BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SSA_0073
(150 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|125716954|ref|YP_001034087.1| hypothetical protein SSA_0... 295 4e-79
gi|157074572|gb|ABV09255.1| conserved hypothetical protein ... 224 1e-57
gi|148993735|ref|ZP_01823162.1| hypothetical protein CGSSp9... 221 8e-57
gi|15901526|ref|NP_346130.1| hypothetical protein SP_1691 [... 219 3e-56
gi|148988741|ref|ZP_01820174.1| hypothetical protein CGSSp6... 219 4e-56
gi|149006766|ref|ZP_01830452.1| hypothetical protein CGSSp1... 219 4e-56
gi|149001981|ref|ZP_01826935.1| hypothetical protein CGSSp1... 216 4e-55
gi|15901181|ref|NP_345785.1| hypothetical protein SP_1327 [... 153 4e-36
gi|90962907|ref|YP_536822.1| hypothetical protein LSL_1935 ... 142 6e-33
gi|15894123|ref|NP_347472.1| Putative beta-D-galactosidase ... 90 4e-17
gi|156862256|gb|EDO55687.1| hypothetical protein BACUNI_007... 90 5e-17
gi|156110256|gb|EDO12001.1| hypothetical protein BACOVA_025... 86 6e-16
gi|153806407|ref|ZP_01959075.1| hypothetical protein BACCAC... 86 9e-16
gi|29346180|ref|NP_809683.1| hypothetical protein BT_0770 [... 84 2e-15
gi|153890946|ref|ZP_02011996.1| conserved hypothetical prot... 80 5e-14
gi|53712998|ref|YP_098990.1| hypothetical protein BF1709 [B... 79 9e-14
gi|150005827|ref|YP_001300571.1| hypothetical protein BVU_3... 78 2e-13
gi|123441692|ref|YP_001005676.1| hypothetical protein YE136... 77 4e-13
gi|34764909|ref|ZP_00145259.1| Protein yjgK [Fusobacterium ... 76 5e-13
gi|19704469|ref|NP_604031.1| Hypothetical cytosolic protein... 76 6e-13
gi|74318447|ref|YP_316187.1| Conserved hypothetical protein... 76 7e-13
gi|83319313|ref|YP_424392.1| conserved hypothetical cytosol... 75 1e-12
gi|91791843|ref|YP_561494.1| conserved hypothetical protein... 74 2e-12
gi|153806822|ref|ZP_01959490.1| hypothetical protein BACCAC... 74 2e-12
gi|154492252|ref|ZP_02031878.1| hypothetical protein PARMER... 74 3e-12
gi|24375674|ref|NP_719717.1| hypothetical protein SO_4189 [... 74 3e-12
gi|60681209|ref|YP_211353.1| hypothetical protein BF1715 [B... 74 3e-12
gi|77975464|ref|ZP_00830999.1| COG2731: Beta-galactosidase,... 72 7e-12
gi|16122759|ref|NP_406072.1| hypothetical protein YPO2541 [... 72 8e-12
gi|54020358|ref|YP_115650.1| hypothetical protein mhp136 [M... 72 8e-12
gi|149197626|ref|ZP_01874676.1| hypothetical protein LNTAR_... 72 1e-11
gi|78776452|ref|YP_392767.1| hypothetical protein Tmden_025... 71 2e-11
gi|98989862|gb|ABF60035.1| YiaL [Klebsiella pneumoniae] 70 3e-11
gi|14582514|gb|AAK69522.1|AF282849_3 YiaL [Klebsiella oxytoca] 70 3e-11
gi|77976624|ref|ZP_00832102.1| COG2731: Beta-galactosidase,... 70 4e-11
gi|154504468|ref|ZP_02041206.1| hypothetical protein RUMGNA... 70 4e-11
gi|77961195|ref|ZP_00825039.1| COG2731: Beta-galactosidase,... 70 5e-11
gi|117922148|ref|YP_871340.1| conserved hypothetical protei... 69 6e-11
gi|126699855|ref|YP_001088752.1| hypothetical protein CD223... 69 6e-11
gi|113971870|ref|YP_735663.1| conserved hypothetical protei... 69 7e-11
gi|114045924|ref|YP_736474.1| conserved hypothetical protei... 69 7e-11
gi|113948759|ref|ZP_01434416.1| conserved hypothetical prot... 69 7e-11
gi|119773643|ref|YP_926383.1| hypothetical protein Sama_050... 69 8e-11
gi|77957615|ref|ZP_00821666.1| COG2731: Beta-galactosidase,... 69 9e-11
gi|71893592|ref|YP_279038.1| hypothetical protein MHJ_0236 ... 69 1e-10
gi|152998979|ref|YP_001364660.1| conserved hypothetical pro... 69 1e-10
gi|51246248|ref|YP_066132.1| hypothetical protein DP2396 [D... 68 1e-10
gi|127514281|ref|YP_001095478.1| conserved hypothetical pro... 68 2e-10
gi|156112239|gb|EDO13984.1| hypothetical protein BACOVA_002... 68 2e-10
gi|148323211|gb|EDK88461.1| hypothetical protein FNP_0658 [... 67 2e-10
gi|15829131|ref|NP_326491.1| hypothetical protein MYPU_6600... 67 3e-10
gi|157086399|gb|ABV16077.1| hypothetical protein CKO_05034 ... 67 3e-10
gi|146291623|ref|YP_001182047.1| conserved hypothetical pro... 67 3e-10
gi|52424108|ref|YP_087245.1| EbgC protein [Mannheimia succi... 67 4e-10
gi|124545446|ref|ZP_01704639.1| conserved hypothetical prot... 67 4e-10
gi|154505187|ref|ZP_02041925.1| hypothetical protein RUMGNA... 66 5e-10
gi|118756976|ref|ZP_01604744.1| conserved hypothetical prot... 66 6e-10
gi|56415562|ref|YP_152637.1| hypothetical protein SPA3520 [... 65 1e-09
gi|120600443|ref|YP_965017.1| conserved hypothetical protei... 65 1e-09
gi|117625859|ref|YP_859182.1| hypothetical protein APECO1_2... 65 1e-09
gi|152977953|ref|YP_001343582.1| conserved hypothetical pro... 65 2e-09
gi|16762641|ref|NP_458258.1| hypothetical protein STY4129 [... 64 2e-09
gi|75242634|ref|ZP_00726378.1| COG2731: Beta-galactosidase,... 64 2e-09
gi|153812355|ref|ZP_01965023.1| hypothetical protein RUMOBE... 64 4e-09
gi|150378726|ref|ZP_01917923.1| conserved hypothetical prot... 63 4e-09
gi|26250219|ref|NP_756259.1| Hypothetical protein yiaL [Esc... 63 5e-09
gi|16766954|ref|NP_462569.1| putative cytoplasmic protein [... 63 5e-09
gi|73912896|gb|AAZ91390.1| hypothetical protein [Neisseria ... 63 6e-09
gi|71894218|ref|YP_278326.1| hypothetical protein MS53_0196... 62 7e-09
gi|150007561|ref|YP_001302304.1| hypothetical protein BDI_0... 62 1e-08
gi|110803219|ref|YP_697514.1| hypothetical protein CPR_0177... 62 1e-08
gi|146301925|ref|YP_001196516.1| conserved hypothetical pro... 61 2e-08
gi|75229620|ref|ZP_00716159.1| COG2731: Beta-galactosidase,... 61 2e-08
gi|94993606|ref|YP_601704.1| hypothetical cytosolic protein... 61 2e-08
gi|19745387|ref|NP_606523.1| hypothetical protein spyM18_02... 61 2e-08
gi|18309169|ref|NP_561103.1| hypothetical protein CPE0187 [... 61 3e-08
gi|110799028|ref|YP_694644.1| conserved hypothetical protei... 60 3e-08
gi|75179350|ref|ZP_00699354.1| COG2731: Beta-galactosidase,... 60 3e-08
gi|54309450|ref|YP_130470.1| hypothetical protein PBPRA2282... 60 3e-08
gi|82546502|ref|YP_410449.1| hypothetical protein SBO_4195 ... 60 4e-08
gi|46580713|ref|YP_011521.1| conserved hypothetical protein... 60 4e-08
gi|38704249|ref|NP_313256.2| hypothetical protein ECs5229 [... 59 6e-08
gi|83569378|ref|ZP_00920832.1| COG2731: Beta-galactosidase,... 59 6e-08
gi|82779313|ref|YP_405662.1| hypothetical protein SDY_4270 ... 59 6e-08
gi|15804844|ref|NP_290885.1| hypothetical protein Z5864 [Es... 59 7e-08
gi|15603120|ref|NP_246192.1| hypothetical protein PM1255 [P... 59 8e-08
gi|75211330|ref|ZP_00711429.1| COG2731: Beta-galactosidase,... 59 1e-07
gi|77634904|ref|ZP_00796996.1| COG2731: Beta-galactosidase,... 58 1e-07
gi|15901515|ref|NP_346119.1| hypothetical protein SP_1680 [... 58 1e-07
gi|75197483|ref|ZP_00707553.1| COG2731: Beta-galactosidase,... 58 1e-07
gi|16123595|ref|NP_406908.1| hypothetical protein YPO3447 [... 58 2e-07
gi|31544335|ref|NP_852913.1| hypothetical protein MGA_0848 ... 58 2e-07
gi|75198101|ref|ZP_00708171.1| COG2731: Beta-galactosidase,... 58 2e-07
gi|30065461|ref|NP_839632.1| hypothetical protein S4500 [Sh... 58 2e-07
gi|50122688|ref|YP_051855.1| hypothetical protein ECA3766 [... 58 2e-07
gi|75188340|ref|ZP_00701607.1| COG2731: Beta-galactosidase,... 58 2e-07
gi|75515962|ref|ZP_00738080.1| COG2731: Beta-galactosidase,... 57 2e-07
gi|537093|gb|AAA97148.1| ORF_o153b [Escherichia coli] 57 2e-07
gi|77978586|ref|ZP_00834013.1| COG2731: Beta-galactosidase,... 57 2e-07
gi|152973130|ref|YP_001338276.1| hypothetical protein KPN_0... 57 3e-07
gi|90413667|ref|ZP_01221656.1| hypothetical protein P3TCK_0... 57 3e-07
gi|83571370|ref|ZP_00922810.1| COG2731: Beta-galactosidase,... 57 3e-07
gi|118071243|ref|ZP_01539439.1| conserved hypothetical prot... 57 4e-07
gi|156860113|gb|EDO53544.1| hypothetical protein BACUNI_028... 56 6e-07
gi|59714075|ref|YP_206850.1| hypothetical protein VFA0892 [... 56 6e-07
gi|109947665|ref|YP_664893.1| hypothetical protein Hac_1133... 56 6e-07
gi|156935590|ref|YP_001439506.1| hypothetical protein ESA_0... 56 8e-07
gi|16131447|ref|NP_418033.1| conserved protein [Escherichia... 56 8e-07
gi|16763268|ref|NP_458885.1| hypothetical protein STY4806 [... 55 1e-06
gi|62182893|ref|YP_219310.1| putative cytoplasmic protein [... 55 1e-06
gi|114564712|ref|YP_752226.1| conserved hypothetical protei... 55 1e-06
gi|16767713|ref|NP_463328.1| putative cytoplasmic protein [... 55 1e-06
gi|15611463|ref|NP_223114.1| hypothetical protein jhp0395 [... 55 2e-06
gi|50119342|ref|YP_048509.1| hypothetical protein ECA0383 [... 55 2e-06
gi|123440867|ref|YP_001004858.1| hypothetical protein YE049... 55 2e-06
gi|149001965|ref|ZP_01826919.1| hypothetical protein CGSSp1... 54 2e-06
gi|148988727|ref|ZP_01820160.1| hypothetical protein CGSSp6... 54 2e-06
gi|148984118|ref|ZP_01817413.1| hypothetical protein CGSSp3... 54 2e-06
gi|148993747|ref|ZP_01823174.1| hypothetical protein CGSSp9... 54 2e-06
gi|116515454|ref|YP_816948.1| hypothetical protein SPD_1492... 54 2e-06
gi|15641563|ref|NP_231195.1| hypothetical protein VC1555 [V... 54 3e-06
gi|146310118|ref|YP_001175192.1| conserved hypothetical pro... 54 3e-06
gi|90407239|ref|ZP_01215426.1| hypothetical cytosolic prote... 54 3e-06
gi|153891391|ref|ZP_02012409.1| conserved hypothetical prot... 54 3e-06
gi|56416239|ref|YP_153314.1| hypothetical protein SPA4268 [... 54 3e-06
gi|52426261|ref|YP_089398.1| EbgC protein [Mannheimia succi... 54 3e-06
gi|116188601|ref|ZP_01478371.1| hypothetical protein VchoM_... 53 4e-06
gi|77960169|ref|ZP_00824057.1| COG2731: Beta-galactosidase,... 53 5e-06
gi|77960003|ref|ZP_00823907.1| COG2731: Beta-galactosidase,... 52 8e-06
gi|15903567|ref|NP_359117.1| hypothetical protein spr1524 [... 52 8e-06
>gi|125716954|ref|YP_001034087.1| hypothetical protein SSA_0073 [Streptococcus sanguinis SK36]
gi|125496871|gb|ABN43537.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
Length = 150
Score = 295 bits (756), Expect = 4e-79, Method: Composition-based stats.
Identities = 150/150 (100%), Positives = 150/150 (100%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG
Sbjct: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC
Sbjct: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
Query: 121 LITFPEDLHQPKVRVNDLPLKKVVFKVAIS 150
LITFPEDLHQPKVRVNDLPLKKVVFKVAIS
Sbjct: 121 LITFPEDLHQPKVRVNDLPLKKVVFKVAIS 150
>gi|157074572|gb|ABV09255.1| conserved hypothetical protein subfamily [Streptococcus gordonii
str. Challis substr. CH1]
Length = 150
Score = 224 bits (571), Expect = 1e-57, Method: Composition-based stats.
Identities = 107/150 (71%), Positives = 132/150 (88%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+T+IN L+TYVGVNP+FE+LI FLK+ DL L EG ++I+GD +FGNCF+Y+ADG+ G
Sbjct: 1 MIITKINRLATYVGVNPHFEKLIAFLKSTDLDDLQEGSLEIDGDSIFGNCFTYLADGEAG 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
FFETH+KYLDIHLVLEN E MAV+S +S +V+Q Y++ KDI LY+GKVEQL+HL++GEC
Sbjct: 61 TFFETHQKYLDIHLVLENEEAMAVTSPESVSVTQEYDENKDIALYKGKVEQLVHLRAGEC 120
Query: 121 LITFPEDLHQPKVRVNDLPLKKVVFKVAIS 150
LITFPEDLHQPKVRVND P+KKVVFKVAIS
Sbjct: 121 LITFPEDLHQPKVRVNDDPVKKVVFKVAIS 150
>gi|148993735|ref|ZP_01823162.1| hypothetical protein CGSSp9BS68_02398 [Streptococcus pneumoniae
SP9-BS68]
gi|147927691|gb|EDK78715.1| hypothetical protein CGSSp9BS68_02398 [Streptococcus pneumoniae
SP9-BS68]
Length = 150
Score = 221 bits (564), Expect = 8e-57, Method: Composition-based stats.
Identities = 106/150 (70%), Positives = 131/150 (87%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+T+I+ L TYVGVNP+F LI+FL+ L +L EG I I+G++LFGNCF+Y+ADGQ G
Sbjct: 1 MIITKISRLGTYVGVNPHFATLIDFLEKTGLENLTEGSIAIDGNRLFGNCFTYLADGQAG 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
DFFETH+KYLDIHLVLEN E MAV+S ++ +V+Q Y++EKDIELY GKVEQL+HL++GEC
Sbjct: 61 DFFETHQKYLDIHLVLENEEAMAVTSPENVSVTQEYDEEKDIELYTGKVEQLVHLRAGEC 120
Query: 121 LITFPEDLHQPKVRVNDLPLKKVVFKVAIS 150
LITFPEDLHQPKVR+ND P+KKVVFKVAIS
Sbjct: 121 LITFPEDLHQPKVRINDEPVKKVVFKVAIS 150
>gi|15901526|ref|NP_346130.1| hypothetical protein SP_1691 [Streptococcus pneumoniae TIGR4]
gi|15903578|ref|NP_359128.1| hypothetical protein spr1535 [Streptococcus pneumoniae R6]
gi|111658530|ref|ZP_01409193.1| hypothetical protein SpneT_02000286 [Streptococcus pneumoniae
TIGR4]
gi|116515591|ref|YP_816959.1| hypothetical protein SPD_1503 [Streptococcus pneumoniae D39]
gi|148984132|ref|ZP_01817427.1| hypothetical protein CGSSp3BS71_02887 [Streptococcus pneumoniae
SP3-BS71]
gi|148997743|ref|ZP_01825307.1| hypothetical protein CGSSp11BS70_02509 [Streptococcus pneumoniae
SP11-BS70]
gi|149011446|ref|ZP_01832693.1| hypothetical protein CGSSp19BS75_08547 [Streptococcus pneumoniae
SP19-BS75]
gi|149021214|ref|ZP_01835460.1| hypothetical protein CGSSp23BS72_00270 [Streptococcus pneumoniae
SP23-BS72]
gi|1163111|gb|AAC44392.1| ORF-1
gi|14973185|gb|AAK75770.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
gi|15459199|gb|AAL00339.1| Hypothetical protein [Streptococcus pneumoniae R6]
gi|116076167|gb|ABJ53887.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
gi|147756242|gb|EDK63284.1| hypothetical protein CGSSp11BS70_02509 [Streptococcus pneumoniae
SP11-BS70]
gi|147764436|gb|EDK71367.1| hypothetical protein CGSSp19BS75_08547 [Streptococcus pneumoniae
SP19-BS75]
gi|147923421|gb|EDK74534.1| hypothetical protein CGSSp3BS71_02887 [Streptococcus pneumoniae
SP3-BS71]
gi|147930315|gb|EDK81299.1| hypothetical protein CGSSp23BS72_00270 [Streptococcus pneumoniae
SP23-BS72]
Length = 150
Score = 219 bits (559), Expect = 3e-56, Method: Composition-based stats.
Identities = 105/150 (70%), Positives = 130/150 (86%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+T+I+ L TYVGVNP+F LI+FL+ L +L EG I I+G++LFGNCF+Y+ADGQ G
Sbjct: 1 MIITKISRLGTYVGVNPHFATLIDFLEKTGLENLTEGSIAIDGNRLFGNCFTYLADGQAG 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
FFETH+KYLDIHLVLEN E MAV+S ++ +V+Q Y++EKDIELY GKVEQL+HL++GEC
Sbjct: 61 AFFETHQKYLDIHLVLENEEAMAVTSPENVSVTQEYDEEKDIELYTGKVEQLVHLRAGEC 120
Query: 121 LITFPEDLHQPKVRVNDLPLKKVVFKVAIS 150
LITFPEDLHQPKVR+ND P+KKVVFKVAIS
Sbjct: 121 LITFPEDLHQPKVRINDEPVKKVVFKVAIS 150
>gi|148988741|ref|ZP_01820174.1| hypothetical protein CGSSp6BS73_09454 [Streptococcus pneumoniae
SP6-BS73]
gi|147925942|gb|EDK77017.1| hypothetical protein CGSSp6BS73_09454 [Streptococcus pneumoniae
SP6-BS73]
Length = 150
Score = 219 bits (558), Expect = 4e-56, Method: Composition-based stats.
