BLASTP 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= PGN_0231 probable delta-aminolevulinic acid dehydratase
(394 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
6,515,104 sequences; 2,222,278,849 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|63107064|emb|CAI94411.1| hypothetical protein [Porphyrom... 821 0.0
gi|34539981|ref|NP_904460.1| hypothetical protein PG0116 [P... 760 0.0
gi|63107069|emb|CAI94415.1| hypothetical protein [Porphyrom... 750 0.0
gi|150006715|ref|YP_001301458.1| hypothetical protein BDI_0... 637 0.0
gi|150003272|ref|YP_001298016.1| hypothetical protein BVU_0... 630 e-179
gi|163787523|ref|ZP_02181970.1| hypothetical protein FBALC1... 496 e-138
gi|163789275|ref|ZP_02183717.1| hypothetical protein FBALC1... 392 e-107
gi|118581264|ref|YP_902514.1| hypothetical protein Ppro_285... 270 1e-70
gi|145619208|ref|ZP_01775260.1| conserved hypothetical prot... 264 9e-69
gi|94969616|ref|YP_591664.1| hypothetical protein Acid345_2... 236 2e-60
gi|116748412|ref|YP_845099.1| hypothetical protein Sfum_096... 216 2e-54
gi|15640942|ref|NP_230573.1| hypothetical protein VC0926 [V... 216 2e-54
gi|121587681|ref|ZP_01677443.1| hypothetical protein VC2740... 216 3e-54
gi|153213842|ref|ZP_01949048.1| hypothetical protein A55_10... 216 3e-54
gi|116217533|ref|ZP_01483331.1| hypothetical protein VchoR_... 216 3e-54
gi|116221438|ref|ZP_01486846.1| hypothetical protein VchoV5... 215 4e-54
gi|121728053|ref|ZP_01681091.1| hypothetical protein VCV52_... 214 8e-54
gi|153826140|ref|ZP_01978807.1| hypothetical protein A5A_09... 214 8e-54
gi|153828958|ref|ZP_01981625.1| hypothetical protein A59_09... 214 1e-53
gi|153802417|ref|ZP_01957003.1| hypothetical protein A51_B0... 213 1e-53
gi|187918770|ref|YP_001887801.1| conserved hypothetical pro... 196 2e-48
gi|171318344|ref|ZP_02907503.1| conserved hypothetical prot... 188 5e-46
gi|172062734|ref|YP_001810385.1| conserved hypothetical pro... 187 1e-45
gi|91779588|ref|YP_554796.1| hypothetical protein Bxe_B0501... 183 2e-44
gi|147676720|ref|YP_001210935.1| hypothetical protein PTH_0... 179 3e-43
gi|73663832|ref|YP_300078.1| hypothetical protein Mbar_B374... 160 1e-37
gi|18104612|gb|AAL59617.1|AF457646_2 hypothetical protein [... 151 6e-35
gi|73667606|ref|YP_303621.1| hypothetical protein Mbar_A005... 149 3e-34
gi|94969897|ref|YP_591945.1| hypothetical protein Acid345_2... 134 2e-29
gi|126644958|ref|ZP_01717502.1| hypothetical protein ALPR1_... 101 8e-20
gi|158521840|ref|YP_001529710.1| hypothetical protein Dole_... 83 3e-14
>gi|63107064|emb|CAI94411.1| hypothetical protein [Porphyromonas gingivalis]
Length = 394
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/394 (100%), Positives = 394/394 (100%)
Query: 1 MLASFLKLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRR 60
MLASFLKLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRR
Sbjct: 1 MLASFLKLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRR 60
Query: 61 LALVPKEYNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSP 120
LALVPKEYNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSP
Sbjct: 61 LALVPKEYNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSP 120
Query: 121 GDYSGACRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQ 180
GDYSGACRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQ
Sbjct: 121 GDYSGACRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQ 180
Query: 181 FVIKDLHRTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTIS 240
FVIKDLHRTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTIS
Sbjct: 181 FVIKDLHRTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTIS 240
Query: 241 ACCAAQAEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLE 300
ACCAAQAEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLE
Sbjct: 241 ACCAAQAEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLE 300
Query: 301 HFFEADGTPKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNMQDKKG 360
HFFEADGTPKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNMQDKKG
Sbjct: 301 HFFEADGTPKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNMQDKKG 360
Query: 361 YFYYQMKPGLSSKIPYMRWSNAFMFCAMSYYLLD 394
YFYYQMKPGLSSKIPYMRWSNAFMFCAMSYYLLD
Sbjct: 361 YFYYQMKPGLSSKIPYMRWSNAFMFCAMSYYLLD 394
>gi|34539981|ref|NP_904460.1| hypothetical protein PG0116 [Porphyromonas gingivalis W83]
gi|34396292|gb|AAQ65359.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
Length = 407
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/394 (91%), Positives = 381/394 (96%)
Query: 1 MLASFLKLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRR 60
MLASFLKLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKR PINLRR
Sbjct: 1 MLASFLKLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRSPINLRR 60
Query: 61 LALVPKEYNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSP 120
LALVPKEYNAKGIGLFLQGYCNLYRLV + P+L+++LGS E+LL ++K+LADLLLELRSP
Sbjct: 61 LALVPKEYNAKGIGLFLQGYCNLYRLVERNPQLTKELGSREELLEQVKKLADLLLELRSP 120
Query: 121 GDYSGACRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQ 180
GDYSGAC GYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYE+T +Q YLDVALSAAQ
Sbjct: 121 GDYSGACWGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEVTRQQEYLDVALSAAQ 180
Query: 181 FVIKDLHRTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTIS 240
FVIKDLHRTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDE YRTLARQTIS
Sbjct: 181 FVIKDLHRTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEAYRTLARQTIS 240
Query: 241 ACCAAQAEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLE 300
ACCAAQAEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGD SFA++IERGL+YYLE
Sbjct: 241 ACCAAQAEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDISFAENIERGLSYYLE 300
Query: 301 HFFEADGTPKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNMQDKKG 360
HFFEADG PKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHR+L+DRVM WTI +MQDKKG
Sbjct: 301 HFFEADGMPKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHRELVDRVMAWTISSMQDKKG 360
Query: 361 YFYYQMKPGLSSKIPYMRWSNAFMFCAMSYYLLD 394
YFYYQMKPGLSSKIPYMRWSNAFMFCAMSYYL++
Sbjct: 361 YFYYQMKPGLSSKIPYMRWSNAFMFCAMSYYLIN 394
>gi|63107069|emb|CAI94415.1| hypothetical protein [Porphyromonas gingivalis]
Length = 381
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/379 (94%), Positives = 371/379 (97%)
Query: 16 GFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKEYNAKGIGL 75
GFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKR PINLRRLALVPKEYNAKGIGL
Sbjct: 1 GFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRSPINLRRLALVPKEYNAKGIGL 60
Query: 76 FLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGDYSGACRGYNFDWQ 135
FLQGYCNLYRLVMQ PELSEQLGSGEKLLCR+K+LADLLLELRSPGDY GAC GYNFDWQ
Sbjct: 61 FLQGYCNLYRLVMQRPELSEQLGSGEKLLCRVKKLADLLLELRSPGDYGGACWGYNFDWQ 120
Query: 136 ARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDLHRTAYRDGF 195
AR+LFLFPKYTPTVVATNFCATALMEAYE+T +Q+YLDVALSAAQFVIKDLHRTAYRDGF
Sbjct: 121 ARKLFLFPKYTPTVVATNFCATALMEAYEVTRQQQYLDVALSAAQFVIKDLHRTAYRDGF 180
Query: 196 LFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQAEDGSWVYG 255
LFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDE YRTLARQTISACCAAQAEDGSWVYG
Sbjct: 181 LFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEGYRTLARQTISACCAAQAEDGSWVYG 240
Query: 256 MLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEADGTPKYYHDR 315
MLPVQSWIDSFHTGYNLDALIAYQELTGD SFA++IERGL+YYLEHFFEADGTPKYYHDR
Sbjct: 241 MLPVQSWIDSFHTGYNLDALIAYQELTGDISFAENIERGLSYYLEHFFEADGTPKYYHDR 300
Query: 316 TYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNMQDKKGYFYYQMKPGLSSKIP 375
TYPIDIHCPGQLFVSLARLHRYDE+R+LLDR++ WTIDNMQDKKGYFYYQMKPGLSSKIP
Sbjct: 301 TYPIDIHCPGQLFVSLARLHRYDEYRELLDRIIAWTIDNMQDKKGYFYYQMKPGLSSKIP 360
Query: 376 YMRWSNAFMFCAMSYYLLD 394
YMRWSNAFMFCAMSYYLL+
Sbjct: 361 YMRWSNAFMFCAMSYYLLN 379
>gi|150006715|ref|YP_001301458.1| hypothetical protein BDI_0041 [Parabacteroides distasonis ATCC
8503]
gi|149935139|gb|ABR41836.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
Length = 397
Score = 637 bits (1642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 295/390 (75%), Positives = 341/390 (87%), Gaps = 1/390 (0%)
Query: 4 SFLKLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLAL 63
+F KLK YCE+E FKGWDPYDGLNSKVF+ALPLLK+SA+CRL+VIQGFKRCPINLR+LAL
Sbjct: 7 AFYKLKKYCEREDFKGWDPYDGLNSKVFQALPLLKKSAVCRLVVIQGFKRCPINLRKLAL 66
Query: 64 VPKEYNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGDY 123
VPKEYNAKGIGLFL GYCNLY+++ + PE ++LGS ++ +I ELA+LL+ L+S G Y
Sbjct: 67 VPKEYNAKGIGLFLSGYCNLYKVIEKHPEREKELGSKQECRQKITELANLLIALQSKG-Y 125
Query: 124 SGACRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVI 183
SG+C GYNFDWQARRLFLFPKYTPT+VATNFCATALMEAYEIT +YL+VALSAA F+I
Sbjct: 126 SGSCWGYNFDWQARRLFLFPKYTPTIVATNFCATALMEAYEITKHTKYLEVALSAADFII 185
Query: 184 KDLHRTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACC 243
KDLHRT+Y++GFLFSYSPL GNDTVFNASLLGARLLS+CYHYT EEYR LA QTI ACC
Sbjct: 186 KDLHRTSYKEGFLFSYSPLQGNDTVFNASLLGARLLSFCYHYTSKEEYRKLAVQTIRACC 245
Query: 244 AAQAEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFF 303
+ Q DG+WVYGMLPVQ+W+DSFHTGYNLDALIAYQE+TGD SF +IE+G YY++HFF
Sbjct: 246 SGQRNDGAWVYGMLPVQNWVDSFHTGYNLDALIAYQEMTGDESFKRYIEKGFNYYIQHFF 305
Query: 304 EADGTPKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNMQDKKGYFY 363
E DGTPKYY +R +PIDIHCPGQLFV+L+RLH + HR L +RVM WTI NMQDKKGYFY
Sbjct: 306 EQDGTPKYYDNRMFPIDIHCPGQLFVTLSRLHEFGNHRDLAERVMQWTILNMQDKKGYFY 365
Query: 364 YQMKPGLSSKIPYMRWSNAFMFCAMSYYLL 393
YQ+K G+SSKI YMRWSNAFMF AM +YLL
Sbjct: 366 YQLKSGISSKISYMRWSNAFMFNAMIHYLL 395
>gi|150003272|ref|YP_001298016.1| hypothetical protein BVU_0688 [Bacteroides vulgatus ATCC 8482]
gi|150004111|ref|YP_001298855.1| hypothetical protein BVU_1546 [Bacteroides vulgatus ATCC 8482]
gi|154491608|ref|ZP_02031234.1| hypothetical protein PARMER_01219 [Parabacteroides merdae ATCC
43184]
gi|160890121|ref|ZP_02071124.1| hypothetical protein BACUNI_02561 [Bacteroides uniformis ATCC 8492]
gi|167764598|ref|ZP_02436719.1| hypothetical protein BACSTE_02988 [Bacteroides stercoris ATCC
43183]
gi|149931696|gb|ABR38394.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
gi|149932535|gb|ABR39233.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
gi|154088409|gb|EDN87454.1| hypothetical protein PARMER_01219 [Parabacteroides merdae ATCC
43184]
gi|156860509|gb|EDO53940.1| hypothetical protein BACUNI_02561 [Bacteroides uniformis ATCC 8492]
gi|167697267|gb|EDS13846.1| hypothetical protein BACSTE_02988 [Bacteroides stercoris ATCC
43183]
Length = 397
Score = 630 bits (1624), Expect = e-179, Method: Compositional matrix adjust.
