BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= PG1783
(336 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34541629|ref|NP_906108.1| thioredoxin family protein [Po... 685 0.0
gi|124007766|ref|ZP_01692468.1| thioredoxin family protein ... 82 5e-14
gi|86130916|ref|ZP_01049515.1| putative lipoprotein/thioder... 80 2e-13
gi|149371414|ref|ZP_01890900.1| thioredoxin family protein ... 80 2e-13
gi|60683073|ref|YP_213217.1| hypothetical protein BF3623 [B... 77 2e-12
gi|53715115|ref|YP_101107.1| hypothetical protein BF3831 [B... 77 2e-12
gi|29348731|ref|NP_812234.1| putative thioredoxin family pr... 77 2e-12
gi|150024382|ref|YP_001295208.1| hypothetical protein FP027... 76 4e-12
gi|86141051|ref|ZP_01059610.1| thioredoxin family protein [... 75 5e-12
gi|86133721|ref|ZP_01052303.1| possible thiol-disulfide oxi... 74 2e-11
gi|88801376|ref|ZP_01116904.1| hypothetical protein PI23P_0... 74 2e-11
gi|154491499|ref|ZP_02031125.1| hypothetical protein PARMER... 73 2e-11
gi|110638288|ref|YP_678497.1| thioredoxin family protein [C... 73 3e-11
gi|153807083|ref|ZP_01959751.1| hypothetical protein BACCAC... 69 3e-10
gi|146299009|ref|YP_001193600.1| alkyl hydroperoxide reduct... 69 6e-10
gi|88803108|ref|ZP_01118634.1| hypothetical protein PI23P_1... 68 1e-09
gi|153807227|ref|ZP_01959895.1| hypothetical protein BACCAC... 67 2e-09
gi|88802492|ref|ZP_01118019.1| putative lipoprotein/thioder... 66 3e-09
gi|83855946|ref|ZP_00949475.1| hypothetical protein CA2559_... 66 3e-09
gi|126662944|ref|ZP_01733942.1| thioredoxin family protein ... 65 5e-09
gi|150005084|ref|YP_001299828.1| thiol-disulfide isomerase ... 64 1e-08
gi|150004527|ref|YP_001299271.1| putative thiol-disulfide o... 64 1e-08
gi|89889631|ref|ZP_01201142.1| hypothetical protein BBFL7_0... 64 1e-08
gi|149277845|ref|ZP_01883985.1| putative thioredoxin family... 63 2e-08
gi|149276200|ref|ZP_01882344.1| putative lipoprotein/thiode... 60 2e-07
gi|88803809|ref|ZP_01119332.1| hypothetical protein PI23P_0... 60 3e-07
gi|126662560|ref|ZP_01733559.1| thioredoxin family protein ... 59 4e-07
gi|124544926|ref|ZP_01704174.1| Redoxin [Shewanella putrefa... 59 4e-07
gi|120597405|ref|YP_961979.1| Redoxin domain protein [Shewa... 59 4e-07
gi|146299771|ref|YP_001194362.1| alkyl hydroperoxide reduct... 58 9e-07
gi|119774816|ref|YP_927556.1| thioredoxin family protein [S... 58 1e-06
gi|149279829|ref|ZP_01885956.1| thioredoxin family protein ... 58 1e-06
gi|150004760|ref|YP_001299504.1| putative thiol-disulfide o... 57 1e-06
gi|150002718|ref|YP_001297462.1| putative thiol:disulfide i... 57 2e-06
gi|149280662|ref|ZP_01886775.1| thioredoxin family protein ... 56 3e-06
gi|149277176|ref|ZP_01883318.1| thioredoxin family protein ... 56 3e-06
gi|156859293|gb|EDO52724.1| hypothetical protein BACUNI_035... 55 5e-06
gi|150006053|ref|YP_001300797.1| thiol:disulfide interchang... 54 1e-05
>gi|34541629|ref|NP_906108.1| thioredoxin family protein [Porphyromonas gingivalis W83]
gi|34397947|gb|AAQ67007.1| thioredoxin family protein [Porphyromonas gingivalis W83]
Length = 336
Score = 685 bits (1767), Expect = 0.0, Method: Composition-based stats.