Identities = 105/150 (70%), Positives = 130/150 (86%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+T+I+ L TYVGVNP+F LI+FL+ L +L EG I I+GD+LFGNCF+Y+ADGQ G
Sbjct: 1 MIITKISRLGTYVGVNPHFATLIDFLEKTGLENLTEGSIAIDGDRLFGNCFTYLADGQAG 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
FFETH+KYLDIHLVLEN E MAV+S ++ +V+Q Y++EKDIELY G+VEQL+HL++GEC
Sbjct: 61 AFFETHQKYLDIHLVLENEEAMAVTSPENVSVTQEYDEEKDIELYTGEVEQLVHLRAGEC 120
Query: 121 LITFPEDLHQPKVRVNDLPLKKVVFKVAIS 150
LITFPEDLHQPKVR+ND P+KKVVFKVAIS
Sbjct: 121 LITFPEDLHQPKVRINDEPVKKVVFKVAIS 150
>gi|149006766|ref|ZP_01830452.1| hypothetical protein CGSSp18BS74_05892 [Streptococcus pneumoniae
SP18-BS74]
gi|147761681|gb|EDK68645.1| hypothetical protein CGSSp18BS74_05892 [Streptococcus pneumoniae
SP18-BS74]
Length = 150
Score = 219 bits (558), Expect = 4e-56, Method: Composition-based stats.
Identities = 105/150 (70%), Positives = 130/150 (86%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+T+I+ L TYVGVNP+F LI+FL+ L +L EG I I+G++LFGNCF+Y+ADGQ G
Sbjct: 1 MIITKISRLGTYVGVNPHFATLIDFLEKTGLENLTEGSIAIDGNRLFGNCFTYLADGQAG 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
FFETH+KYLDIHLVLEN E MAV+S ++ +V+Q Y++EKDIELY GKVEQL+HL++GEC
Sbjct: 61 AFFETHQKYLDIHLVLENEEAMAVTSPENISVTQEYDEEKDIELYTGKVEQLVHLRAGEC 120
Query: 121 LITFPEDLHQPKVRVNDLPLKKVVFKVAIS 150
LITFPEDLHQPKVR+ND P+KKVVFKVAIS
Sbjct: 121 LITFPEDLHQPKVRINDEPVKKVVFKVAIS 150
>gi|149001981|ref|ZP_01826935.1| hypothetical protein CGSSp14BS69_09731 [Streptococcus pneumoniae
SP14-BS69]
gi|149004297|ref|ZP_01829068.1| hypothetical protein CGSSp14BS69_10728 [Streptococcus pneumoniae
SP14-BS69]
gi|147757730|gb|EDK64745.1| hypothetical protein CGSSp14BS69_10728 [Streptococcus pneumoniae
SP14-BS69]
gi|147759790|gb|EDK66780.1| hypothetical protein CGSSp14BS69_09731 [Streptococcus pneumoniae
SP14-BS69]
Length = 150
Score = 216 bits (549), Expect = 4e-55, Method: Composition-based stats.
Identities = 105/150 (70%), Positives = 129/150 (86%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+T+I+ L TYVGVNP+F LI+FL+ L +L EG I I+G++LFGNCF+Y+ADGQ G
Sbjct: 1 MIITKISRLGTYVGVNPHFATLIDFLEKTGLENLTEGSIAIDGNRLFGNCFTYLADGQAG 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
FFETH+KYLDIHLVLEN E MAV+S ++ +V+Q Y+KEKDIELY GKVEQL+HL++GE
Sbjct: 61 AFFETHQKYLDIHLVLENEEAMAVTSPENVSVTQEYDKEKDIELYTGKVEQLVHLRAGEY 120
Query: 121 LITFPEDLHQPKVRVNDLPLKKVVFKVAIS 150
LITFPEDLHQPKVR+ND P+KKVVFKVAIS
Sbjct: 121 LITFPEDLHQPKVRINDEPVKKVVFKVAIS 150
>gi|15901181|ref|NP_345785.1| hypothetical protein SP_1327 [Streptococcus pneumoniae TIGR4]
gi|111658083|ref|ZP_01408783.1| hypothetical protein SpneT_02000734 [Streptococcus pneumoniae
TIGR4]
gi|148994731|ref|ZP_01823815.1| hypothetical protein CGSSp9BS68_10530 [Streptococcus pneumoniae
SP9-BS68]
gi|148999025|ref|ZP_01826458.1| hypothetical protein CGSSp11BS70_06900 [Streptococcus pneumoniae
SP11-BS70]
gi|14972809|gb|AAK75425.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
gi|147755148|gb|EDK62202.1| hypothetical protein CGSSp11BS70_06900 [Streptococcus pneumoniae
SP11-BS70]
gi|147927062|gb|EDK78103.1| hypothetical protein CGSSp9BS68_10530 [Streptococcus pneumoniae
SP9-BS68]
Length = 152
Score = 153 bits (386), Expect = 4e-36, Method: Composition-based stats.
Identities = 74/147 (50%), Positives = 103/147 (70%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI++E ++ Y VN YF ++ +FL+ +L L +GKIDI+G+ +F NC +Y+ADG PG
Sbjct: 1 MIISEQSDFKRYASVNKYFSKVCDFLENTNLTDLVDGKIDIDGENVFANCMTYLADGVPG 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
D FETH+KYLDIH+V+ENTE MAV+S P+++EKDI Y+ K Q++ L G
Sbjct: 61 DIFETHKKYLDIHIVVENTEKMAVTSPVRAQSRVPFSEEKDIAFYDSKDYQIVELLPGNM 120
Query: 121 LITFPEDLHQPKVRVNDLPLKKVVFKV 147
L+TF EDLHQPK+ ND +KK+V KV
Sbjct: 121 LVTFEEDLHQPKIHCNDETVKKLVIKV 147
>gi|90962907|ref|YP_536822.1| hypothetical protein LSL_1935 [Lactobacillus salivarius subsp.
salivarius UCC118]
gi|90822101|gb|ABE00739.1| Conserved hypothetical protein [Lactobacillus salivarius subsp.
salivarius UCC118]
Length = 149
Score = 142 bits (358), Expect = 6e-33, Method: Composition-based stats.
Identities = 70/149 (46%), Positives = 97/149 (65%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ I +L Y ++ ++ FL+ ++L S+ G DI+ + + G+C YVADG PG
Sbjct: 1 MIIANIKDLDRYSSLSNNMDKACQFLQNLNLDSVKVGSFDIDDNNVNGSCIEYVADGVPG 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
FE H Y+DIHL + E MA+SS S V Q Y++EKDI ++G+VEQL+ L G C
Sbjct: 61 KMFENHENYIDIHLTVAGIEQMAISSYDSVQVIQDYDEEKDIAFFQGEVEQLVKLYPGNC 120
Query: 121 LITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
L+TFPEDLHQPKVR +D ++KVV KV I
Sbjct: 121 LVTFPEDLHQPKVRYDDNLVRKVVLKVKI 149
>gi|15894123|ref|NP_347472.1| Putative beta-D-galactosidase [Clostridium acetobutylicum ATCC 824]
gi|15023728|gb|AAK78812.1|AE007599_8 Putative beta-D-galactosidase [Clostridium acetobutylicum ATCC 824]
Length = 152
Score = 89.7 bits (221), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/152 (34%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV ++ N S YV +N ER FLK D+ L +GK +I+ D ++ + SY +
Sbjct: 1 MIVDKLENASLYVNMNKEMERAFEFLKNTDIQKLSDGKYEIDSDNVYASVQSYETKDKSE 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSGE 119
FE+H KY+DI +++ E + S +++ +V + Y+ EKD+ Y +GK+ I+L+
Sbjct: 61 KKFESHEKYIDIQYIVKGKEFIEWSPIQNLSVEEAYSDEKDVIFYKDGKLSSKINLEDNY 120
Query: 120 CLITFPEDLHQPKVRVND-LPLKKVVFKVAIS 150
I FP D H+P + + +KKVV K+ IS
Sbjct: 121 FCIFFPNDGHKPGCTFDKPMNIKKVVLKIKIS 152
>gi|156862256|gb|EDO55687.1| hypothetical protein BACUNI_00720 [Bacteroides uniformis ATCC 8492]
Length = 148
Score = 89.7 bits (221), Expect = 5e-17, Method: Composition-based stats.
Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 3/148 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
M++ + N+ Y ++P FE+ I+FLK+ DL SL GK +++G L N +
Sbjct: 1 MVIDRLENIEKYTLLHPLFEQAIDFLKSHDLHSLEIGKTELKGKDLLVNVAQTNPKEKEN 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKST-TVSQPYNKEKDIELYEGKVEQLIHLKSGE 119
ETH+ Y+DI + L TE M ++ + V PYN EKDI +EG E I +K G
Sbjct: 61 AKLETHKDYIDIQIPLSGTEIMGYTAAQDCLPVDAPYNAEKDITFFEGLAEDYIAVKPGM 120
Query: 120 CLITFPEDLHQPKVRVNDLPLKKVVFKV 147
I FP+D H P + + +KK++ KV
Sbjct: 121 FAIFFPQDGHAPGITPDG--VKKIIVKV 146
>gi|156110256|gb|EDO12001.1| hypothetical protein BACOVA_02502 [Bacteroides ovatus ATCC 8483]
Length = 148
Score = 85.9 bits (211), Expect = 6e-16, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
M+V + NL Y +NP F + I FLK+ DL ++ GK +++G L N +
Sbjct: 1 MVVDTLENLEKYASLNPLFAQAIEFLKSHDLQAMEVGKTELKGKDLLVNIAQTKPKTKEE 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTT-VSQPYNKEKDIELYEGKVEQLIHLKSGE 119
ETH +++DI + L TE M ++ K PYN EKDI +EG E + +K G
Sbjct: 61 AKLETHNEFIDIQIPLSGTEIMGYTAAKDCVPADAPYNAEKDITFFEGLAETYVAVKPGM 120
Query: 120 CLITFPEDLHQPKV 133
I FP+D H P +
Sbjct: 121 FAIFFPQDGHAPGI 134
>gi|153806407|ref|ZP_01959075.1| hypothetical protein BACCAC_00670 [Bacteroides caccae ATCC 43185]
gi|149131084|gb|EDM22290.1| hypothetical protein BACCAC_00670 [Bacteroides caccae ATCC 43185]
Length = 148
Score = 85.5 bits (210), Expect = 9e-16, Method: Composition-based stats.
Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
M+V + NL Y +NP F + I FLK+ DL ++ GK +++G L N +
Sbjct: 1 MVVDTLENLEKYASLNPLFAQAIEFLKSHDLQAMEIGKTELKGKDLLVNIAQTKPKTKEE 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTT-VSQPYNKEKDIELYEGKVEQLIHLKSGE 119
ETH +++DI + L TE M ++ K + PYN EKDI +EG E I +K G
Sbjct: 61 AKLETHNEFIDIQIPLSGTEIMGYTAAKDCVPTNAPYNVEKDITFFEGLAETYIAVKPGM 120
Query: 120 CLITFPEDLHQPKV 133
I FP+D H P +
Sbjct: 121 FAIFFPQDGHAPGI 134
>gi|29346180|ref|NP_809683.1| hypothetical protein BT_0770 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338075|gb|AAO75877.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 148
Score = 84.3 bits (207), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
M+V + NL Y +NP F + I FLK+ DL ++ GK +++G L N +
Sbjct: 1 MVVDTLENLEKYASLNPLFAQAIEFLKSHDLQAMEIGKTELKGKDLLVNIAQTKPKTKEE 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTT-VSQPYNKEKDIELYEGKVEQLIHLKSGE 119
ETH +++DI + L TE M ++ K PYN EKDI +EG E + +K G
Sbjct: 61 AKLETHNEFIDIQIPLSGTEVMGYTAAKDCVPADAPYNVEKDITFFEGLAETYVAVKPGM 120
Query: 120 CLITFPEDLHQPKV 133
I FP+D H P +
Sbjct: 121 FAIFFPQDGHAPGI 134
>gi|153890946|ref|ZP_02011996.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
gi|151582989|gb|EDN46492.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
Length = 156
Score = 79.7 bits (195), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVAD--GQ 58
MI + N Y G++P F+ ++L+ D + P+G+ DI+GD+++ SY
Sbjct: 1 MIFDTLANARRYAGLHPGFDASFDYLRRFDHAT-PDGRHDIDGDRIYALVQSYETRPAEA 59
Query: 59 PGDFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQ---LIHL 115
P FFETHR+Y+DI ++ E + T Q Y+ ++D+ LY + + L
Sbjct: 60 PDKFFETHRRYIDIQYLVAGEEAIPCVPAARLTTQQTYDAQRDLLLYTDCMHETPALSEF 119
Query: 116 KSGECLITFPEDLHQPKVRV---NDLPLKKVVFKVAI 149
G+ I FPED H+P + + ++K+V K+ +
Sbjct: 120 CPGDFAIYFPEDAHKPGCTLRPGHSANVRKIVIKIVV 156
>gi|53712998|ref|YP_098990.1| hypothetical protein BF1709 [Bacteroides fragilis YCH46]
gi|52215863|dbj|BAD48456.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 148
Score = 79.0 bits (193), Expect = 9e-14, Method: Composition-based stats.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV+ + N G++P F+ L +++KT DL G+I+I+GD LF N + +
Sbjct: 1 MIVSNLQNSQRVEGLHPLFKTLFDYVKTHDLFHAELGRIEIDGDNLFINNVNPECVARDK 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVS-QPYNKEKDIELYEGKVEQLIHLKSGE 119
E HR Y+D+H++LE TE + +++ +PY D LY + L G+
Sbjct: 61 QVLELHRDYIDVHILLEGTETIGWKAIEDLKDEVKPYEANGDCALYSDAPTTFVDLLPGQ 120
Query: 120 CLITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
+I +PED H P + ++K++ KV +
Sbjct: 121 FMIVYPEDPHAP--LIGQGKIRKLIAKVKL 148
>gi|150005827|ref|YP_001300571.1| hypothetical protein BVU_3323 [Bacteroides vulgatus ATCC 8482]
gi|149934251|gb|ABR40949.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 146
Score = 77.8 bits (190), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
M+V + NL Y +NP F + + +LKT DL + GK+ ++GD L N +
Sbjct: 1 MVVDRLENLEKYASLNPLFAKAMEYLKTTDLNAQELGKVKLQGDDLVVNFSQTKPKTKEE 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
ETH +++DI + L E M ++ + Y+ +KDI Y G E I +K G
Sbjct: 61 AKLETHNQFIDIQIPLSGVEVMGYTA-REDLPEADYDADKDISFYPGLAESYIPVKPGMF 119
Query: 121 LITFPEDLHQPKV 133
I FP+D H P V
Sbjct: 120 AIFFPQDAHAPGV 132
>gi|123441692|ref|YP_001005676.1| hypothetical protein YE1361 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088653|emb|CAL11452.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 155
Score = 76.6 bits (187), Expect = 4e-13, Method: Composition-based stats.
Identities = 49/142 (34%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 16 NPYF----ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQP--GDFFETHRKY 69
NP + R + + +DL +LP G++DIEG +++ N +A +P E HR Y
Sbjct: 12 NPLYPDAIRRTLAAISKMDLANLPAGELDIEGREIYLN--HIIASSKPVYEQAPELHRYY 69
Query: 70 LDIHLVLENTEDMAVS-SVKSTTVSQPYNKEKDIELYEG-KVEQLIHLKSGECLITFPED 127
+DIH++LE +E + S S + + ++ E+D L+EG E L+ L G+ + FP +
Sbjct: 70 IDIHILLEGSEVIGASPSAQGQRPTMDFDSERDYGLFEGITTETLLTLAPGDIALLFPGE 129
Query: 128 LHQPKVRVNDL-PLKKVVFKVA 148
LH+P + D+ PL+K+V KVA
Sbjct: 130 LHRPMGTLGDVAPLRKIVVKVA 151
>gi|34764909|ref|ZP_00145259.1| Protein yjgK [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27885749|gb|EAA23141.1| Protein yjgK [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 151
Score = 76.3 bits (186), Expect = 5e-13, Method: Composition-based stats.
Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 4/152 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI E+ N+ TY G++ ++ I+F+ + GK I+GD ++ NC +
Sbjct: 1 MIYAELKNIKTYKGISKNLDKAIDFIVGKKYLNANFGKNIIDGDAVYFNCPEKPITRENT 60
Query: 61 DF-FETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGE 119
+ E H+KY+DIH+VLE E +A + ++ +Q YN E+D L +GK + + L +
Sbjct: 61 NLDLEYHKKYIDIHIVLEGEEVIAYTPLEDCLETQSYNDEEDYALVKGKAQVELILNAKN 120
Query: 120 CLITFPEDLHQPKVRVNDLP--LKKVVFKVAI 149
L+ FPE+ H +++ D P +KKV+FKV I
Sbjct: 121 FLLFFPEEPHLALLKI-DTPKEIKKVIFKVEI 151
>gi|19704469|ref|NP_604031.1| Hypothetical cytosolic protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19714737|gb|AAL95330.1| Hypothetical cytosolic protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 155
Score = 76.3 bits (186), Expect = 6e-13, Method: Composition-based stats.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI ++ N+ TY G+N ++ I+F+ + GK IEGD ++ NC +
Sbjct: 5 MIYAKLKNIKTYKGINKNLDKAIDFIIEKKYLNASFGKNIIEGDSIYFNCPEKPVTRENT 64
Query: 61 DF-FETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGE 119
D E H+KY+DIH+VLE E++ + + +Q YN E D L +GK + +
Sbjct: 65 DLELEYHKKYIDIHIVLEGEENIVYTPFEDCIETQSYNIEGDYGLVKGKAQVEFIMNPKN 124
Query: 120 CLITFPEDLHQPKVRVNDLP--LKKVVFKVAI 149
L+ FPE+ H ++V D P +KK++FKV I
Sbjct: 125 FLLFFPEEPHLALLKV-DTPKEIKKIIFKVEI 155
>gi|74318447|ref|YP_316187.1| Conserved hypothetical protein 22 [Thiobacillus denitrificans ATCC
25259]
gi|74057942|gb|AAZ98382.1| Conserved hypothetical protein 22 [Thiobacillus denitrificans ATCC
25259]
Length = 152
Score = 75.9 bits (185), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 7/152 (4%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ + + Y+ ++P F FL+ DL +L G + GD +F + +
Sbjct: 1 MILAPLAHAERYLALHPLFSEAFAFLRRFDLDTLAPGIHAVRGDSVFAIVEAAEGRTREA 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQP---YNKEKDIELYEGKVEQLIHLKS 117
E+HR+Y+DI L+LE ++M + + QP +++++DI + + +
Sbjct: 61 ARLESHRRYIDIQLILEGVDEMGWRPL--SQCRQPLGDHDEDRDIRFFADAPATWVAAHA 118
Query: 118 GECLITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
G + FPED H P V PL+KVV KVA+
Sbjct: 119 GMFCVFFPEDAHAPLVSSG--PLRKVVMKVAV 148
>gi|83319313|ref|YP_424392.1| conserved hypothetical cytosolic protein [Mycoplasma capricolum
subsp. capricolum ATCC 27343]
gi|83283199|gb|ABC01131.1| conserved hypothetical cytosolic protein [Mycoplasma capricolum
subsp. capricolum ATCC 27343]
Length = 149
Score = 75.1 bits (183), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI +I+NL+ Y+ ++ + I F++ DL SL +G I++ DKLF N F+
Sbjct: 1 MIYDKISNLNRYLNIHKNIDLAIKFIQEHDLKSLKDG-INVINDKLFYNKFTTKTLDIND 59
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
FE+H KYLD+H+++ E + V YN++ D+ LY+ K + I+
Sbjct: 60 AIFESHDKYLDLHIIISGDEYIGHEFVSDLKEQVLYNQKDDVYLYKTKTTKTIYQNDQSF 119
Query: 121 LITFPEDLHQPKVRVNDLPLKKVVFKV 147
+ F D H PK++ N + K+VFK+
Sbjct: 120 SLFFSTDAHSPKIKANFNQITKIVFKI 146
>gi|91791843|ref|YP_561494.1| conserved hypothetical protein 22 [Shewanella denitrificans OS217]
gi|91713845|gb|ABE53771.1| conserved hypothetical protein 22 [Shewanella denitrificans OS217]
Length = 154
Score = 74.3 bits (181), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV + N Y G++P E +N + + D LP G I+GD +F Y +
Sbjct: 1 MIVDTLANHHLYHGLHPRLEVALNHIASTDFSPLPVGNYPIDGDNIFVIVNDYHTKPRQV 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQ----LIHLK 116
+ FE H+KY+D+ V+ E+ + T S+PY ++ D ++ + + I LK
Sbjct: 61 EPFEVHQKYIDVQFVVSGEEEFGYLPLADQTPSKPYYEKHDYAEFDYESNKANAAFIPLK 120
Query: 117 SGECLITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
+G + FP D+H P ++KVV KV I
Sbjct: 121 TGMFALFFPGDMHMPGTSSEPALVRKVVIKVKI 153
>gi|153806822|ref|ZP_01959490.1| hypothetical protein BACCAC_01096 [Bacteroides caccae ATCC 43185]
gi|149131499|gb|EDM22705.1| hypothetical protein BACCAC_01096 [Bacteroides caccae ATCC 43185]
Length = 148
Score = 73.9 bits (180), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV+ + N G++P F+ L +++KT DL G+I+++GD LF N +
Sbjct: 1 MIVSNLQNSQRIEGLHPLFKSLFDYVKTHDLLHADLGRIEVDGDHLFINNVNPECVTSDQ 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKS-TTVSQPYNKEKDIELYEGKVEQLIHLKSGE 119
E H Y+D+H++LE E + +++ ++ Y+KE+D LY + + L G+
Sbjct: 61 QVLELHHDYIDVHILLEGEEMIGWKALEDLQNETKAYSKEEDCALYSDRPTTYVSLLPGQ 120
Query: 120 CLITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
+I +PED H P + ++K++ KV +
Sbjct: 121 FVIVYPEDPHAPVIGSGK--IRKLIAKVKL 148
>gi|154492252|ref|ZP_02031878.1| hypothetical protein PARMER_01886 [Parabacteroides merdae ATCC
43184]
gi|154087477|gb|EDN86522.1| hypothetical protein PARMER_01886 [Parabacteroides merdae ATCC
43184]
Length = 150
Score = 73.9 bits (180), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ +NN ++P F++ ++LK+ D + +GK +++G +L+ + S +
Sbjct: 1 MILDSLNNTKKIECLHPLFKKAFDYLKSTDFSKVEDGKHELDGSRLYVSVVSIFGKEKKD 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVS-SVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGE 119
ETH+KY+DI + L E + + S PYN++KDI Y + + G+
Sbjct: 61 AAIETHKKYIDIQMPLLGVEKIGWKPGCELQEESTPYNEQKDIAFYIDRPTAYTKIYPGQ 120
Query: 120 CLITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
I FPED H P + + ++KV+ KV +
Sbjct: 121 FAIYFPEDGHAPGIGQGN--IRKVIVKVQV 148
>gi|24375674|ref|NP_719717.1| hypothetical protein SO_4189 [Shewanella oneidensis MR-1]
gi|24350596|gb|AAN57161.1|AE015851_2 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 153
Score = 73.9 bits (180), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV + N Y ++P + L T D LP G ++GD +F Y Q
Sbjct: 1 MIVDTLANRHIYQSLSPRIATALAHLATTDFSQLPVGNYPLDGDNIFVIVNDYQTKPQST 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYE----GKVEQLIHLK 116
+ FE H+KY+D+ V+ E+ + T S+PY + D ++ K I LK
Sbjct: 61 EPFEVHQKYIDVQYVVSGEEEFGYLPLADQTPSKPYFDKHDYAEFDYESNKKNASYIQLK 120
Query: 117 SGECLITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
+G + FP D+H P + + ++KVV KV I
Sbjct: 121 AGMFALFFPGDMHMPGTSDSPVAVRKVVIKVKI 153
>gi|60681209|ref|YP_211353.1| hypothetical protein BF1715 [Bacteroides fragilis NCTC 9343]
gi|60492643|emb|CAH07415.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
Length = 148
Score = 73.6 bits (179), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV+ + N ++P F+ L +++KT DL G+I+I+GD LF N + +
Sbjct: 1 MIVSNLQNSQRVERLHPLFKTLFDYVKTHDLFHAELGRIEIDGDNLFINNVNPECVARDK 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVS-QPYNKEKDIELYEGKVEQLIHLKSGE 119
E HR Y+D+H++LE E + +++ +PY D LY + L G+
Sbjct: 61 QVLELHRDYIDVHILLEGIETIGWKAIEDLKDEVKPYEANGDCALYSDAPTTFVDLLPGQ 120
Query: 120 CLITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
+I +PED H P + ++K++ KV +
Sbjct: 121 FMIVYPEDPHAP--LIGQGKIRKLIAKVKL 148
>gi|77975464|ref|ZP_00830999.1| COG2731: Beta-galactosidase, beta subunit [Yersinia frederiksenii
ATCC 33641]
Length = 155
Score = 72.4 bits (176), Expect = 7e-12, Method: Composition-based stats.
Identities = 51/157 (32%), Positives = 87/157 (55%), Gaps = 15/157 (9%)
Query: 1 MIVTEINNLSTYVGVNPYF----ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVAD 56
MI+ E+ N NP + R + + +DL +LP G+ +IEG +++ N +A+
Sbjct: 1 MILDELKNAVN----NPLYPDAIRRTLVAISNMDLANLPAGEQEIEGREIYLN--HIIAN 54
Query: 57 GQP--GDFFETHRKYLDIHLVLENTEDMAVS-SVKSTTVSQPYNKEKDIELYEG-KVEQL 112
+P E HR Y+DIH++LE E + S S + + ++ E+D L+EG E L
Sbjct: 55 SKPLYEQAPELHRYYIDIHILLEGNEVIGASPSAQGQRPTMDFDTERDYGLFEGISTETL 114
Query: 113 IHLKSGECLITFPEDLHQPKVRVNDL-PLKKVVFKVA 148
+ L G+ ++ FP +LH+P + ++ PL+K+V KVA
Sbjct: 115 LTLAPGDIVLLFPGELHRPMGTLAEVAPLRKIVVKVA 151
>gi|16122759|ref|NP_406072.1| hypothetical protein YPO2541 [Yersinia pestis CO92]
gi|45442141|ref|NP_993680.1| hypothetical protein YP_2352 [Yersinia pestis biovar Microtus str.
91001]
gi|51596892|ref|YP_071083.1| hypothetical protein YPTB2573 [Yersinia pseudotuberculosis IP
32953]
gi|77636584|ref|ZP_00798657.1| COG2731: Beta-galactosidase, beta subunit [Yersinia pestis Angola]
gi|89105738|ref|ZP_01178252.1| COG2731: Beta-galactosidase, beta subunit [Yersinia pestis biovar
Orientalis str. IP275]
gi|108808028|ref|YP_651944.1| hypothetical protein YPA_2033 [Yersinia pestis Antiqua]
gi|108812298|ref|YP_648065.1| hypothetical protein YPN_2136 [Yersinia pestis Nepal516]
gi|145599231|ref|YP_001163307.1| hypothetical protein YPDSF_1951 [Yersinia pestis Pestoides F]
gi|149365553|ref|ZP_01887588.1| hypothetical protein YPE_0721 [Yersinia pestis CA88-4125]
gi|153947754|ref|YP_001400446.1| hypothetical protein YpsIP31758_1468 [Yersinia pseudotuberculosis
IP 31758]
gi|45437005|gb|AAS62557.1| conserved hypothetical protein [Yersinia pestis biovar Microtus
str. 91001]
gi|51590174|emb|CAH21811.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|108775946|gb|ABG18465.1| hypothetical protein YPN_2136 [Yersinia pestis Nepal516]
gi|108779941|gb|ABG13999.1| hypothetical protein YPA_2033 [Yersinia pestis Antiqua]
gi|115348238|emb|CAL21166.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145210927|gb|ABP40334.1| hypothetical protein YPDSF_1951 [Yersinia pestis Pestoides F]
gi|149291966|gb|EDM42040.1| hypothetical protein YPE_0721 [Yersinia pestis CA88-4125]
gi|152959249|gb|ABS46710.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
31758]
Length = 155
Score = 72.4 bits (176), Expect = 8e-12, Method: Composition-based stats.
Identities = 48/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 16 NPYF----ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQP--GDFFETHRKY 69
NP + R + + +DL +LP G+++IEG +++ N +A +P E HR Y
Sbjct: 12 NPIYPEVIRRTLAAISQMDLAALPAGELEIEGREIYLN--HMIATTKPLYEQRPELHRYY 69
Query: 70 LDIHLVLENTEDMAVS-SVKSTTVSQPYNKEKDIELYEG-KVEQLIHLKSGECLITFPED 127
+DIH++LE +E + S S + + ++ EKD L+EG E L+ L G+ + FP +
Sbjct: 70 IDIHILLEGSEVIGASPSTQGQRPTMDFDSEKDYGLFEGMSTETLLTLAPGDIALLFPGE 129
Query: 128 LHQPKVRVND-LPLKKVVFKVA 148
LH+P + D P++K+V KVA
Sbjct: 130 LHRPMGTLTDPAPIRKLVVKVA 151
>gi|54020358|ref|YP_115650.1| hypothetical protein mhp136 [Mycoplasma hyopneumoniae 232]
gi|53987531|gb|AAV27732.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232]
Length = 194
Score = 72.4 bits (176), Expect = 8e-12, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI +I N Y +N F +L FLK +L +P GK I+G+K+F +
Sbjct: 44 MIYDKIENFDRYSFLNKNFAKLAVFLKENNLNEIPLGKTQIDGNKIFVINVDVTSFDDTN 103
Query: 61 DFFETHRKYLDIHLVLENTEDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSG 118
+E HR+Y D+H+VL+ E S K Y+++ D+ Y + LI G
Sbjct: 104 ALYEYHRRYADVHIVLDEEEQYFFDFSEKLINKISDYSEKDDVAFYAKDSTRNLIKPLKG 163
Query: 119 ECLITFPEDLHQPKVRVNDLPLKKVVFKV 147
E LI FP D H PK ++K++FKV
Sbjct: 164 EFLIFFPGDAHLPKYTGKISTIRKMIFKV 192
>gi|149197626|ref|ZP_01874676.1| hypothetical protein LNTAR_20373 [Lentisphaera araneosa HTCC2155]
gi|149139196|gb|EDM27599.1| hypothetical protein LNTAR_20373 [Lentisphaera araneosa HTCC2155]
Length = 149
Score = 71.6 bits (174), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ + Y +NP F +L DL L GK I+GD++F + +
Sbjct: 1 MILCTFEEIENYACLNPRFATAAKWLLDQDLDKLAFGKTIIDGDEIFAIKETLAGRKEDK 60
Query: 61 DFFETHRKYLDIHLVLENTEDMA-VSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGE 119
E H+KY+DI + L+ +++ ++ + TV Q Y +EKDI Y K Q I + +
Sbjct: 61 ANLEAHKKYIDIQICLQGRDNIRWKANSECQTVLQDYCEEKDIIFYMDKSVQSIQIYDDK 120
Query: 120 CLITFPEDLHQPKVRVNDLPLKKVVFKVAIS 150
I FPED H P + D L K+V KV ++
Sbjct: 121 AAIFFPEDAHAP--LIADEELTKLVIKVLVN 149
>gi|78776452|ref|YP_392767.1| hypothetical protein Tmden_0251 [Thiomicrospira denitrificans ATCC
33889]
gi|78496992|gb|ABB43532.1| conserved hypothetical protein [Thiomicrospira denitrificans ATCC
33889]
Length = 154
Score = 70.9 bits (172), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 1 MIVTEINNLSTYVGVNPY---FERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADG 57
M++ +I N Y P+ ++R FL ++ + K +I+GD+++ SY
Sbjct: 1 MVIDKIENWQKY----PFGEAWQRAFTFLNSLT-SETKDAKYEIQGDEIYAIVMSYETLL 55
Query: 58 QPGDFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELY--EGKVEQLIHL 115
+ E+H+KY+DI L E S S V +PY +KDIE Y E K ++++
Sbjct: 56 REDAMLESHKKYIDIQATLRGVEAYECHSRDSLVVKKPYEAQKDIEFYQTEAKPHSILNI 115
Query: 116 KSGECLITFPEDLHQPKVRVNDLP--LKKVVFKV 147
G+ ++ +P D H P + V+D +KKVV K+
Sbjct: 116 SVGDFVMFYPYDAHMPCLSVDDKKELIKKVVIKI 149
>gi|98989862|gb|ABF60035.1| YiaL [Klebsiella pneumoniae]
Length = 154
Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 11/137 (8%)
Query: 20 ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSY----VADGQPGDFFETHRKYLDIHLV 75
ER ++FL++ D + P G ++I+G +F VA+ +P E HR+YLDI +
Sbjct: 19 ERALDFLRSTDSANWPRGVVEIDGQNIFAQIIDLTTREVAENRP----EVHRRYLDIQFL 74
Query: 76 LENTEDMAVS-SVKSTTVSQPYNKEKDIELYEG-KVEQLIHLKSGECLITFPEDLHQPKV 133
E + + + T+S+ ++DI Y G + E + + G +I FP+D+H+P
Sbjct: 75 AWGEEKIGFAIDNGNNTISESLLAQRDIIFYHGCENESFLEMIPGSYVIFFPQDVHRPGC 134
Query: 134 RVN-DLPLKKVVFKVAI 149
+ P++K+V KVAI
Sbjct: 135 HKSVATPIRKIVVKVAI 151
>gi|14582514|gb|AAK69522.1|AF282849_3 YiaL [Klebsiella oxytoca]
Length = 154
Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 20 ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENT 79
ER ++FL+T D +L G ++I+G +F + E HR+YLDI +
Sbjct: 19 ERALDFLRTTDFHALAPGVVEIDGQNIFAQVIDLTTRDAAENRPEVHRRYLDIQFLASGE 78
Query: 80 EDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSGECLITFPEDLHQPKV-RVN 136
E + ++ + +S+ +++DI Y + + E + G I FP+D+H+P +
Sbjct: 79 EKIGIAIDTGNNQISESLLEQRDIIFYHDSEHESFFEMTPGNYAIFFPQDVHRPGCNKTV 138
Query: 137 DLPLKKVVFKVAIS 150
P++K+V KVAIS
Sbjct: 139 ATPIRKIVVKVAIS 152
>gi|77976624|ref|ZP_00832102.1| COG2731: Beta-galactosidase, beta subunit [Yersinia intermedia ATCC
29909]
Length = 155
Score = 70.1 bits (170), Expect = 4e-11, Method: Composition-based stats.