Identities = 291/393 (74%), Positives = 342/393 (87%), Gaps = 1/393 (0%)
Query: 1 MLASFLKLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRR 60
++ SF LK YCE EGFKGWDPYDGLNSKVF+ALP LK+SA+CRL+VIQGFKRCP+NLRR
Sbjct: 4 VINSFRLLKEYCENEGFKGWDPYDGLNSKVFQALPFLKKSAICRLVVIQGFKRCPVNLRR 63
Query: 61 LALVPKEYNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSP 120
LALVPKEYNAKGIGLFL GYCNLY V P+L+E LGS + L RI ELA+LL+ L+S
Sbjct: 64 LALVPKEYNAKGIGLFLSGYCNLYNAVKANPKLAESLGSPDSLKSRINELAELLISLQSK 123
Query: 121 GDYSGACRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQ 180
G YSGAC GYNFDWQARRLFLFPK+TPTVVA+NFCATALMEAYEIT E+R+L++ALSAA
Sbjct: 124 G-YSGACWGYNFDWQARRLFLFPKFTPTVVASNFCATALMEAYEITREKRFLEIALSAAH 182
Query: 181 FVIKDLHRTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTIS 240
FVI DLHRT Y+DGFLFSYSPL GNDTVFNASLLG+RLLS+CY YT +EEY LA Q+I
Sbjct: 183 FVINDLHRTEYKDGFLFSYSPLQGNDTVFNASLLGSRLLSFCYKYTGNEEYCELAEQSIK 242
Query: 241 ACCAAQAEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLE 300
ACC+ Q +G+WVYGMLPVQSW+DSFHTGYNLDALIAYQELTGD + +IE+G YY++
Sbjct: 243 ACCSGQKPNGAWVYGMLPVQSWVDSFHTGYNLDALIAYQELTGDNKYRKYIEKGFEYYIQ 302
Query: 301 HFFEADGTPKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNMQDKKG 360
+FFEA+G PKYY +RTYPIDIHCPGQL V+LARLH+ +E++++ ++V+ WTI NMQD+KG
Sbjct: 303 NFFEANGMPKYYDNRTYPIDIHCPGQLLVTLARLHKIEEYKEIAEKVIDWTIRNMQDRKG 362
Query: 361 YFYYQMKPGLSSKIPYMRWSNAFMFCAMSYYLL 393
YFYYQ+KPG+SSKI YMRWSNAF+F AMS+YLL
Sbjct: 363 YFYYQLKPGISSKISYMRWSNAFIFNAMSHYLL 395
>gi|163787523|ref|ZP_02181970.1| hypothetical protein FBALC1_03252 [Flavobacteriales bacterium
ALC-1]
gi|159877411|gb|EDP71468.1| hypothetical protein FBALC1_03252 [Flavobacteriales bacterium
ALC-1]
Length = 404
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/391 (61%), Positives = 303/391 (77%), Gaps = 5/391 (1%)
Query: 4 SFLKLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLAL 63
SFLKLK+YCE E FKGWDPYDG+NSKVF+ALPL K L RL IQGFKR PIN R++ L
Sbjct: 11 SFLKLKSYCESENFKGWDPYDGMNSKVFQALPL-KHWDLARLAWIQGFKRSPINFRKVLL 69
Query: 64 VPKEYNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGDY 123
VPKE+N KG+ LFL GYC LY L E G+ +LL RI EL++LLL LRS G Y
Sbjct: 70 VPKEHNTKGVALFLLGYCRLYMLA---ENGCEDFGTKAELLQRINELSELLLSLRSKG-Y 125
Query: 124 SGACRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVI 183
SG+ GYNFDWQARRLFLF K+TPTVVAT FC AL+E+Y+IT + L L+AA FV+
Sbjct: 126 SGSAWGYNFDWQARRLFLFKKHTPTVVATCFCVEALLESYKITKNETVLKETLTAADFVV 185
Query: 184 KDLHRTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACC 243
KDL RT + +G +FSYS LDGN+TV NASLLGA++LSY Y YT+++E+ LA+ + A C
Sbjct: 186 KDLSRTTHGNGVIFSYSVLDGNNTVINASLLGAKILSYSYKYTQNQEHANLAKLAVVAAC 245
Query: 244 AAQAEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFF 303
Q+EDGSW+YG+LPVQSWIDSFHTG+NLDA+ +YQ+ TGD +F ++++GL YYLE+FF
Sbjct: 246 DLQSEDGSWIYGLLPVQSWIDSFHTGFNLDAIESYQQNTGDYNFQTYLDKGLKYYLENFF 305
Query: 304 EADGTPKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNMQDKKGYFY 363
+G PKYYHD+T+PIDIHCP Q+ V+L++++ + + LL +V+ WTIDNMQ KKGYFY
Sbjct: 306 VDNGMPKYYHDKTFPIDIHCPAQVIVTLSKMNTFQHNETLLTKVLHWTIDNMQHKKGYFY 365
Query: 364 YQMKPGLSSKIPYMRWSNAFMFCAMSYYLLD 394
YQ + +SSKI YMRWSNAFMF AM++YLL+
Sbjct: 366 YQYRQAMSSKISYMRWSNAFMFNAMAHYLLE 396
>gi|163789275|ref|ZP_02183717.1| hypothetical protein FBALC1_00320 [Flavobacteriales bacterium
ALC-1]
gi|159875490|gb|EDP69552.1| hypothetical protein FBALC1_00320 [Flavobacteriales bacterium
ALC-1]
Length = 387
Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/392 (49%), Positives = 259/392 (66%), Gaps = 16/392 (4%)
Query: 4 SFLKLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLAL 63
S LK YCE++ FKGWDPYDGLNS + + +L +S RL+ IQ FKR PINLR +
Sbjct: 9 SLEALKNYCEKQEFKGWDPYDGLNSWLIQK-TILGKSRFIRLVWIQIFKRNPINLRYVFG 67
Query: 64 VPKEYNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGDY 123
+ K+YN KG+GLFL YCNLY+ L +I LA + L++ G Y
Sbjct: 68 IKKDYNPKGLGLFLSAYCNLYKK-----------DPKPTYLEKINFLAKKITSLQTEG-Y 115
Query: 124 SGACRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVI 183
+C GYNFDWQAR F PKYTPTVVAT F A AL+EAYEIT YL++ +SA++FV+
Sbjct: 116 KESCWGYNFDWQARAFFQ-PKYTPTVVATTFIADALIEAYEITKNDDYLNIVISASRFVL 174
Query: 184 KDLHRTAYRDG-FLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISAC 242
DL+++ DG F FSYSP+D N V+NA LLGA+LLS Y YTKDE A+ +S
Sbjct: 175 NDLNKSYDDDGDFTFSYSPID-NTQVYNAGLLGAKLLSLVYKYTKDENLINSAKSVVSYV 233
Query: 243 CAAQAEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHF 302
C Q EDGSW YG LP W+D+FHTGYNL+ + YQ+ +G+ F+ +I +G+ YYL F
Sbjct: 234 CKKQNEDGSWAYGTLPFHQWVDNFHTGYNLECIKTYQDASGNFDFSSNINKGIDYYLNTF 293
Query: 303 FEADGTPKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNMQDKKGYF 362
F +G KYY+++TYPID+H P QL +L + ++ L+D+V++WTI NMQ KKGYF
Sbjct: 294 FTKEGMSKYYNNKTYPIDVHAPAQLIATLHKNKNLKSNKALVDKVLSWTISNMQTKKGYF 353
Query: 363 YYQMKPGLSSKIPYMRWSNAFMFCAMSYYLLD 394
YQ + +SS+IPY+RW+ +MF A+SYY L+
Sbjct: 354 IYQKRRMISSRIPYIRWAQGWMFYALSYYNLE 385
>gi|118581264|ref|YP_902514.1| hypothetical protein Ppro_2858 [Pelobacter propionicus DSM 2379]
gi|118503974|gb|ABL00457.1| conserved hypothetical protein [Pelobacter propionicus DSM 2379]
Length = 394
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/383 (40%), Positives = 218/383 (56%), Gaps = 25/383 (6%)
Query: 8 LKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKE 67
L YC+ G++GWD +DGLNS++ + P S + RLI IQ FKR P+NLR+L LVPK
Sbjct: 28 LSRYCKAMGYQGWDNFDGLNSRIVDSAPF-HYSYILRLIWIQFFKRFPLNLRKLTLVPKG 86
Query: 68 YNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGDYSGAC 127
YN KG+ LF+ G LV SG+ K L D+L++L SPG Y+ C
Sbjct: 87 YNPKGLALFVSG------LVY----------SGQ--YDEAKSLIDILMKLSSPG-YNNVC 127
Query: 128 RGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDLH 187
GYNFDWQ+R+ FL PK TP +V T F AL++ Y+ T + +Y D+A+S F + +L
Sbjct: 128 WGYNFDWQSRK-FLTPKSTPNLVVTVFVVNALLDYYKATGDHKYFDLAVSGCNFYLDNLI 186
Query: 188 RTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQA 247
D F Y P V+N S+LGA L+ Y ++ +++ + A
Sbjct: 187 LFEDPDSLCFQYMP-GSRGKVYNVSMLGATALARVYQINRERALYDKSKKAMIYAIRALQ 245
Query: 248 EDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEADG 307
+D SW Y + +ID+FHTG+NL +L + E T D + ++ YYL+ F+ +
Sbjct: 246 KDYSWTYA--ENRKFIDNFHTGFNLVSLCKWMEYTDDYCWERELKGAYNYYLKTFWLENW 303
