Seven up (svp)

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UGID:100191 UniGene Dm.20676 Drosophila melanogaster (fruit fly) svp

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Seven up (svp)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_731681.1	seven up CG11502-PA, isoform A	D. melanogaster	100.0	745
NP_001083835.1	COUP transcription factor 1	X. laevis	87.4	390
NP_033827.2	nuclear receptor subfamily 2, group F, member 2 isoform 1	M. musculus	87.2	399
NP_066285.1	nuclear receptor subfamily 2, group F, member 2	H. sapiens	87.2	399
NP_956886.1	nuclear receptor protein	D. rerio	83.9	366

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	cDNA Sources:	uncharacterized tissue; mixed; blood; testis; whole body; head

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	3R
	Map position:	87B4-87B5

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

M28863.1	D.melanogaster seven-up protein (svp) type 1 mRNA, complete cds	PA
M28864.1	Drosophila melanogaster seven-up protein type 2 (svp) mRNA, partial cds	P
AY075272.1	Drosophila melanogaster AT29920 full length cDNA	PA
NM_079601.2	Drosophila melanogaster seven up CG11502-RB, transcript variant B (svp), mRNA	P
AY119490.1	Drosophila melanogaster GH08189 full insert cDNA	A
AY129452.1	Drosophila melanogaster RE08410 full insert cDNA	PA
NM_169459.1	Drosophila melanogaster seven up CG11502-RC, transcript variant C (svp), mRNA	P
NM_169458.1	Drosophila melanogaster seven up CG11502-RA, transcript variant A (svp), mRNA	P

EST sequences (10 of 21) [Show all sequences]

AI108883.1	Clone GH08189	head	5' read
BF490358.2	Clone AT26810	testis	5' read	P
BG633933.1	Clone AT29920	testis	5' read	P
BI167911.1	Clone RE08410	whole body	5' read
BI362626.1	Clone RE47250	whole body	5' read
CK131114.1	Clone AT29920	testis	3' read	A
CO263990.1	Clone EK137111	mixed	5' read
CO284129.1	Clone EK165326	mixed	5' read	P
CO325440.1	Clone EK196524	mixed	5' read
CO328021.1	Clone EP08434	mixed	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria