEAPA 58
>gi|1082603|pir||S53365 mucin 5AC (clone CEL2) - human (fragment)
>gi|563373|emb|CAA84030.1| (Z34276) mucin [Homo sapiens]
Length = 94
Frame 1 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | 94
0 20 40 60 80
Plus Strand HSPs:
Score = 68 (23.9 bits), Expect = 0.98, P = 0.62
Identities = 16/37 (43%), Positives = 21/37 (56%), Frame = +1
Query: 109 GQAPSPAPA-HTVSSPPASAQSPSSTSPSSISPSPST 216
G PSP P T+S P S S S+TS +S S + +T
Sbjct: 25 GTTPSPVPTTSTISVPTTSTTSASTTSTTSASTTSTT 61
>gi|974005|gb|AAB01384.1| (L39251) glycoprotein B [Mouse cytomegalovirus 1]
Length = 80
Frame 1 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | | 80
0 20 40 60
Plus Strand HSPs:
Score = 68 (23.9 bits), Expect = 0.98, P = 0.62
Identities = 21/62 (33%), Positives = 36/62 (58%), Frame = +1
Query: 43 GMALTRAMLMLATSLALVAISAGQAPSPAPAHTVSSPP-ASAQSPSSTSPSSISPSPSTP 219
G+A+T L+ TS ++A +A + +P A T +SP ASA + ++TS + +TP
Sbjct: 20 GLAVTIWCLLACTS-EVIAAAAAEGTTPK-ARTGTSPETASAGTETATSGARTEKKEATP 77
Query: 220 SNA 228
+ A
Sbjct: 78 TQA 80
>gi|11250058|pir||T49222 stellacyanin (uclacyanin 3)-like protein - Arabidopsis
thaliana >gi|7576203|emb|CAB87864.1| (AL163852) stellacyanin
(uclacyanin 3)-like protein [Arabidopsis thaliana]
Length = 187
Frame 1 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | 187
0 50 100 150
Plus Strand HSPs:
Score = 84 (29.6 bits), Expect = 1.0, P = 0.64
Identities = 26/61 (42%), Positives = 32/61 (52%), Frame = +1
Query: 46 MALTRAMLMLATSLALVAISAGQAPSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTPSN 225
+ LT L LA V + A + P P+ + SP SA SPS PS+ SPSPS P N
Sbjct: 103 LCLTPGHCSLGMKLA-VQVLAAVSLEPPPSPSAPSPSPSAPSPS---PSAPSPSPS-PGN 157
Query: 226 A 228
A
Sbjct: 158 A 158
Score = 82 (28.9 bits), Expect = 1.8, P = 0.83
Identities = 29/84 (34%), Positives = 41/84 (48%), Frame = +1
Query: 46 MALTRAMLMLATSLALVAISAGQAPSPAPAHTVSSPPASAQSPSSTSPSSISPSPSTPSN 225
+ LT L LA V + A + P P+ + SP SA SPS ++PS SPSP N
Sbjct: 103 LCLTPGHCSLGMKLA-VQVLAAVSLEPPPSPSAPSPSPSAPSPSPSAPSP-SPSPGNAEN 160
Query: 226 ---AFLHGTTT---LALTLPLFAGLL 285
A G + + +T+ L G+L
Sbjct: 161 LKNAASKGIMSYGKIVVTMVLMYGVL 186
>gi|7291634|gb|AAF47057.1| (AE003461) CG11300 gene product [Drosophila
melanogaster]
Length = 157
Frame 1 hits (HSPs): ________________________________
__________________________________________________
Database sequence: | | | | | 157
0 50 100 150
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 1.1, P = 0.65
Identities = 19/54 (35%), Positives = 33/54 (61%), Frame = +1
Query: 64 MLMLATSLALVAISAGQAP-SPAPAHTVSSPPASAQSPSSTSPSSISPSPSTPS 222
+ ++AT+ A +AG P S PA T +SPP + +P S SP++ +P ++P+
Sbjct: 12 LALIATAYADSPPAAGSPPASSPPAGTPTSPPPATGTPPSPSPATGTPPSASPA 65
Score = 77 (27.1 bits), Expect = 4.7, P = 0.99
Identities = 24/60 (40%), Positives = 37/60 (61%), Frame = +1
Query: 103 SAGQAPSPAPAHTVSSPPAS--AQSPSSTSPSSISPS-PSTPSNAFLHGTTTLALTLPLF 273
+ G PSP+PA T + P AS A +P+S +P++ +PS P+TP +A T+ T P
Sbjct: 45 ATGTPPSPSPA-TGTPPSASPAAGTPTSPTPATGTPSSPATP-DAPASSTSPATPTSPSD 102
Query: 274 AG 279
+G
Sbjct: 103 SG 104
Score = 75 (26.4 bits), Expect = 8.5, P = 1.0
Identities = 20/44 (45%), Positives = 27/44 (61%), Frame = +1