Query: 308 TPKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHR-KLLDRVMTWTIDNMQDKKGYFYYQM 366
PKYYH+ YPIDIHC Q V+L +L Y+ + +L ++ W I+NMQD GYFYYQ
Sbjct: 304 CPKYYHNSLYPIDIHCSAQGIVTLLKLMPYNTNSIELAGKIADWAINNMQDNSGYFYYQK 363
Query: 367 KPGLSSKIPYMRWSNAFMFCAMS 389
++ IPYMRWS A+MF A+S
Sbjct: 364 TRFYTNSIPYMRWSQAWMFYALS 386
>gi|145619208|ref|ZP_01775260.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
gi|144944491|gb|EDJ79564.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
Length = 397
Score = 264 bits (674), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 153/386 (39%), Positives = 214/386 (55%), Gaps = 16/386 (4%)
Query: 7 KLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPK 66
+L YC++ + G+DPYDGLNS V++A PL K S LCR+ +IQ KR P+NLR L +VP+
Sbjct: 21 ELFRYCKENDWAGFDPYDGLNSLVYQATPL-KNSKLCRIALIQALKRLPVNLRPLLMVPR 79
Query: 67 EYNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGDYSGA 126
N K + LFL + L +L L E L I+ + +LL LRSPG+
Sbjct: 80 LQNPKALALFLSAFVKLSKL---------GLLKDEGL---IQAMTELLAALRSPGNRYWN 127
Query: 127 CRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDL 186
GY+F WQ R L P+ +V T F A AL++A+ +T + R +++A SAA +++ +L
Sbjct: 128 W-GYSFPWQTRGE-LVPQGGANLVCTVFVANALLDAFYLTSDPRCIEMAGSAADYLLDEL 185
Query: 187 HRTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQ 246
+ T + FSY + + NA+ +GA LL Y + YR A + A Q
Sbjct: 186 YWTQGGELACFSYPLPTTHVPIHNANFMGAALLCRLAKYCGGKRYRDSALKVARYSAARQ 245
Query: 247 AEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEAD 306
DG+W YG P Q W+D+FHTGYNL AL F + G +Y ++FF D
Sbjct: 246 QPDGAWGYGESPSQGWVDNFHTGYNLCALHTIGHCAETGEFQGVLRLGFDFYRKNFFRQD 305
Query: 307 GTPKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDR-VMTWTIDNMQDKKGYFYYQ 365
G PKYYH+R YPIDIH Q +++ L E R V+TW +DNM D GYFYYQ
Sbjct: 306 GAPKYYHNRIYPIDIHSVAQSIITMLELKELSEQNLPQARSVLTWALDNMWDDNGYFYYQ 365
Query: 366 MKPGLSSKIPYMRWSNAFMFCAMSYY 391
+ P +KI YMRWS A+M A++ +
Sbjct: 366 LYPLFKNKISYMRWSQAWMLLALATF 391
>gi|94969616|ref|YP_591664.1| hypothetical protein Acid345_2589 [Acidobacteria bacterium
Ellin345]
gi|94551666|gb|ABF41590.1| conserved hypothetical protein [Acidobacteria bacterium Ellin345]
Length = 396
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 212/390 (54%), Gaps = 21/390 (5%)
Query: 3 ASFLKLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCP-INLRRL 61
+ L L + + + G +PYD LNS + R + + A + IQG KR ++LR+
Sbjct: 16 SPILALHHWLRERNYAGHEPYDLLNSPLLRKWAVHQPFAT---LFIQGGKRIGGVHLRQW 72
Query: 62 ALVPKEYNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPG 121
VP +N K + L L +C+L R SG + + +LLLELRSP
Sbjct: 73 LHVPPSHNPKALALVLSAFCDLAR-------------SGWFSRRHAEHVRNLLLELRSPH 119
Query: 122 DYSGACRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQF 181
+ S C GY++ + + R P ++P V T FCA AL++ I ++ +A SA +
Sbjct: 120 E-SDFCWGYDWHYVSLRGARMPAFSPNSVVTVFCAHALLDFANIYQDEESKAIAHSATNW 178
Query: 182 VIKDLHRTAYRD-GFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTIS 240
+ L+R+ D G SY+P D + +FN S L L + ++ +Y +LAR+ +
Sbjct: 179 LATRLNRSTDTDTGLCLSYTPND-HTRIFNNSALAGALFARIASDSRLPQYGSLARRIME 237
Query: 241 ACCAAQAEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLE 300
QA+DGSW YG+ Q WID+FHTGYNL AL+ YQ+LTGDTSF+ + RG +Y
Sbjct: 238 YLGNGQAKDGSWTYGVARSQQWIDTFHTGYNLCALLEYQQLTGDTSFSQALARGYDFYCS 297
Query: 301 HFFEADGTPKYYHDRTYPIDIHCPGQLFVSLARLHRYD-EHRKLLDRVMTWTIDNMQDKK 359
HFF DG P+Y+H+RTYPIDIH Q ++L D + +++ WTI ++++
Sbjct: 298 HFFCPDGAPRYFHNRTYPIDIHSCSQAILTLCAFAELDPDALSRAEQIARWTIQHLRNSD 357
Query: 360 GYFYYQMKPGLSSKIPYMRWSNAFMFCAMS 389
G F YQ+ P + PY+RWS A+M A++
Sbjct: 358 GSFGYQIHPHRVDRTPYIRWSQAWMLRALA 387
>gi|116748412|ref|YP_845099.1| hypothetical protein Sfum_0968 [Syntrophobacter fumaroxidans MPOB]
gi|116697476|gb|ABK16664.1| conserved hypothetical protein [Syntrophobacter fumaroxidans MPOB]
Length = 385
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 202/392 (51%), Gaps = 22/392 (5%)
Query: 4 SFLKLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLAL 63
S L ++ + E +KG+DP DGL+S R L + L ++ Q ++ P+NLR L
Sbjct: 10 SLLAVEKWVESHDYKGYDPSDGLSS-FLRVLTF--NNTLLERMLQQVGRQSPVNLRPLMG 66
Query: 64 VPKEYNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGDY 123
+ + KG G GY YRL E E+ LLC D L +SP Y
Sbjct: 67 IRPLESTKGRGYMAWGYLARYRLTGA-EEYKEK-----ALLC-----LDWLDRNKSP-RY 114
Query: 124 SGACRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVI 183
+ G +FD+ A R PK+ T+V T A +EAYE+ +R+L++ S +++
Sbjct: 115 AHHSWGNHFDY-ASRGGRMPKHESTIVWTGLIGQAFLEAYELFGLERHLEIIKSITNWIL 173
Query: 184 KDLHRTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACC 243
L R G SY ++ N++++GA L+ T D E ARQ + C
Sbjct: 174 -SLPREKTPLGTCLSYVAFK-QSSIHNSNMIGAAFLAGAARCTGDREALETARQAMEYAC 231
Query: 244 AAQAEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFF 303
Q DG+W YG WID+FHTGYNLD+L Y + D +FAD+++RG+ YY F
Sbjct: 232 GHQRADGAWYYGAGEKYRWIDNFHTGYNLDSLKRYIRFSADRTFADNLKRGIDYYSRTFI 291
Query: 304 EADGTPKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHRKLLD--RVMTWTIDNMQDKKGY 361
E DG PKYY R YP+DI C Q +LA D L +V WTIDNMQD+ G+
Sbjct: 292 EDDGFPKYYAQRAYPLDIQCASQAMETLAFFAE-DNPGNLGQACKVANWTIDNMQDRDGH 350
Query: 362 FYYQMKP-GLSSKIPYMRWSNAFMFCAMSYYL 392
FYY+M P G+ +K+P + W A M+ A+SY L
Sbjct: 351 FYYRMYPLGIKAKVPLIHWGQATMYRALSYLL 382
>gi|15640942|ref|NP_230573.1| hypothetical protein VC0926 [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|116189604|ref|ZP_01479353.1| hypothetical protein VchoM_02001485 [Vibrio cholerae MO10]
gi|153822118|ref|ZP_01974785.1| hypothetical protein A5E_1098 [Vibrio cholerae B33]
gi|9655383|gb|AAF94088.1| hypothetical protein VC_0926 [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|125619783|gb|EAZ48310.1| hypothetical protein VCMO10_0771 [Vibrio cholerae MO10]
gi|126520390|gb|EAZ77613.1| hypothetical protein A5E_1098 [Vibrio cholerae B33]
gi|150424459|gb|EDN16396.1| hypothetical protein A33_0865 [Vibrio cholerae AM-19226]
Length = 390
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 195/380 (51%), Gaps = 17/380 (4%)
Query: 15 EGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKEYNAKGIG 74
E F G+DP+DGLNS F+ LP+ K S L L IQ FKR PINLR VPK N KG+
Sbjct: 20 EQFAGYDPFDGLNSSWFKRLPISKDSTLG-LAWIQLFKRSPINLRPWLGVPKARNPKGVA 78
Query: 75 LFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGD-YSGACRGYNFD 133
LF+ G Y Q+ LL ++LA L+ R + GAC GY+FD