Identities = 50/157 (31%), Positives = 87/157 (55%), Gaps = 15/157 (9%)
Query: 1 MIVTEINNLSTYVGVNPYF----ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVAD 56
MI+ E+ + + NP + R + + +DL +LP G+ +IEG +++ N +A
Sbjct: 1 MILDELKSAAN----NPIYPDVIRRALTAICKMDLVNLPAGEQEIEGREIYLN--HIIAT 54
Query: 57 GQP--GDFFETHRKYLDIHLVLENTEDMAVS-SVKSTTVSQPYNKEKDIELYEG-KVEQL 112
+P E HR Y+DIH++LE +E + S S + + ++ E+D L+EG E L
Sbjct: 55 TKPLYEQAPELHRYYIDIHILLEGSEVIGASPSAQRQRPTMDFDSERDYGLFEGITTETL 114
Query: 113 IHLKSGECLITFPEDLHQPKVRVNDL-PLKKVVFKVA 148
+ L G+ + FP +LH+P + D+ P++K+V KVA
Sbjct: 115 LTLAPGDIALLFPGELHRPMGTLGDIAPIRKIVVKVA 151
>gi|154504468|ref|ZP_02041206.1| hypothetical protein RUMGNA_01972 [Ruminococcus gnavus ATCC 29149]
gi|153795243|gb|EDN77663.1| hypothetical protein RUMGNA_01972 [Ruminococcus gnavus ATCC 29149]
Length = 152
Score = 69.7 bits (169), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
M+ T I Y ++ F++ FL+ DL +LP G + I+G++++ N SY
Sbjct: 1 MLTTNILLAEKYDYLSEKFKKAFTFLRDTDLAALPVGNVPIDGNEVYANVQSYSTMDAAD 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVE-QLIHLKSGE 119
FE+H++Y D+ V+E E V++ S Y+ EKD+ Y+ + + LK+G+
Sbjct: 61 CPFESHKEYFDVQYVVEGEECFGYEPVENLIPSVEYDAEKDLIFYQEPADFGSVILKAGD 120
Query: 120 CLITFPEDLHQPK 132
I PED H P+
Sbjct: 121 FAIVPPEDGHAPR 133
>gi|77961195|ref|ZP_00825039.1| COG2731: Beta-galactosidase, beta subunit [Yersinia mollaretii ATCC
43969]
Length = 155
Score = 69.7 bits (169), Expect = 5e-11, Method: Composition-based stats.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 16 NPYF----ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQP--GDFFETHRKY 69
NP++ R + + +DL +LP G+ +IEG +++ N +A +P E HR Y
Sbjct: 12 NPWYPEVIRRTLATISQMDLVNLPAGEQEIEGREIYLN--HIIAATKPLYEQAPELHRYY 69
Query: 70 LDIHLVLENTEDMAVS-SVKSTTVSQPYNKEKDIELYEG-KVEQLIHLKSGECLITFPED 127
+DIH++LE +E + S S + + ++ E+D L+EG E L+ L G+ + FP +
Sbjct: 70 IDIHILLEGSEVIGASPSAQGQRPTMDFDTERDYGLFEGITSETLLTLAPGDIALLFPGE 129
Query: 128 LHQPKVRVNDL-PLKKVVFKVA 148
LH+P + ++ PL+K+V KVA
Sbjct: 130 LHRPMGTLGEVAPLRKIVVKVA 151
>gi|117922148|ref|YP_871340.1| conserved hypothetical protein 22 [Shewanella sp. ANA-3]
gi|117614480|gb|ABK49934.1| conserved hypothetical protein 22 [Shewanella sp. ANA-3]
Length = 153
Score = 69.3 bits (168), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV + N Y ++P + L + D LP G ++G+ +F Y Q
Sbjct: 1 MIVDTLANRHIYQSLSPRIATALAHLASTDFSQLPVGNYPLDGEDIFVIVNDYHTKPQST 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQ----LIHLK 116
+ FE H+KY+D+ V+ E+ + T S+PY ++ D ++ + + I LK
Sbjct: 61 EPFEVHQKYIDVQYVVSGEEEFGYLPLAGQTPSKPYFEKHDYAEFDYESNKANASYIQLK 120
Query: 117 SGECLITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
+G + FP D+H P ++KVV KV I
Sbjct: 121 AGMFALFFPGDMHMPGTSDTPTAVRKVVIKVKI 153
>gi|126699855|ref|YP_001088752.1| hypothetical protein CD2238 [Clostridium difficile 630]
gi|145954280|ref|ZP_01803287.1| hypothetical protein CdifQ_04002591 [Clostridium difficile
QCD-32g58]
gi|115251292|emb|CAJ69123.1| conserved hypothetical protein [Clostridium difficile 630]
Length = 150
Score = 69.3 bits (168), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI IN+ TY ++ R + K L +G I+GD +F N Y +
Sbjct: 1 MIFGNINHSKTYSTLHEDLLRCFEYAKDNSLIDYEKGTYTIDGDDIFVNIVEYKTCEKED 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
F+E H+KY+D+HL+L+ E + ++ +++ + Y ++ D +GK + L+ G+
Sbjct: 61 RFWEAHKKYIDVHLMLDGCERIDINFIENLE-QKIYEEKGDFLPLDGKNNGYMELRKGDF 119
Query: 121 LITFPEDLHQPKVRVNDLP-LKKVVFKVAI 149
L+ +PED H ++V + +KK +FKV +
Sbjct: 120 LVCYPEDAHMTGIKVLEKENIKKAIFKVLV 149
>gi|113971870|ref|YP_735663.1| conserved hypothetical protein 22 [Shewanella sp. MR-4]
gi|113886554|gb|ABI40606.1| conserved hypothetical protein 22 [Shewanella sp. MR-4]
Length = 153
Score = 69.3 bits (168), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV + N Y ++P + L + D LP G ++G+ +F Y Q
Sbjct: 1 MIVDTLANRHIYQSLSPRIATALAHLASTDFSQLPVGNYPLDGEDIFVIVNDYHTKPQST 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQ----LIHLK 116
+ FE H+KY+D+ V+ E+ + T S+PY ++ D ++ + + I LK
Sbjct: 61 EPFEVHQKYIDVQYVVSGEEEFGYLPLSDQTPSKPYFEKHDYAEFDYESNKANASYIQLK 120
Query: 117 SGECLITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
+G + FP D+H P ++KVV KV I
Sbjct: 121 AGMFALFFPGDMHMPGTSDTPTAVRKVVIKVKI 153
>gi|114045924|ref|YP_736474.1| conserved hypothetical protein 22 [Shewanella sp. MR-7]
gi|113887366|gb|ABI41417.1| conserved hypothetical protein 22 [Shewanella sp. MR-7]
Length = 153
Score = 69.3 bits (168), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV + N Y ++P + L + D LP G ++G+ +F Y Q
Sbjct: 1 MIVDTLANRHIYQSLSPRIATALAHLASTDFSQLPVGNYPLDGEDIFVIVNDYHTKPQST 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQ----LIHLK 116
+ FE H+KY+D+ V+ E+ + T S+PY ++ D ++ + + I LK
Sbjct: 61 EPFEVHQKYIDVQYVVSGEEEFGYLPLADQTPSKPYFEKHDYAEFDYESNKANASYIQLK 120
Query: 117 SGECLITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
+G + FP D+H P ++KVV KV I
Sbjct: 121 AGMFALFFPGDMHMPGTSDTPTAVRKVVIKVKI 153
>gi|113948759|ref|ZP_01434416.1| conserved hypothetical protein 22 [Shewanella baltica OS195]
gi|126176075|ref|YP_001052224.1| conserved hypothetical protein 22 [Shewanella baltica OS155]
gi|149116112|ref|ZP_01842844.1| conserved hypothetical protein 22 [Shewanella baltica OS223]
gi|113908933|gb|EAU27581.1| conserved hypothetical protein 22 [Shewanella baltica OS195]
gi|125999280|gb|ABN63355.1| conserved hypothetical protein 22 [Shewanella baltica OS155]
gi|146863966|gb|EDK49428.1| conserved hypothetical protein 22 [Shewanella baltica OS223]
Length = 153
Score = 69.3 bits (168), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV + N Y ++P + L T D LP G ++GD +F Y +
Sbjct: 1 MIVDTLANRHIYQSLSPRLATALEHLATTDFSQLPVGNYPLDGDNIFVIVNDYHTKHKST 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQ----LIHLK 116
+ FE H+KY+D+ V E+ + T S+PY + D ++ + + + LK
Sbjct: 61 EPFEVHQKYIDVQYVFSGEEEFGYLPLAGQTPSKPYFDKHDYAEFDYETNKANASYVQLK 120
Query: 117 SGECLITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
+G + FP D+H P ++KVV KV I
Sbjct: 121 AGMFALFFPGDMHMPGTGDIATAVRKVVIKVKI 153
>gi|119773643|ref|YP_926383.1| hypothetical protein Sama_0503 [Shewanella amazonensis SB2B]
gi|119766143|gb|ABL98713.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 153
Score = 68.9 bits (167), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQP- 59
MIV ++ N Y ++ + + FL DL +LP+G+ +I+GD LF Y D QP
Sbjct: 1 MIVDKLENRHRYHNLHSGIQAALEFLANTDLAALPKGRHNIDGDALFAIVNDY--DTQPP 58
Query: 60 -GDFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQ----LIH 114
+ FETHR+Y D+ V+ E ++ PY+ D Y+ + + +
Sbjct: 59 GTEPFETHRRYADVQFVVSGEEAFGYLPLEDQPPLAPYHDAHDFIEYDYEQNRAAACFVP 118
Query: 115 LKSGECLITFPEDLHQP 131
LK+G I PED+H P
Sbjct: 119 LKAGMFAIFMPEDMHMP 135
>gi|77957615|ref|ZP_00821666.1| COG2731: Beta-galactosidase, beta subunit [Yersinia bercovieri ATCC
43970]
Length = 155
Score = 68.9 bits (167), Expect = 9e-11, Method: Composition-based stats.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 11/142 (7%)
Query: 16 NPYF----ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQP--GDFFETHRKY 69
NP + R + + +DL +LP G+ +IEG +++ N +A +P E HR Y
Sbjct: 12 NPLYPDAIRRTLATISQMDLANLPAGEQEIEGREIYLN--HIIAASKPLYEQAPELHRYY 69
Query: 70 LDIHLVLENTEDMAVS-SVKSTTVSQPYNKEKDIELYEG-KVEQLIHLKSGECLITFPED 127
+DIH++LE +E + S S + + ++ E+D L+E E L+ L G+ + FP +
Sbjct: 70 IDIHILLEGSEVIGASPSAQGQRPTMDFDSERDFGLFERISTETLLTLAPGDIALLFPGE 129
Query: 128 LHQPKVRVNDL-PLKKVVFKVA 148
LH+P + ++ PL+K+V KVA
Sbjct: 130 LHRPMGTLGEVAPLRKIVVKVA 151
>gi|71893592|ref|YP_279038.1| hypothetical protein MHJ_0236 [Mycoplasma hyopneumoniae J]
gi|72080583|ref|YP_287641.1| hypothetical protein MHP7448_0244 [Mycoplasma hyopneumoniae 7448]
gi|71851719|gb|AAZ44327.1| conserved hypothetical protein [Mycoplasma hyopneumoniae J]
gi|71913707|gb|AAZ53618.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448]
Length = 151
Score = 68.6 bits (166), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI ++ N Y +N F +L FLK +L +P GK I+G+K+F +
Sbjct: 1 MIYDKLENFDKYSFLNKNFAKLAVFLKENNLNEIPPGKTQIDGNKIFVINVDVTSFDDTN 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSG 118
+E HR+Y D+H+VL+ E S K Y+++ D+ Y + LI G
Sbjct: 61 ALYEYHRRYADVHIVLDEEEQYFFDFSEKLINKISDYSEKDDVAFYAKDSTRNLIKPLKG 120
Query: 119 ECLITFPEDLHQPKVRVNDLPLKKVVFKV 147
E LI P D H PK ++K++FKV
Sbjct: 121 EFLIFLPGDAHLPKYTGKISTIRKMIFKV 149
>gi|152998979|ref|YP_001364660.1| conserved hypothetical protein 22 [Shewanella baltica OS185]
gi|151363597|gb|ABS06597.1| conserved hypothetical protein 22 [Shewanella baltica OS185]
Length = 153
Score = 68.6 bits (166), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV + N Y ++P + L T D LP G ++GD +F Y +
Sbjct: 1 MIVDTLANRHIYQSLSPRLVTALEHLATTDFSQLPVGNYPLDGDNIFVIVNDYHTKHKST 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQ----LIHLK 116
+ FE H+KY+D+ V E+ + T S+PY + D ++ + + + LK
Sbjct: 61 EPFEVHQKYIDVQYVFSGEEEFGYLPLAGQTPSKPYFDKHDYAEFDYETNKANASYVQLK 120
Query: 117 SGECLITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
+G + FP D+H P ++KVV KV I
Sbjct: 121 AGMFALFFPGDMHMPGTGDIATAVRKVVIKVKI 153
>gi|51246248|ref|YP_066132.1| hypothetical protein DP2396 [Desulfotalea psychrophila LSv54]
gi|50877285|emb|CAG37125.1| hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 149
Score = 68.2 bits (165), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI ++N Y+ +N F R FLK DL + EG+ +++G++++ +
Sbjct: 1 MIFDILDNADRYLPLNTGFARAFEFLKRPDLAEMAEGRYELDGERVYAMVSRDAGRKKDE 60
Query: 61 DFFETHRKYLDIHLVLENTEDMA--VSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSG 118
ETH KY+DI LVL ++M V +++ Y+ DI+ + G E ++ + G
Sbjct: 61 APLETHEKYIDIQLVLAGRDEMGWQAKQVCRQALTE-YDDVDDIQFFAGMPEVWLNTQPG 119
Query: 119 ECLITFPEDLHQPKV 133
I FPED H P +
Sbjct: 120 MFAIFFPEDAHLPLI 134
>gi|127514281|ref|YP_001095478.1| conserved hypothetical protein 22 [Shewanella loihica PV-4]
gi|126639576|gb|ABO25219.1| conserved hypothetical protein 22 [Shewanella loihica PV-4]
Length = 153
Score = 68.2 bits (165), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ + NL+ Y + P + + LK D LP G ++EG +F Y +
Sbjct: 1 MILDTLENLAHYTHLGPRIAKALQHLKETDFTQLPVGNYELEGKDIFVIVNDYETKPREV 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQ----LIHLK 116
+ FE HRKY+D+ V+ E+ + T S+PY + D ++ + + I K
Sbjct: 61 EPFEVHRKYIDVQYVVSGEEEFGYLPLADQTPSKPYYDKHDYAEFDYESNKARAAFIPFK 120
Query: 117 SGECLITFPEDLHQPKV 133
+G + FP+D+H P V
Sbjct: 121 AGMFALFFPQDMHMPGV 137
>gi|156112239|gb|EDO13984.1| hypothetical protein BACOVA_00273 [Bacteroides ovatus ATCC 8483]
Length = 148
Score = 67.8 bits (164), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV+ + N ++P F++L +++K+ DL G I ++GD L N +
Sbjct: 1 MIVSNLQNSQRVEKLHPLFKQLFDYVKSHDLLHEELGTIRLDGDNLIVNNIYPECIPEGK 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVS-QPYNKEKDIELYEGKVEQLIHLKSGE 119
E H Y+D+H++LE E + +++ V Q Y+K+ D LY I+L G+
Sbjct: 61 RLLELHHDYIDVHILLEGKETIGWKALEELKVERQAYDKKSDCALYGDVPTTFINLLPGQ 120
Query: 120 CLITFPEDLHQPKV 133
+I +PED H P +
Sbjct: 121 FVIVYPEDPHAPAI 134
>gi|148323211|gb|EDK88461.1| hypothetical protein FNP_0658 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 151
Score = 67.4 bits (163), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI E+ N+ TY G+N ++ I+F+ + GK I+ DK++ + V+ +
Sbjct: 1 MIYDELKNIKTYKGINKNLDKAIDFIVEKKYLNADFGKNIIDDDKIYFDYPETVSTRENI 60
Query: 61 DF-FETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGE 119
D E H+KY+DIH+VLE E + + + +Q YN EKDI +GK + L
Sbjct: 61 DLELEYHKKYIDIHIVLEEEEIIGYAPFEDCIETQKYNIEKDIAFMKGKNQAEFMLNGTN 120
Query: 120 CLITFPEDLHQP 131
LI FP + H P
Sbjct: 121 FLIVFPNEPHLP 132
>gi|15829131|ref|NP_326491.1| hypothetical protein MYPU_6600 [Mycoplasma pulmonis UAB CTIP]
gi|14090075|emb|CAC13833.1| predicted coding region [Mycoplasma pulmonis]
Length = 153
Score = 67.0 bits (162), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV ++NNL+ Y ++P + +IN+LK L L EGK ++ D +F
Sbjct: 1 MIVDKLNNLNRYKNIHPNLDFVINWLKENSLDKLVEGKTLLKNDDVFVVKVKMDGYNLES 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKS-TTVSQPYNKEKDIELYE-GKVEQLIHLKSG 118
+E H+KY D+H+V++ ED+ + + + + ++ DI+LY + L S
Sbjct: 61 GLYEVHKKYADLHIVVDPREDIYYAQEEELKNLKKEFDTAADIKLYALDTTRNKLSLNSN 120
Query: 119 ECLITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
E + FP + H PK+ + + K++FK+ +
Sbjct: 121 EFVFFFPGEAHGPKMIGENEIMDKIIFKIKM 151
>gi|157086399|gb|ABV16077.1| hypothetical protein CKO_05034 [Citrobacter koseri ATCC BAA-895]
Length = 154
Score = 67.0 bits (162), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 20 ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENT 79
E+ ++FL+T D +L G ++I+G +F + E HR+YLDI +
Sbjct: 19 EKALDFLRTTDFRTLDPGVVEIDGKNIFAQIIDLTTRTAAENRPEVHRRYLDIQFLAWGE 78
Query: 80 EDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSGECLITFPEDLHQPKV-RVN 136
E + V+ + +S+ +++DI Y + + E + G I FP+D+H+P +
Sbjct: 79 EKIGVAIDTGNNQISESLLEQRDIIFYHDSEHESFFEMVPGSYAIFFPQDVHRPGCNKTV 138
Query: 137 DLPLKKVVFKVAIS 150
P++K+V KVAIS
Sbjct: 139 ATPIRKIVVKVAIS 152
>gi|146291623|ref|YP_001182047.1| conserved hypothetical protein 22 [Shewanella putrefaciens CN-32]
gi|145563313|gb|ABP74248.1| conserved hypothetical protein 22 [Shewanella putrefaciens CN-32]
Length = 153
Score = 67.0 bits (162), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV + N Y +NP + L T D LP G ++GD +F Y Q
Sbjct: 1 MIVDTLANRHIYQTLNPRIASALEHLATTDFSQLPVGNYPLDGDDIFVIVNDYHTKHQST 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE--LYEGKVEQ--LIHLK 116
+ FE H+KY+D+ V E+ + T S+PY ++ D YE E I LK
Sbjct: 61 ESFEAHQKYIDVQYVFSGEEEFGYLPLVDQTPSKPYFEKHDYAGFDYESNKENASYIKLK 120
Query: 117 SGECLITFPEDLHQP 131
+G + FP D+H P
Sbjct: 121 AGMFALFFPGDIHMP 135
>gi|52424108|ref|YP_087245.1| EbgC protein [Mannheimia succiniciproducens MBEL55E]
gi|52306160|gb|AAU36660.1| EbgC protein [Mannheimia succiniciproducens MBEL55E]
Length = 153
Score = 67.0 bits (162), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Query: 23 INFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENTEDM 82
+++L D S+ G+ ++ DK++ + E HR YLD+ + TE M
Sbjct: 22 LDYLAKTDFDSMEAGRYPLKDDKIYVQVLDLETKPKAEYLPEVHRNYLDVQYLHSGTEIM 81
Query: 83 AVSS-VKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSGECLITFPEDLHQPKVRVNDLPL 140
VS+ + + V+ YN E+DI Y E + EQ +H + G + FPED H+ + +
Sbjct: 82 GVSTDLGNNAVAVEYNPERDILYYAEAENEQELHCQPGNFAVFFPEDAHRAAIYNGSEKI 141
Query: 141 KKVVFKVAIS 150
+K+V K+A+S
Sbjct: 142 RKIVVKIAMS 151
>gi|124545446|ref|ZP_01704639.1| conserved hypothetical protein 22 [Shewanella putrefaciens 200]
gi|124510789|gb|EAY54856.1| conserved hypothetical protein 22 [Shewanella putrefaciens 200]
Length = 153
Score = 67.0 bits (162), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV + N Y +NP + L T D LP G ++GD +F Y Q
Sbjct: 1 MIVDTLANRHIYQTLNPRIASALEHLATTDFSQLPVGNYPLDGDDIFVIVNDYHTKHQST 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE--LYEGKVEQ--LIHLK 116
+ FE H+KY+D+ V E+ + T S+PY ++ D YE E I LK
Sbjct: 61 ESFEVHQKYIDVQYVFSGEEEFGYLPLVDQTPSKPYFEKHDYAGFDYESNKENASYIKLK 120
Query: 117 SGECLITFPEDLHQP 131
+G + FP D+H P
Sbjct: 121 AGMFALFFPGDIHMP 135
>gi|154505187|ref|ZP_02041925.1| hypothetical protein RUMGNA_02700 [Ruminococcus gnavus ATCC 29149]
gi|153794666|gb|EDN77086.1| hypothetical protein RUMGNA_02700 [Ruminococcus gnavus ATCC 29149]
Length = 149
Score = 66.2 bits (160), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 52/90 (57%)
Query: 41 IEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEK 100
I+ + N S+V+ + +E H+KY+D+H ++E E +A + V S + P+++EK
Sbjct: 40 IQKGVIVANPVSFVSKEEKECMYEAHQKYIDVHYIIEGVERIATADVSSLQIQTPFSEEK 99
Query: 101 DIELYEGKVEQLIHLKSGECLITFPEDLHQ 130
DI Y+G LK+GE ++ FP D H+
Sbjct: 100 DIGFYQGDESGGYLLKAGEFMVCFPSDAHK 129
>gi|118756976|ref|ZP_01604744.1| conserved hypothetical protein 22 [Shewanella pealeana ATCC 700345]
gi|118691487|gb|EAV97735.1| conserved hypothetical protein 22 [Shewanella pealeana ATCC 700345]
Length = 153
Score = 65.9 bits (159), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV + N Y +NP + L T D L GK ++EG LF Y +
Sbjct: 1 MIVDTLANRDIYKAINPRIASALEHLATTDFSQLEIGKYELEGKDLFVIVNDYQTQPKEQ 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQ----LIHLK 116
FE H++Y+D+ V+ E+ + + T S+ Y E D Y+ + + I LK
Sbjct: 61 QAFEVHQQYIDVQYVVSGEEEFGYLPLANQTPSKAYYAEHDYANYDYESNKDDAAFIPLK 120
Query: 117 SGECLITFPEDLHQP 131
+G + FP+D+H P
Sbjct: 121 AGMFALFFPDDIHMP 135
>gi|56415562|ref|YP_152637.1| hypothetical protein SPA3520 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|56129819|gb|AAV79325.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
Length = 154
Score = 65.5 bits (158), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Query: 20 ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENT 79