Identities = 336/336 (100%), Positives = 336/336 (100%)
Query: 1 MLDMELESFLSMEKQGDISDAFLSAVKAEMQQMVLYAAGLAVRNIEETNRLRQKAKELYF 60
MLDMELESFLSMEKQGDISDAFLSAVKAEMQQMVLYAAGLAVRNIEETNRLRQKAKELYF
Sbjct: 1 MLDMELESFLSMEKQGDISDAFLSAVKAEMQQMVLYAAGLAVRNIEETNRLRQKAKELYF 60
Query: 61 YYLERYSPLAEMYKGSEMSLHNAGTATLRGHKNLAGGKRIDIGLWDGSKEFFHEYCYLPD 120
YYLERYSPLAEMYKGSEMSLHNAGTATLRGHKNLAGGKRIDIGLWDGSKEFFHEYCYLPD
Sbjct: 61 YYLERYSPLAEMYKGSEMSLHNAGTATLRGHKNLAGGKRIDIGLWDGSKEFFHEYCYLPD 120
Query: 121 DVQIRLFISKIQLLHFVVGAITTPQYVEKVALLGKVVGSSRYLELLRSFIDLNDPSGKNY 180
DVQIRLFISKIQLLHFVVGAITTPQYVEKVALLGKVVGSSRYLELLRSFIDLNDPSGKNY
Sbjct: 121 DVQIRLFISKIQLLHFVVGAITTPQYVEKVALLGKVVGSSRYLELLRSFIDLNDPSGKNY 180
Query: 181 SRGLFFYDHKFDKLEEVGKEVGENLPEVIKRFFPDKWVLVDVWATWCSPCKKEFGYNKQL 240
SRGLFFYDHKFDKLEEVGKEVGENLPEVIKRFFPDKWVLVDVWATWCSPCKKEFGYNKQL
Sbjct: 181 SRGLFFYDHKFDKLEEVGKEVGENLPEVIKRFFPDKWVLVDVWATWCSPCKKEFGYNKQL 240
Query: 241 HAFLEEKGIAMLYCSVDEPENSDNWRNNLSAFGLTGYHYYITSKAEKELLKIPDFRMLIP 300
HAFLEEKGIAMLYCSVDEPENSDNWRNNLSAFGLTGYHYYITSKAEKELLKIPDFRMLIP
Sbjct: 241 HAFLEEKGIAMLYCSVDEPENSDNWRNNLSAFGLTGYHYYITSKAEKELLKIPDFRMLIP 300
Query: 301 RYLLFDNKGKLVHANLPRPSSEKALYEEIEKLMQGN 336
RYLLFDNKGKLVHANLPRPSSEKALYEEIEKLMQGN
Sbjct: 301 RYLLFDNKGKLVHANLPRPSSEKALYEEIEKLMQGN 336
>gi|124007766|ref|ZP_01692468.1| thioredoxin family protein [Microscilla marina ATCC 23134]
gi|123986712|gb|EAY26493.1| thioredoxin family protein [Microscilla marina ATCC 23134]
Length = 172
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 202 GENLPEVIKRFFPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPEN 261
G+ EV+K+F K V +D WATWC PC+ + Y+++LH + K + LY S D E
Sbjct: 44 GKKFDEVLKQF-KGKVVYIDFWATWCGPCRGQMPYSRKLHEEFKGKDVVFLYISFDRGEK 102
Query: 262 SDNWRNNLSAFGLTGYHYYITSKAEKELLKIPDFRM-LIPRYLLFDNKGKLVHANLPRPS 320
+ WR + + G+H+ K E+ K F++ IPRY+L GKL+ + RPS
Sbjct: 103 A--WRKGIEKMKIQGHHWKPDQKQIGEINK--RFKVQYIPRYMLVGKDGKLLADDFYRPS 158
Query: 321 SEKA 324
S KA
Sbjct: 159 SAKA 162
>gi|86130916|ref|ZP_01049515.1| putative lipoprotein/thioderoxin [Cellulophaga sp. MED134]
gi|85818327|gb|EAQ39487.1| putative lipoprotein/thioderoxin [Dokdonia donghaensis MED134]
Length = 457
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 213 FPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAF 272
F K+V +DVWATWCSPC E K+L + E+ IA SVD +N D WR ++
Sbjct: 337 FEGKYVYIDVWATWCSPCIAEIPSLKKLESEYEDANIAFASISVDFEKNYDKWRKMVTDK 396
Query: 273 GLTGYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANLPRPSSEKAL 325
L G + E + + R IPR++L D G +V A+ P+PSSE+ +
Sbjct: 397 SLGGSQLIADNNFESKFAQDYAIRS-IPRFILIDPNGNIVSADAPKPSSEQLI 448
>gi|149371414|ref|ZP_01890900.1| thioredoxin family protein [unidentified eubacterium SCB49]
gi|149355552|gb|EDM44111.1| thioredoxin family protein [unidentified eubacterium SCB49]
Length = 344
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 216 KWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPEN--------SDNWRN 267
K+V +DVWATWC+PCK E KQL E+K IA + S+D+ + +W+
Sbjct: 221 KFVYIDVWATWCAPCKAEIPSLKQLEHDYEDKDIAFVSLSIDDDRSHGGSWDKAKADWKA 280
Query: 268 NLSAFGLTGYHYYITSKAEKELLKIPDFRML-IPRYLLFDNKGKLVHANLPRPSSEK 323
++ L G Y + + ++ D+R+ IPR++L D +GK+V AN PRPSS+K
Sbjct: 281 MVADKDLGGIQIYAPKGWKSKFIR--DYRINGIPRFILVDKEGKVVDANAPRPSSDK 335
>gi|60683073|ref|YP_213217.1| hypothetical protein BF3623 [Bacteroides fragilis NCTC 9343]
gi|60494507|emb|CAH09304.1| putative exported protein [Bacteroides fragilis NCTC 9343]
Length = 473
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 213 FPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAF 272
F K V +DVWATWC PC KEF Y L + LY S+D PE W ++
Sbjct: 348 FKGKVVYIDVWATWCGPCLKEFQYLPTLKEKAHNMDVVYLYISIDRPEERKKWEKTIAYH 407
Query: 273 GLTGYHYYITSKAEKELL-KIPDFRML--IPRYLLFDNKGKLVHANLPRPSSEKALYEEI 329
L GYH + K K L ++ + R + IP +++ D GK+V + PS + + E++
Sbjct: 408 QLKGYHLLVNEKLGKSLYTELGNERQILSIPCFVIIDKTGKIVIRHAAAPSEPEKVIEQL 467