Query: 103 SAGQAPSPAPAHTVSSPPASAQSP-SSTSPSS-ISPSPSTPSNA 228
+AG SP PA S PA+ +P SSTSP++ SPS S S++
Sbjct: 65 AAGTPTSPTPATGTPSSPATPDAPASSTSPATPTSPSDSGSSSS 108
>gi|1351865|sp|P48038|ACRO_RABIT ACROSIN PRECURSOR >gi|1085468|pir||S47538
acrosin (EC 3.4.21.10) precursor - rabbit >gi|451842|gb|AAA61630.1|
(U05204) preproacrosin [Oryctolagus cuniculus]
>gi|1090525|prf||2019255A prepro-acrosin [Oryctolagus cuniculus]
Length = 431
Frame 2 hits (HSPs): _______
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 431
0 150 300
__________________
Annotated Domains:
BLOCKS BL00134A: Serine proteases, trypsin fami 71..87
BLOCKS BL00134B: Serine proteases, trypsin fami 232..255
BLOCKS BL00134C: Serine proteases, trypsin fami 270..283
DOMO DM03776: ACROSIN 1..37
DOMO DM00018: TRYPSIN 39..286
DOMO DM03631: ACROSIN 288..430
Entrez glycosylation site: POTENTIAL. 19
Entrez glycosylation site: POTENTIAL. 208
Entrez active site: CHARGE RELAY SYSTEM (BY SIM 86
Entrez active site: CHARGE RELAY SYSTEM (BY SIM 140
Entrez active site: CHARGE RELAY SYSTEM (BY SIM 238
PFAM trypsin: Trypsin 40..283
PRINTS CHYMOTRYPSIN1: Chymotrypsin family motif 72..87
PRINTS CHYMOTRYPSIN2: Chymotrypsin family motif 136..150
PRINTS CHYMOTRYPSIN3: Chymotrypsin family motif 231..243
PRODOM PD000046: TRYP(11) TRY1(8) MCT1(8) 26..161
PRODOM PD000075: TRYP(11) TRY1(8) MCT1(8) 171..234
PRODOM PD000068: TRYP(11) TRY1(8) MCT1(8) 236..282
PRODOM PD000540: H1(18) O76786(11) TONB(10) 298..385
PRODOM PD026809: ACRO(1) Q28609(1) 391..430
PROSITE TRYPSIN_HIS: Serine proteases, trypsin f 82..87
PROSITE TRYPSIN_SER: Serine proteases, trypsin f 232..243
__________________
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 1.1, P = 0.66
Identities = 23/54 (42%), Positives = 27/54 (50%), Frame = +2
Query: 98 QSPQV-KPPPLHPHTQFHHRLQVPKAHLPHHH-HQYLRRHQPRATPSFMEPPPWP 256
+SP V +PP HP F H P H PH H H + R QP A + PPP P
Sbjct: 306 RSPGVHQPPSAHPPWYFQHASGPPHPH-PHPHPHPHPRPPQPPAAQAPPPPPPPP 359
WARNING: HSPs involving 147 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.99
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.337 0.145 0.506
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.337 0.145 0.528
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.355 0.154 0.511
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.361 0.159 0.594
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.363 0.161 0.646
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.369 0.169 0.597
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 163 162 10. 75 3 12 22 0.10 34
30 0.10 37
+2 0 164 163 10. 75 3 12 22 0.10 34
30 0.10 37
+1 0 164 163 10. 75 3 12 22 0.10 34
30 0.10 37
-1 0 164 163 10. 75 3 12 22 0.10 34
30 0.10 37
-2 0 164 163 10. 75 3 12 22 0.10 34
30 0.10 37
-3 0 163 163 10. 75 3 12 22 0.10 34
30 0.10 37
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 197
No. of states in DFA: 591 (58 KB)
Total size of DFA: 199 KB (256 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 193.30u 1.11s 194.41t Elapsed: 00:00:35
Total cpu time: 193.38u 1.15s 194.53t Elapsed: 00:00:35
Start: Sat Feb 2 00:31:39 2002 End: Sat Feb 2 00:32:14 2002
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000