BLASTP 2.2.4 [Aug-26-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= HHVONE056
(1058 letters)
Database: nr
1,508,275 sequences; 485,782,529 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9629434|ref|NP_044655.1| UL52 [Human herpesvirus 1] >gnl|BL_O... 2149 0.0
gi|9629323|ref|NP_044523.1| UL52 [Human herpesvirus 2] >gnl|BL_O... 1755 0.0
gi|28804689|dbj|BAC58093.1| component of DNA helicase-primase co... 1487 0.0
gi|30984481|ref|NP_851913.1| component of helicase-primase compl... 1485 0.0
gi|9626744|ref|NP_041016.1| encodes for a protein associated wit... 739 0.0
gi|9629799|ref|NP_045224.1| 7 [Equine herpesvirus 4] >gnl|BL_ORD... 720 0.0
gi|12084881|ref|NP_073347.1| UL52 DNA helicase-primase associate... 717 0.0
gi|10834924|ref|NP_066885.1| UL52 protein [Gallid herpesvirus 3]... 705 0.0
gi|10180758|gb|AAG14246.1|AF243438_61 UL52 DNA helicase-primase-... 695 0.0
gi|3024795|sp|Q85228|UL52_PRVKA DNA HELICASE/PRIMASE COMPLEX PRO... 686 0.0
gi|993017|emb|CAA60691.1| UL52 [Pseudorabies virus] 685 0.0
gi|9629822|ref|NP_045306.1| component of DNA helicase/primase co... 676 0.0
gi|9635087|ref|NP_057815.1| UL52 [Gallid herpesvirus 2] >gnl|BL_... 653 0.0
gi|9625881|ref|NP_040129.1| DNA helicase-primase complex [Human ... 635 e-180
gi|13242454|ref|NP_077420.1| DNA helicase-primase complex compon... 618 e-175
gi|6065853|emb|CAB58356.1| helicase-primase complex [Gallid herp... 424 e-117
gi|11878253|gb|AAG40868.1|AF310619_1 UL52 [Pseudorabies virus Ea] 276 2e-72
gi|1857421|gb|AAB48438.1| DNA helicase-primase complex [Gallid h... 210 1e-52
gi|11527594|dbj|BAB18673.1| DNA helicase-primase complex protein... 198 5e-49
gi|136965|sp|P17149|UL70_HCMVA HELICASE/PRIMASE COMPLEX PROTEIN ... 194 6e-48
gi|28373251|ref|NP_783788.1| UL70 [Human herpesvirus 5] >gnl|BL_... 194 6e-48
gi|14251058|ref|NP_116420.1| T70 [Tupaia herpesvirus] >gnl|BL_OR... 182 2e-44
gi|20026661|ref|NP_612703.1| DNA helicase-primase complex protei... 178 5e-43
gi|9845352|ref|NP_064166.1| pR70 [Rat cytomegalovirus] >gnl|BL_O... 177 1e-42
gi|3024793|sp|Q69153|UL70_MCMVS HELICASE/PRIMASE COMPLEX PROTEIN... 160 1e-37
gi|9628059|ref|NP_042653.1| DNA helicase-primase complex compone... 146 2e-33
gi|31377976|gb|AAP50626.1| rh100 [Rhesus cytomegalovirus strain ... 146 2e-33
gi|1066180|emb|CAA62080.1| protein associated with a DNA helicas... 133 2e-29
gi|18653862|ref|NP_570796.1| DNA replication protein [Macaca mul... 124 7e-27
gi|9628345|ref|NP_042936.1| helicase /primase complex [Human her... 119 4e-25
gi|18025484|gb|AAK95428.1| BSLF1 [cercopithicine herpesvirus 15] 117 1e-24
gi|9633114|ref|NP_050224.1| helicase/primase complex [Human herp... 116 2e-24
gi|9625608|ref|NP_039859.1| DNA helicase-primase complex compone... 112 4e-23
gi|18846023|ref|NP_572109.1| ORF 56; DNA replication protein hom... 108 4e-22
gi|9628766|ref|NP_043797.1| primase [Human herpesvirus 7] >gnl|B... 98 7e-19
gi|136940|sp|Q00040|UL52_HSVE4 DNA HELICASE/PRIMASE COMPLEX PROT... 96 5e-18
gi|9629585|ref|NP_044893.1| DNA replication protein [murid herpe... 86 4e-15
gi|1066182|emb|CAA62081.1| protein associated with a DNA helicas... 86 5e-15
gi|10140978|ref|NP_065555.1| primase [Alcelaphine herpesvirus 1]... 85 8e-15
gi|9631247|ref|NP_048028.1| primase [Ateline herpesvirus 3] >gnl... 79 4e-13
gi|13095633|ref|NP_076548.1| DNA replication protein [Bovine her... 79 6e-13
gi|30348560|emb|CAC84352.1| primase [Saimiriine herpesvirus 2] 78 1e-12
gi|6689295|emb|CAB65429.1| hypothetical protein [Saimiriine herp... 78 1e-12
gi|9626011|ref|NP_040258.1| ORF 56~EDRF4~sim. to other HV [Saimi... 78 1e-12
gi|24943142|ref|NP_733904.1| ORF50 [Callitrichine herpesvirus 3]... 71 1e-10
>gi|9629434|ref|NP_044655.1| UL52 [Human herpesvirus 1]
gi|136939|sp|P10236|UL52_HSV11 DNA HELICASE/PRIMASE COMPLEX PROTEIN
(DNA REPLICATION PROTEIN UL52)