E+ ++FL+T D +L G ++I+G +F + E HR+YLDI +
Sbjct: 19 EKALHFLRTTDFRTLEPGVVEIDGKNIFAQIIDMTTRDAAENRPEVHRRYLDIQFLAWGE 78
Query: 80 EDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSGECLITFPEDLHQPKVRVN- 136
E + V+ + +S+ +++DI Y + + E I + G + FP+D+H+P +
Sbjct: 79 EKIGVAIDTGNNQISESLLEQRDIIFYHDSEHESFIEMIPGSYALFFPQDVHRPGCNKSI 138
Query: 137 DLPLKKVVFKVAI 149
P++K+V KVAI
Sbjct: 139 ATPIRKIVVKVAI 151
>gi|120600443|ref|YP_965017.1| conserved hypothetical protein 22 [Shewanella sp. W3-18-1]
gi|120560536|gb|ABM26463.1| conserved hypothetical protein 22 [Shewanella sp. W3-18-1]
Length = 153
Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 4/135 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV + N Y +NP + L T D LP G ++GD +F Y Q
Sbjct: 1 MIVDTLANRHIYQTLNPRIASALEHLATTDFSQLPVGNYPLDGDDIFVIVNDYHTKHQST 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE--LYEGKVEQ--LIHLK 116
+ FE H+KY+D+ V E+ + S+PY ++ D YE E I LK
Sbjct: 61 ESFEVHQKYIDVQYVFSGEEEFGYLPLVDQAPSKPYFEKHDYAGFDYESNKENASYIKLK 120
Query: 117 SGECLITFPEDLHQP 131
+G + FP D+H P
Sbjct: 121 AGMFALFFPGDIHMP 135
>gi|117625859|ref|YP_859182.1| hypothetical protein APECO1_2874 [Escherichia coli APEC O1]
gi|115514983|gb|ABJ03058.1| conserved hypothetical protein [Escherichia coli APEC O1]
Length = 154
Score = 64.7 bits (156), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 20 ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENT 79
E+ ++FL+T D +L G ++I+G ++ + E HR+Y+DI +
Sbjct: 19 EKALDFLRTTDFNALEPGVVEIDGKNIYAQIIDLTTREAVENRPEVHRRYIDIQFLAWGE 78
Query: 80 EDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSGECLITFPEDLHQPKVRVN- 136
E + ++ + VS+ +++DI Y + K E I + G I FP+D+H+P N
Sbjct: 79 EKIGIAIDTGNNKVSESLLEQRDIIFYHDSKHESFIEMIPGSYAIFFPQDVHRPACNKNA 138
Query: 137 DLPLKKVVFKVAIS 150
++K+V KVA++
Sbjct: 139 TTAIRKIVVKVALA 152
>gi|152977953|ref|YP_001343582.1| conserved hypothetical protein 22 [Actinobacillus succinogenes
130Z]
gi|150839676|gb|ABR73647.1| conserved hypothetical protein 22 [Actinobacillus succinogenes
130Z]
Length = 157
Score = 64.7 bits (156), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 1 MIVTEINNLSTYVGVNPYFERL---INFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADG 57
MI I+N V NPY + + + +L D ++ G+ ++GDK++
Sbjct: 1 MIFGHISN----VNPNPYPQAIRLALEYLTKTDFDAMTPGRYSLKGDKIYVQVLDLETKP 56
Query: 58 QPGDFFETHRKYLDIHLVLENTEDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHL 115
+ E HR ++D+ + TE MAVS + + V+ Y+ E+DI Y E + EQ +H
Sbjct: 57 KAEYLPEIHRTFIDVQYLHAGTEIMAVSPDLGNNPVAIEYDPERDILYYAEVENEQELHC 116
Query: 116 KSGECLITFPEDLHQPKVRVNDLPLKKVVFKVAIS 150
+ G + FPED H+ + ++K+V K+A+S
Sbjct: 117 QPGNFAVFFPEDTHRAAIYDGSGKIRKIVVKIALS 151
>gi|16762641|ref|NP_458258.1| hypothetical protein STY4129 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29144128|ref|NP_807470.1| hypothetical protein t3850 [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
gi|25302797|pir||AC0979 conserved hypothetical protein STY4129 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16504947|emb|CAD07959.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139765|gb|AAO71330.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
Length = 154
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 20 ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENT 79
E+ ++FL+T D +L G ++I+G F + E HR+YLDI +
Sbjct: 19 EKALHFLRTTDFRTLEPGVVEIDGKNTFAQIIDMTTRDAAENRPEVHRRYLDIQFLAWGE 78
Query: 80 EDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSGECLITFPEDLHQPKVRVN- 136
E + V+ + +S+ +++DI Y + + E I + G + FP+D+H+P +
Sbjct: 79 EKIGVAIDTGNNQISESLLEQRDIIFYHDSEHESFIEMIPGSYALFFPQDVHRPGCNKSI 138
Query: 137 DLPLKKVVFKVAI 149
P++K+V KVAI
Sbjct: 139 ATPIRKIVVKVAI 151
>gi|75242634|ref|ZP_00726378.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli F11]
gi|110643825|ref|YP_671555.1| hypothetical protein YiaL [Escherichia coli 536]
gi|110345417|gb|ABG71654.1| hypothetical protein YiaL [Escherichia coli 536]
Length = 154
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 70/134 (52%), Gaps = 3/134 (2%)
Query: 20 ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENT 79
E+ ++FL+T+D +L G ++I+G ++ + E HR+Y+DI +
Sbjct: 19 EKALDFLRTIDFNALEPGVVEIDGKNIYAQIIDLTTREAVENRPEVHRRYIDIQFLAWGE 78
Query: 80 EDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSGECLITFPEDLHQPKVRVN- 136
E + ++ + VS+ +++DI Y + + E I + G I FP+D+H+P N
Sbjct: 79 EKIGIAIDTGNNKVSESLLEQRDIIFYHDSEHESFIEMIPGSYAIFFPQDVHRPACNKNA 138
Query: 137 DLPLKKVVFKVAIS 150
++K+V KVA++
Sbjct: 139 TTAIRKIVVKVALA 152
>gi|153812355|ref|ZP_01965023.1| hypothetical protein RUMOBE_02754 [Ruminococcus obeum ATCC 29174]
gi|149831517|gb|EDM86604.1| hypothetical protein RUMOBE_02754 [Ruminococcus obeum ATCC 29174]
Length = 171
Score = 63.5 bits (153), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ + Y P + F + V LP GK + G F++V +G
Sbjct: 1 MIMDRLERFRCYQRSVPELWDAVRFAERVQKEQLPPGKYPV------GKGFAFVQEGNTR 54
Query: 61 DF----FETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLK 116
F FE HR YLD+ ++L+ +E + V PY+ E DIE G I +K
Sbjct: 55 SFEEADFEVHRNYLDVQILLDGSEMWEYADRADLAVKTPYDPEADIEWLSG-CGNRIQMK 113
Query: 117 SGECLITFPEDLHQPKVRVND-LPLKKVVFKVAI 149
G + +P+D H+P + +KVV K+ I
Sbjct: 114 PGMFYLVYPDDGHKPCCHEKEQTSYRKVVVKIKI 147
>gi|150378726|ref|ZP_01917923.1| conserved hypothetical protein 22 [Shewanella sediminis HAW-EB3]
gi|150255895|gb|EDM93588.1| conserved hypothetical protein 22 [Shewanella sediminis HAW-EB3]
Length = 153
Score = 63.2 bits (152), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV ++NL Y ++P + L D L G +++G LF Y +
Sbjct: 1 MIVDTLSNLDLYSHISPRIAAALTHLAETDFTRLEVGSYELDGKNLFVIVNDYETKPKEV 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQ----LIHLK 116
+ FE H Y+D+ V+ E+ + S S PYN E D ++ + + I LK
Sbjct: 61 EPFEVHEHYIDVQYVVSGEEEFGFLPLGSQIPSMPYNPEHDYAEFDYEANKREAAFIPLK 120
Query: 117 SGECLITFPEDLHQP 131
+G I FP+D+H P
Sbjct: 121 AGMFAIFFPDDMHMP 135
>gi|26250219|ref|NP_756259.1| Hypothetical protein yiaL [Escherichia coli CFT073]
gi|91213091|ref|YP_543077.1| hypothetical protein YiaL [Escherichia coli UTI89]
gi|26110648|gb|AAN82833.1|AE016768_251 Hypothetical protein yiaL [Escherichia coli CFT073]
gi|91074665|gb|ABE09546.1| hypothetical protein YiaL [Escherichia coli UTI89]
Length = 154
Score = 63.2 bits (152), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 20 ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENT 79
E+ ++FL+T D +L G ++I+G ++ + E HR+Y+DI +
Sbjct: 19 EKALDFLRTTDFNALEPGVVEIDGKNIYAQIIDLTTREAVENRPEVHRRYIDIQFLAWGE 78
Query: 80 EDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSGECLITFPEDLHQPKVRVN- 136
E + ++ + VS+ +++DI Y + + E I + G I FP+D+H+P N
Sbjct: 79 EKIGIAIDTGNNKVSESLLEQRDIIFYHDSEHESFIEMIPGSYAIFFPQDVHRPACNKNA 138
Query: 137 DLPLKKVVFKVAIS 150
++K+V KVA++
Sbjct: 139 TTAIRKIVVKVALA 152
>gi|16766954|ref|NP_462569.1| putative cytoplasmic protein [Salmonella typhimurium LT2]
gi|16422234|gb|AAL22528.1| putative cytoplasmic protein [Salmonella typhimurium LT2]
Length = 154
Score = 63.2 bits (152), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 20 ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENT 79
E+ ++FL+ D +L G ++I+G +F + E HR+YLDI +
Sbjct: 19 EQALDFLRNTDFRTLEPGVVEIDGKNIFAQIIDMTTRDAAENRPEVHRRYLDIQFLAWGE 78
Query: 80 EDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSGECLITFPEDLHQPKVRVN- 136
E + V+ + +S+ +++DI Y + + E I + G + FP+D+H+P +
Sbjct: 79 EKIGVAIDTGNNQISESLLEQRDIIFYHDSEHESFIEMIPGSYALFFPQDVHRPGCNKSI 138
Query: 137 DLPLKKVVFKVAI 149
P++K+V KVAI
Sbjct: 139 ATPIRKIVVKVAI 151
>gi|73912896|gb|AAZ91390.1| hypothetical protein [Neisseria meningitidis]
Length = 153
Score = 62.8 bits (151), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGD--KLFGNCFSYVADGQ 58
MI I+N + Y ++P F + L+T+D LP+G++ + ++F G+
Sbjct: 1 MITDTISNATRYAALHPDFAEAFHLLQTLDFAKLPDGQVPCKNPNIRIFIGSEPMRTKGE 60
Query: 59 PGDFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSG 118
E H K++DI ++ +E YN+++DIE + + E + L+ G
Sbjct: 61 AKP--EAHLKHIDIQTPIDGSETYGWIDRGRLKNGLGYNEKRDIEFFNCEPETWLTLEPG 118
Query: 119 ECLITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
E + FP D H P V + ++K VFK+ I
Sbjct: 119 EFALFFPNDAHAPLVG-DKANIRKAVFKIRI 148
>gi|71894218|ref|YP_278326.1| hypothetical protein MS53_0196 [Mycoplasma synoviae 53]
gi|71851006|gb|AAZ43615.1| conserved hypothetical protein [Mycoplasma synoviae 53]
Length = 151
Score = 62.4 bits (150), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI ++ N+S Y +N F++ I +L +DL LPEG +I+G K++G
Sbjct: 1 MIYDKLENISRYQNLNKNFDKAIKWLSNLDLNHLPEGVFEIDGKKVYGFHVDVEGYDDLN 60
Query: 61 DFFETHRKYLDIHLVLENTEDM-AVSSVKSTTVSQPYNKEKDIELYEGKVEQ-LIHLKSG 118
+E H+ Y D+H+V++ E + + T Y+++ D++L+E E+ L+
Sbjct: 61 KQYEVHQVYADLHIVVDEREKFYYLYESELTHKKNDYSQKNDVQLFELPNERNLLAPIKH 120
Query: 119 ECLITFPEDLHQPKVRVNDLPLKKVVFKV 147
E L+ P++ H PK + KK V K+
Sbjct: 121 EFLLFLPKEGHVPKYISSRDKFKKFVLKI 149
>gi|150007561|ref|YP_001302304.1| hypothetical protein BDI_0914 [Parabacteroides distasonis ATCC
8503]
gi|149935985|gb|ABR42682.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
Length = 149
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ + N ++P F++ +++K+ D + +GK DI + S +
Sbjct: 1 MILDSLENSKRIECIHPLFKQAFDYVKSTDFSKMEDGKYDIADAGFTVSIASLFGKEKSE 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVS-SVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGE 119
ETH+K++DI L E + + S PYN+E+DI Y K + G+
Sbjct: 61 AAIETHKKFIDIQFPLLGVEKIGWKPGDQLLEESVPYNEEQDIAFYIDKPTAYTKIYPGQ 120
Query: 120 CLITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
I FPED H P + + ++KVV K+ +
Sbjct: 121 FAIYFPEDGHAPGIGQGN--IRKVVIKIPV 148
>gi|110803219|ref|YP_697514.1| hypothetical protein CPR_0177 [Clostridium perfringens SM101]
gi|110683720|gb|ABG87090.1| conserved hypothetical protein [Clostridium perfringens SM101]
Length = 150
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 79/151 (52%), Gaps = 3/151 (1%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI + NL +Y + + + K ++ G +I+G++LF N +Y +
Sbjct: 1 MIFGNLINLESYNYLPELVKEALIHAKNNNVIEFEPGTHEIKGEELFFNRVNYTTKNKED 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
F+E H+KY+D+H+V E + + + K + + ++ D ++GK + L+ G+
Sbjct: 61 RFWEGHKKYIDVHVVFSGRERIDI-NFKENLKFKEFVEKDDFLSFDGKENSTVVLEEGDF 119
Query: 121 LITFPEDLHQPKVRVNDLP--LKKVVFKVAI 149
LI +PED+H ++ ++ P +KK ++KV +
Sbjct: 120 LICYPEDIHMTCLKADNEPSDVKKAIYKVIL 150
>gi|146301925|ref|YP_001196516.1| conserved hypothetical protein 22 [Flavobacterium johnsoniae UW101]
gi|146156343|gb|ABQ07197.1| conserved hypothetical protein 22 [Flavobacterium johnsoniae UW101]
Length = 149
Score = 61.2 bits (147), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDI-EGDKLFGNCFSYVADGQP 59
MI+ ++N + Y ++P F++ ++ D+ SL G I+I EG KL + +
Sbjct: 1 MIIDSVHNAAKYYRLHPNFQKAFEYVNQTDIASLEAGVIEISEGLKLIVIHGDGSSREES 60
Query: 60 GDFFETHRKYLDIHLVLENTEDMAVS-SVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSG 118
FE H K +DI + ++ E A K + + Y+ EKD+ + K + L+
Sbjct: 61 IKGFECHDKNIDIQISIQGPETFAWKPREKCISPNGDYSDEKDVRFFHDKPDMFFELQEK 120
Query: 119 ECLITFPEDLHQPKVRVNDLPLKKVVFKVAI 149
+ I +PED+H + + LKK+VFKV I
Sbjct: 121 QFAILYPEDVH--AAMIGEGFLKKLVFKVKI 149
>gi|75229620|ref|ZP_00716159.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli B7A]
Length = 150
Score = 61.2 bits (147), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ I+NL +++ + I +K P+GK DIEG++LF + +
Sbjct: 1 MIIGNIHNLQSWLPQE--LRQAIEHIKAHVTAETPKGKYDIEGNRLFYLISEDMTEPYEA 58
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE-LYEGKVEQLIHLKSGE 119
E H +YLDI +VL+ E M S+ + T + +KDI L EG E+ + L G+
Sbjct: 59 RRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGD 118
Query: 120 CLITFPEDLHQP 131
++ +P ++H+P
Sbjct: 119 FVVFYPGEVHKP 130
>gi|94993606|ref|YP_601704.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10750]
gi|94547114|gb|ABF37160.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10750]
Length = 151
Score = 60.8 bits (146), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
M + N+S Y G++P+ + I FL+T DL L EGK I G+K+F
Sbjct: 1 MFYDRLKNISRYRGIHPHLDAAITFLQTTDLRQLAEGKYPILGEKVFAVIQRNQLSKADN 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
E H++Y D HL+L E + V P+ +E DI + L
Sbjct: 61 SLLEYHKRYADCHLLLAGNECIRYGIGNQAEVV-PFEQEADIGFVACDRTYDLDLVDDSF 119
Query: 121 LITFPEDLHQP 131
FP + HQP
Sbjct: 120 AYFFPNEPHQP 130
>gi|19745387|ref|NP_606523.1| hypothetical protein spyM18_0238 [Streptococcus pyogenes MGAS8232]
gi|19747495|gb|AAL97022.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
Length = 151
Score = 60.8 bits (146), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
M + N+S Y G++P+ + I FL+T DL L EGK I G+K+F
Sbjct: 1 MFYDRLKNISRYRGIHPHLDAAITFLQTTDLRQLAEGKYPILGEKVFAVIQRNQLSKADN 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
E H++Y D HL+L E + V P+ +E DI + L
Sbjct: 61 SLLEYHKRYADCHLLLAGNECIRYGIGNQAEVV-PFEQEADIGFVTCDRTYDLDLVDDSF 119
Query: 121 LITFPEDLHQP 131
FP + HQP
Sbjct: 120 AYFFPNEPHQP 130
>gi|18309169|ref|NP_561103.1| hypothetical protein CPE0187 [Clostridium perfringens str. 13]
gi|18143844|dbj|BAB79893.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 150
Score = 60.8 bits (146), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 79/151 (52%), Gaps = 3/151 (1%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI + NL +Y + + + K ++ G +I+G++LF N +Y +
Sbjct: 1 MIFGNLINLESYDYLPKLVKEALLHAKNNNVIEFEPGTHEIKGEELFFNRVNYTTKNKED 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
F+E H+KY+D+H+V E + + + K + + ++ D ++GK + L+ G+
Sbjct: 61 RFWEGHKKYIDVHVVFSGRERIDL-NFKENLEFKEFVEKDDFLSFDGKENSTVILEEGDF 119
Query: 121 LITFPEDLHQPKVRVNDLP--LKKVVFKVAI 149
LI +PED+H ++ ++ P +KK ++KV +
Sbjct: 120 LICYPEDIHMTCLKADNEPSDVKKAIYKVIL 150
>gi|110799028|ref|YP_694644.1| conserved hypothetical protein subfamily [Clostridium perfringens
ATCC 13124]
gi|110673675|gb|ABG82662.1| conserved hypothetical protein subfamily [Clostridium perfringens
ATCC 13124]
Length = 150
Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 79/151 (52%), Gaps = 3/151 (1%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI + NL +Y + + + K ++ G +I+G++LF N +Y +
Sbjct: 1 MIFGNLINLESYDYLPKLVKEALLHAKNNNVIEFEPGTHEIKGEELFFNRVNYTTKNKED 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGEC 120
F+E H+KY+D+H+V E + + + K + + ++ D ++GK + L+ G+
Sbjct: 61 RFWEGHKKYIDVHVVFSGRERIDL-NFKENLEFKEFVEKDDFLSFDGKENSTVVLEEGDF 119
Query: 121 LITFPEDLHQPKVRVNDLP--LKKVVFKVAI 149
LI +PED+H ++ ++ P +KK ++KV +
Sbjct: 120 LICYPEDIHMTCLKADNEPSDVKKAIYKVIL 150
>gi|75179350|ref|ZP_00699354.1| COG2731: Beta-galactosidase, beta subunit [Shigella boydii BS512]
gi|75212196|ref|ZP_00712236.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli B171]
Length = 150
Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ I+NL ++ + I +K P+GK DIEG++LF + +
Sbjct: 1 MIIGNIHNLQPWLPQE--LRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPHEA 58
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE-LYEGKVEQLIHLKSGE 119
E H +YLDI +VL+ E M S+ + T + +KDI L EG E+ + L G+
Sbjct: 59 RRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGD 118
Query: 120 CLITFPEDLHQP 131
++ +P ++H+P
Sbjct: 119 FVVFYPGEVHKP 130
>gi|54309450|ref|YP_130470.1| hypothetical protein PBPRA2282 [Photobacterium profundum SS9]
gi|46913886|emb|CAG20668.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 163
Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 19 FERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLEN 78
++ + F+++ L LP G+ +I+G+ +F N + A E H++Y+D+ ++
Sbjct: 19 LKKALEFVQSSGLDKLPLGRHNIDGELMFANVMEFEAGVAEQKLAEVHKEYIDVQFLISG 78
Query: 79 TEDMAVS-SVKSTTVSQPYNKEKDIELYEG-KVEQLIHLKSGECLITFPEDLHQPKVRVN 136
E + + KS +S Y+ E D L E K E + L++G I FPE+ H+P R
Sbjct: 79 FERIGYGLANKSNPISTEYDSENDYYLVESMKHECEVLLEAGMFAIFFPEEPHKPGCRYA 138
Query: 137 D---------LPLKKVVFKV 147
D LKKVV KV
Sbjct: 139 DEQASMTYDNYMLKKVVVKV 158
>gi|82546502|ref|YP_410449.1| hypothetical protein SBO_4195 [Shigella boydii Sb227]
gi|81247913|gb|ABB68621.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 153
Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ I+NL ++ + I +K P+GK DIEG++LF + +
Sbjct: 4 MIIGNIHNLQPWLPQE--LRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPHEA 61
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE-LYEGKVEQLIHLKSGE 119
E H +YLDI +VL+ E M S+ + T + +KDI L EG E+ + L G+
Sbjct: 62 RRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGD 121
Query: 120 CLITFPEDLHQP 131
++ +P ++H+P
Sbjct: 122 FVVFYPGEVHKP 133
>gi|46580713|ref|YP_011521.1| conserved hypothetical protein TIGR00022 [Desulfovibrio vulgaris
subsp. vulgaris str. Hildenborough]
gi|120601998|ref|YP_966398.1| conserved hypothetical protein 22 [Desulfovibrio vulgaris subsp.