Sbjct: 79 LFILGLIEEY-----------QVTKDPALLTEAEQLAQWLVTQRCDEQIWHGACWGYHFD 127
Query: 134 WQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDLHRTAYRD 193
W+AR F+ PK P V+ T + + AL + ++T ++D+AL + F+ L T
Sbjct: 128 WKARAFFV-PKGKPNVITTVYVSRALHQLGQLTGRADWVDLALRSGDFIAGHL-LTQNES 185
Query: 194 GFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQAEDGSWV 253
G F+Y P + V NASL A L+ T +Y LA + AQA DGSW
Sbjct: 186 GEFFAYIPGE-TAFVHNASLWAAAWLAVVGRETSCPDYTELALRIARNSAQAQAADGSWA 244
Query: 254 YGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEADGTPKYYH 313
YG +ID FHTGYNL+AL + F + I RG +Y +H FEADGT KYYH
Sbjct: 245 YGTRHHHGFIDGFHTGYNLEALHLIRTTLATNEFDEAIARGFHFYKQHLFEADGTAKYYH 304
Query: 314 DRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNM-QDKKGYFYYQMKPGLSS 372
+ YP+D H Q ++L + + L+ RV+ I + ++ F YQ +
Sbjct: 305 NNPYPLDPHSVSQAIITLLSVGGEESDVVLVKRVIQRAIQTLYMPERDQFVYQRNKRWVN 364
Query: 373 KIPYMRWSNAFMFCAMSYYL 392
+I Y RW+ A+M+ + +YL
Sbjct: 365 RIHYARWTQAWMYLSFRFYL 384
>gi|121587681|ref|ZP_01677443.1| hypothetical protein VC274080_0998 [Vibrio cholerae 2740-80]
gi|147674949|ref|YP_001216402.1| hypothetical protein VC0395_A0451 [Vibrio cholerae O395]
gi|153223142|ref|ZP_01953680.1| hypothetical protein A53_1067 [Vibrio cholerae MAK 757]
gi|153817198|ref|ZP_01969865.1| hypothetical protein A5C_0940 [Vibrio cholerae NCTC 8457]
gi|121548053|gb|EAX58129.1| hypothetical protein VC274080_0998 [Vibrio cholerae 2740-80]
gi|124118393|gb|EAY37136.1| hypothetical protein A53_1067 [Vibrio cholerae MAK 757]
gi|126512232|gb|EAZ74826.1| hypothetical protein A5C_0940 [Vibrio cholerae NCTC 8457]
gi|146316832|gb|ABQ21371.1| hypothetical protein VC0395_A0451 [Vibrio cholerae O395]
Length = 377
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 195/380 (51%), Gaps = 17/380 (4%)
Query: 15 EGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKEYNAKGIG 74
E F G+DP+DGLNS F+ LP+ K S L L IQ FKR PINLR VPK N KG+
Sbjct: 7 EQFAGYDPFDGLNSSWFKRLPISKDSTLG-LAWIQLFKRSPINLRPWLGVPKARNPKGVA 65
Query: 75 LFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGD-YSGACRGYNFD 133
LF+ G Y Q+ LL ++LA L+ R + GAC GY+FD
Sbjct: 66 LFILGLIEEY-----------QVTKDPALLTEAEQLAQWLVTQRCDEQIWHGACWGYHFD 114
Query: 134 WQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDLHRTAYRD 193
W+AR F+ PK P V+ T + + AL + ++T ++D+AL + F+ L T
Sbjct: 115 WKARAFFV-PKGKPNVITTVYVSRALHQLGQLTGRADWVDLALRSGDFIAGHL-LTQNES 172
Query: 194 GFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQAEDGSWV 253
G F+Y P + V NASL A L+ T +Y LA + AQA DGSW
Sbjct: 173 GEFFAYIPGE-TAFVHNASLWAAAWLAVVGRETSCPDYTELALRIARNSAQAQAADGSWA 231
Query: 254 YGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEADGTPKYYH 313
YG +ID FHTGYNL+AL + F + I RG +Y +H FEADGT KYYH
Sbjct: 232 YGTRHHHGFIDGFHTGYNLEALHLIRTTLATNEFDEAIARGFHFYKQHLFEADGTAKYYH 291
Query: 314 DRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNM-QDKKGYFYYQMKPGLSS 372
+ YP+D H Q ++L + + L+ RV+ I + ++ F YQ +
Sbjct: 292 NNPYPLDPHSVSQAIITLLSVGGEESDVVLVKRVIQRAIQTLYMPERDQFVYQRNKRWVN 351
Query: 373 KIPYMRWSNAFMFCAMSYYL 392
+I Y RW+ A+M+ + +YL
Sbjct: 352 RIHYARWTQAWMYLSFRFYL 371
>gi|153213842|ref|ZP_01949048.1| hypothetical protein A55_1016 [Vibrio cholerae 1587]
gi|124115676|gb|EAY34496.1| hypothetical protein A55_1016 [Vibrio cholerae 1587]
Length = 390
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 195/380 (51%), Gaps = 17/380 (4%)
Query: 15 EGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKEYNAKGIG 74
E F G+DP+DGLNS F+ LP+ K S L IQ FKR PINLR VPK N KG+
Sbjct: 20 EQFAGYDPFDGLNSSWFKRLPISKDSTFG-LAWIQLFKRSPINLRPWLGVPKARNPKGVA 78
Query: 75 LFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGD-YSGACRGYNFD 133
LF+ G Y Q+ LL ++LA L+ R + GAC GY+FD
Sbjct: 79 LFILGLIEEY-----------QVTKDPALLTEAEQLAQWLVTQRCDEQIWHGACWGYHFD 127
Query: 134 WQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDLHRTAYRD 193
W+AR F+ PK P V+ T + + AL + ++T ++D+AL + F++ L T
Sbjct: 128 WKARAFFV-PKGKPNVITTVYVSRALHQLGQLTGRADWVDLALRSGDFIVGHL-LTQNES 185
Query: 194 GFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQAEDGSWV 253
G F+Y P + V NASL A L+ T +Y LA + AQA DGSW
Sbjct: 186 GEFFAYIPGE-TAFVHNASLWAAAWLAVVGRETSCPDYTELALRIARNSAQAQAADGSWA 244
Query: 254 YGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEADGTPKYYH 313
YG +ID FHTGYNL+AL + F + I RG +Y +H FEADGT KYYH
Sbjct: 245 YGTRHHHGFIDGFHTGYNLEALHLIRTTLATNEFDEVIARGFHFYKQHLFEADGTAKYYH 304
Query: 314 DRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNM-QDKKGYFYYQMKPGLSS 372
+ YP+D H Q ++L + + L+ RV+ I + ++ F YQ +
Sbjct: 305 NNPYPLDPHSVSQAIITLLSVGGEESDVVLVKRVIQRAIQTLYMPERDQFVYQRNKRWVN 364
Query: 373 KIPYMRWSNAFMFCAMSYYL 392
+I Y RW+ A+M+ + +YL
Sbjct: 365 RIHYARWTQAWMYLSFRFYL 384
>gi|116217533|ref|ZP_01483331.1| hypothetical protein VchoR_02000736 [Vibrio cholerae RC385]
gi|150420262|gb|EDN12561.1| hypothetical protein VCRC385_0632 [Vibrio cholerae RC385]
Length = 390
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 193/380 (50%), Gaps = 17/380 (4%)
Query: 15 EGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKEYNAKGIG 74
E F G+DP+DGLNS F+ LP+ K S L IQ FKR PINLR VPK N KG+
Sbjct: 20 EQFAGYDPFDGLNSSWFKRLPISKDSTFG-LAWIQLFKRSPINLRPWLGVPKARNPKGVA 78
Query: 75 LFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGD-YSGACRGYNFD 133
LF+ G Y Q+ LL ++LA L+ R + GAC GY+FD
Sbjct: 79 LFILGLIEEY-----------QVTKDPALLTEAEQLAQWLVTQRCDEQIWHGACWGYHFD 127
Query: 134 WQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDLHRTAYRD 193
W+AR F+ PK P V+ T + + AL + ++T ++D+AL + F+ L T
Sbjct: 128 WKARAFFV-PKGKPNVITTVYVSRALHQLGQLTGRADWVDLALRSGDFIAGHL-LTQNES 185
Query: 194 GFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQAEDGSWV 253
G F+Y P + V NASL A L+ T Y LA + AQA DGSW
Sbjct: 186 GEFFAYIPGE-TAFVHNASLWAAAWLAVVGRETSRPNYTELALRIARNSAQAQAADGSWA 244
Query: 254 YGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEADGTPKYYH 313
YG +ID FHTGYNL+AL + F + I RG +Y +H FEADGT KYYH
Sbjct: 245 YGTRHHHGFIDGFHTGYNLEALHLIRTTLATNEFDEAIARGFHFYKQHLFEADGTAKYYH 304
Query: 314 DRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNM-QDKKGYFYYQMKPGLSS 372
+ YP+D H Q ++L + + L+ RV+ I + ++ F YQ +
Sbjct: 305 NNPYPLDSHSVSQAIITLLSVGGEESDVVLVKRVIQRAIQTLYMPERDQFVYQRNKRWVN 364
Query: 373 KIPYMRWSNAFMFCAMSYYL 392
+I Y RW+ A+M+ + +YL
Sbjct: 365 RIHYARWTQAWMYLSFRFYL 384