gi|73967|pir||WMBE52 UL52 protein - human herpesvirus 1 (strain 17)
gi|59552|emb|CAA32288.1| UL52 [Human herpesvirus 1]
gi|330238|gb|AAA45826.1| UL52 [human herpesvirus 1]
Length = 1058
Score = 2149 bits (5569), Expect = 0.0
Identities = 1058/1058 (100%), Positives = 1058/1058 (100%)
Query: 1 MGQEDGNRGERRAAGTPVEVTALYATDGCVITSSIALLTNSLLGAEPVYIFSYDAYTHDG 60
MGQEDGNRGERRAAGTPVEVTALYATDGCVITSSIALLTNSLLGAEPVYIFSYDAYTHDG
Sbjct: 1 MGQEDGNRGERRAAGTPVEVTALYATDGCVITSSIALLTNSLLGAEPVYIFSYDAYTHDG 60
Query: 61 RADGPTEQDRFEESRALYQASGGLNGDSFRVTFCLLGTEVGGTHQARGRTRPMFVCRFER 120
RADGPTEQDRFEESRALYQASGGLNGDSFRVTFCLLGTEVGGTHQARGRTRPMFVCRFER
Sbjct: 61 RADGPTEQDRFEESRALYQASGGLNGDSFRVTFCLLGTEVGGTHQARGRTRPMFVCRFER 120
Query: 121 ADDVAALQDALAHGTPLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAA 180
ADDVAALQDALAHGTPLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAA
Sbjct: 121 ADDVAALQDALAHGTPLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAA 180
Query: 181 QYDQGASLRSLVGRTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEK 240
QYDQGASLRSLVGRTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEK
Sbjct: 181 QYDQGASLRSLVGRTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEK 240
Query: 241 SLVLTTRYYLLQAQRLGGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRF 300
SLVLTTRYYLLQAQRLGGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRF
Sbjct: 241 SLVLTTRYYLLQAQRLGGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRF 300
Query: 301 CCTSQYARGAAAAGFPLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHF 360
CCTSQYARGAAAAGFPLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHF
Sbjct: 301 CCTSQYARGAAAAGFPLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHF 360
Query: 361 ECFSPPRLATHLRAVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTP 420
ECFSPPRLATHLRAVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTP
Sbjct: 361 ECFSPPRLATHLRAVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTP 420
Query: 421 RETVLDGDTAKAYLRARTYAPGALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGWPAFA 480
RETVLDGDTAKAYLRARTYAPGALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGWPAFA
Sbjct: 421 RETVLDGDTAKAYLRARTYAPGALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGWPAFA 480
Query: 481 PASPGEDTAGGTPPPQTCGIVKRLLRLAATEQQGPTPPAIAALIRNAAVQTPLPVYRISM 540
PASPGEDTAGGTPPPQTCGIVKRLLRLAATEQQGPTPPAIAALIRNAAVQTPLPVYRISM
Sbjct: 481 PASPGEDTAGGTPPPQTCGIVKRLLRLAATEQQGPTPPAIAALIRNAAVQTPLPVYRISM 540
Query: 541 VPTGQAFAALAWDDWARITRDARLAEAVVSAEAAAHPDHGALGRRLTDRIRAQGPVMPPG 600
VPTGQAFAALAWDDWARITRDARLAEAVVSAEAAAHPDHGALGRRLTDRIRAQGPVMPPG
Sbjct: 541 VPTGQAFAALAWDDWARITRDARLAEAVVSAEAAAHPDHGALGRRLTDRIRAQGPVMPPG 600
Query: 601 GLDAGGQMYVNRNEIFNGALAITNIILDLDIALKEPVPFRRLHEALGHFRRGALAAVQLL 660
GLDAGGQMYVNRNEIFNGALAITNIILDLDIALKEPVPFRRLHEALGHFRRGALAAVQLL
Sbjct: 601 GLDAGGQMYVNRNEIFNGALAITNIILDLDIALKEPVPFRRLHEALGHFRRGALAAVQLL 660
Query: 661 FPAARVDPDAYPCYFFKSACRPGPASVGSGSGLGNDDDGDWFPCYDDAGDEEWAEDPGAM 720
FPAARVDPDAYPCYFFKSACRPGPASVGSGSGLGNDDDGDWFPCYDDAGDEEWAEDPGAM
Sbjct: 661 FPAARVDPDAYPCYFFKSACRPGPASVGSGSGLGNDDDGDWFPCYDDAGDEEWAEDPGAM 720
Query: 721 DTSHDPPDDEVAYFDLCHEVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTM 780
DTSHDPPDDEVAYFDLCHEVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTM
Sbjct: 721 DTSHDPPDDEVAYFDLCHEVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTM 780
Query: 781 RGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRL 840
RGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRL
Sbjct: 781 RGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRL 840
Query: 841 LPVFVIPPACKDVPAFVAAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYVSFFERKAS 900
LPVFVIPPACKDVPAFVAAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYVSFFERKAS
Sbjct: 841 LPVFVIPPACKDVPAFVAAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYVSFFERKAS 900
Query: 901 RNALEHFGRRETLTEVLGRYNVQPDAGGTVEGFASELLGRIVACIETHFPEHAGEYQAVS 960
RNALEHFGRRETLTEVLGRYNVQPDAGGTVEGFASELLGRIVACIETHFPEHAGEYQAVS
Sbjct: 901 RNALEHFGRRETLTEVLGRYNVQPDAGGTVEGFASELLGRIVACIETHFPEHAGEYQAVS 960
Query: 961 VRRAVSKDDWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLC 1020
VRRAVSKDDWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLC
Sbjct: 961 VRRAVSKDDWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLC 1020
Query: 1021 QQCFAAKCDSNRLHTLFTIDAGTPCSPSVPCSTSQPSS 1058
QQCFAAKCDSNRLHTLFTIDAGTPCSPSVPCSTSQPSS
Sbjct: 1021 QQCFAAKCDSNRLHTLFTIDAGTPCSPSVPCSTSQPSS 1058
>gi|9629323|ref|NP_044523.1| UL52 [Human herpesvirus 2]
gi|1869876|emb|CAB06739.1| UL52 [Human herpesvirus 2]
Length = 1066
Score = 1755 bits (4545), Expect = 0.0
Identities = 879/1066 (82%), Positives = 932/1066 (86%), Gaps = 9/1066 (0%)
Query: 1 MGQEDGNRGERRAAGTPVEVTALYATDGCVITSSIALLTNSLLGAEPVYIFSYDAYTHD- 59
MG ED + E R+ PVEVTALYATDGCVITSS+ALLTN LLGAEP+YIFSYDAY D
Sbjct: 1 MGTEDCDH-EGRSVAAPVEVTALYATDGCVITSSLALLTNCLLGAEPLYIFSYDAYRSDA 59
Query: 60 --GRADGPTEQDRFEESRALYQASGGLNGDSFRVTFCLLGTEVGGTHQARGRTRPMFVCR 117
G PTEQ+RFE SRALY+ +GGLNGDSFRVTFCLLGTEVG TH +GRTRPMFVCR
Sbjct: 60 PNGPTGAPTEQERFEGSRALYRDAGGLNGDSFRVTFCLLGTEVGVTHHPKGRTRPMFVCR 119
Query: 118 FERADDVAALQDALAHGTPLQPDHIAATLDAEATFALHANMILALTVAI-NNASPRTGRD 176
FERADDVA LQDAL GTPL P H+ ATLD EATFALHAN+I+ALTVAI +NA R G
Sbjct: 120 FERADDVAVLQDALGRGTPLLPAHVTATLDLEATFALHANIIMALTVAIVHNAPARIGSG 179
Query: 177 AAAAQYDQGASLRSLVGRTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFG 236
+ A Y+ G S+RS+VGR SLGQRGLTTL+VHHE RVL AYRRAYYGSAQSPFWFLSKFG
Sbjct: 180 STAPLYEPGESMRSVVGRMSLGQRGLTTLFVHHEARVLGAYRRAYYGSAQSPFWFLSKFG 239
Query: 237 PDEKSLVLTTRYYLLQAQRLGGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAA 296
PDEKSLVL RYYLLQA RLGGAGATYDLQA+KDICATYAIPH PRPDT+SAASLTSFAA
Sbjct: 240 PDEKSLVLAARYYLLQAPRLGGAGATYDLQAVKDICATYAIPHDPRPDTLSAASLTSFAA 299
Query: 297 ITRFCCTSQYARGAAAAGFPLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIY 356
ITRFCCTSQY+RGAAAAGFPLYVERRIAADVRET ALEKFI HDRSCLRVSDREFITYIY
Sbjct: 300 ITRFCCTSQYSRGAAAAGFPLYVERRIAADVRETGALEKFIAHDRSCLRVSDREFITYIY 359
Query: 357 LAHFECFSPPRLATHLRAVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKH 416
LAHFECFSPPRLATHLRAVTTHDP+PAASTEQPSPLGREAVEQFF HVRAQLNI EYVK
Sbjct: 360 LAHFECFSPPRLATHLRAVTTHDPSPAASTEQPSPLGREAVEQFFRHVRAQLNIREYVKQ 419
Query: 417 NVTPRETVLDGDTAKAYLRARTYAPGALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGW 476
NVTPRET L GD A AYLRARTYAP ALTPAPAYCG DS+TKMMGRLA+AE+LLVP GW
Sbjct: 420 NVTPRETALAGDAAAAYLRARTYAPAALTPAPAYCGVADSSTKMMGRLAEAERLLVPHGW 479
Query: 477 PAFAPASPGEDTAGGTPPPQTCGIVKRLLRLAATEQQGPTPPAIAALIRNAAVQTPLPVY 536
PAFAP +PG+D GGT PQTCGIVKRLL+LAATEQQG TPPAIAAL+++A+VQTPLPVY
Sbjct: 480 PAFAPTTPGDDAGGGTAAPQTCGIVKRLLKLAATEQQGTTPPAIAALMQDASVQTPLPVY 539
Query: 537 RISMVPTGQAFAALAWDDWARITRDARLAEAVVSAEAAAHPDHGALGRRLTDRIRAQGPV 596
RI+M PTGQAFAA A DDWAR+TRDAR EA V A+AAA P+ GALGRRLT RI A+GP
Sbjct: 540 RITMSPTGQAFAAAARDDWARVTRDARPPEATVVADAAAAPEPGALGRRLTRRICARGPA 599
Query: 597 MPPGGLDAGGQMYVNRNEIFNGALAITNIILDLDIALKEPVPFRRLHEALGHFRRGALAA 656
+PPGGL GGQMYVNRNEIFN ALA+TNIILDLDIALKEPVPF RLHEALGHFRRGALAA
Sbjct: 600 LPPGGLAVGGQMYVNRNEIFNAALAVTNIILDLDIALKEPVPFPRLHEALGHFRRGALAA 659
Query: 657 VQLLFPAARVDPDAYPCYFFKSACRP--GPASVGSGSGLGNDD-DGDWFPCYDDAGDEEW 713
VQLLFPAARVDPDAYPCYFFKSACRP P G G G DD DGDWFP GDEEW
Sbjct: 660 VQLLFPAARVDPDAYPCYFFKSACRPRAPPVCAGDGPSAGGDDGDGDWFPDAGGPGDEEW 719
Query: 714 AEDPGAMDTSHDP-PDDEVAYFDLCHEVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPY 772
ED MDT+H P PDDE AY DL HE P A P E DS VCSC DKIGLRVC+PVPAPY
Sbjct: 720 EEDTDPMDTTHGPLPDDEAAYLDLLHEQIPAATPSEPDSVVCSCADKIGLRVCLPVPAPY 779
Query: 773 VVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAP 832
VVHGSLTMRGVARVIQQAVLLDRDFVEA+GS+VKNFLLIDTGVYAHGHSLRLPYFAKI P
Sbjct: 780 VVHGSLTMRGVARVIQQAVLLDRDFVEAVGSHVKNFLLIDTGVYAHGHSLRLPYFAKIGP 839
Query: 833 DGPACGRLLPVFVIPPACKDVPAFVAAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYV 892
DG ACGRLLPVFVIPPAC+DVPAFVAAHADPRRFHFHAPP + A+PREIRVLHSLGGDYV
Sbjct: 840 DGSACGRLLPVFVIPPACEDVPAFVAAHADPRRFHFHAPPMFSAAPREIRVLHSLGGDYV 899
Query: 893 SFFERKASRNALEHFGRRETLTEVLGRYNVQPDAGGTVEGFASELLGRIVACIETHFPEH 952
SFFE+KASRNALEHFGRRETLTEVLGRY+V+PDAG TVEGFASELLGRIVACIE HFPEH
Sbjct: 900 SFFEKKASRNALEHFGRRETLTEVLGRYDVRPDAGETVEGFASELLGRIVACIEAHFPEH 959
Query: 953 AGEYQAVSVRRAVSKDDWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGAN 1012
A EYQAVSVRRAV KDDWVLLQL+P RG L QSLSCLRFKHGRASRATARTF+ALSVG N
Sbjct: 960 AREYQAVSVRRAVIKDDWVLLQLIPGRGALNQSLSCLRFKHGRASRATARTFLALSVGTN 1019
Query: 1013 NRLCVSLCQQCFAAKCDSNRLHTLFTIDAGTPCSPSVPCSTSQPSS 1058
NRLC SLCQQCFA KCD+NRLHTLFT+DAGTPCS S P STS+PSS
Sbjct: 1020 NRLCASLCQQCFATKCDNNRLHTLFTVDAGTPCSRSAPSSTSRPSS 1065
>gi|28804689|dbj|BAC58093.1| component of DNA helicase-primase complex
[Cercopithecine herpesvirus 1]
Length = 1058
Score = 1487 bits (3850), Expect = 0.0
Identities = 766/1059 (72%), Positives = 850/1059 (79%), Gaps = 18/1059 (1%)
Query: 13 AAGTPVEVTALYATDGCVITSSIALLTNSLLGAEPVYIFSYDAYTHDGRADGPTEQDRFE 72
AA PVEVTAL+ATDGCVITSSIALLTN +GAEP+Y+FSYDAY D +E+ R+E
Sbjct: 4 AASPPVEVTALFATDGCVITSSIALLTNCAVGAEPLYVFSYDAYLPDDPTGPASEKARYE 63
Query: 73 ESRALYQASGGLNGDSFRVTFCLLGTEVGGT-HQARGRTR--PMFVCRFERADDVAALQD 129
S ALY+ASGGL+G++FRVTFCLLGTE GG H AR RTR PMFVCRFERADDVAALQ+
Sbjct: 64 RSLALYRASGGLSGEAFRVTFCLLGTEAGGVGHHARARTRVRPMFVCRFERADDVAALQE 123
Query: 130 ALAHGTPLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAAQYDQGASLR 189
AL G PL P H+A TLDAEATFA+H +ILALTVA+N AS RTGR AAAA+Y G SLR
Sbjct: 124 ALGRGAPLAPAHVARTLDAEATFAIHTPLILALTVAVNGASARTGRTAAAAEYAPGESLR 183
Query: 190 SLVGRTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYY 249
SLV R LGQRGLTTL+VHHE RVLAAYRRAYYGSAQ+PFWF++KFGPDEKSLVL RYY
Sbjct: 184 SLVARAPLGQRGLTTLFVHHEARVLAAYRRAYYGSAQNPFWFVTKFGPDEKSLVLVARYY 243
Query: 250 LLQAQRLGGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYARG 309
LLQA RLGGAGATYDLQAIKD+CATYA+PH R D SAA+LTSFAA+TRFCCTSQYARG
Sbjct: 244 LLQALRLGGAGATYDLQAIKDVCATYAVPHVSRADAPSAAALTSFAAVTRFCCTSQYARG 303
Query: 310 AAAAGFPLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLA 369
AAAGFPLYVERRIAADVRET AL++FI HDR CLRVSDREFITYIYLAHFECFSPPRLA
Sbjct: 304 PAAAGFPLYVERRIAADVRETGALKEFIAHDRGCLRVSDREFITYIYLAHFECFSPPRLA 363
Query: 370 THLRAVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDT 429
HLRAVTT DP+PAA+T++PS LGREAVE+FF HVRAQLNI EYV+ NVTPRE VL G T
Sbjct: 364 GHLRAVTTRDPDPAAATDRPSGLGREAVERFFSHVRAQLNIREYVRQNVTPREAVLRGAT 423
Query: 430 AKAYLRARTYAPGALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGWPAFAPASPGEDTA 489
A+AYLRARTYAP AL AP Y GAVDSAT M+GRLA+AE+LLVP GWP P P E
Sbjct: 424 AEAYLRARTYAPAALEAAPRYRGAVDSATGMLGRLAEAERLLVPHGWPG-GPPRPAEG-E 481
Query: 490 GGTPPPQTCGIVKRLLRLAATEQQGPTPPAIAALIRNAAVQTPLPVYRISMVPTGQAFAA 549
GG P CGIV+RLLRLAATE PPAIAAL ++A QTPLPVYR++M P GQAFAA
Sbjct: 482 GGAGAPAGCGIVRRLLRLAATEPGAEAPPAIAALTQDARTQTPLPVYRVAMAPRGQAFAA 541
Query: 550 LAWDDWARITRDARLAEAVVS-AEAAAHPDHGALGRRLTDRIRAQGPVMPPG-GLDAGGQ 607
LA DDW RI+RDARL+ A VS A AAA PD GALG RLT R+ A+ PV P G A GQ
Sbjct: 542 LARDDWDRISRDARLSAADVSAAAAAAAPDPGALGLRLTWRVHARNPVTAPSTGPTAAGQ 601
Query: 608 MYVNRNEIFNGALAITNIILDLDIALKEPVPFRRLHEALGHFRRGALAAVQLLFPAARVD 667
MYVNRNEIFNG LA+TNIILDLD+AL+EP+PF RLH ALGHFRRGALAAV LLFP ARVD
Sbjct: 602 MYVNRNEIFNGDLAVTNIILDLDVALREPIPFERLHVALGHFRRGALAAVALLFPGARVD 661
Query: 668 PDAYPCYFFKSACRPGPASVGSGSGLGND---DDGDWFPCYDDAGDEEWA--EDPGAMDT 722
PDAYPCYFFKSAC P +V GLG D + W P AG+ W +DP A
Sbjct: 662 PDAYPCYFFKSAC--SPRAVRGDPGLGPDGEYGEAPWAP-PGGAGENAWEDDDDPDAEAL 718
Query: 723 SHDPPDDEVAYFDLCHEVGPTAEP--RETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTM 780