>gi|53715115|ref|YP_101107.1| hypothetical protein BF3831 [Bacteroides fragilis YCH46]
gi|52217980|dbj|BAD50573.1| hypothetical protein [Bacteroides fragilis YCH46]
Length = 473
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 213 FPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAF 272
F K V +DVWATWC PC KEF Y L + LY S+D PE W ++
Sbjct: 348 FKGKVVYIDVWATWCGPCLKEFQYLPALKEKAHNMDVVYLYISIDRPEERKKWEKTIAYH 407
Query: 273 GLTGYHYYITSKAEKELL-KIPDFRML--IPRYLLFDNKGKLVHANLPRPSSEKALYEEI 329
L GYH + K K L ++ + R + IP +++ D GK+V + PS + + E++
Sbjct: 408 QLKGYHLLVNEKLGKSLYTELGNERQILSIPCFVIIDKTGKIVIRHAAAPSEPEKVIEQL 467
>gi|29348731|ref|NP_812234.1| putative thioredoxin family protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|29340637|gb|AAO78428.1| putative thioredoxin family protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 870
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 202 GENLPEVIKRFFPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPEN 261
GE L I + K V +DVW TWC PCK Y E K + LY +
Sbjct: 737 GEQLFRKIIEPYKGKVVYLDVWGTWCGPCKDMMQYAGSAKKLFEGKDVIFLYLCNHSSDK 796
Query: 262 SDNWRNNLSAFGLTG---YHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANLPR 318
S W+N + +GLTG HY + + ++ + K R P Y+L D +G +V+ + PR
Sbjct: 797 S--WKNIIKEYGLTGKIAVHYNLPDEQQRAIEKFLQVRSF-PTYMLIDKEGNIVNRDAPR 853
Query: 319 PSSEKALYEEIEKLMQ 334
P+ E L + KL++
Sbjct: 854 PNRENDLLNAVYKLLE 869
>gi|150024382|ref|YP_001295208.1| hypothetical protein FP0274 [Flavobacterium psychrophilum JIP02/86]
gi|149770923|emb|CAL42388.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
Length = 334
Score = 75.9 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Query: 213 FPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAF 272
F K++ +DVWATWC PC+ E + +++ EK I + S+D ++ + W+ +S
Sbjct: 215 FKGKYIYIDVWATWCGPCRGEIPFLQKIEEKYHEKNIEFVSISIDAQKDFEKWKKFVSDK 274
Query: 273 GLTGYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANLPRPSSEKALYEEIEKL 332
L G + + + K + IPR++L D GK+++AN RPSS K L E ++KL
Sbjct: 275 QLGGTQLFADNDWNSDFAKKLNITS-IPRFILIDTYGKIINANTERPSSPK-LQEVLDKL 332
Query: 333 M 333
+
Sbjct: 333 L 333
>gi|86141051|ref|ZP_01059610.1| thioredoxin family protein [Flavobacterium sp. MED217]
gi|85832993|gb|EAQ51442.1| thioredoxin family protein [Leeuwenhoekiella blandensis MED217]
Length = 235
Score = 75.5 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 209 IKRFFPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNN 268
++ F +K +++D WATWC PC K+F +K++HA ++++ + +Y + W+
Sbjct: 110 MRETFKNKALMLDFWATWCGPCLKDFPSSKKIHAEVKDEPVEFIYLCSSNGSTEEEWKQR 169
Query: 269 LSAFGLTGYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKG 309
++ F L G H Y+ K E EL+ + D R P Y + G
Sbjct: 170 IAEFQLDGTHLYVDEKIEAELMTMFDSRGGFPTYAFINKSG 210
>gi|86133721|ref|ZP_01052303.1| possible thiol-disulfide oxidoreductase [Tenacibaculum sp. MED152]
gi|85820584|gb|EAQ41731.1| possible thiol-disulfide oxidoreductase [Polaribacter dokdonensis
MED152]
Length = 344
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 213 FPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENS--------DN 264
F K+V +DVWATWC PC ++ Y ++L + K IA + S DE + S
Sbjct: 219 FKGKFVYIDVWATWCGPCIQQIPYLQKLEEEYKNKNIAFVSISTDESQRSGGSWEAAEKK 278
Query: 265 WRNNLSAFGLTGYHYYITSKAEKELLKIPDFRM-LIPRYLLFDNKGKLVHANLPRPS 320
WRN + ++G H + + K+ +++ IPR++L D KG +V AN PRPS
Sbjct: 279 WRNFVKDKNMSGVHLW----SGKDFSFQRAYKINTIPRFILIDPKGNIVDANAPRPS 331
>gi|88801376|ref|ZP_01116904.1| hypothetical protein PI23P_01917 [Polaribacter irgensii 23-P]
gi|88782034|gb|EAR13211.1| hypothetical protein PI23P_01917 [Polaribacter irgensii 23-P]
Length = 459
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 216 KWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAFGLT 275
K+V +DVWATWC PC E K++ K I L S+D ++ D W+ + L
Sbjct: 343 KYVYIDVWATWCGPCIAEIPSLKKVEEAFHGKNIQFLSISIDAEKDHDKWKKMIVEKKLG 402