>gi|116221438|ref|ZP_01486846.1| hypothetical protein VchoV5_02000573 [Vibrio cholerae V51]
gi|125621755|gb|EAZ50083.1| hypothetical protein VCV51_0638 [Vibrio cholerae V51]
Length = 390
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 195/380 (51%), Gaps = 17/380 (4%)
Query: 15 EGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKEYNAKGIG 74
E F G+DP+DGLNS F+ LP+ K S L L IQ FKR PINLR VPK N KG+
Sbjct: 20 EQFAGYDPFDGLNSSWFKRLPISKDSTLG-LAWIQLFKRSPINLRPWLGVPKARNPKGVA 78
Query: 75 LFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGD-YSGACRGYNFD 133
LF+ G Y Q+ LL ++LA L+ R + GAC GY+FD
Sbjct: 79 LFILGLIEEY-----------QVTKDPALLTEAEQLAQWLVTQRCDEQIWHGACWGYHFD 127
Query: 134 WQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDLHRTAYRD 193
W+AR F+ PK P V+ T + + AL + ++T ++D+AL + F+ L T
Sbjct: 128 WKARAFFV-PKGKPNVITTVYVSRALHQLGQLTGRADWVDLALRSGDFIAGHL-LTQNES 185
Query: 194 GFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQAEDGSWV 253
G F+Y P + V NASL A L+ T +Y LA + AQA DGSW
Sbjct: 186 GEFFAYIPGE-TAFVHNASLWAAAWLAVVGRETSCPDYTELALRIARNSAQAQAADGSWA 244
Query: 254 YGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEADGTPKYYH 313
YG +ID FHTGYNL+AL + F + I RG +Y +H FEADGT KYYH
Sbjct: 245 YGTRHHHGFIDGFHTGYNLEALHLIRTTLATNEFDEAIARGFHFYKQHLFEADGTAKYYH 304
Query: 314 DRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNM-QDKKGYFYYQMKPGLSS 372
+ YP+D H Q ++L + + L+ RV+ I + ++ F YQ +
Sbjct: 305 NNPYPLDPHSVSQAIITLLSVGGEESDVVLVKRVIQRAIQTLYMPERDQFVYQRNKRWVN 364
Query: 373 KIPYMRWSNAFMFCAMSYYL 392
+I Y RW+ A+M+ + +YL
Sbjct: 365 RIHYARWTQAWMYFSFRFYL 384
>gi|121728053|ref|ZP_01681091.1| hypothetical protein VCV52_0886 [Vibrio cholerae V52]
gi|121629682|gb|EAX62102.1| hypothetical protein VCV52_0886 [Vibrio cholerae V52]
Length = 390
Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 195/380 (51%), Gaps = 17/380 (4%)
Query: 15 EGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKEYNAKGIG 74
E F G+DP+DGLNS F+ LP+ K S L L IQ FKR PINLR VPK N KG+
Sbjct: 20 EQFAGYDPFDGLNSSWFKRLPISKDSTLG-LAWIQLFKRSPINLRPWLGVPKARNPKGVA 78
Query: 75 LFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGD-YSGACRGYNFD 133
LF+ G Y Q+ LL ++LA L+ R + GAC GY+FD
Sbjct: 79 LFILGLIEEY-----------QVTKDPALLTDAEQLAQWLVTQRCDEQIWHGACWGYHFD 127
Query: 134 WQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDLHRTAYRD 193
W+AR F+ PK P V+ T + + AL + ++T ++D+AL + F+ L T
Sbjct: 128 WKARAFFV-PKGKPNVITTVYVSRALHQLGQLTGRADWVDLALRSGDFIAGHL-LTQNES 185
Query: 194 GFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQAEDGSWV 253
G F+Y P + V NASL A L+ T +Y LA + AQA DGSW
Sbjct: 186 GEFFAYIPGE-TAFVHNASLWAAAWLAVVGRETSCPDYTELALRIARNSAQAQAADGSWA 244
Query: 254 YGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEADGTPKYYH 313
YG +ID FHTGYNL+AL + F + I RG +Y +H FEADGT KYYH
Sbjct: 245 YGTRHHHGFIDGFHTGYNLEALHLIRTTLATNEFDEVIARGFHFYKQHLFEADGTAKYYH 304
Query: 314 DRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNM-QDKKGYFYYQMKPGLSS 372
+ YP+D H Q ++L + + L+ RV+ I + ++ F YQ +
Sbjct: 305 NNPYPLDPHSVSQAIITLLSIGGEESDVVLVKRVIQRAIQTLYMPERDQFVYQRNKRWVN 364
Query: 373 KIPYMRWSNAFMFCAMSYYL 392
+I Y RW+ A+M+ + +YL
Sbjct: 365 RIHYARWTQAWMYFSFRFYL 384
>gi|153826140|ref|ZP_01978807.1| hypothetical protein A5A_0902 [Vibrio cholerae MZO-2]
gi|149740163|gb|EDM54322.1| hypothetical protein A5A_0902 [Vibrio cholerae MZO-2]
Length = 390
Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 195/380 (51%), Gaps = 17/380 (4%)
Query: 15 EGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKEYNAKGIG 74
E F G+DP+DGLNS F+ LP+ K S L L IQ FKR PINLR VPK N KG+
Sbjct: 20 EQFAGYDPFDGLNSSWFKRLPISKDSTLG-LAWIQLFKRSPINLRPWLGVPKARNPKGVA 78
Query: 75 LFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGD-YSGACRGYNFD 133
LF+ G Y Q+ LL ++LA L+ R + GAC GY+FD
Sbjct: 79 LFILGLIEEY-----------QVTKDPALLTDAEQLAQWLVTQRCDEQIWHGACWGYHFD 127
Query: 134 WQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDLHRTAYRD 193
W+AR F+ PK P V+ T + + AL + ++T ++D+AL + F+ L T
Sbjct: 128 WKARAFFV-PKGKPNVITTVYVSRALHQLGQLTGRADWVDLALRSGDFIAGHL-LTQNES 185
Query: 194 GFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQAEDGSWV 253
G F+Y P + V NASL A L+ T +Y LA + AQA DGSW
Sbjct: 186 GEFFAYIPGE-TAFVHNASLWAAAWLAVVGRETSCPDYTQLALRIARNSAQAQAADGSWA 244
Query: 254 YGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEADGTPKYYH 313
YG +ID FHTGYNL+AL + F + I RG +Y +H FEADGT KYYH
Sbjct: 245 YGTRHHHGFIDGFHTGYNLEALHLIRTTLATNEFDEVIARGFHFYKQHLFEADGTAKYYH 304
Query: 314 DRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNM-QDKKGYFYYQMKPGLSS 372
+ YP+D H Q ++L + + L+ RV+ I + ++ F YQ +
Sbjct: 305 NNPYPLDPHSVSQAIITLLSIGGEESDVVLVKRVIQRAIQTLYMPERDQFVYQRNKRWVN 364
Query: 373 KIPYMRWSNAFMFCAMSYYL 392
+I Y RW+ A+M+ + +YL
Sbjct: 365 RIHYARWTQAWMYFSFRFYL 384
>gi|153828958|ref|ZP_01981625.1| hypothetical protein A59_0934 [Vibrio cholerae 623-39]
gi|148875574|gb|EDL73709.1| hypothetical protein A59_0934 [Vibrio cholerae 623-39]
Length = 390
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 195/380 (51%), Gaps = 17/380 (4%)
Query: 15 EGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKEYNAKGIG 74
E F G+DP+DGLNS F+ LP+ K S L L IQ FKR PINLR VPK N KG+
Sbjct: 20 EQFAGYDPFDGLNSSWFKRLPISKDSTLG-LAWIQLFKRSPINLRPWLGVPKARNPKGVA 78
Query: 75 LFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGD-YSGACRGYNFD 133
LF+ G Y Q+ LL ++LA L+ R + GAC GY+FD
Sbjct: 79 LFILGLIEEY-----------QVTKDPALLTDAEQLAQWLVTQRCDEQIWHGACWGYHFD 127
Query: 134 WQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDLHRTAYRD 193
W+AR F+ PK P V+ T + + AL + ++T ++D+AL + F+ L T
Sbjct: 128 WKARAFFV-PKGKPNVITTVYVSRALHQLGQLTGRADWVDLALRSGDFIAGHL-LTQNES 185
Query: 194 GFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQAEDGSWV 253
G F+Y P + V NASL A L+ T +Y LA + AQA DGSW
Sbjct: 186 GEFFAYIPGE-TAFVHNASLWAAAWLAVVGRETSCPDYTELALRIARNSAQAQAADGSWA 244
Query: 254 YGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEADGTPKYYH 313
YG +ID FHTGYNL+AL + F + I RG +Y +H FEADGT KYYH
Sbjct: 245 YGTRHHHGFIDGFHTGYNLEALHLIRTTLATNEFDEVIARGFHFYKQHLFEADGTAKYYH 304
Query: 314 DRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNM-QDKKGYFYYQMKPGLSS 372
+ YP+D H Q ++L + + L+ RV+ I + ++ F YQ +
Sbjct: 305 NNPYPLDPHSVSQAIITLLSVGGEESDVVLVKRVIQRAIQTLYMPERDQFVYQRNKRWVN 364