+ D+E AY D HE P ++SP C+C KIGLRVC+PVPAPYVV GSLTM
Sbjct: 719 ARGGVDEEAAYLDALHETPTATAPAAATSESPRCTCAKKIGLRVCLPVPAPYVVSGSLTM 778
Query: 781 RGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRL 840
RGVARVIQQAVLLDR+FVEA+G YV++FLL+DTGVYAHGHSLRLPYFAK+ +G ACGRL
Sbjct: 779 RGVARVIQQAVLLDREFVEAVGGYVRDFLLVDTGVYAHGHSLRLPYFAKVTDEGLACGRL 838
Query: 841 LPVFVIPPACKDVPAFVAAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYVSFFERKAS 900
LPVFV+PPAC DVPAFVAAHADPRRFHFHAPP E+RVLHSLGGDY+SFFERKAS
Sbjct: 839 LPVFVVPPACPDVPAFVAAHADPRRFHFHAPPATAPDAGELRVLHSLGGDYISFFERKAS 898
Query: 901 RNALEHFGRRETLTEVLGRYNVQPDAGGTVEGFASELLGRIVACIETHFPEHAGEYQAVS 960
NA+EHFGRRETL EVLGRY+ + G TVE FA ELLGRI+AC+ETHFPEH EYQ+VS
Sbjct: 899 HNAIEHFGRRETLAEVLGRYDARLGVGDTVEAFALELLGRILACLETHFPEHVHEYQSVS 958
Query: 961 VRRAVSKDDWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLC 1020
V+RA+ +D+ LLQLVP RG Q LSCLRFKHGR SRATARTF+ALSVGA N LCVSLC
Sbjct: 959 VQRALVQDNRALLQLVPSRGGFQHGLSCLRFKHGRNSRATARTFLALSVGARNGLCVSLC 1018
Query: 1021 QQCFAAKCDSNRLHTLFTIDAG-TPCSPSVPCSTSQPSS 1058
QQCFA+KCDSNRL TLFT+DAG PCSP P TS PS+
Sbjct: 1019 QQCFASKCDSNRLRTLFTVDAGPPPCSPCAPSGTSPPSA 1057
>gi|30984481|ref|NP_851913.1| component of helicase-primase complex
[Cercopithecine herpesvirus 1]
gi|30844295|gb|AAP41471.1| component of helicase-primase complex
[Cercopithecine herpesvirus 1]
Length = 1058
Score = 1485 bits (3844), Expect = 0.0
Identities = 765/1059 (72%), Positives = 849/1059 (79%), Gaps = 18/1059 (1%)
Query: 13 AAGTPVEVTALYATDGCVITSSIALLTNSLLGAEPVYIFSYDAYTHDGRADGPTEQDRFE 72
AA PVEVTAL+ATDGCVITSSIALLTN +GAEP+Y+FSYDAY D +E+ R+E
Sbjct: 4 AASPPVEVTALFATDGCVITSSIALLTNCAVGAEPLYVFSYDAYLPDDPTGPASEKARYE 63
Query: 73 ESRALYQASGGLNGDSFRVTFCLLGTEVGGT-HQARGRTR--PMFVCRFERADDVAALQD 129
S ALY+ASGGL+G++FRVTFCLLGTE GG H AR RTR PMFVCRFERADDVAALQ+
Sbjct: 64 RSLALYRASGGLSGEAFRVTFCLLGTEAGGVGHHARARTRVRPMFVCRFERADDVAALQE 123
Query: 130 ALAHGTPLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAAQYDQGASLR 189
AL G PL P H+A TLDAEATFA+H +ILALTVA+N AS RTGR AAAA+Y G SLR
Sbjct: 124 ALGRGAPLAPAHVARTLDAEATFAIHTPLILALTVAVNGASARTGRTAAAAEYAPGESLR 183
Query: 190 SLVGRTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYY 249
SLV R LGQRGLTTL+VHHE RVLAAYRRAYYGSAQ+PFWF++KFGPDEKSLVL RYY
Sbjct: 184 SLVARAPLGQRGLTTLFVHHEARVLAAYRRAYYGSAQNPFWFVTKFGPDEKSLVLVARYY 243
Query: 250 LLQAQRLGGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYARG 309
LLQA RLGGAGATYDLQAIKD+CATYA+PH R D SAA+LTSFAA+TRFCCTSQYARG
Sbjct: 244 LLQALRLGGAGATYDLQAIKDVCATYAVPHVSRADAPSAAALTSFAAVTRFCCTSQYARG 303
Query: 310 AAAAGFPLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLA 369
AAAGFPLYVERRIAADVRET AL++FI HDR CLRVSDREFITYIYLAHFECFSPPRLA
Sbjct: 304 PAAAGFPLYVERRIAADVRETGALKEFIAHDRGCLRVSDREFITYIYLAHFECFSPPRLA 363
Query: 370 THLRAVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDT 429
HLRAVTT DP+PAA+T++PS LGREAVE+FF HVRAQLNI EYV+ NVTPRE VL G T
Sbjct: 364 GHLRAVTTRDPDPAAATDRPSGLGREAVERFFSHVRAQLNIREYVRQNVTPREAVLRGAT 423
Query: 430 AKAYLRARTYAPGALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGWPAFAPASPGEDTA 489
A+AYLRARTYAP AL AP Y GAVDSAT M+GRLA+AE+LLVP GWP P P E
Sbjct: 424 AEAYLRARTYAPAALEAAPRYRGAVDSATGMLGRLAEAERLLVPHGWPG-GPPRPAEG-E 481
Query: 490 GGTPPPQTCGIVKRLLRLAATEQQGPTPPAIAALIRNAAVQTPLPVYRISMVPTGQAFAA 549
GG P CGIV+RLLRLAATE PPAIAAL ++A QTPLPVYR++M P GQAFAA
Sbjct: 482 GGAGAPAGCGIVRRLLRLAATEPGAEAPPAIAALTQDARTQTPLPVYRVAMAPRGQAFAA 541
Query: 550 LAWDDWARITRDARLAEAVVS-AEAAAHPDHGALGRRLTDRIRAQGPVMPPG-GLDAGGQ 607
LA DDW RI+RDARL+ A VS A AAA PD GALG RLT R+ A+ PV P G A GQ
Sbjct: 542 LARDDWDRISRDARLSAADVSAAAAAAAPDPGALGLRLTWRVHARNPVTAPSTGPTAAGQ 601
Query: 608 MYVNRNEIFNGALAITNIILDLDIALKEPVPFRRLHEALGHFRRGALAAVQLLFPAARVD 667
MYVNRNEIFNG LA+TNIILDLD+AL+EP+PF RLH ALGHFRRGALAAV LLFP ARVD
Sbjct: 602 MYVNRNEIFNGDLAVTNIILDLDVALREPIPFERLHVALGHFRRGALAAVALLFPGARVD 661