vulgaris DP4]
gi|46450132|gb|AAS96781.1| conserved hypothetical protein TIGR00022 [Desulfovibrio vulgaris
subsp. vulgaris str. Hildenborough]
gi|120562227|gb|ABM27971.1| conserved hypothetical protein 22 [Desulfovibrio vulgaris subsp.
vulgaris DP4]
Length = 163
Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV +++ Y P +ER FL + +G+ I GD L+ N +Y G
Sbjct: 1 MIVASLDHWRRYCA-GPLWERAFGFLAHA-AADITDGRHVILGDDLYANVATYEPRALDG 58
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQL--IHLKSG 118
+E H Y+DI VL E M V+S + PY+ D+ Y E + L G
Sbjct: 59 ARYEAHECYIDIQYVLAGGEWMHVASRAPLVPAGPYDAAGDVRFYAQGDEAYARVPLLPG 118
Query: 119 ECLITFPEDLHQPKVR-VNDLPLKKVVFKVAIS 150
+ +PED H P ++ ++K+V KV ++
Sbjct: 119 TFAVLYPEDAHMPGLQGPYQGTVRKIVVKVRMA 151
>gi|38704249|ref|NP_313256.2| hypothetical protein ECs5229 [Escherichia coli O157:H7 str. Sakai]
gi|75188963|ref|ZP_00702230.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli
E24377A]
gi|75235442|ref|ZP_00719650.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli
E110019]
gi|75258351|ref|ZP_00729782.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli E22]
gi|75515486|ref|ZP_00737643.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli 53638]
gi|83586722|ref|ZP_00925354.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli 101-1]
gi|124528311|ref|ZP_01699635.1| conserved hypothetical protein 22 [Escherichia coli B]
gi|124500753|gb|EAY48223.1| conserved hypothetical protein 22 [Escherichia coli B]
gi|157077271|gb|ABV16979.1| conserved hypothetical protein [Escherichia coli E24377A]
Length = 150
Score = 59.3 bits (142), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ I+NL ++ + I +K P+GK DIEG++LF + +
Sbjct: 1 MIIGNIHNLQPWLPQE--LRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEA 58
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE-LYEGKVEQLIHLKSGE 119
E H +YLDI +VL+ E M S+ + T + +KDI L EG E+ + L G+
Sbjct: 59 RRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGD 118
Query: 120 CLITFPEDLHQP 131
++ +P ++H+P
Sbjct: 119 FVVFYPGEVHKP 130
>gi|83569378|ref|ZP_00920832.1| COG2731: Beta-galactosidase, beta subunit [Shigella dysenteriae
1012]
Length = 150
Score = 59.3 bits (142), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ I+NL ++ + I +K P+GK DIEG++LF + +
Sbjct: 1 MIIGNIHNLQPWLPQE--LRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEA 58
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE-LYEGKVEQLIHLKSGE 119
E H +YLDI +VL E M S+ + T + +KDI L EG E+ + L G+
Sbjct: 59 RRAEYHARYLDIQIVLRGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGD 118
Query: 120 CLITFPEDLHQP 131
++ +P ++H+P
Sbjct: 119 FVVFYPGEVHKP 130
>gi|82779313|ref|YP_405662.1| hypothetical protein SDY_4270 [Shigella dysenteriae Sd197]
gi|81243461|gb|ABB64171.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 153
Score = 59.3 bits (142), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ I+NL ++ + I +K P+GK DIEG++LF + +
Sbjct: 4 MIIGNIHNLQPWLPQE--LRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEA 61
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE-LYEGKVEQLIHLKSGE 119
E H +YLDI +VL+ E M S+ + T + +KDI L EG E+ + L G+
Sbjct: 62 RRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGD 121
Query: 120 CLITFPEDLHQP 131
++ +P ++H+P
Sbjct: 122 FVVFYPGEVHKP 133
>gi|15804844|ref|NP_290885.1| hypothetical protein Z5864 [Escherichia coli O157:H7 EDL933]
gi|12519261|gb|AAG59451.1|AE005657_11 orf, hypothetical protein [Escherichia coli O157:H7 EDL933]
gi|13364707|dbj|BAB38652.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
Length = 153
Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ I+NL ++ + I +K P+GK DIEG++LF + +
Sbjct: 4 MIIGNIHNLQPWLPQE--LRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEA 61
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE-LYEGKVEQLIHLKSGE 119
E H +YLDI +VL+ E M S+ + T + +KDI L EG E+ + L G+
Sbjct: 62 RRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGD 121
Query: 120 CLITFPEDLHQP 131
++ +P ++H+P
Sbjct: 122 FVVFYPGEVHKP 133
>gi|15603120|ref|NP_246192.1| hypothetical protein PM1255 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721612|gb|AAK03339.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 158
Score = 58.9 bits (141), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 23 INFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENTEDM 82
+++L D L G+ I GD+++ + E HR Y+D+ + E +
Sbjct: 22 LDYLSNTDFNQLAAGRYPIRGDRIYAQVLDLETQEPSMLYPEVHRHYIDVQYLHSGFERI 81
Query: 83 AVS-SVKSTTVSQPYNKEKDIELYEGKVEQLIHL--KSGECLITFPEDLHQPK-VRVNDL 138
V+ + + +++PY+ +DI Y+ VE + L + G I FP D+H+P + +
Sbjct: 82 GVAIDLGNNDIAKPYDATRDILFYQ-NVENEVQLIMRPGHFAIFFPSDVHRPACIDGHST 140
Query: 139 PLKKVVFKVAIS 150
++KVV K+A+S
Sbjct: 141 SIRKVVVKIAVS 152
>gi|75211330|ref|ZP_00711429.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli B171]
gi|75231579|ref|ZP_00717937.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli B7A]
gi|75237513|ref|ZP_00721546.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli
E110019]
gi|75260135|ref|ZP_00731403.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli E22]
Length = 155
Score = 58.5 bits (140), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 20 ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENT 79
E+ ++FL+ D +L G ++I+G ++ + E HR+Y+DI +
Sbjct: 19 EKALDFLRATDFNALEPGVVEIDGKNIYAQIIDLTTREAVENRPEVHRRYIDIQFLAWGE 78
Query: 80 EDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSGECLITFPEDLHQPKVRVND 137
E + ++ + VS+ +++DI Y + + E I + G I FP+D+H+P +
Sbjct: 79 EKIGIAIDTGNNKVSESLLEQRDIIFYHDSEHESFIEMIPGSYAIFFPQDVHRPGCILQT 138
Query: 138 LP-LKKVVFKVAIS 150
++K+V KVA++
Sbjct: 139 ASEIRKIVVKVALT 152
>gi|77634904|ref|ZP_00796996.1| COG2731: Beta-galactosidase, beta subunit [Yersinia pestis Angola]
Length = 152
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ I++L+ + I ++K+ P GK DI+G+ +F + D
Sbjct: 1 MIIGNIHHLALLPYLPAQLRDAIEYVKSHINADTPLGKHDIDGNNVFVLVSNDSTDLLEN 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE-LYEGKVEQLIHLKSGE 119
E H KYLDI ++L E MA S++ + + +KDI L G E+ + L++G+
Sbjct: 61 RRAEYHAKYLDIQIILAGQEGMAFSNLHAGKPDTDWLADKDIAFLPAGTDEKHVVLQTGD 120
Query: 120 CLITFPEDLHQPKVRVND-LPLKKVVFKVAI 149
++ FP ++H+P V + ++K V K+A+
Sbjct: 121 FVVFFPGEVHKPLCAVGEPANVRKAVVKIAV 151
>gi|15901515|ref|NP_346119.1| hypothetical protein SP_1680 [Streptococcus pneumoniae TIGR4]
gi|111658541|ref|ZP_01409204.1| hypothetical protein SpneT_02000297 [Streptococcus pneumoniae
TIGR4]
gi|149006752|ref|ZP_01830438.1| hypothetical protein CGSSp18BS74_05822 [Streptococcus pneumoniae
SP18-BS74]
gi|14973173|gb|AAK75759.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
gi|147761667|gb|EDK68631.1| hypothetical protein CGSSp18BS74_05822 [Streptococcus pneumoniae
SP18-BS74]
Length = 150
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI ++ N++ Y G++P ++ I++L S GK DI+GDK+F V +
Sbjct: 1 MIFDDLKNITFYKGIHPNLDKAIDYLYQHRKDSFELGKYDIDGDKVFLVVQENVLNQAEN 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSS-VKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGE 119
D FE H+ Y D+HL++E E + S +K V+ +++ DI + L
Sbjct: 61 DQFEYHKNYADLHLLVEGHEYSSYGSRIKDEAVA--FDEASDIGFVHCHEHYPLLLGYHN 118
Query: 120 CLITFPEDLHQPKVRVN-DLPLKKVVFKVAI 149
I FP + HQP + ++K +FK+ I
Sbjct: 119 FAIFFPGEPHQPNGYAGMEEKVRKYLFKILI 149
>gi|75197483|ref|ZP_00707553.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli HS]
gi|157068734|gb|ABV07989.1| conserved hypothetical protein [Escherichia coli HS]
Length = 142
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 20 ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENT 79
E+ ++FL+ D +L G ++I+G ++ + E HR+Y+DI +
Sbjct: 6 EKALDFLRATDFNALEPGVVEIDGKNIYAQIIDLTTREAVENRPEVHRRYIDIQFLAWGE 65
Query: 80 EDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSGECLITFPEDLHQPKVRVND 137
E + ++ + VS+ +++DI Y + + E I + G I FP+D+H+P +
Sbjct: 66 EKIGIAIDTGNNKVSESLLEQRDIIFYHDSEHESFIEMIPGSYAIFFPQDVHRPGCILQT 125
Query: 138 LP-LKKVVFKVAIS 150
++K+V KVA++
Sbjct: 126 ASEIRKIVVKVALT 139
>gi|16123595|ref|NP_406908.1| hypothetical protein YPO3447 [Yersinia pestis CO92]
gi|22124652|ref|NP_668075.1| hypothetical protein y0739 [Yersinia pestis KIM]
gi|45440489|ref|NP_992028.1| hypothetical protein YP_0637 [Yersinia pestis biovar Microtus str.
91001]
gi|51594877|ref|YP_069068.1| hypothetical protein YPTB0525 [Yersinia pseudotuberculosis IP
32953]
gi|89101650|ref|ZP_01174365.1| COG2731: Beta-galactosidase, beta subunit [Yersinia pestis biovar
Orientalis str. IP275]
gi|89105075|ref|ZP_01177602.1| COG2731: Beta-galactosidase, beta subunit [Yersinia pestis biovar
Orientalis str. IP275]
gi|108808940|ref|YP_652856.1| hypothetical protein YPA_2949 [Yersinia pestis Antiqua]
gi|108810806|ref|YP_646573.1| hypothetical protein YPN_0641 [Yersinia pestis Nepal516]
gi|145600511|ref|YP_001164587.1| hypothetical protein YPDSF_3257 [Yersinia pestis Pestoides F]
gi|153949098|ref|YP_001402504.1| hypothetical protein YpsIP31758_3550 [Yersinia pseudotuberculosis
IP 31758]
gi|153997511|ref|ZP_02022611.1| hypothetical protein YPE_3967 [Yersinia pestis CA88-4125]
gi|21957460|gb|AAM84326.1|AE013675_6 hypothetical protein y0739 [Yersinia pestis KIM]
gi|45435346|gb|AAS60905.1| conserved hypothetical protein [Yersinia pestis biovar Microtus
str. 91001]
gi|51588159|emb|CAH19765.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|108774454|gb|ABG16973.1| hypothetical protein YPN_0641 [Yersinia pestis Nepal516]
gi|108780853|gb|ABG14911.1| hypothetical protein YPA_2949 [Yersinia pestis Antiqua]
gi|115349074|emb|CAL22036.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145212207|gb|ABP41614.1| hypothetical protein YPDSF_3257 [Yersinia pestis Pestoides F]
gi|149289148|gb|EDM39228.1| hypothetical protein YPE_3967 [Yersinia pestis CA88-4125]
gi|152960593|gb|ABS48054.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
31758]
Length = 152
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ I++L+ + I ++K+ P GK DI+G+ +F + D
Sbjct: 1 MIIGNIHHLALLPYLPAQLRDAIEYVKSHINADTPLGKHDIDGNNVFVLVSNDSTDLLEN 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE-LYEGKVEQLIHLKSGE 119
E H KYLDI ++L E MA S++ + + +KDI L G E+ + L++G+
Sbjct: 61 RRAEYHAKYLDIQIILAGQEGMAFSNLPAGKPDTDWLADKDIAFLPAGTDEKHVVLQTGD 120
Query: 120 CLITFPEDLHQPKVRVND-LPLKKVVFKVAI 149
++ FP ++H+P V + ++K V K+A+
Sbjct: 121 FVVFFPGEVHKPLCAVGEPANVRKAVVKIAV 151
>gi|31544335|ref|NP_852913.1| hypothetical protein MGA_0848 [Mycoplasma gallisepticum R]
gi|31541179|gb|AAP56481.1| conserved hypothetical protein [Mycoplasma gallisepticum R]
Length = 162
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLK--TVDLGSLPEGKIDIEGDKLFGNCFSYVADGQ 58
MI ++ N Y+ VN YF ++ FL+ DL L G +I+G L+ N V
Sbjct: 1 MIYDKLENFDKYLSVNKYFPKIKAFLEQHNYDLSHLRVGIHEIDGMDLYLNVLDSVVYLN 60
Query: 59 PGDFFETHRKYLDIHLVLENTE---DMAVSSVKSTTVSQPYNKEKDIELY------EGKV 109
+E H KY D+HLV + E K+ V PYN+ KD+ Y +G
Sbjct: 61 TEARYELHHKYGDVHLVFNSGEIYFSQHAEDAKNMKVEIPYNETKDVTFYISDTTKDGVS 120
Query: 110 EQLIHLKSGECLITFPEDLHQPKVRVNDLPLKKVV 144
+ ++ P DLH P RV++ P ++
Sbjct: 121 HNRLVPSKNSFVVFLPGDLHAP--RVSEQPSNNII 153
>gi|75198101|ref|ZP_00708171.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli HS]
gi|157069408|gb|ABV08663.1| conserved hypothetical protein [Escherichia coli HS]
Length = 150
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ I+NL ++ + I +K P+GK DIEG++LF + +
Sbjct: 1 MIIGNIHNLQPWLPQE--LRQAIEHIKAHVTVETPKGKHDIEGNRLFYLISEDMTEPYEA 58
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE-LYEGKVEQLIHLKSGE 119
E H +YLDI +VL+ E M S+ + T + +KDI L EG E+ + L G+
Sbjct: 59 RRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGD 118
Query: 120 CLITFPEDLHQP 131
++ +P ++H+P
Sbjct: 119 FVVFYPGEVHKP 130
>gi|30065461|ref|NP_839632.1| hypothetical protein S4500 [Shigella flexneri 2a str. 2457T]
gi|56480554|ref|NP_709950.2| hypothetical protein SF4239 [Shigella flexneri 2a str. 301]
gi|89110968|ref|AP_004748.1| hypothetical protein [Escherichia coli W3110]
gi|90111713|ref|NP_418673.4| conserved protein [Escherichia coli K12]
gi|110808010|ref|YP_691530.1| hypothetical protein SFV_4243 [Shigella flexneri 5 str. 8401]
gi|84027982|sp|P0AF96|YJGK_ECOLI Uncharacterized protein yjgK
gi|84027983|sp|P0AF97|YJGK_SHIFL Uncharacterized protein yjgK
gi|30043725|gb|AAP19444.1| hypothetical protein S4500 [Shigella flexneri 2a str. 2457T]
gi|56384105|gb|AAN45657.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|85676999|dbj|BAE78249.1| conserved hypothetical protein [Escherichia coli W3110]
gi|87082398|gb|AAC77209.2| conserved protein [Escherichia coli K12]
gi|110617558|gb|ABF06225.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 150
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ I+NL ++ + I +K P+GK DIEG++LF + +
Sbjct: 1 MIIGNIHNLQPWLPQE--LRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEA 58
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE-LYEGKVEQLIHLKSGE 119
E H +YLDI +VL+ E M S+ + + +KDI L EG E+ + L G+
Sbjct: 59 RRAEYHARYLDIQIVLKGQEGMTFSTQPAGAPDTDWLADKDIAFLPEGVDEKTVILNEGD 118
Query: 120 CLITFPEDLHQP 131
++ +P ++H+P
Sbjct: 119 FVVFYPGEVHKP 130
>gi|50122688|ref|YP_051855.1| hypothetical protein ECA3766 [Erwinia carotovora subsp. atroseptica
SCRI1043]
gi|49613214|emb|CAG76665.1| conserved hypothetical protein [Erwinia carotovora subsp.