Query: 373 KIPYMRWSNAFMFCAMSYYL 392
+I Y RW+ A+M+ + +YL
Sbjct: 365 RIHYARWTQAWMYFSFRFYL 384
>gi|153802417|ref|ZP_01957003.1| hypothetical protein A51_B0866 [Vibrio cholerae MZO-3]
gi|124122033|gb|EAY40776.1| hypothetical protein A51_B0866 [Vibrio cholerae MZO-3]
Length = 387
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 195/380 (51%), Gaps = 17/380 (4%)
Query: 15 EGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKEYNAKGIG 74
E F G+DP+DGLNS F+ LP+ K S + L IQ FKR PINLR VPK N KG+
Sbjct: 17 EQFAGYDPFDGLNSSWFKRLPISKDS-IFGLAWIQLFKRSPINLRPWLGVPKARNPKGVA 75
Query: 75 LFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGD-YSGACRGYNFD 133
LF+ G Y Q+ LL ++LA L+ R + GAC GY+FD
Sbjct: 76 LFILGLIEEY-----------QVTKDPALLTEAEQLAQWLVTQRCDEQIWHGACWGYHFD 124
Query: 134 WQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDLHRTAYRD 193
W+AR F+ PK P V+ T + + AL + ++T ++D+AL + F+ L T
Sbjct: 125 WKARAFFV-PKGKPNVITTVYVSRALHQLGQLTGRADWVDLALRSGDFIAGHL-LTQNES 182
Query: 194 GFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQAEDGSWV 253
G F+Y P + V NASL A L+ T +Y LA + AQA DGSW
Sbjct: 183 GEFFAYIPGE-TAFVHNASLWAAAWLAVVGRETSRPDYTELALRIARNSAQAQAADGSWA 241
Query: 254 YGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEADGTPKYYH 313
YG +ID FHTGYNL+AL + F + I RG +Y +H FEADGT KYYH
Sbjct: 242 YGTRHHHGFIDGFHTGYNLEALHLIRTTLAINEFDEVIARGFHFYKQHLFEADGTAKYYH 301
Query: 314 DRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNM-QDKKGYFYYQMKPGLSS 372
+ YP+D H Q ++L + + L+ RV+ I + ++ F YQ +
Sbjct: 302 NNPYPLDPHSVSQAIITLLSVGGEESDVVLVKRVIQRAIQTLYMPERDQFVYQRNKRWVN 361
Query: 373 KIPYMRWSNAFMFCAMSYYL 392
+I Y RW+ A+M+ + +YL
Sbjct: 362 RIHYARWTQAWMYFSFRFYL 381
>gi|187918770|ref|YP_001887801.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
gi|187717208|gb|ACD18431.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
Length = 388
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 191/382 (50%), Gaps = 20/382 (5%)
Query: 12 CEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKEYNAK 71
C G+ G+DP+DGLNS +F L L ++ +Q KR NLR L V + N K
Sbjct: 18 CRSTGYAGYDPFDGLNSVLFEKLGL-GCLPFAKIAWLQLHKRSLANLRPLVGVARRRNPK 76
Query: 72 GIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELR-SPGDYSGACRGY 130
GI L + G R V + E +G LAD LL+ R ++ + GY
Sbjct: 77 GIALIILGLLERERRVGDGWSIEEAVG-----------LADWLLDQRCDRKKWTHSAWGY 125
Query: 131 NFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDLHRTA 190
+FDW AR F+ P+ TP + T + A AL + T E+R+ D A A F I L+R
Sbjct: 126 HFDWAARAFFV-PRGTPNAITTCYIARALTALGDETGERRFTDAATDAG-FFIDSLYREG 183
Query: 191 YRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQAEDG 250
DG+ ++Y P + + V NA+L A ++ + A A Q EDG
Sbjct: 184 --DGY-YAYIPGE-SAFVHNANLWAAAVVGETASRVGNGALMQRALGAARRSVAMQREDG 239
Query: 251 SWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEADGTPK 310
+W YG S++D FHTGYNL+AL A Q G F+D I RG+AYY ++FF DGT K
Sbjct: 240 AWRYGTRDHHSFVDGFHTGYNLEALSALQRSAGTDEFSDAIGRGMAYYRQNFFLPDGTVK 299
Query: 311 YYHDRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNM-QDKKGYFYYQMKPG 369
YY + +P+D H Q ++L + DE +L DRV ++ + ++ F YQ
Sbjct: 300 YYDNAIWPLDTHSVAQALLTLLNVGASDEDHRLADRVFKRALNTLYMPRERRFMYQRGRL 359
Query: 370 LSSKIPYMRWSNAFMFCAMSYY 391
++I Y+RW+ A+ F A+ Y
Sbjct: 360 TKNRINYLRWTQAWAFYAIGAY 381
>gi|171318344|ref|ZP_02907503.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5]
gi|171096486|gb|EDT41384.1| conserved hypothetical protein [Burkholderia ambifaria MEX-5]
Length = 403
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 185/380 (48%), Gaps = 22/380 (5%)
Query: 10 TYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKEYN 69
+C + G DP+DGLNS++FR L K L + +Q KR P N R++ VP+ N
Sbjct: 16 AHCRRHAHAGHDPFDGLNSRLFRCTGLSKLP-LASIAWLQVHKRSPFNFRQILGVPRMRN 74
Query: 70 AKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKL--LCRIKELADLLLELR-SPGDYSGA 126
KG+ L + G E ++ G G L C L D LL R + +
Sbjct: 75 PKGVALIVLGLL----------EREQRTGDGANLDEAC---ALGDWLLAHRVDRTRWRHS 121
Query: 127 CRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDL 186
GY+FDW AR F+ P TP ++T + A AL T E R+ DVA+ A F + L
Sbjct: 122 AWGYHFDWAARAFFV-PVGTPNAISTCYVARALYALGIATGEARFTDVAIDAGHF-LDSL 179
Query: 187 HRTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQ 246
+ G+ F+Y P + V NA+L A ++ +D R A + Q
Sbjct: 180 YLPHQGSGY-FAYIPGE-RAFVHNANLWSAAFVAETGVRVRDTSMRERAMSAARLTASMQ 237
Query: 247 AEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEAD 306
EDG+W YG+ ++D FHTGYNL+AL Q G FA+ I+ GLAYY + FF +D
Sbjct: 238 REDGAWAYGLRDHHRFVDGFHTGYNLEALQRLQRTCGTQVFAESIDLGLAYYRDTFFLSD 297
Query: 307 GTPKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNM-QDKKGYFYYQ 365
GT KYY +P+D+H Q ++L + + L RV ++ + KG F YQ
Sbjct: 298 GTVKYYEGTIWPLDMHSVAQALITLLTVSTSEADYALAVRVFERAVETLYMPAKGRFVYQ 357
Query: 366 MKPGLSSKIPYMRWSNAFMF 385
+++I Y+RW+ A+ F
Sbjct: 358 RGARFTNRIDYLRWTQAWAF 377
>gi|172062734|ref|YP_001810385.1| conserved hypothetical protein [Burkholderia ambifaria MC40-6]
gi|171995251|gb|ACB66169.1| conserved hypothetical protein [Burkholderia ambifaria MC40-6]
Length = 403
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 187/383 (48%), Gaps = 22/383 (5%)
Query: 10 TYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKEYN 69
+C + G DP+DGLNS++FR L K + +Q KR P+N R++ VP+ N
Sbjct: 16 AHCRRHAHAGHDPFDGLNSRLFRWTGLSKLP-FASIAWLQVHKRSPLNFRQILGVPRMRN 74
Query: 70 AKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKL--LCRIKELADLLLELR-SPGDYSGA 126
KG+ L + G E ++ G G L C L D LL R + +
Sbjct: 75 PKGVALIVLGLL----------EREQRTGDGANLDEAC---ALGDWLLAHRVDRKRWRHS 121
Query: 127 CRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDL 186
GY+FDW AR F+ P TP ++T + A AL T + R+ DVA+ A F + L
Sbjct: 122 AWGYHFDWAARAFFV-PVGTPNAISTCYVARALYALGIATGDARFTDVAIDAGHF-LDSL 179
Query: 187 HRTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQ 246
+ G+ F+Y P + V NA+L A ++ +D R A + Q
Sbjct: 180 YLPHQGSGY-FAYIPGE-PAFVHNANLWSAAFVAETGARVRDTSMRERAMSAARLTVSMQ 237
Query: 247 AEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEAD 306
EDG+W YG+ ++D FHTGYNL+AL Q G FA I+ GLAYY + FF +D
Sbjct: 238 REDGAWAYGLRDHHGFVDGFHTGYNLEALQRLQHTCGTQVFAKSIDLGLAYYRDTFFLSD 297
Query: 307 GTPKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNM-QDKKGYFYYQ 365
GT KYY D +P+D+H Q ++L + + L RV ++ + KG F YQ