Query: 668 PDAYPCYFFKSACRPGPASVGSGSGLGND---DDGDWFPCYDDAGDEEWA--EDPGAMDT 722
PDAYPCYFFKSAC P +V GLG D + W P AG+ W +DP A
Sbjct: 662 PDAYPCYFFKSAC--SPRAVRGDPGLGPDGEYGEAPWAP-PGGAGENAWEDDDDPDAEAL 718
Query: 723 SHDPPDDEVAYFDLCHEVGPTAEP--RETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTM 780
+ D+E AY D HE P ++SP C+C KIGLRVC+PVPAPYVV GSLTM
Sbjct: 719 ARGGVDEEAAYLDALHETPTATAPAAATSESPRCTCAKKIGLRVCLPVPAPYVVSGSLTM 778
Query: 781 RGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRL 840
RGVARVIQQAVLLDR+FVEA+G YV++FLL+DTGVYAHGHSLRLPYFAK+ +G ACGRL
Sbjct: 779 RGVARVIQQAVLLDREFVEAVGGYVRDFLLVDTGVYAHGHSLRLPYFAKVTDEGLACGRL 838
Query: 841 LPVFVIPPACKDVPAFVAAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYVSFFERKAS 900
LPVFV+PPAC DVPAFVAAHADPRRFHFHAPP E+RVLHSLGGDY+SFFERKA
Sbjct: 839 LPVFVVPPACPDVPAFVAAHADPRRFHFHAPPATAPDAGELRVLHSLGGDYISFFERKAF 898
Query: 901 RNALEHFGRRETLTEVLGRYNVQPDAGGTVEGFASELLGRIVACIETHFPEHAGEYQAVS 960
NA+EHFGRRETL EVLGRY+ + G TVE FA ELLGRI+AC+ETHFPEH EYQ+VS
Sbjct: 899 HNAIEHFGRRETLAEVLGRYDARLGVGDTVEAFALELLGRILACLETHFPEHVHEYQSVS 958
Query: 961 VRRAVSKDDWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLC 1020
V+RA+ +D+ LLQLVP RG Q LSCLRFKHGR SRATARTF+ALSVGA N LCVSLC
Sbjct: 959 VQRALVQDNRALLQLVPSRGGFQHGLSCLRFKHGRNSRATARTFLALSVGARNGLCVSLC 1018
Query: 1021 QQCFAAKCDSNRLHTLFTIDAG-TPCSPSVPCSTSQPSS 1058
QQCFA+KCDSNRL TLFT+DAG PCSP P TS PS+
Sbjct: 1019 QQCFASKCDSNRLRTLFTVDAGPPPCSPCAPSGTSPPSA 1057
>gi|9626744|ref|NP_041016.1| encodes for a protein associated with a
DNA helicase/primase complex; ORF 7 [Equine herpesvirus
1]
gi|136941|sp|P28962|UL52_HSVEB DNA HELICASE/PRIMASE COMPLEX PROTEIN
(DNA REPLICATION PROTEIN UL52)
gi|73968|pir||WZBEA6 119K DNA helicase/primase-associated protein -
equine herpesvirus 1 (strain Ab4p)
gi|330799|gb|AAB02442.1| encodes for a protein associated with a DNA
helicase/primase complex; ORF 7
Length = 1081
Score = 739 bits (1907), Expect = 0.0
Identities = 438/1077 (40%), Positives = 587/1077 (53%), Gaps = 66/1077 (6%)
Query: 20 VTALYATDGCVITSSIALLTNSLLGAEPVYIFSYD-------AYTHDGRADGPTEQDRFE 72
+ LYATD CVIT S+ LLT +E VY SYD + RA D +
Sbjct: 10 IRVLYATDSCVITYSLMLLTGQE-SSEGVYAISYDWSSELDDLFGRQPRAPNTDAGDGWS 68
Query: 73 --ESRALYQASGGLNGDSFRVTFCLLGTEVGG-THQARGRTRPMFVCRFERADDVAALQD 129
E Q + L V+FCLL VGG + + + R RPMFVC F AL
Sbjct: 69 STEQSDADQLATALLQRKPSVSFCLLSGMVGGASDEPQDRVRPMFVCVFSTWTGARALAM 128
Query: 130 ALAHGTPLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAAQYD-QGASL 188
L+HG PL + + L EATF LH ++ILAL + N + R+GR AAAA+YD Q S+
Sbjct: 129 TLSHGHPLSSNTLLQALTEEATFLLHNDLILALAITTENVTARSGRTAAAAKYDPQRGSV 188
Query: 189 RSLVGRTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRY 248
++ V S G+ GLT++Y+HHE +VL A+RR Y + +PFWF SKFGP E+ +VL TRY
Sbjct: 189 KAAVIGHSTGRSGLTSVYIHHENKVLTAFRRLYCNNNTTPFWFASKFGPGEREIVLATRY 248
Query: 249 YLLQAQRLGGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYAR 308
YL QA R +G TYDLQA+KD TY +P AP P + LTSF+ +++FCC S Y+R
Sbjct: 249 YLFQAIRCSRSGGTYDLQAVKDFIRTYNVPAAPNPTGLDLTHLTSFSLLSKFCCQSWYSR 308
Query: 309 GAAAAGFPLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRL 368
G A P YV+ RI ADV E SALE FI DR LRVSDREFITYIYLAHFE F+ +L
Sbjct: 309 GPCALALPRYVDLRIQADVAEVSALEGFIAADRQGLRVSDREFITYIYLAHFESFNRKQL 368
Query: 369 ATHLRAVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGD 428
HL AV+ DP S L R +E+FF VR QLNI +Y+ HNV PR L
Sbjct: 369 YDHLLAVSIADPGDIDRITSTSSLKRGTIEKFFAQVRIQLNIRDYIAHNVNPRVVCLPAS 428
Query: 429 TAKAYLRARTYAPGALT--PAPAYCGAVDSATKMMGRLADAEKLLVPRGWPAFAPASPGE 486
Y + +TY P + T A G D++T ++ L E L RGW +
Sbjct: 429 IGSQYAQDKTYTPSSTTMSTGSAPLGVCDTSTPILKLLDRVESSLAGRGWIQTIVSPNKP 488
Query: 487 DTAGGTPP-------------PQTCGIVKRLLRLAATEQQGPTPPAIAALIRNAAVQTPL 533
+ TPP CGI +RLL +A++ + L V P
Sbjct: 489 QSVHSTPPLDQSRGDELSPGVSSQCGISRRLLHIASSPPVNGRALPLEVLFGQKGVPGPA 548