Query: 276 GYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANLPRPSSEK 323
G + E + +K + IPR++L D KG ++ AN PRPS +K
Sbjct: 403 GIQLIADNDWESQFIKEYMIKG-IPRFILLDPKGNIISANAPRPSDKK 449
>gi|154491499|ref|ZP_02031125.1| hypothetical protein PARMER_01109 [Parabacteroides merdae ATCC
43184]
gi|154088300|gb|EDN87345.1| hypothetical protein PARMER_01109 [Parabacteroides merdae ATCC
43184]
Length = 483
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Query: 213 FPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAF 272
+ K + +D+WATWC PC+ F + K L + +EK I +LY S+D PE + W+ + +
Sbjct: 360 YKGKVIFMDIWATWCGPCRDSFAFVKPLQEYAQEKDIVLLYLSIDNPEAEEKWKKMAAHY 419
Query: 273 GLTGYHYYITSKAEKELLKI--PDFRMLIPRYLLFDNKGKLVHANLPRPSSEKALYEEIE 330
L G H I ++E+ + + IP ++ GK+ SSEK EE++
Sbjct: 420 DLKGEHIRIQEAFKQEIYDTFGSNGALYIPHCVIIGKDGKIRQK--VAASSEKM--EELK 475
Query: 331 KLMQ 334
K ++
Sbjct: 476 KQLE 479
>gi|110638288|ref|YP_678497.1| thioredoxin family protein [Cytophaga hutchinsonii ATCC 33406]
gi|110280969|gb|ABG59155.1| thioredoxin family protein [Cytophaga hutchinsonii ATCC 33406]
Length = 174
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 213 FPDKWVLVDVWATWCSPCKKEFGYNKQL-HAFLEEKGIAMLYCSVDEPENSDNWRNNLSA 271
F K V +D WATWC PC E ++K+L F I +Y SVD +N D W++ +
Sbjct: 52 FKGKVVYIDFWATWCGPCVAEIPHSKKLKEKFAGNDSIVFMYVSVDNEDNVDGWKSFIRK 111
Query: 272 FGLTGYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANLPRPS 320
GLTG +++ + IPR++L D GK+ + P PS
Sbjct: 112 KGLTGVQLISRDGGKEDRVGERYGLQYIPRFVLVDKSGKVAYGQAPAPS 160
>gi|153807083|ref|ZP_01959751.1| hypothetical protein BACCAC_01360 [Bacteroides caccae ATCC 43185]
gi|149130203|gb|EDM21413.1| hypothetical protein BACCAC_01360 [Bacteroides caccae ATCC 43185]
Length = 465
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 213 FPDKWVLVDVWATWCSPCKKEFGYNKQLHA-FLEEKGIAMLYCSVDEPENSDNWRNNLSA 271
F K V +D+WATWC PCKKE K L A + + K I + SVD +N W++ +
Sbjct: 344 FRGKVVYIDIWATWCGPCKKEMPAMKALEAEYKDNKDIVFMGISVDASKNIQKWKDFVIK 403
Query: 272 FGLTGYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANLPRPSSEK 323
L G + A L K P IPR++L G L++ + PRPSS +
Sbjct: 404 EQLPGVQLFAGDMAGPALSK-PYKITGIPRFMLVGKDGSLLYMDAPRPSSSE 454
>gi|146299009|ref|YP_001193600.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Flavobacterium johnsoniae UW101]
gi|146153427|gb|ABQ04281.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Flavobacterium johnsoniae UW101]
Length = 331
Score = 68.6 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 216 KWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAFGLT 275
K+V +D+WATWC+PC+ E Y +++ K I + S+D+ ++++ W+ ++ L
Sbjct: 215 KYVYIDLWATWCAPCRAEIPYLQKIEEKYHGKNIEFVSISIDKAKDNEKWKKFVTDKKLG 274
Query: 276 GYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANLPRPSSEKALYEEIEKLM 333
G + E E + + M IPR++L D G +V ++ RPS K L +++ L+
Sbjct: 275 GVQLFADKDWESEFV-VNYGVMGIPRFILLDPNGNIVSSDATRPSDPK-LQDQLNTLL 330
>gi|88803108|ref|ZP_01118634.1| hypothetical protein PI23P_10987 [Polaribacter irgensii 23-P]
gi|88780674|gb|EAR11853.1| hypothetical protein PI23P_10987 [Polaribacter irgensii 23-P]
Length = 505
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Query: 218 VLVDVWATWCSPCKKEFGYNKQ-LHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAFGLTG 276
+ VD WA+WC+PC+K +K+ L+ ++ +A +Y S+D+ +++ WRN G+
Sbjct: 389 IYVDFWASWCAPCRKAMPASKKTLNELHGKEKVAFIYLSIDK--DNEAWRNASRVEGIES 446
Query: 277 YH--YYITSKAEKELLKIPDFRML-IPRYLLFDNKGKLVHANLPRPSSEK 323
+ Y I + E + + D ++ IPRY++FD GKLV N P P+S+K
Sbjct: 447 HKHSYLILNPDESKFMH--DLKVKEIPRYMIFDTNGKLVEDNAPGPTSKK 494
>gi|153807227|ref|ZP_01959895.1| hypothetical protein BACCAC_01505 [Bacteroides caccae ATCC 43185]
gi|149130347|gb|EDM21557.1| hypothetical protein BACCAC_01505 [Bacteroides caccae ATCC 43185]
Length = 873