atroseptica SCRI1043]
Length = 155
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 26 LKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENTEDMAVS 85
+ +L +LPEG+ EG + F N + + E H YLDI L+LE E +
Sbjct: 27 MSLAELNALPEGRYQPEGAEWFYNIGTVNTAPRATRHTEFHSNYLDIQLILEGEEIIGYG 86
Query: 86 SVKSTTVSQPYNKEK-DIELYEG-KVEQLIHLKSGECLITFPEDLHQPKVRVND--LPLK 141
+ QP + K D+ + + +V IHL++G+ + +P + HQ +ND P+K
Sbjct: 87 L--NDVHGQPATERKPDLYILDNPEVPHQIHLRAGDFVTFYPGEAHQALCAINDNPAPVK 144
Query: 142 KVVFKVAIS 150
K VFK+ ++
Sbjct: 145 KAVFKIPVT 153
>gi|75188340|ref|ZP_00701607.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli
E24377A]
gi|157080313|gb|ABV20021.1| conserved hypothetical protein [Escherichia coli E24377A]
Length = 155
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 20 ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENT 79
E+ ++FL+ D +L G ++I+G ++ + E HR+Y+DI +
Sbjct: 19 EKGLDFLRATDFNALEPGVVEIDGKNIYAQIIDLTTREAVENRPEVHRRYIDIQFLAWGE 78
Query: 80 EDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSGECLITFPEDLHQPKVRVND 137
E + ++ + VS+ +++DI Y + + E I + G I FP+D+H+P +
Sbjct: 79 EKIGIAIDTGNNKVSESLLEQRDIIFYHDSEHESFIEMIPGSYAIFFPQDVHRPGCILQT 138
Query: 138 LP-LKKVVFKVAIS 150
++K+V KVA++
Sbjct: 139 ASEIRKIVVKVALT 152
>gi|75515962|ref|ZP_00738080.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli 53638]
gi|83588570|ref|ZP_00927194.1| COG2731: Beta-galactosidase, beta subunit [Escherichia coli 101-1]
gi|124526858|ref|ZP_01698740.1| conserved hypothetical protein 22 [Escherichia coli B]
gi|124501552|gb|EAY49015.1| conserved hypothetical protein 22 [Escherichia coli B]
Length = 155
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 20 ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENT 79
E+ ++FL+ D +L G ++I+G ++ + E HR+Y+DI +
Sbjct: 19 EKALDFLRATDFNALEPGVVEIDGKNIYTQIIDLTTREAVVNRPEVHRRYIDIQFLAWGE 78
Query: 80 EDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSGECLITFPEDLHQPK-VRVN 136
E + ++ + VS+ +++DI Y + + E I + G I FP+D+H+P +
Sbjct: 79 EKIGIAIDTGNNKVSESLLEQRDIIFYHDSEHESFIEMIPGSYAIFFPQDVHRPGCIMQT 138
Query: 137 DLPLKKVVFKVAIS 150
++K+V KVA++
Sbjct: 139 ASEIRKIVVKVALT 152
>gi|537093|gb|AAA97148.1| ORF_o153b [Escherichia coli]
Length = 153
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ I+NL ++ + I +K P+GK DIEG++LF + +
Sbjct: 4 MIIGNIHNLQPWLPQE--LRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEA 61
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE-LYEGKVEQLIHLKSGE 119
E H +YLDI +VL+ E M S+ + + +KDI L EG E+ + L G+
Sbjct: 62 RRAEYHARYLDIQIVLKGQEGMTFSTQPAGAPDTDWLADKDIAFLPEGVDEKTVILNEGD 121
Query: 120 CLITFPEDLHQP 131
++ +P ++H+P
Sbjct: 122 FVVFYPGEVHKP 133
>gi|77978586|ref|ZP_00834013.1| COG2731: Beta-galactosidase, beta subunit [Yersinia intermedia ATCC
29909]
Length = 152
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLF----GNCFSYVAD 56
MI I++L + + I ++K+ P GK DI+G+ LF +C Y+ +
Sbjct: 1 MITGNIHHLELLPYLPAQLKEAIEYVKSHITAETPLGKHDIDGNNLFVLISNDCTDYLEN 60
Query: 57 GQPGDFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKV-EQLIHL 115
+ E H KYLDI +VL E M S+ + + +KDI V E+L +
Sbjct: 61 RRA----EYHAKYLDIQIVLAGVEGMTFSNQPAGKPDTDWLADKDIAFLPAGVDEKLFVM 116
Query: 116 KSGECLITFPEDLHQPKVRVND-LPLKKVVFKVAI 149
++G+ ++ +P ++H+P V + ++K V K+++
Sbjct: 117 QTGDFVVFYPGEVHKPLCAVGEPANVRKAVVKISV 151
>gi|152973130|ref|YP_001338276.1| hypothetical protein KPN_04658 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150957979|gb|ABR80009.1| hypothetical protein KPN_04658 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 150
Score = 57.4 bits (137), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 35 PEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQ 94
P GK I+GD LF + Q E H +YLDI +VL +E M S++
Sbjct: 33 PLGKHAIDGDNLFYLISEDTTEPQAARRAEYHARYLDIQIVLRGSEGMTFSTLPPGEPQT 92
Query: 95 PYNKEKDIE-LYEGKVEQLIHLKSGECLITFPEDLHQP 131
+ EKDI L EG+ E+ + L G+ ++ +P ++H+P
Sbjct: 93 DWLAEKDIAFLAEGRQEKTVILNEGDFVVFYPGEVHKP 130
>gi|90413667|ref|ZP_01221656.1| hypothetical protein P3TCK_01170 [Photobacterium profundum 3TCK]
gi|90325288|gb|EAS41782.1| hypothetical protein P3TCK_01170 [Photobacterium profundum 3TCK]
Length = 163
Score = 57.4 bits (137), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 19 FERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLEN 78
++ + ++++ +L LP G+ +I+G+ +F N + E H++Y+D+ ++
Sbjct: 19 LKKALEYVQSSELDKLPLGRHNIDGELMFANVMEFETGVAEQKLAEVHKEYIDVQFLISG 78
Query: 79 TEDMAVS-SVKSTTVSQPYNKEKDIELYEG-KVEQLIHLKSGECLITFPEDLHQPKVR-- 134
E + + KS ++ Y+ E D L E K E + L+ G I FPE+ H+P R
Sbjct: 79 FERIGYGLANKSNPIATEYDSENDYYLVESMKHECEVLLEPGMFAIFFPEEPHKPGCRYT 138
Query: 135 -------VNDLPLKKVVFKV 147
N+ LKKVV KV
Sbjct: 139 DEQVSMTCNNYMLKKVVVKV 158
>gi|83571370|ref|ZP_00922810.1| COG2731: Beta-galactosidase, beta subunit [Shigella dysenteriae
1012]
Length = 155
Score = 57.0 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 20 ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENT 79
E+ ++FL+ D +L G +I+G ++ + E HR+Y+DI +
Sbjct: 19 EKALDFLRATDFNALEPGVAEIDGKNIYAQIIDLTTREAVENRPEVHRRYIDIQFLAWGE 78
Query: 80 EDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSGECLITFPEDLHQPK-VRVN 136
E + ++ + VS+ ++DI Y + + E I + G I FP+D+H+P +
Sbjct: 79 EKIGIAIDTGNNKVSESLLAQRDIIFYHDSEHESFIEMIPGSYAIFFPQDVHRPGCIMQT 138
Query: 137 DLPLKKVVFKVAIS 150
++K+V KVA++
Sbjct: 139 ASEIRKIVVKVALT 152
>gi|118071243|ref|ZP_01539439.1| conserved hypothetical protein 22 [Shewanella woodyi ATCC 51908]
gi|118024305|gb|EAV38113.1| conserved hypothetical protein 22 [Shewanella woodyi ATCC 51908]
Length = 153
Score = 56.6 bits (135), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ ++N + Y + P + + L D L G ++EG +F Y +
Sbjct: 1 MILDTLSNANLYSHLTPRLTKALAHLTETDFTQLEVGSYELEGKDIFVIVNDYETKPKEV 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQ----LIHLK 116
+ FE H++Y+D+ V+ E+ + T S+PY + D ++ + + I K
Sbjct: 61 EPFEVHQEYIDVQFVVSGEEEFGYLPLADQTPSRPYFAKHDYAEFDYESNKDDAAFIPFK 120
Query: 117 SGECLITFPEDLHQP 131
+G I FP+D+H P
Sbjct: 121 AGMFAIFFPQDMHMP 135
>gi|156860113|gb|EDO53544.1| hypothetical protein BACUNI_02822 [Bacteroides uniformis ATCC 8492]
Length = 185
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 25 FLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDF----FETHRKYLDIHLVLENTE 80
FL DL +L G I L G C++ V++ P + E+H +++D+ VL E
Sbjct: 59 FLAEHDLEALSIGNHVI----LEGKCWATVSEYIPKEVEKGNIESHLRFVDLQYVLWGNE 114
Query: 81 DMAVSSVKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGECLITFPEDLHQPKVRVNDLPL 140
M ++S V Q YN +KD+ Y + +G + FP D+HQP VR +
Sbjct: 115 KMGLAS--DVEVRQAYNSKKDVAFYTSSRIKHYSADAGSFFLFFPSDIHQPSVRGKGELV 172
Query: 141 K--KVVFKV 147
K K+V K+
Sbjct: 173 KSRKIVIKI 181
>gi|59714075|ref|YP_206850.1| hypothetical protein VFA0892 [Vibrio fischeri ES114]
gi|59482323|gb|AAW87962.1| conserved hypothetical protein [Vibrio fischeri ES114]
Length = 156
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 64 ETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEG-KVEQLIHLKSGECLI 122
E H KYLD+ L+LE +E S ++ Y +EKDI K EQ + L GE +I
Sbjct: 64 EIHHKYLDVQLLLEGSETFGYSEYPLISIEDDYLEEKDIAFSNDVKDEQFVTLGKGEFII 123
Query: 123 TFPEDLHQPKVRVNDLP--LKKVVFKV 147
P+ H+P V VND P +KK++ KV
Sbjct: 124 FNPKQPHRPLVAVNDTPAAVKKLIIKV 150
>gi|109947665|ref|YP_664893.1| hypothetical protein Hac_1133 [Helicobacter acinonychis str.
Sheeba]
gi|109714886|emb|CAJ99894.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 178
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 19 FERLINFLKTVDLG-SLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLE 77
++R++N + L G IE C +V + + G FFE+HR+Y+D LV++
Sbjct: 38 YQRVLNLAPNTEFQVPLEHGMFSIEQSY----CLEHVRESEKG-FFESHRQYVDFQLVVK 92
Query: 78 NTEDMAVSSVKSTTVSQPYNKEKDIELYEG-KVEQLIHLKSGECLITFPEDLH 129
E V +K T+ PY+ +KD+ +YE K +HL + + F D+H
Sbjct: 93 GIEGAKVVDIKKATMKTPYDGKKDLIVYEPVKEASFLHLNASMLAVFFESDVH 145
>gi|156935590|ref|YP_001439506.1| hypothetical protein ESA_03454 [Enterobacter sakazakii ATCC
BAA-894]
gi|156935609|ref|YP_001439524.1| hypothetical protein ESA_03474 [Enterobacter sakazakii ATCC
BAA-894]
gi|156533844|gb|ABU78670.1| hypothetical protein ESA_03454 [Enterobacter sakazakii ATCC
BAA-894]
gi|156533863|gb|ABU78689.1| hypothetical protein ESA_03474 [Enterobacter sakazakii ATCC
BAA-894]
Length = 150
Score = 55.8 bits (133), Expect = 8e-07, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 4/152 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ I+ L ++ P+ E + + V + P GK +++G++LF +
Sbjct: 1 MIIGNIHALGEWLPA-PFREAIEQVKQQVTPQTAP-GKYELDGNRLFFLLSEDTTEPLAD 58
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE-LYEGKVEQLIHLKSGE 119
E H +YLDI +VL E M S++ + +KDI L EG E+ + L+ G+
Sbjct: 59 RRAEYHARYLDIQIVLAGREGMTFSTLPPGAPDTDWLADKDIAFLPEGVQEKTVVLEEGD 118
Query: 120 CLITFPEDLHQPKVRVND-LPLKKVVFKVAIS 150
+I +P ++H+P V D P++K V K+ ++
Sbjct: 119 FVIFWPGEVHKPLCAVGDPAPVRKAVVKMLMA 150
>gi|16131447|ref|NP_418033.1| conserved protein [Escherichia coli K12]
gi|89110436|ref|AP_004216.1| hypothetical protein [Escherichia coli W3110]
gi|586715|sp|P37673|YIAL_ECOLI Protein yiaL
gi|466714|gb|AAB18553.1| unnamed protein product [Escherichia coli]
gi|1790001|gb|AAC76600.1| conserved protein [Escherichia coli K12]
gi|85676467|dbj|BAE77717.1| conserved hypothetical protein [Escherichia coli W3110]
Length = 155
Score = 55.8 bits (133), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 20 ERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENT 79
E+ ++FL+ D +L G ++I+G ++ + E HR+Y+DI +
Sbjct: 19 EKALDFLRATDFNALEPGVVEIDGKNIYTQIIDLTTREAVVNRPEVHRRYIDIQFLAWGE 78
Query: 80 EDMAVS-SVKSTTVSQPYNKEKDIELY-EGKVEQLIHLKSGECLITFPEDLHQPK-VRVN 136
E + ++ + VS+ ++++I Y + + E I + G I FP+D+H+P +
Sbjct: 79 EKIGIAIDTGNNKVSESLLEQRNIIFYHDSEHESFIEMIPGSYAIFFPQDVHRPGCIMQT 138
Query: 137 DLPLKKVVFKVAIS 150
++K+V KVA++
Sbjct: 139 ASEIRKIVVKVALT 152
>gi|16763268|ref|NP_458885.1| hypothetical protein STY4806 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29144747|ref|NP_808089.1| hypothetical protein t4502 [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
gi|25302798|pir||AC1060 conserved hypothetical protein STY4806 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16505576|emb|CAD06928.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29140386|gb|AAO71949.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
Length = 150
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV I +L ++ + I + + GK DI+GD+LF + +
Sbjct: 1 MIVGNIEHLEAWLPTA--LRQAIEHVNAHVTATTAPGKYDIDGDRLFYMISENMTEPGES 58
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKV-EQLIHLKSGE 119
E H +YLDI +VL+ E MA S+ + T + +KDI V E+ + L G+
Sbjct: 59 RSAEYHARYLDIQIVLQGQEGMAFSTRPAGTPHTDWLADKDIAFLPTSVDEKTVVLNEGD 118
Query: 120 CLITFPEDLHQPKVRVND-LPLKKVVFKVAIS 150
++ +P ++H+P V + ++K V K+ ++
Sbjct: 119 FVVFYPGEVHKPLCAVGEPARVRKAVVKMLMA 150
>gi|62182893|ref|YP_219310.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62130526|gb|AAX68229.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
Length = 150
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 37 GKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPY 96
GK DI+GD+LF + + E H +YLDI +VL+ E MA S+ + T +
Sbjct: 35 GKYDIDGDRLFYMISENMTEPGESRSAEYHARYLDIQIVLQGQEGMAFSTRPAGTPHTDW 94
Query: 97 NKEKDIELYEGKV-EQLIHLKSGECLITFPEDLHQPKVRVND-LPLKKVVFKVAIS 150
+KDI V E+ + L G+ ++ +P ++H+P V + ++K V K+ ++
Sbjct: 95 LADKDIAFLPTSVDEKTVVLNEGDFVVFYPGEVHKPLCAVGEPARVRKAVVKMLMA 150
>gi|114564712|ref|YP_752226.1| conserved hypothetical protein 22 [Shewanella frigidimarina NCIMB
400]
gi|114336005|gb|ABI73387.1| conserved hypothetical protein 22 [Shewanella frigidimarina NCIMB
400]
Length = 153
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 4/135 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV + N Y ++P + + L D L G +EG +F Y +
Sbjct: 1 MIVDTLANRHLYTQLSPRLAKALAHLADTDFSQLEVGNYPLEGKDIFVIVNDYETKPKEI 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQ----LIHLK 116
+ FE H++Y+D+ V+ E+ + + T S+PY + D Y + + I LK
Sbjct: 61 EPFEVHQQYIDVQYVVSGEEEFGYLPLANQTPSKPYFDKHDYAEYGYESNKDDAAFIPLK 120
Query: 117 SGECLITFPEDLHQP 131
+G + FP D+H P
Sbjct: 121 AGMFALFFPGDIHMP 135
>gi|16767713|ref|NP_463328.1| putative cytoplasmic protein [Salmonella typhimurium LT2]
gi|16423032|gb|AAL23287.1| putative cytoplasmic protein [Salmonella typhimurium LT2]
Length = 150
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 37 GKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPY 96
GK DI+GD+LF + + E H +YLDI +VL+ E MA S+ + T +
Sbjct: 35 GKYDIDGDRLFYMISENMTEPGESRSAEYHARYLDIQIVLQGQEGMAFSTRPAGTPHTDW 94
Query: 97 NKEKDIELYEGKV-EQLIHLKSGECLITFPEDLHQPKVRVND-LPLKKVVFKVAIS 150
+KDI V E+ + L G+ ++ +P ++H+P V + ++K V K+ ++
Sbjct: 95 LADKDIAFLPTSVDEKTVVLNEGDFVVFYPGEVHKPLCAVGEPARVRKAVVKMLMA 150
>gi|15611463|ref|NP_223114.1| hypothetical protein jhp0395 [Helicobacter pylori J99]
gi|4154922|gb|AAD05970.1| putative [Helicobacter pylori J99]
Length = 178
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 50 CFSYVADGQPGDFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKV 109
C + +G+ G FFE+HR+Y+D L+++ E V+ + + PY++++D+ +YE
Sbjct: 66 CLEHAKEGEKG-FFESHRQYVDFQLIIKGVEGAKVADINRAVIKTPYDEKRDLIVYEPVS 124
Query: 110 E-QLIHLKSGECLITFPEDLH 129
E +HL +G I D H
Sbjct: 125 EASFLHLDAGMLAIFLENDAH 145
>gi|50119342|ref|YP_048509.1| hypothetical protein ECA0383 [Erwinia carotovora subsp. atroseptica
SCRI1043]
gi|49609868|emb|CAG73302.1| conserved hypothetical protein [Erwinia carotovora subsp.