Sbjct: 298 GTVKYYDDTIWPLDMHSVAQALITLLTVSTSEADYALAVRVFERAVETLYMPAKGRFVYQ 357
Query: 366 MKPGLSSKIPYMRWSNAFMFCAM 388
++++ Y+RW+ A+ F ++
Sbjct: 358 RGARFTNRVDYLRWTQAWAFYSI 380
>gi|91779588|ref|YP_554796.1| hypothetical protein Bxe_B0501 [Burkholderia xenovorans LB400]
gi|91692248|gb|ABE35446.1| conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 402
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 188/385 (48%), Gaps = 26/385 (6%)
Query: 12 CEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKEYNAK 71
C + G+DP+DGLNS +F L L ++ +Q KR P+NLR LA + + N K
Sbjct: 18 CRATDYAGYDPFDGLNSVLFEKLGL-GSLPFAKIAWLQLHKRSPVNLRPLAGIARRRNPK 76
Query: 72 GIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELR-SPGDYSGACRGY 130
GI L + G R E+ E LA+ LL R ++ GY
Sbjct: 77 GIALIILGLLERERRTGDGWEIPE-----------AARLAEWLLGQRCDRSEWRHNAWGY 125
Query: 131 NFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDLHRTA 190
+FDW AR F+ P+ TP + T + A L + T QR++D A A FV L+R
Sbjct: 126 HFDWAARAFFV-PRGTPNAITTCYIARGLTALGDRTGNQRFIDAATDAGLFV-DSLYRKG 183
Query: 191 YRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISAC---CAAQA 247
DG+ ++Y P + V NA+L A ++ D TL + +SA A Q
Sbjct: 184 --DGY-YAYIPGE-PAFVHNANLWAAAVVGETASRVGDN---TLMHRALSAARLSVAMQR 236
Query: 248 EDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEADG 307
EDG+W YG S++D FHTGYNL+AL A Q G F + I G+ YY +FF DG
Sbjct: 237 EDGAWRYGTRDHHSFVDGFHTGYNLEALSALQRAAGTDEFDNAIRAGMDYYRRNFFLPDG 296
Query: 308 TPKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHRKLLDRVMTWTIDNM-QDKKGYFYYQM 366
T KYY +P+D H Q ++L ++ +E +L +V +++ + ++ F YQ
Sbjct: 297 TVKYYDHAVWPLDTHSVAQALLTLLKVGASNEDHRLATKVFERSVETLYMPRERRFMYQR 356
Query: 367 KPGLSSKIPYMRWSNAFMFCAMSYY 391
++I Y+RW+ A+ F A+ Y
Sbjct: 357 GRLTKNRINYLRWTQAWAFYAIETY 381
>gi|147676720|ref|YP_001210935.1| hypothetical protein PTH_0385 [Pelotomaculum thermopropionicum SI]
gi|146272817|dbj|BAF58566.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
Length = 395
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 186/395 (47%), Gaps = 27/395 (6%)
Query: 4 SFLKLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLAL 63
S +L + + E + GWDPYD LNS + + + + + ++ IQ + CPINLR +
Sbjct: 10 SIDRLFRWVKNENYLGWDPYDALNSNLVKKIT--RGNPYLEILSIQFNRYCPINLRPILQ 67
Query: 64 VPKEYNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCR--IKELADLLLELRSPG 121
+ K + KGI LF Q Y LY+ EQL E + C IKE + L+S
Sbjct: 68 INKGLDLKGIALFAQAYAKLYK------STQEQLYKDELIKCISFIKEKS-----LKSKY 116
Query: 122 DYSGACRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQF 181
++ Y F + + K P ++ T+ AL+ AY+I + ++AL A F
Sbjct: 117 NFHCWASHY-FPYTSLDKSGLTKVEPDIIGTSQSIIALIGAYKILGDDSLKEIALDACNF 175
Query: 182 VIKDLHRTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISA 241
+I L Y D + Y+ D + V NAS G + E + +
Sbjct: 176 IITQL-IDKYEDNYFVKYTLTDDHKVVINASAQGLEAMCEVLLIDYKREIVEICESIVHF 234
Query: 242 CCAAQAEDGSWVY-----GMLPVQSWIDSFHTGYNLDALIAYQELTGD-TSFADHIERGL 295
Q +DGSW Y G VQ FH GY +D L+A+ L+ + S +IE+G+
Sbjct: 235 LIRVQNKDGSWDYSIYKNGKTRVQL---DFHQGYIIDGLLAFYNLSQNKNSLYSYIEKGI 291
Query: 296 AYYLEHFFEADGTPKYYHDRTYPIDIHCPGQLFVSLARLHRYDEHRKLL-DRVMTWTIDN 354
+Y E F DG Y + +PIDIH Q ++ + ++ + K R+ WT+
Sbjct: 292 KFYREVLFLEDGQSYYRYPVRFPIDIHNQAQGIITFTKASNFNANNKAFAKRIADWTLSC 351
Query: 355 MQDKKGYFYYQMKPGLSSKIPYMRWSNAFMFCAMS 389
MQD+ GYFYYQ ++KIPYMRW A+M A+S
Sbjct: 352 MQDRAGYFYYQKYRLFTNKIPYMRWGQAWMMLALS 386
>gi|73663832|ref|YP_300078.1| hypothetical protein Mbar_B3747 [Methanosarcina barkeri str.
Fusaro]
gi|72394708|gb|AAZ68982.1| hypothetical protein Mbar_B3747 [Methanosarcina barkeri str.
Fusaro]
Length = 396
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 182/399 (45%), Gaps = 26/399 (6%)
Query: 4 SFLKLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLAL 63
S L + + E + GWDPYD LNS++ S L +++ Q K +N+R +
Sbjct: 10 SIKSLYEWVKSEEYYGWDPYDALNSEMINKF--CSDSQLLEILITQLNKYSILNIRPIIG 67
Query: 64 VPKEYNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGDY 123
+ K + KGI LF Q + +Y L + ++ + E ++L Y
Sbjct: 68 IEKGLDIKGISLFAQSFSKIYTLT-----------NDQRYKSDLFECTNILKNKSLKQKY 116
Query: 124 SGAC-RGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFV 182
C G+ F++++ + P V+ T+ A+ ++Y I + ++ SA F
Sbjct: 117 DFDCWAGHYFNYRSFDGSILTPDIPDVITTSNVIKAMADSYLIFKDDELKEIVKSAYDFF 176
Query: 183 IKDLHRTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISAC 242
I+ L + Y+ L N V NAS G + D E + +A +
Sbjct: 177 IRYLLEKTDEGLYYLKYNTLSENKIVINASAEGLSAICRLMPLFDDNEMKRIAFKLSEFL 236
Query: 243 CAAQAEDGSWVY-----GMLPVQSWIDSFHTGYNLDALIAY---QELTGDTSFADHIERG 294
Q DG W+Y G + Q+ FH G+ +D+L+ Y E + I+ G
Sbjct: 237 ICTQDSDGCWIYSKYKSGKVRRQT---DFHQGFIIDSLVEYLPFAEPKKQDQLIESIKLG 293
Query: 295 LAYYLEHFFEADGTPKYYHDRTYPIDIHCPGQLFVSLARLHRYD-EHRKLLDRVMTWTID 353
+++Y F +G Y + + YPIDIH Q ++ ++L +D E + +++ WTI
Sbjct: 294 VSFYRRKQFLDNGRCYYRYPKLYPIDIHNQAQGVITFSKLSAFDVEFLEFAKQILEWTIF 353
Query: 354 NMQDKKGYFYYQMKPGLSSKIPYMRWSNAFMFCAMSYYL 392
NMQD GYF+YQ L++KIPYMRW A+M AM+ YL
Sbjct: 354 NMQDNSGYFFYQKNRILTNKIPYMRWGAAWMMLAMATYL 392
>gi|18104612|gb|AAL59617.1|AF457646_2 hypothetical protein [Listonella anguillarum]
Length = 276
Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 136/260 (52%), Gaps = 16/260 (6%)
Query: 17 FKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKEYNAKGIGLF 76
+ G DP+DGLNSK F P + L L Q KR IN R + VP + N KGIGLF
Sbjct: 20 YAGKDPFDGLNSKFFYFFPR-ANTGLLGLFWTQLHKRSAINFRTVFFVPDKRNPKGIGLF 78
Query: 77 LQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGDYSG-ACRGYNFDWQ 135
+ G Y+ + L E + ELA+ LL +S G +C GY+FDW
Sbjct: 79 ILGLLENYQSTNEQSYLDEAV-----------ELANWLLTQQSDRTLWGHSCWGYHFDWN 127
Query: 136 ARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDLHRTAYRDGF 195
AR F+ PK P V+ T + A AL EI + +Y + A+ +A F++K L+ + F
Sbjct: 128 ARAFFV-PKGKPNVITTVYVAQALWALGEIINSDKYREPAIDSANFIVKHLYTELDGECF 186
Query: 196 LFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQAEDGSWVYG 255
FSY P + V+NASL GA ++ T + +Y+ L+ AQ+ DGSWVYG
Sbjct: 187 -FSYIPGE-TALVYNASLWGAAWVAKIASITGNSQYKKLSLAVARQSVLAQSYDGSWVYG 244
Query: 256 MLPVQSWIDSFHTGYNLDAL 275
+IDSFHTGYNL+AL
Sbjct: 245 TRHHHQFIDSFHTGYNLEAL 264
>gi|73667606|ref|YP_303621.1| hypothetical protein Mbar_A0051 [Methanosarcina barkeri str.
Fusaro]
gi|72394768|gb|AAZ69041.1| hypothetical protein Mbar_A0051 [Methanosarcina barkeri str.