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 202 GENLPEVIKRFFPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPEN 261
GE L I + K + +D+W TWC PCK Y + K + LY +
Sbjct: 740 GEQLFRKIIEPYKGKVIYLDIWGTWCGPCKDMMQYAGNIKNLFAGKEVVFLYLCNHSTDK 799
Query: 262 SDNWRNNLSAFGLT---GYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANLPR 318
S W+N + + LT HY + K + + K P Y+L D +G +V+ PR
Sbjct: 800 S--WKNIIKEYSLTSKSSVHYNLPDKQQSAIEKYLGVHSF-PTYMLIDKEGNIVNRKAPR 856
Query: 319 PSSE----KALYEEIEK 331
P+ E A+Y+E+EK
Sbjct: 857 PTMENQLLNAVYKELEK 873
>gi|88802492|ref|ZP_01118019.1| putative lipoprotein/thioderoxin [Polaribacter irgensii 23-P]
gi|88781350|gb|EAR12528.1| putative lipoprotein/thioderoxin [Polaribacter irgensii 23-P]
Length = 342
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 213 FPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEP-------ENSDN- 264
F K+V +D+WATWC PC ++ + L K I + S DE E ++N
Sbjct: 217 FAGKYVYIDIWATWCGPCIQQIPFIASLEKEYHSKNIEFVSISTDESRRNGGSWEAAENK 276
Query: 265 WRNNLSAFGLTGYHYYITSKAE-KELLKIPDFRMLIPRYLLFDNKGKLVHANLPRPSSEK 323
WR+ + + LTG + ++ +I IPR++L D KG +V AN PRPS K
Sbjct: 277 WRSFVKSEELTGTQLWAGEDISFQQAYQINS----IPRFILVDPKGNIVDANAPRPSDPK 332
>gi|83855946|ref|ZP_00949475.1| hypothetical protein CA2559_02625 [Croceibacter atlanticus
HTCC2559]
gi|83849746|gb|EAP87614.1| hypothetical protein CA2559_02625 [Croceibacter atlanticus
HTCC2559]
Length = 466
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 217 WVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAFGLTG 276
+V +DVWATWC PC E KQ+ + + + S+D ++ W+ + L G
Sbjct: 350 YVYIDVWATWCGPCIAEIPSLKQVEKDYHGQPVKFVSISIDNEKDKQKWKAMIEEKDLQG 409
Query: 277 YHYYITSKAEKELLKIPDFRML-IPRYLLFDNKGKLVHANLPRPSS 321
+ + E + ++ D+ + IPR++L D KG +V A+ PRPS+
Sbjct: 410 IQLFADNNWESKFVQ--DYGIQGIPRFILIDKKGHIVSADAPRPSN 453
>gi|126662944|ref|ZP_01733942.1| thioredoxin family protein [Flavobacteria bacterium BAL38]
gi|126624602|gb|EAZ95292.1| thioredoxin family protein [Flavobacteria bacterium BAL38]
Length = 334
Score = 65.5 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 216 KWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAFGLT 275
K+V +DVWATWC PC+ E + K++ K I + SVD ++ + W+ + L
Sbjct: 218 KYVYIDVWATWCGPCRAEIPHLKKVEEKYHGKNIEFVSISVDTDKDHEKWQKFVVDKELG 277
Query: 276 GYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANLPRPSSEKALYEEIEKLMQ 334
G + + +K IPR+LL GK+V A+ RPSS + L E ++ L++
Sbjct: 278 GIQLFADKNWNSDFIKAFGINS-IPRFLLIGPDGKVVKADAARPSSSQ-LIELLDSLLK 334
>gi|150005084|ref|YP_001299828.1| thiol-disulfide isomerase and thioredoxin [Bacteroides vulgatus
ATCC 8482]
gi|149933508|gb|ABR40206.1| thiol-disulfide isomerase and thioredoxin [Bacteroides vulgatus
ATCC 8482]
Length = 446
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Query: 213 FPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAF 272
F K+V +D+WATWC PC++E + ++L K I + S D N W N + A
Sbjct: 332 FKGKYVYIDIWATWCGPCQREIPHLQKLEEKYHGKDIYFVSISCD--NNKKAWENRVRA- 388
Query: 273 GLTGYHYYITSKAEKELLKIPDFRML-IPRYLLFDNKGKLVHANLPRPSSEKAL 325
GL G + + + D+ + IPR++L D +GK++ ++ RPS K +
Sbjct: 389 GLKGIQLHFVNGDT----FMNDYMIKGIPRFILLDKEGKIISVDMSRPSDPKTI 438
>gi|150004527|ref|YP_001299271.1| putative thiol-disulfide oxidoreductase [Bacteroides vulgatus ATCC
8482]
gi|149932951|gb|ABR39649.1| putative thiol-disulfide oxidoreductase [Bacteroides vulgatus ATCC
8482]
Length = 449
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 216 KWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAFGLT 275
K++ +DVWATWC PC+ E K+L K I + S D +N W N ++ L
Sbjct: 336 KYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCD--KNKKAWENMVTKDQLK 393
Query: 276 GYHYYI-TSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANLPRPSSEK 323
G ++ T + + I IPR++L D GK++ AN+ RPS K
Sbjct: 394 GIQLHMGTDRTFMDAYLING----IPRFILLDRDGKIISANMTRPSDPK 438
>gi|89889631|ref|ZP_01201142.1| hypothetical protein BBFL7_01448 [Flavobacteria bacterium BBFL7]
