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UniSTS:42146 Links
WIAF-2547
Homo sapiens chromosome 3, locus IFT57
Macaca mulatta chromosome 2, locus IFT57
Pan troglodytes chromosome 3, locus IFT57

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:GAAGATAGATTCCCTATAAAATC
Reverse primer:GCTGACACAGTCCTTTAC
PCR product size:246 (bp), Homo sapiens

   Homo sapiens
Name: WIAF-2547
Also known as: A007H07
Polymorphism info:  

Cross References Help
Gene GeneID:55081
 Symbol:IFT57
 Description:intraflagellar transport 57 homolog (Chlamydomonas)
 Position:3q13.12
UniGeneHs.412196 Intraflagellar transport 57 homolog (Chlamydomonas)

Mapping InformationHelp
WIAF-2547 Sequence Map: Chr 3|HuRef Map Viewer
  Position: 105253983-105254228 (bp)
 
WIAF-2547 Sequence Map: Chr 3|Celera Map Viewer
  Position: 106277358-106277603 (bp)
 
WIAF-2547 Sequence Map: Chr 3 Map Viewer
  Position: 109363429-109363674 (bp)
 
A007H07 NCBI RH Map: Chr 3 Map Viewer
  Position: 869.3 (cR)
  Lod score: 1.41
 
A007H07 GeneMap99-GB4 Map: Chr 3 Map Viewer
  Position: 391.45 (cR3000)
  Lod score: 0.08
  Reference Interval: D3S1302-D3S1610

Electronic PCR results Help
RefSeq mRNA (1)
NM_018010.2 1708 .. 1953 (246 bp)  
 
mRNA (1)
AF139576.1 1708 .. 1953 (246 bp)  
 
Genomic (5 of 7)[Show All Hits]
AC012020.17 151371 .. 151616 (246 bp)  
CH003450.1 105542298 .. 105542543 (246 bp)  
CH003498.1 113638040 .. 113638285 (246 bp)  
CH471052.2 14463028 .. 14463273 (246 bp)  
CM000254.1 106277358 .. 106277603 (246 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (3)
AC019297.4 100205 .. 100450 (246 bp)  
AC019003.3 124 .. 369 (246 bp)  
AC130409.1 77241 .. 77486 (246 bp)  
 
ESTs (5 of 8)[Show All Hits]
T90992.1 45 .. 292 (248 bp)  
R96582.1 10 .. 255 (246 bp)  
R98620.1 44 .. 289 (246 bp)  
N34038.1 43 .. 287 (245 bp)  
N74401.1 43 .. 288 (246 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01036251.1 21382 .. 21627 (246 bp)  
AADC01032268.1 96020 .. 96265 (246 bp)  
AADB02004589.1 598204 .. 598449 (246 bp)  
ABBA01061707.1 133284 .. 133529 (246 bp)  
 

   Macaca mulatta
Name: WIAF-2547
Polymorphism info:  

Cross References Help
Gene GeneID:705088
 Symbol:IFT57
 Description:intraflagellar transport 57 homolog (Chlamydomonas)
 Position: 
UniGeneMmu.422 Similar to estrogen-related receptor beta like 1

Mapping InformationHelp
WIAF-2547 Sequence Map: Chr 2 Map Viewer
  Position: 28256855-28257101 (bp)

   Pan troglodytes
Name: WIAF-2547
Polymorphism info:  

Cross References Help
Gene GeneID:470877
 Symbol:IFT57
 Description:intraflagellar transport 57 homolog (Chlamydomonas)
 Position: 

Mapping InformationHelp
WIAF-2547 Sequence Map: Chr 3 Map Viewer
  Position: 112305601-112305846 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
XM_526260.2 1879 .. 2124 (246 bp)  
 
Genomic (1)
CM000317.1 112305601 .. 112305846 (246 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01050309.1 70999 .. 71244 (246 bp)  
AACZ02039061.1 102192 .. 102437 (246 bp)  
 

 

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