Query: 534 PVYRISMVPTGQAFAALAWDDWARITRD-------ARLAEAVVSAEAAAHPDHGALGRRL 586
PVYR+++ QAFA +A D W T++ + E + D +L R
Sbjct: 549 PVYRVALPSKRQAFAVIANDRWETTTQNLARPGGSKQAYEGGFALAGFGEIDDCSLAWRD 608
Query: 587 TDRIRAQGPVMPP--GGLDAGGQMYVNRNEIFNGALAITNIILDLDIALKEPVPFRRLHE 644
R V +A QMY+NRNEIFN +LA++NIILD+D +K VP LH
Sbjct: 609 LQLTRTTSGVCRTALASSNASAQMYINRNEIFNSSLAVSNIILDVDFGIKRRVPLGMLHL 668
Query: 645 ALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKSACRPGPASVGSGSGLGNDDDGDWFPC 704
A+ FR G + + L+F A V D+YPCYF+K++C P + G FP
Sbjct: 669 AMRGFRAGIITTLSLIFSDATVQWDSYPCYFYKTSC---PPQLVRALHRGEPSS---FPD 722
Query: 705 YDDAGDE-----EWAEDPGAMDTSHDPPDDEVAYFDLCHEV--------------GPTAE 745
Y D +E ++ +D AM+ D P D+ + +E G T
Sbjct: 723 YVDGVEECYMESDFIDDYAAMEEYTDGPMDDYEMMMVDNECPQAACDNTPPNKEGGKTPL 782
Query: 746 PRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYV 805
R D+ C CT+K+G RV +PVP PY++ G +RG+AR+IQQAV+L+R F E++ S +
Sbjct: 783 QRLDDTDACECTEKMGFRVTVPVPPPYLLAGPEALRGLARIIQQAVVLERTFTESMCSVL 842
Query: 806 KNFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRLLPVFVIPPACKDVPAFVAAHADPRR 865
++F IDTGVY+HG SLRLP+F K+ G G L P +VIPP C DV FVA H++P
Sbjct: 843 RDFSFIDTGVYSHGRSLRLPFFCKVGDSGEVYGGLYPFYVIPPKCNDVDEFVAQHSNPAN 902
Query: 866 FHFHAPPTYLASPREIRVLHSLGGDYVSFFERKASRNALEHFGRRETLTEVLGRYNVQPD 925
FHFHA P + P V+ LGGDYVSFFERK +RN +R TL +L NV
Sbjct: 903 FHFHAAPRH---PTITHVITDLGGDYVSFFERKVARNREAIMTKRATLESLLSSANVSIK 959
Query: 926 AGGTVEGFASE-LLGRIVACIETHFPEHAGEYQAVSVRRAVSKDDWVLLQLVPVRGTLQ- 983
+ VE F + +LG +V+ + THFP+ +GEYQ V V V+K DW+L+Q+ +
Sbjct: 960 SHEAVEAFVVDVVLGEVVSHLATHFPDQSGEYQTVGVHTVVTKPDWILMQINRSGNAYRS 1019
Query: 984 QSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHTLFTID 1040
Q SCLR KH R++R ARTF+++S + RLC S+ QQCFA KC +N++ T+FT++
Sbjct: 1020 QGFSCLRAKHLRSARGLARTFLSISADVHGRLCASISQQCFATKCGNNKMCTIFTLE 1076
>gi|9629799|ref|NP_045224.1| 7 [Equine herpesvirus 4]
gi|11278271|pir||T42550 gene 7 protein - equine herpesvirus 4 (strain
NS80567)
gi|2606017|gb|AAC59589.1| 7 [Equine herpesvirus 4]
Length = 1080
Score = 720 bits (1859), Expect = 0.0
Identities = 434/1076 (40%), Positives = 595/1076 (54%), Gaps = 65/1076 (6%)
Query: 20 VTALYATDGCVITSSIALLTNSLLGAEPVYIFSYD-------AYTHDGR---ADGPTEQD 69
+ LYATD CVIT S+ LLT +E Y+ SYD + R AD D
Sbjct: 10 IRVLYATDSCVITYSLMLLTGQE-SSEDAYVISYDWSSELDDLFGSQPRVLDADVGDSWD 68
Query: 70 RFEESRALYQASGGLNGDSFRVTFCLLGTEVGG-THQARGRTRPMFVCRFERADDVAALQ 128
++S A+ L V+FCLL VGG + + + R RPMFVC F AL
Sbjct: 69 TTDQSDEELLAAALLERKP-SVSFCLLSGIVGGASDEPQERIRPMFVCAFLTLTGARALT 127
Query: 129 DALAHGTPLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAAQYD-QGAS 187
L HG P+ + L TF LH ++ILAL + ++NA+ RTGR AAAA+YD Q S
Sbjct: 128 KTLLHGHPISSKILLQALVDGDTFQLHNDLILALAITLDNATARTGRTAAAAKYDPQRGS 187
Query: 188 LRSLVGRTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTR 247
+++ + S G+ GLT++Y+HHE +VL A+RR Y + +PFWF SKFGP E+ LVL TR
Sbjct: 188 VKAAILGHSTGRPGLTSVYIHHENKVLTAFRRLYSNNNTTPFWFTSKFGPGERELVLATR 247
Query: 248 YYLLQAQRLGGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYA 307
YYL QA R G G TYDLQA KD TY +P P P + LTSFA +++FCC S YA
Sbjct: 248 YYLFQAIRHSGCGGTYDLQATKDFIKTYNVPCLPNPTNLDLTHLTSFARLSQFCCQSWYA 307
Query: 308 RGAAAAGFPLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPR 367
RG +A P YV+ RI ADV E SALE+FI DR LRVSDREFITYIYLAHFE F+ +
Sbjct: 308 RGPSALALPRYVDLRIQADVSEVSALEEFIAADRQGLRVSDREFITYIYLAHFESFNRRQ 367
Query: 368 LATHLRAVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDG 427
L HL AV+ DP S L R +E+FF VR QLNI +Y+ HNV+P L
Sbjct: 368 LYNHLLAVSISDPADIERITSTSSLKRGTIEKFFAQVRIQLNIIDYIAHNVSPEVVRLPV 427
Query: 428 DTAKAYLRARTYAPGA--LTPAPAYCGAVDSATKMMGRLADAEKLLVPRGWPAFAPASPG 485
+K Y+ +TY P + + D++T+M+ L E L GW S
Sbjct: 428 SISKQYVSDKTYTPSSTMMFAGNNPLSICDTSTQMLKLLDRVETSLAGHGWIQTLIPSTK 487
Query: 486 EDTAGGTPP-------------PQTCGIVKRLLRLAATEQQGPTPPAIAALIRNAAVQTP 532