gi|89517904|gb|EAS20560.1| hypothetical protein BBFL7_01448 [Flavobacteria bacterium BBFL7]
Length = 177
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 216 KWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAFGLT 275
K V VD WA+WC PC+ + +L + K + LY S+D N+ W G T
Sbjct: 62 KVVYVDYWASWCKPCRVMMPASAKLKERYKGKDVVFLYISIDTKRNA--WEKANQEEGFT 119
Query: 276 GYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANLPRP 319
+ Y T+ + ++ ++ + IPRY+L+D G+++ N RP
Sbjct: 120 KHSYIATNYPKAKIFQLRNVSS-IPRYMLYDKNGRMIDDNAMRP 162
>gi|149277845|ref|ZP_01883985.1| putative thioredoxin family protein [Pedobacter sp. BAL39]
gi|149231533|gb|EDM36912.1| putative thioredoxin family protein [Pedobacter sp. BAL39]
Length = 707
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 216 KWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAFGLT 275
K + +D W TWC PCK+E Y L+ K + +Y + PE + W++ + LT
Sbjct: 589 KIIYLDFWGTWCGPCKEEMKYAGVAKEALKNKEVIFMYFANRSPE--ELWKSMIKEMDLT 646
Query: 276 G---YHYYITSKAEKEL---LKIPDFRMLIPRYLLFDNKGKLVHANLPRPSSEKALYEEI 329
G HY + + ++ + I F P Y+L D +GK+V PRPS L +
Sbjct: 647 GENIVHYRLPEEQQRLIENRFSINSF----PTYMLVDQEGKVVTMTAPRPSDPNGLVRAV 702
Query: 330 EKLMQ 334
+L++
Sbjct: 703 GELLK 707
>gi|149276200|ref|ZP_01882344.1| putative lipoprotein/thioderoxin [Pedobacter sp. BAL39]
gi|149232720|gb|EDM38095.1| putative lipoprotein/thioderoxin [Pedobacter sp. BAL39]
Length = 369
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 10/130 (7%)
Query: 205 LPEVIKRFFPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDN 264
L EVI + +K+ L+D WA+WC PC+KE + + +++G +L S+D ++ D
Sbjct: 250 LKEVIAK---NKFTLIDFWASWCGPCRKENPNVVKAYDAFKDQGFTVLSVSLD--DDGDK 304
Query: 265 WRNNLSAFGLTGYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANLPRPSSEKA 324
W+ + G+ YH + K KE + IP+ +L D GK++ NL +
Sbjct: 305 WKAAIEKDGMPWYHVS-SLKGWKEPAAVLYGIRAIPQNVLVDGNGKVLATNL----RAET 359
Query: 325 LYEEIEKLMQ 334
LY ++++L++
Sbjct: 360 LYNKVQELVK 369
>gi|88803809|ref|ZP_01119332.1| hypothetical protein PI23P_06246 [Polaribacter irgensii 23-P]
gi|88780337|gb|EAR11519.1| hypothetical protein PI23P_06246 [Polaribacter irgensii 23-P]
Length = 162
Score = 59.7 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 204 NLPEVIKRFFPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSD 263
+L E++K++ K VL+DVWA+WC C K K L + L+ SVD+ +N+
Sbjct: 42 SLKELLKKYRGKK-VLIDVWASWCKDCVKGLPAVKNLQNSFPN--VIFLFLSVDKSKNA- 97
Query: 264 NWRNNLSAFGLTGYHYYITSKAEKELLKIPDFRML--IPRYLLFDNKGKLVHANLPRPSS 321
W+N + F + G HY + + DF L IPRYL+ D GK+ N +S
Sbjct: 98 -WKNGIQRFQIKGAHYQLPKGMKSG--AFVDFIGLSWIPRYLVIDELGKITLFN-ATSAS 153
Query: 322 EKAL 325
E A+
Sbjct: 154 ESAV 157
>gi|126662560|ref|ZP_01733559.1| thioredoxin family protein [Flavobacteria bacterium BAL38]
gi|126625939|gb|EAZ96628.1| thioredoxin family protein [Flavobacteria bacterium BAL38]
Length = 491
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 216 KWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAFGLT 275
K + +D WA+WC+PC+ +++LHA E + LY S D N + W+ LT
Sbjct: 377 KIIYIDFWASWCAPCRAALPSSRKLHA--EYTNVLFLYLSTD--SNFEAWKKANQYEKLT 432
Query: 276 GYHYYITSKAEKELLK--IPDFRMLIPRYLLFDNKGKLVHANLPRPSSEK 323
Y+I + E LK DF IPRY+L ++ G++ + P SEK
Sbjct: 433 ENSYFIINPKTSEYLKKLAIDF---IPRYVLINSNGEISNPKAASPDSEK 479
>gi|124544926|ref|ZP_01704174.1| Redoxin [Shewanella putrefaciens 200]
gi|124511569|gb|EAY55633.1| Redoxin [Shewanella putrefaciens 200]
Length = 194
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 216 KWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAFGLT 275
K VLV++WATWC+PC +E ++L + K IA++ S+D E + R L+ +G +
Sbjct: 76 KLVLVNLWATWCAPCLREIPELQKLKQQYQGKNIAIIPISID--EEPKDVRPFLNQYGFS 133
Query: 276 GYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLV 312
GY ++ K E + IP ++P +FD KG LV
Sbjct: 134 GYATWLDPKQNVEQI-IP--ANVVPASYIFDAKGNLV 167
>gi|120597405|ref|YP_961979.1| Redoxin domain protein [Shewanella sp. W3-18-1]