Fusaro]
Length = 399
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 176/399 (44%), Gaps = 26/399 (6%)
Query: 4 SFLKLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLAL 63
S L + + + + GWDPYD LNSK L L S ++ Q K +N R L
Sbjct: 10 SIESLHKWVKDQAYYGWDPYDALNSKFI--LKLCMGSPSLEILATQINKYSIVNFRPLLR 67
Query: 64 VPKEYNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGDY 123
V K + KG+ LF Q Y +Y L ++ L L + K L + G
Sbjct: 68 VEKGIDVKGMALFAQAYSKMYTLTADENYKNDLLNC--MLFLKEKSLVSIY------GHD 119
Query: 124 SGACRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVI 183
A YNF + + L P P V+ T+ A +E+Y++ + +A S +F+
Sbjct: 120 CWAGHYYNFR-NSDKSILSPN-IPDVITTSNVIKAAVESYKVLKRNDLIKMARSGYEFLT 177
Query: 184 KDLHRTAYRDGFLF-SYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISAC 242
L + +DG+ + Y V NAS G + H D+ + +
Sbjct: 178 NSLLHES-KDGYFYLDYDSSSDGKIVINASAEGLSAICKLMHLFDDKNLKETSYNLAEFL 236
Query: 243 CAAQAEDGSWVY-----GMLPVQSWIDSFHTGYNLDALIAY---QELTGDTSFADHIERG 294
Q DGSW+Y G + +Q FH G+ +++L+ Y L I+ G
Sbjct: 237 ITNQNTDGSWIYSKYNNGKIRIQL---DFHQGFIINSLLEYLPFAALNQKDRIISSIKNG 293
Query: 295 LAYYLEHFFEADGTPKYYHDRTYPIDIHCPGQLFVSLARLHRYD-EHRKLLDRVMTWTID 353
+Y E F DGT + + + YPIDIH Q ++ ++L ++ E ++ WTI
Sbjct: 294 AKFYKEKQFFEDGTCHFRYPQKYPIDIHNQAQGIITFSKLAPFNNEFSNFSLKIALWTIL 353
Query: 354 NMQDKKGYFYYQMKPGLSSKIPYMRWSNAFMFCAMSYYL 392
NMQ++ GYFYYQ + IP++RW A+M A++ YL
Sbjct: 354 NMQNRAGYFYYQKYRIFRNNIPHIRWGQAWMMLALATYL 392
>gi|94969897|ref|YP_591945.1| hypothetical protein Acid345_2870 [Acidobacteria bacterium
Ellin345]
gi|94551947|gb|ABF41871.1| hypothetical protein Acid345_2870 [Acidobacteria bacterium
Ellin345]
Length = 401
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 169/385 (43%), Gaps = 19/385 (4%)
Query: 7 KLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPK 66
+L + ++G++P D ++ F+ P KQ + LI + R+ VP
Sbjct: 26 ELAVWLRDHYYQGYEPSDLRSAPSFQK-PFFKQPGISHLIDYLS-EHSGRRARKFLSVPL 83
Query: 67 EYNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGDYSGA 126
Y + L L LY +L I L LL LR P +
Sbjct: 84 SYTPTTLALALGACAELYPF-------------DPGVLPTIIVLRGELLRLRHPSE-KEY 129
Query: 127 CRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDL 186
C G +D + R P + P + C +A+M E ++ + VA S ++ I L
Sbjct: 130 CWGDEYDDRFARDLNAPVFKPDTFVSYLCGSAMMTLAEKVRDESAVAVAESVGRYFITRL 189
Query: 187 HRTA-YRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAA 245
+R+ D FS SP D + +F+ S L L+ + + +++EY LA + ++ A
Sbjct: 190 NRSVDESDEMCFSTSP-DDQEKIFHKSALVGSFLARLWQWNRNDEYLELAVRAMNFLRNA 248
Query: 246 QAEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEA 305
Q G W YG+ + I++ HT YN+ A+ Y+ +GD +F D I G + FFE
Sbjct: 249 QLATGMWYYGLGEEKRNINAIHTSYNVIAMNDYRFYSGDRNFDDTIFNGNEAFKRVFFET 308
Query: 306 DGTPKYYHDRTYPIDIHCPGQLFVSLARLHRYD-EHRKLLDRVMTWTIDNMQDKKGYFYY 364
DG PK + R YP+D+ Q + + + D + ++ WT+ NM++ F Y
Sbjct: 309 DGKPKMFVHRLYPVDVRACSQAIEHFSAMMKDDIDAPDRAISILQWTLQNMRNPDNSFAY 368
Query: 365 QMKPGLSSKIPYMRWSNAFMFCAMS 389
+ + ++ Y+ W A MF AMS
Sbjct: 369 RKYATGTQRMAYVAWGQAHMFYAMS 393
>gi|126644958|ref|ZP_01717502.1| hypothetical protein ALPR1_09970 [Algoriphagus sp. PR1]
gi|126578369|gb|EAZ82533.1| hypothetical protein ALPR1_09970 [Algoriphagus sp. PR1]
Length = 372
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 158/383 (41%), Gaps = 42/383 (10%)
Query: 7 KLKTYCEQEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPK 66
++ T + F+G DPYD +SKV L+ + + K PIN R+ +
Sbjct: 7 RIVTNLSVKDFRGIDPYDFASSKVNLPSQLISKLSFLN-------KISPINFRKALGIVD 59
Query: 67 EYNAKGIGLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGDYSGA 126
YN+K LFLQ C +Y + K I L + L+E RS ++
Sbjct: 60 SYNSKSNALFLQALC-IYDPI--------------KFSTEIDYLINWLIENRSI-EFEEY 103
Query: 127 CRGYNFDWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDL 186
G+ F+ R P T +++ F A EAY+ + ++ LD +S + +
Sbjct: 104 SVGFAFEMALSRYQSGPGKTSLIISL-FTMFAFFEAYKNSGNKKLLDCIISFEELLSSKW 162
Query: 187 HRTAYRDGFLFSYSPLDGNDTVFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQ 246
+ FSY P + D V+NA+ R + Y E+ + + ++ + Q
Sbjct: 163 LKFEDDYTLWFSYLP-NQKDEVYNATAKVGRFYALYYKIFPSEDLKNKLLKILNYLVSVQ 221
Query: 247 AEDGSWVYGMLPVQSWIDSFHTGYNLDALIAYQELTGDTSFADHIERGLAYYLEHFFEAD 306
DGSW Y + ++D+FHT + L+++ E+ E LA Y+ + F
Sbjct: 222 NPDGSWGYSV--KNPYVDNFHTVFMLESIYHMHEVVNTDKSNLMFESALADYITNCF-IG 278
Query: 307 GTPKYYHDRTYPIDIHCP---------GQLFVSLARLHRYDEHRKLLDRVMTWTIDNMQD 357
P ++H YP DI + +++ + D +L+ W + N D
Sbjct: 279 PRPLHFHTMHYPKDIRSKLIDTEIRDIANAIILFSKIGQIDRAETILN----WAVSNYYD 334
Query: 358 KK-GYFYYQMKPGLSSKIPYMRW 379
K GYFY+ SKI Y+RW
Sbjct: 335 SKDGYFYFFQNRIYKSKINYVRW 357
>gi|158521840|ref|YP_001529710.1| hypothetical protein Dole_1829 [Desulfococcus oleovorans Hxd3]
gi|158510666|gb|ABW67633.1| conserved hypothetical protein [Desulfococcus oleovorans Hxd3]
Length = 388
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 152/381 (39%), Gaps = 37/381 (9%)
Query: 14 QEGFKGWDPYDGLNSKVFRALPLLKQSALCRLIVIQGFKRCPINLRRLALVPKEYNAKGI 73
++GFK +D YDG KV PLL+Q R+ K P N R + + K +
Sbjct: 17 EQGFKSYDIYDGSGLKV----PLLRQLKSGRMASTYFNKFSPFNFRTVLGISKRKYPHAV 72
Query: 74 GLFLQGYCNLYRLVMQWPELSEQLGSGEKLLCRIKELADLLLELRSPGDYSGAC-RGYNF 132
+ Y N V + PE IKE + L+ Y C G
Sbjct: 73 ACMVDAYFNC--PVDRIPE------------DFIKEQFEWLISKSLKDRYGFHCWNGLGI 118
Query: 133 DWQARRLFLFPKYTPTVVATNFCATALMEAYEITHEQRYLDVALSAAQFVIKDLHRTAYR 192
+ + P P ++ T+ A L Y+ T ++R ++ L + ++ + + Y
Sbjct: 119 SIDMKGGGIKPD-IPGLIGTSAVARVLCAYYQKTADERIPEI-LRSVRYDLLTNYFQMYS 176
Query: 193 DGFLFSYSPLDGNDT-VFNASLLGARLLSYCYHYTKDEEYRTLARQTISACCAAQAEDGS 251
F Y P+ NAS GA L+ + H +++ +S+ +Q +DG
Sbjct: 177 GFSFFRYKPVTPPWVFTINASAKGAALICHINHILGEDQGLEQVASAVSSILDSQEKDGK 236
Query: 252 WVY------GMLPVQSWIDSFHTGYNLDALI-AYQELTGDTSFADHIERGLAYYLEHFFE 304
W Y G VQ+ FH Y + AL+ + D AD I RG+ + +
Sbjct: 237 WKYTMDLKNGRHKVQT---DFHQAYIIKALLDIHHSGMLDIPLADAIIRGIDFQNKTQLL 293
Query: 305 ADGTPKYYHDRTYPIDIHCPGQLF---VSLARLHRYDEHRKLLDRVMTWTIDNMQDKKGY 361
+ G Y H YP +IH QL+ V+ A + + + ++ W + ++ D
Sbjct: 294 SSGAIYYRHPVKYPFNIH--NQLYAFYVNKAASFLDKSYDRKGELILDWALKHLYDSGLG 351
Query: 362 FYYQMKPGLSSKIPYMRWSNA 382
F Y P + +IPY RW NA
Sbjct: 352 FIYGAYPAIKIRIPYARWGNA 372
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: May 10, 2008 4:54 AM
Number of letters in database: 884,634,002
Number of sequences in database: 2,620,852
Database: /apps/blastdb/nr.01
Posted date: May 10, 2008 4:52 AM
Number of letters in database: 976,814,986
Number of sequences in database: 2,761,530
Database: /apps/blastdb/nr.02
Posted date: May 10, 2008 4:46 AM
Number of letters in database: 360,829,861
Number of sequences in database: 1,132,722
Lambda K H
0.325 0.140 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,811,154,671
Number of Sequences: 6515104
Number of extensions: 76552488
Number of successful extensions: 211672
Number of sequences better than 1.0e-04: 31
Number of HSP's better than 0.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 211516
Number of HSP's gapped (non-prelim): 33
length of query: 394
length of database: 2,222,278,849
effective HSP length: 136
effective length of query: 258
effective length of database: 1,336,224,705
effective search space: 344745973890
effective search space used: 344745973890
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 123 (52.0 bits)