Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss259458	KWOK|OVLP-000621-100205		fwd/B	C/T	gggccagggccctccccaaatgatcaacca	gtagggccagctctcaggggaaatacacaa	06/30/00	10/10/03	79	Genomic			97 %
ss554457	SC_JCM|AC019114.4_85733		fwd/B	C/T	ggggccaggccctccccaaatgatcaacca	gtagggccagctctcaggggaaatacacaa	07/12/00	10/10/03	87	Genomic			unknown
ss1255036	KWOK|OVLP-000804-567530		fwd/B	C/T	gggccagggccctccccaaatgatcaacca	gtagggccagctctcaggggaaatacacaa	09/02/00	10/10/03	86	Genomic			97 %
ss1631519	KWOK|OVLP-000925-123647		fwd/B	C/T	gggccagggccctccccaaatgatcaacca	gtagggccagctctcaggggaaatacacaa	10/04/00	10/10/03	87	Genomic			97 %
ss10938244	BCM_SSAHASNP|chr19.NT_011255.13_4923214		rev/T	A/G	ttgtgtatttcccctgagagctggccctac	tggttgatcatttggggagggccctggccc	06/30/03	10/10/03	116	Genomic			unknown
ss17618525	CSHL-HAPMAP|CSHL-HuCC-200402.chr19.NT_011255.14_4923214		rev/T	A/G	ttgtgtatttcccctgagagctggccctac	tggttgatcatttggggagggccctggccc	02/19/04	03/04/04	120	Genomic			unknown
ss82991075	HGSV|Cor18956_SNV_20070510.chr19_4934214		rev/T	A/G	ttgtgtatttcccctgagagctggccctac	tggttgatcatttggggagggccctggccc	11/30/07	12/04/07	130	Genomic			unknown
ss85200007	HGSV|Cor19129_SNV_20070510.chr19_4934214		rev/T	A/G	ttgtgtatttcccctgagagctggccctac	tggttgatcatttggggagggccctggccc	12/06/07	12/08/07	130	Genomic			unknown
ss90888774	BCMHGSC_JDW|JWB-1138656		rev/T	A/G	ttgtgtatttcccctgagagctggccctac	tggttgatcatttggggagggccctggccc	02/26/08	03/01/08	129	Genomic			unknown

Fasta sequence   (Legend)

 ATGTCAGGTG TGTCTCATCT CTCCAGCCAG ACACCATCAG AGCCATAAGT CCTGCCTGGG
 ATAGGCGGGG GCAGGATTGG GAGGGTGGGA GGAAGGAGCG TGGGCCCTGG TCCACTAAGC
 ACCAGGACCC CATCTATAGC ACCAGGCTGG CATCACGCTC AGTGCATCCG GGGCCAGGGC
 CCTCCCCAAA TGATCAACCA
 Y
 GTAGGGCCAG CTCTCAGGGG AAATACACAA TGAATGTCAA AGACAGCACC CAAAAAAAAA
 AAAAAAAGAA Aagaaaaagc agtgtgaaac atctcaccaa cagttttgaa gatgatgatt
 acatgctgaa atgataaaac tgggggtata ctgggttcaa tacaatacac tgtaataatt
 aatttccccc atttctcttc accttttaac tcagctacca gaaaattcag acacacgggc
 ttgttctgca tcctcactgg acagcgctgC CTTAAAACAT ACATCACTTT TAggccaggt
 gcagtgactc acacctgtca tcccagcatt ttcagaggcc aaggcaggca gatcacgagg
 tcaggagttt gagaccagcc tggccaacac agtgaaactc tgtctctact aaaaatacaa
 aaattagctg ggtgtggtgg cacgcgcctg tagtcccagc tactcaggag gctgagacag
 gagaatcgct tgaacccggg aggtggaggt tgcagtgagc cgagatctcg ccactgcact
 ccagcctggt tgacacagtg agactccgcc acaaaaaaag aaagagagaa agagagagag
 agagagagag aACATCACTT TTGGTTATAC AGACAAGCCA TTAAAAACAT AGaaataaaa
 ataattttaa atttttttaa aaaaaGGAAA TACAACATTT TACATATACA TCCAGGTTTT
 CTTCTAGAGG Cttttttttt tttttttttt gagacggagt cttgctcttg tcacccaggc
 tggagcgcag tggtgcgatc ttggctcact gcaacctccg cctctcaggt tcaagagatt
 cttatacctc agcctcctga gtagctggga ttacaggcat gtgccactgc gtctggcttt
 tttttttttt ggagacagaa tctcactgtg ctgcccaggc tggagtacag tggtgcaatc
 ttggctcact gcagcctcca tctcccaggt tcaagcgatt ctcctgcctc agcctccaag
 tagctgggat tacaggcctg caccaacaca ccaggctaat tttgtgtatt ttttagtaga
 gacggggttt tgccatgttg gccaggctgg tctcaaactc ctgacctcag gtgatctgcc
 cacctcagcc tcccaaagtg ctgggatgac aggcatgagc cactgcacct ggctCTTCTA
 GAGGTTTTGT AATCGTTTTA GTAACATGTT CTCATCTCTG CTACATGTGG GGTTGGCTTC
 TGGCCATGGT GTGAGGCAGG GGTCCACCTT CACCACATGA CACTTGGTAG TGTTTAGTTA
 CGTGACCGCC CCCTGCCATG GGGTCTTCCC ATGTTCATCA GCAGCCCCTG GGGTACTGAT
 GGGGCACCCC AG

GeneView

Group Label	Contig->mRNA	Gene Model (contig mRNA transcript) Color Legend
reference	NT_011255->NM_015015 function
HuRef	NW_001838477->NM_015015 function
Celera	NW_927173->NM_015015 function

Integrated Maps:

NCBI Resource Links

Population Diversity

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
DoubleHit found by:  BCM_SSAHASNP	UNKNOWN	UNKNOWN	UNKNOWN