gi|146294454|ref|YP_001184878.1| Redoxin domain protein [Shewanella putrefaciens CN-32]
gi|120557498|gb|ABM23425.1| Redoxin domain protein [Shewanella sp. W3-18-1]
gi|145566144|gb|ABP77079.1| Redoxin domain protein [Shewanella putrefaciens CN-32]
Length = 194
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 216 KWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAFGLT 275
K VLV++WATWC+PC +E ++L + K IA++ S+D E + R L+ +G +
Sbjct: 76 KLVLVNLWATWCAPCLREIPELQKLKQQYQGKNIAIIPISID--EEPKDVRPFLNQYGFS 133
Query: 276 GYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLV 312
GY ++ K E + IP ++P +FD KG LV
Sbjct: 134 GYATWLDPKQNVEQI-IP--ANVVPASYIFDAKGNLV 167
>gi|146299771|ref|YP_001194362.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Flavobacterium johnsoniae UW101]
gi|146154189|gb|ABQ05043.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Flavobacterium johnsoniae UW101]
Length = 378
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 143 TPQYVEKV-ALLGKVVGSSRYLELLRSFIDLNDPSGKNYSRGLFFYDHKFDKLEEVGKEV 201
TP+ V+ A+L V S Y + L+ IDLN+ + + +F + + GK V
Sbjct: 204 TPEQVKMYYAVLSPDVQKSIYGKQLKEAIDLNEKTAVGVTAP------EFSQTDIDGKVV 257
Query: 202 GENLPEVIKRFFPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPEN 261
NL + + K+VLVD WA+WC PC+KE + EKG +L S+D+ +N
Sbjct: 258 --NLSD-----YKGKYVLVDFWASWCGPCRKENPNVVLAYKTYHEKGFDVLGVSLDDKKN 310
Query: 262 SDNWRNNLSAFGLTGYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANLPRPSS 321
W+ + GLT H + E + +M +P L GK+V NL
Sbjct: 311 L--WQKAIEKDGLTWTHVSDLKGWQNEAAVLYGVKM-VPTNYLIGPDGKIVAKNLREAEL 367
Query: 322 EKALYEEIEK 331
+ L E K
Sbjct: 368 QSKLKEIFSK 377
>gi|119774816|ref|YP_927556.1| thioredoxin family protein [Shewanella amazonensis SB2B]
gi|119767316|gb|ABL99886.1| thioredoxin family protein [Shewanella amazonensis SB2B]
Length = 173
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 63/113 (55%), Gaps = 8/113 (7%)
Query: 216 KWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVD-EPENSDNWRNNLSAFGL 274
K V VD WA+WC PC+K F + ++H +EKG+A++ ++D + +++ + ++L +
Sbjct: 57 KVVYVDFWASWCGPCRKSFPWMNEMHRRYQEKGLAVIAINLDTDSQDAKPFLDDLKPQFI 116
Query: 275 TGYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANLPRPSSEKALYE 327
GY ++ E+ + D + +P +FD GKLV ++ + + A YE
Sbjct: 117 IGY------DSQGEVARRFDL-LGMPSSFVFDRSGKLVATHVGFFTEKAAEYE 162
>gi|149279829|ref|ZP_01885956.1| thioredoxin family protein [Pedobacter sp. BAL39]
gi|149229419|gb|EDM34811.1| thioredoxin family protein [Pedobacter sp. BAL39]
Length = 366
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 12/142 (8%)
Query: 191 FDKLEEVGKEVGENLPEVIKRFFPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIA 250
F +L GKE+ L + F K++L+D WA+WC PC++E ++ + ++KG
Sbjct: 234 FAQLNPQGKEI--RLAD-----FRKKYLLLDFWASWCGPCREENPNVRKAYDRWKDKGFM 286
Query: 251 MLYCSVDEPENSDNWRNNLSAFGLTGYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGK 310
+L S+D P D W + GL E KI R IP L GK
Sbjct: 287 VLGVSLDGPGQKDAWLKAIETDGLMWPQVADMKGWENSAAKIYGVRS-IPTNFLISPDGK 345
Query: 311 LVHANLPRPSSEKALYEEIEKL 332
++ NL +AL +E+EK+
Sbjct: 346 IIAKNL----RGEALTDELEKI 363
>gi|150004760|ref|YP_001299504.1| putative thiol-disulfide oxidoreductase [Bacteroides vulgatus ATCC
8482]
gi|149933184|gb|ABR39882.1| putative thiol-disulfide oxidoreductase [Bacteroides vulgatus ATCC
8482]
Length = 455
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 213 FPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAF 272
F K + +D+WATWC PC +E + L K I L S D + W L
Sbjct: 340 FKGKVIYIDLWATWCGPCIQESPAFEALGKKYVGKDIVFLPVSTD--TTTKPWLRYLDGH 397
Query: 273 GLTGYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANLPRPSSEK 323
Y+ A KE I M IPR++L D +V+A PRPSSE+
Sbjct: 398 KKELTQYHSNDVALKESWAI----MYIPRFILIDKDFNIVNAYAPRPSSEE 444
>gi|150002718|ref|YP_001297462.1| putative thiol:disulfide interchange protein DsbE [Bacteroides