atroseptica SCRI1043]
Length = 155
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI +++L + I ++K P GK DIEG+ +F + D
Sbjct: 1 MITGNVHHLDLVPYLPAKLREAIEYVKQNITADTPLGKHDIEGNSVFVLISNDSTDLLEK 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE-LYEGKVEQLIHLKSGE 119
E H KYLDI +VL E M S++ + + +KDI L G+ E+L ++ G+
Sbjct: 61 RRAEYHAKYLDIQIVLSGVEGMTFSNLPAGKPDTDWLADKDIAFLPAGEQEKLFVMQEGD 120
Query: 120 CLITFPEDLHQPKVRVND-LPLKKVVFKVAIS 150
++ FP ++H+P V + ++K V K+ S
Sbjct: 121 FVVFFPGEVHKPLCAVGEPAHVRKAVVKIDAS 152
>gi|123440867|ref|YP_001004858.1| hypothetical protein YE0492 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087828|emb|CAL10614.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 152
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI I++L + + I ++K+ P GK DI+G+ LF + D
Sbjct: 1 MITGNIHHLELLPYLPAQLKEAIEYVKSHITAETPLGKHDIDGNNLFVLISNDSTDYLEN 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKV-EQLIHLKSGE 119
E H KYLDI +VL E M S++ + + +KDI V E+ +++G+
Sbjct: 61 RRAEYHAKYLDIQIVLAGVEGMTFSNLPAGKPDTDWLADKDIAFLPAGVDEKQFVMQAGD 120
Query: 120 CLITFPEDLHQPKVRVND-LPLKKVVFKVAI 149
++ +P ++H+P V + ++K V K+A+
Sbjct: 121 FVVFYPGEVHKPLCAVGEPARVRKAVVKLAV 151
>gi|149001965|ref|ZP_01826919.1| hypothetical protein CGSSp14BS69_09651 [Streptococcus pneumoniae
SP14-BS69]
gi|147759774|gb|EDK66764.1| hypothetical protein CGSSp14BS69_09651 [Streptococcus pneumoniae
SP14-BS69]
Length = 150
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI ++ N++ Y G++P ++ I++L S GK +I+GDK+F V +
Sbjct: 1 MIFDDLKNITFYKGIHPNLDKAIDYLYQHRKDSFELGKYEIDGDKVFLVVQENVLNQVEN 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSS-VKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGE 119
+ FE H+ Y D+HL++E E + S +K V+ +++ DI + L
Sbjct: 61 NQFEHHKNYADLHLLIEGHEYSSYGSRIKDEAVA--FDEATDIGFVHCHEHYPLLLGYHN 118
Query: 120 CLITFPEDLHQPKVRVN-DLPLKKVVFKVAI 149
I FP + HQP + + ++K +FK+ I
Sbjct: 119 FAIFFPGEPHQPNGYASMEEKVRKYLFKILI 149
>gi|148988727|ref|ZP_01820160.1| hypothetical protein CGSSp6BS73_09384 [Streptococcus pneumoniae
SP6-BS73]
gi|148997731|ref|ZP_01825295.1| hypothetical protein CGSSp11BS70_02449 [Streptococcus pneumoniae
SP11-BS70]
gi|149011457|ref|ZP_01832704.1| hypothetical protein CGSSp19BS75_08602 [Streptococcus pneumoniae
SP19-BS75]
gi|149021225|ref|ZP_01835471.1| hypothetical protein CGSSp23BS72_00325 [Streptococcus pneumoniae
SP23-BS72]
gi|147756230|gb|EDK63272.1| hypothetical protein CGSSp11BS70_02449 [Streptococcus pneumoniae
SP11-BS70]
gi|147764447|gb|EDK71378.1| hypothetical protein CGSSp19BS75_08602 [Streptococcus pneumoniae
SP19-BS75]
gi|147925928|gb|EDK77003.1| hypothetical protein CGSSp6BS73_09384 [Streptococcus pneumoniae
SP6-BS73]
gi|147930326|gb|EDK81310.1| hypothetical protein CGSSp23BS72_00325 [Streptococcus pneumoniae
SP23-BS72]
Length = 150
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI ++ N++ Y G++P ++ I++L S GK +I+GDK+F V +
Sbjct: 1 MIFDDLKNITFYKGIHPNLDKAIDYLYQHRKDSFELGKYEIDGDKVFLVVQENVLNQVEN 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSS-VKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGE 119
+ FE H+ Y D+HL++E E + S +K V+ +++ DI + L
Sbjct: 61 NQFEHHKNYADLHLLIEGHEYSSYGSRIKDEAVA--FDEASDIGFVHCHEHYPLLLGYHN 118
Query: 120 CLITFPEDLHQPKVRVN-DLPLKKVVFKVAI 149
I FP + HQP + ++K +FK+ I
Sbjct: 119 FAIFFPGEPHQPNGYAGMEEKVRKYLFKILI 149
>gi|148984118|ref|ZP_01817413.1| hypothetical protein CGSSp3BS71_02817 [Streptococcus pneumoniae
SP3-BS71]
gi|147923407|gb|EDK74520.1| hypothetical protein CGSSp3BS71_02817 [Streptococcus pneumoniae
SP3-BS71]
Length = 150
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI ++ N++ Y G++P ++ I++L S GK +I+GDK+F V +
Sbjct: 1 MIFDDLKNITFYKGIHPNLDKAIDYLYQHRKDSFELGKYEIDGDKVFLVVQENVLNQVEN 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSS-VKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGE 119
+ FE H+ Y D+HL++E E + S +K V+ +++ DI + L
Sbjct: 61 NQFEHHKNYADLHLLIEGHEYSSYGSRIKDEAVA--FDEASDIGFVHCHEHYPLLLGYHN 118
Query: 120 CLITFPEDLHQPKVRVN-DLPLKKVVFKVAI 149
I FP + HQP + ++K +FK+ I
Sbjct: 119 FAIFFPGEPHQPTGYAGMEEKVRKYLFKILI 149
>gi|148993747|ref|ZP_01823174.1| hypothetical protein CGSSp9BS68_02458 [Streptococcus pneumoniae
SP9-BS68]
gi|147927703|gb|EDK78727.1| hypothetical protein CGSSp9BS68_02458 [Streptococcus pneumoniae
SP9-BS68]
Length = 150
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI ++ N++ Y G++P ++ I++L S GK +I+GDK+F V +
Sbjct: 1 MIFDDLKNITFYKGIHPNLDKAIDYLYQHRRDSFELGKYEIDGDKVFLVVQENVLNQVEN 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSS-VKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGE 119
+ FE H+ Y D+HL++E E + S +K V+ +++ DI + L
Sbjct: 61 NQFEHHKNYADLHLLIEGHEYSSYGSRIKEEAVA--FDEASDIGFVHCYEHYPLLLGYHN 118
Query: 120 CLITFPEDLHQPKVRVN-DLPLKKVVFKVAI 149
I FP + HQP + ++K +FK+ I
Sbjct: 119 FAIFFPGEPHQPNGYAGMEEKVRKYLFKILI 149
>gi|116515454|ref|YP_816948.1| hypothetical protein SPD_1492 [Streptococcus pneumoniae D39]
gi|116076030|gb|ABJ53750.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
Length = 150
Score = 53.9 bits (128), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI ++ N++ Y G++P ++ I++L S GK +I+GDK+F V +
Sbjct: 1 MIFDDLKNITFYKGIHPNLDKAIDYLYQHRKDSFELGKYEIDGDKVFLVVQENVLNQVEN 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSS-VKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGE 119
+ FE H+ Y D+HL++E E + S +K V+ +++ DI + L
Sbjct: 61 NQFEHHKNYADLHLLIEGHEYSSYGSRIKDEAVA--FDEATDIGFVHCHEHYPLLLGYHN 118
Query: 120 CLITFPEDLHQPKVRVN-DLPLKKVVFKVAI 149
I FP + HQP + ++K +FK+ I
Sbjct: 119 FAIFFPGEPHQPNGYAGMEEKVRKYLFKILI 149
>gi|15641563|ref|NP_231195.1| hypothetical protein VC1555 [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|153823107|ref|ZP_01975774.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|9656062|gb|AAF94709.1| conserved hypothetical protein [Vibrio cholerae O1 biovar eltor
str. N16961]
gi|126519362|gb|EAZ76585.1| conserved hypothetical protein [Vibrio cholerae B33]
Length = 170
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVAD-GQP 59
M + I ++P +RLIN + LP GK +++GD F F + D QP
Sbjct: 15 MFIGHITQRQFCAALSPQLQRLINEVLQRVAAPLPTGKHELQGDSAF---FLVMEDHTQP 71
Query: 60 GDF--FETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQ-LIHLK 116
E H +YLD+ ++L+ E S + + + +D+ VE+ + L
Sbjct: 72 LALRRSECHARYLDVQILLQGRERFGYSLAPFSGLDEDLLATRDVAFSAQLVEERFVDLA 131
Query: 117 SGECLITFPEDLHQPKVRV--NDLPLKKVVFKV 147
+G+ ++ +P H+P + V P++KVV KV
Sbjct: 132 AGDFIVFYPGQPHRPLIAVEGEGEPVRKVVIKV 164
>gi|146310118|ref|YP_001175192.1| conserved hypothetical protein 22 [Enterobacter sp. 638]
gi|145316994|gb|ABP59141.1| conserved hypothetical protein 22 [Enterobacter sp. 638]
Length = 150
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MIV I++L +++ + I +K + GK DI+G+ N F V++
Sbjct: 1 MIVGNIHHLQSWLPEE--LRQAIEHIKAHVTDATTLGKHDIDGN----NLFYLVSEDMTQ 54
Query: 61 DFFET----HRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIE-LYEGKVEQLIHL 115
F E H +YLDI +VL+ E M S++ T + +KDI L EG+ E+ + L
Sbjct: 55 PFAERRAEYHARYLDIQIVLKGQEGMTFSTLPHGTPDTDWLADKDIAFLPEGEQEKTVVL 114
Query: 116 KSGECLITFPEDLHQPKVRVNDLP-LKKVVFKVAI 149
G+ ++ +P ++H+P V ++KVV K+ +
Sbjct: 115 NEGDFVVFYPGEVHKPLCAVGSAAQVRKVVVKMLV 149
>gi|90407239|ref|ZP_01215426.1| hypothetical cytosolic protein [Psychromonas sp. CNPT3]
gi|90311662|gb|EAS39760.1| hypothetical cytosolic protein [Psychromonas sp. CNPT3]
Length = 155
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI+ N+ + Y + + ++FL DL +L G+ +I+G+ +F N S+ +
Sbjct: 1 MILGHRNDEALYKLLPSALQSALDFLNKTDLKALSLGRHEIQGEDIFANVMSFDSVPASQ 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELY---EGKVEQLIHLKS 117
E H++Y+D+ ++ E + +SQ Y+KE D L E K E + L +
Sbjct: 61 KEAEVHQQYIDLQCLISGEEKIEFGLAAHYELSQAYDKENDFALVVNIENKSE--VVLCA 118
Query: 118 GECLITFPEDLHQPKVRVNDLP-LKKVVFKV 147
+ FP H+P V + +KK+V K+
Sbjct: 119 DMFAVFFPGQPHKPGCIVTEKANIKKIVVKI 149
>gi|153891391|ref|ZP_02012409.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
gi|151582548|gb|EDN46083.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
Length = 155
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 37 GKIDIEGDKLFGNCFSYVADGQPGDF-FETHRKYLDIHLVLENTEDMAVS-SVKSTTVSQ 94
GK I GDK++ N S + G+ FE H++Y D+H + E +A S + T S
Sbjct: 40 GKTSILGDKVWVNGISKNGCPKAGEMEFEYHKRYADVHWCMTGEETIAWSPNADGMTPSG 99
Query: 95 PYNKEKDIELYEGKVEQLIHLKSGEC-LITFPEDLHQPKV 133
+ KD + G V ++HLK G+C +I FP + H P +
Sbjct: 100 AFETSKDCGMLRGAVSNVVHLK-GDCFVILFPGEPHAPLI 138
>gi|56416239|ref|YP_153314.1| hypothetical protein SPA4268 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|56130496|gb|AAV80002.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
Length = 150
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 37 GKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPY 96
GK DI+GD+LF + + E H +YLDI +VL+ E MA S+ + T +
Sbjct: 35 GKYDIDGDRLFYMISENMTEPGESRSAEYHARYLDIQIVLQGQEGMAFSTRPAGTPHTDW 94
Query: 97 NKEKDIELYEGKV-EQLIHLKSGECLITFPEDLHQPKVRVND-LPLKKVVFKVAIS 150
+KDI V E+ + L + ++ +P ++H+P V + ++K V K+ I+
Sbjct: 95 LADKDIAFLPTSVDEKTVVLNESDFVVFYPGEVHKPLCAVGEPARVRKAVVKMLIA 150
>gi|52426261|ref|YP_089398.1| EbgC protein [Mannheimia succiniciproducens MBEL55E]
gi|52308313|gb|AAU38813.1| EbgC protein [Mannheimia succiniciproducens MBEL55E]
Length = 155
Score = 53.5 bits (127), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 24 NFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPGDFFETHRKYLDIHLVLENTEDMA 83
++LKT+DL +L G+ +I + +F N + +D E H +Y+DI LV+ + M
Sbjct: 24 DYLKTLDLSALENGRHEIN-ENIFMNVMTPTSDAAENKKSELHHRYIDIQLVISGLDGME 82
Query: 84 VSSVKSTTVS-QPYNKEKDIELYEGKV--EQLIHLKSGECLITFPEDLHQPKVRVN-DLP 139
S + + Y++E+D +L ++ + I ++ + ++ +P + H+P VN
Sbjct: 83 YSVTEPALEKYEEYHQEEDYQLTAAEIADKNWIVVRPNQFVVFYPYEQHKPCCNVNGQAE 142
Query: 140 LKKVVFKVAIS 150
LKK+V KV ++
Sbjct: 143 LKKLVVKVPVA 153
>gi|116188601|ref|ZP_01478371.1| hypothetical protein VchoM_02002478 [Vibrio cholerae MO10]
gi|121591373|ref|ZP_01678657.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121726935|ref|ZP_01680136.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147675741|ref|YP_001217107.1| hypothetical protein VC0395_A1161 [Vibrio cholerae O395]
gi|153221928|ref|ZP_01952773.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|153818903|ref|ZP_01971570.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|121546771|gb|EAX56942.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121630697|gb|EAX63084.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|124119286|gb|EAY38029.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|126510573|gb|EAZ73167.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|146317624|gb|ABQ22163.1| conserved hypothetical protein [Vibrio cholerae O395]
Length = 156
Score = 53.1 bits (126), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVAD-GQP 59
M + I ++P +RLIN + LP GK +++GD F F + D QP
Sbjct: 1 MFIGHITQRQFCAALSPQLQRLINEVLQRVAAPLPTGKHELQGDSAF---FLVMEDHTQP 57
Query: 60 GDF--FETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQ-LIHLK 116
E H +YLD+ ++L+ E S + + + +D+ VE+ + L
Sbjct: 58 LALRRSECHARYLDVQILLQGRERFGYSLAPFSGLDEDLLATRDVAFSAQLVEERFVDLA 117
Query: 117 SGECLITFPEDLHQPKVRV--NDLPLKKVVFKV 147
+G+ ++ +P H+P + V P++KVV KV
Sbjct: 118 AGDFIVFYPGQPHRPLIAVEGEGEPVRKVVIKV 150
>gi|77960169|ref|ZP_00824057.1| COG2731: Beta-galactosidase, beta subunit [Yersinia mollaretii ATCC
43969]
Length = 156
Score = 53.1 bits (126), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI + + + G+ + ++ +L + L L G+ +I+G+ LF N + D QP
Sbjct: 1 MISGSLTQTAFFCGLPERLQWVLAYLAELPLADLSCGRHEIDGELLFMNVMEF--DTQPA 58
Query: 61 DF--FETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKVEQ-LIHLKS 117
+ E HR Y DI L++ E + S++ T +PY+ + D +L ++ + +
Sbjct: 59 ESKKAEMHRSYADIQLLISGIEGIEYSTLTPTEHLEPYHADDDYQLIADIPDKSQLRMLP 118
Query: 118 GECLITFPEDLHQPKVRV-NDLPLKKVVFKV 147
G + P + H+P ++ +KKVV KV
Sbjct: 119 GMFALFLPGEPHKPGCQIAGSGTIKKVVVKV 149
>gi|77960003|ref|ZP_00823907.1| COG2731: Beta-galactosidase, beta subunit [Yersinia mollaretii ATCC
43969]
Length = 152
Score = 52.4 bits (124), Expect = 8e-06, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI I++L + + I ++K+ P GK DI+G+ LF + D
Sbjct: 1 MITGNIHHLELLPYLPTQLKDAIEYVKSHITAETPLGKHDIDGNNLFVLISNDSTDYLEN 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSSVKSTTVSQPYNKEKDIELYEGKV-EQLIHLKSGE 119
E H KYLDI ++L E M S+ + + +KDI V E+ I L++G+
Sbjct: 61 RRAEYHAKYLDIQIILAGIEGMTFSNQPAGKPDTDWLADKDIAFLPAGVDEKQIVLQAGD 120
Query: 120 CLITFPEDLHQPKVRVND-LPLKKVVFKVAI 149
++ +P ++H+P V + ++K V KV +
Sbjct: 121 FVVFYPGEVHKPLCAVGEPAHVRKAVVKVFV 151
>gi|15903567|ref|NP_359117.1| hypothetical protein spr1524 [Streptococcus pneumoniae R6]
gi|15459187|gb|AAL00328.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
Length = 150
Score = 52.4 bits (124), Expect = 8e-06, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 1 MIVTEINNLSTYVGVNPYFERLINFLKTVDLGSLPEGKIDIEGDKLFGNCFSYVADGQPG 60
MI ++ N++ Y G++P ++ I++L S GK +I+GDK+F V +
Sbjct: 1 MIFDDLKNITFYKGIHPNLDKAIDYLYQHRKDSFELGKYEIDGDKVFLVVQENVLNQVEN 60
Query: 61 DFFETHRKYLDIHLVLENTEDMAVSS-VKSTTVSQPYNKEKDIELYEGKVEQLIHLKSGE 119
+ FE H+ + D+HL++E E + S +K V+ +++ DI + L
Sbjct: 61 NQFEHHKNHADLHLLIEGHEYSSYGSRIKDEAVA--FDEATDIGFVHCHEHYPLLLGYHN 118
Query: 120 CLITFPEDLHQPKVRVN-DLPLKKVVFKVAI 149
I FP + HQP + ++K +FK+ I
Sbjct: 119 FAIFFPGEPHQPNGYAGMEEKVRKYLFKILI 149
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.318 0.139 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 566,016,949
Number of Sequences: 5470121
Number of extensions: 23489015
Number of successful extensions: 50084
Number of sequences better than 1.0e-05: 155
Number of HSP's better than 0.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 49890
Number of HSP's gapped (non-prelim): 156
length of query: 150
length of database: 1,894,087,724
effective HSP length: 113
effective length of query: 37
effective length of database: 1,275,964,051
effective search space: 47210669887
effective search space used: 47210669887
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 124 (52.4 bits)