vulgatus ATCC 8482]
gi|149931142|gb|ABR37840.1| putative thiol:disulfide interchange protein DsbE [Bacteroides
vulgatus ATCC 8482]
Length = 702
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 194 LEEVGKEVGENLPEVIKRFFPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLY 253
+ E G+ E+L I F K +LVD WATWC PCK K + LE K I ++
Sbjct: 566 VNESGEVKDEDLFYSIISKFKGKVILVDFWATWCGPCKMAMKQMKPMKKDLEGKDIVYVF 625
Query: 254 CSVDEPENSDNWRNNLSAFGLTGYHYYITSKAEKELLKIPDFRML-IPRYLLFDNKGKLV 312
+ E + W N + + G HY +T+ K L K F + +P Y++ D +G ++
Sbjct: 626 IA-GENSPKETWDNMIP--DIHGEHYRVTAAQWKYLSK--QFSIQGVPTYIIVDKEGAVI 680
Query: 313 HANLPRP---SSEKALYEEIEK 331
+ P + +K L + +EK
Sbjct: 681 QKHTGFPGVDTVKKELMKALEK 702
>gi|149280662|ref|ZP_01886775.1| thioredoxin family protein [Pedobacter sp. BAL39]
gi|149228602|gb|EDM34008.1| thioredoxin family protein [Pedobacter sp. BAL39]
Length = 317
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 216 KWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAFGLT 275
K++L+D WA+WC PC+ E+ + K+ + ++K + ++ S+D+ +++ W N + + G
Sbjct: 206 KYILIDFWASWCGPCRTEYPFLKRAYTKYKDKNLEIIGVSIDDDKSA--WLNAIKSNGFQ 263
Query: 276 GYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANL 316
E + K+ IP+ L D +GK++ NL
Sbjct: 264 WIQLSDMKGRENAIAKMYGISA-IPQSFLIDPQGKIIAKNL 303
>gi|149277176|ref|ZP_01883318.1| thioredoxin family protein [Pedobacter sp. BAL39]
gi|149232053|gb|EDM37430.1| thioredoxin family protein [Pedobacter sp. BAL39]
Length = 381
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 213 FPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAF 272
F K+VLVD WA+WC PC+ E + ++K +L S+D+P D W +
Sbjct: 260 FKGKYVLVDFWASWCGPCRAENPNVVTAYKNFKDKNFTVLGVSLDQPGKKDAWLAAIEKD 319
Query: 273 GLTGYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANLPRPSSEKALYE 327
GLT H + + K+ + IP L D GK++ ++ +K L E
Sbjct: 320 GLTWTHVSDLKFWDNAVAKMYGVQS-IPANYLIDPTGKIIAKDIRGEELQKKLAE 373
>gi|156859293|gb|EDO52724.1| hypothetical protein BACUNI_03519 [Bacteroides uniformis ATCC 8492]
Length = 621
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 193 KLEEVGKEVG-ENLPEVIKRFFPDKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAM 251
K+ EV KEV ++L +VI R + K VLVD+W TWC PC + K L L+E +
Sbjct: 489 KIVEVEKEVAADSLLQVITRPYRGKMVLVDMWNTWCGPCMRAMKSLKPLKEELKE--VVY 546
Query: 252 LYCSVDEPENSDNWRNNLSAFGLTGYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKL 311
LY VDE W+ + + G H I+++ L K+ ++ IP Y + + +G +
Sbjct: 547 LYI-VDETSPEGKWKVMIP--DIPGIHCRISNEQSTALAKLYEYPG-IPTYFVVNREGDI 602
Query: 312 VHANLPRPSSE 322
+ P E
Sbjct: 603 SYKATGFPGVE 613
>gi|150006053|ref|YP_001300797.1| thiol:disulfide interchange protein [Bacteroides vulgatus ATCC
8482]
gi|149934477|gb|ABR41175.1| thiol:disulfide interchange protein [Bacteroides vulgatus ATCC
8482]
Length = 363
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 215 DKWVLVDVWATWCSPCKKEFGYNKQLHAFLEEKGIAMLYCSVDEPENSDNWRNNLSAFGL 274
+K+ L+D WA+WC PC+KE + + ++KG ++ S+D EN+D W+ ++A +
Sbjct: 251 NKYTLIDFWASWCGPCRKEMPNVVEAYKAFKDKGFGIVGISLD--ENADKWKEAITALNI 308
Query: 275 TGYHYYITSKAEKELLKIPDFRMLIPRYLLFDNKGKLVHANL 316
T K+ IP +L D +G +V NL
Sbjct: 309 TWPQMSDLQGWNNAGAKLYGVNS-IPATVLVDQEGTIVARNL 349
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.320 0.138 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,293,429,761
Number of Sequences: 5470121
Number of extensions: 57247666
Number of successful extensions: 131370
Number of sequences better than 1.0e-05: 44
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 131326
Number of HSP's gapped (non-prelim): 45
length of query: 336
length of database: 1,894,087,724
effective HSP length: 133
effective length of query: 203
effective length of database: 1,166,561,631
effective search space: 236812011093
effective search space used: 236812011093
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)