TPP P CGI +RLL +A+++ + L + P
Sbjct: 488 PQCITTTPPLDQPRGEELSPGVPSQCGISRRLLNIASSQPIDGRVLPLEVLFGQRGISGP 547
Query: 533 LPVYRISMVPTGQAFAALAWDDWARITRDA-----RLA-EAVVSAEAAAHPDHGALGRRL 586
PVYR+++ QAFA +A D W +T++ RLA E +S + + D A+ R
Sbjct: 548 TPVYRVALPSKRQAFAVIANDRWETVTQNMYHQTYRLASEHDLSFDGLSQMDDYAMAHRD 607
Query: 587 TDRIRAQGPV--MPPGGLDAGGQMYVNRNEIFNGALAITNIILDLDIALKEPVPFRRLHE 644
+R V +A QMY+NRNEIFN +LA++NIILD+D +K+P+P LH
Sbjct: 608 LQLMRDDTGVCRAAMASSNASLQMYINRNEIFNSSLAVSNIILDVDFDIKKPIPLGMLHL 667
Query: 645 ALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKSACRP---GPASVGSGSGLGNDDDGDW 701
A+ FR G + + L+F A V D+YPCYF+K+ C P + S L N +
Sbjct: 668 AMRGFRNGIITTLSLIFTEAVVQWDSYPCYFYKTQCPPQLFKARTKNEHSSLSN-----Y 722
Query: 702 FPCYDD-AGDEEWAEDPGAMDT-SHDPPDDEVAYFD--LCHEVGPTAEPRE--------- 748
C ++ + + +D AM+ ++D DD D C + +P+
Sbjct: 723 VDCVEEYYMESNFLDDYAAMEEYTYDLTDDYEMIVDDNECAQAVCDFKPQNKTTDKTPLQ 782
Query: 749 --TDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYVK 806
++ C CT+K+G R+ +PVP PY++ G +RGVAR+IQQAV+L+R F E++ S ++
Sbjct: 783 LLLETNACQCTEKMGFRITVPVPPPYILAGPEALRGVARIIQQAVVLERTFTESMCSVLR 842
Query: 807 NFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRLLPVFVIPPACKDVPAFVAAHADPRRF 866
+F +DTGVY+HG SLRLP+F K+ G G L P +V+P C +V F+A H++P F
Sbjct: 843 DFSFLDTGVYSHGRSLRLPFFCKVGDSGEVYGGLYPFYVVPKNCNNVNEFIAEHSNPANF 902
Query: 867 HFHAPPTYLASPREIRVLHSLGGDYVSFFERKASRNALEHFGRRETLTEVLGRYNVQPDA 926
HFHA P S V+ +LGGDYVSFFERK +RN +R TL +L YNV +
Sbjct: 903 HFHASP---RSSTVTHVITNLGGDYVSFFERKVARNREAIMTKRATLEFLLSSYNVSIKS 959
Query: 927 GGTVEGFASE-LLGRIVACIETHFPEHAGEYQAVSVRRAVSKDDWVLLQLVPVRGTLQ-Q 984
VE F + +L +V + HFP HAGEY V V V+K DW+LLQ+ + Q
Sbjct: 960 NEAVEAFVVDVVLCEVVLHLSAHFPNHAGEYHTVGVHTVVTKPDWILLQINRSGSAYRSQ 1019
Query: 985 SLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHTLFTID 1040
SCLR KH R++R ARTF+++S A+ RLC S+ QQCFA KC +N++ T+FT++
Sbjct: 1020 GFSCLRAKHLRSARGLARTFLSISADAHGRLCASISQQCFATKCGNNKMCTIFTLE 1075
>gi|12084881|ref|NP_073347.1| UL52 DNA helicase-primase associated
protein [Meleagrid herpesvirus 1]
gi|11095886|gb|AAG30093.1|AF282130_56 UL52 DNA helicase/primase
complex protein [Meleagrid herpesvirus 1]
gi|12025164|gb|AAG45790.1|AF291866_57 UL52 DNA helicase-primase
associated protein [Meleagrid herpesvirus 1]
Length = 1078
Score = 717 bits (1850), Expect = 0.0
Identities = 425/1077 (39%), Positives = 608/1077 (55%), Gaps = 74/1077 (6%)
Query: 20 VTALYATDGCVITSSIALLTNSLLGAEPVYIFSYDAYTHDGRADGPT---EQDRFEESRA 76
+ L+A DGC ++ ++ LLT + VYI +Y + D T E + E R+
Sbjct: 20 IKVLFAVDGCAVSFTLGLLTGQISSTNMVYIIAY--WDPDDVLSQNTFLAEVENNSEPRS 77
Query: 77 LYQASGGLNGDSFRVTFCLLG--TEVGGTHQARGRTRPMFVCRFERADDVAALQDALAHG 134
+ N +S R+ FCLL T G + RTRP+F+CRF+ ++ A+ ++ HG
Sbjct: 78 TGSLTLQANTESLRIEFCLLNQMTSCMGGADMKLRTRPIFICRFKSKSEIGAILSSITHG 137
Query: 135 TPLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAAQYDQGA-SLRSLVG 193
P+Q D +A+T+ E TF LH + LAL ++++N + R+GR+ A ++ SL
Sbjct: 138 LPIQADLLASTVCEEDTFMLHDDFNLALHISLSNLA-RSGRNHKHANKIMSKDTVLSLSQ 196
Query: 194 RTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQA 253
G+RGLT LY+ HE +V AAYRR Y GS + FW++SKFGPDEKSLVL RYYLLQA
Sbjct: 197 SFRGGKRGLTALYLQHEQKVTAAYRRIYGGSTTTAFWYVSKFGPDEKSLVLALRYYLLQA 256
Query: 254 QR-LGGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYARGAAA 312
Q + GA YDLQAIKD+C TY IP P P S A LTSFA ++RFCC+S YARGA A
Sbjct: 257 QDDISGAATDYDLQAIKDVCRTYDIPTKPNPTHFSTADLTSFARLSRFCCSSDYARGAIA 316
Query: 313 AGFPLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATHL 372
FP YVE RI ADV E AL ++I DR L++SD EF+ YIYLA+FEC++ +L HL
Sbjct: 317 RAFPTYVEHRIIADVSEVDALREYIERDRPSLKISDLEFVRYIYLAYFECYNRKQLKRHL 376
Query: 373 RAVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTAKA 432
VT +P S Q S LGR AVE FF HVR++L++ +++ NV+P + L + A
Sbjct: 377 EDVTVK--SPYESIYQKSSLGRRAVENFFTHVRSRLSVHDHITKNVSPEQVELGEELGMA 434
Query: 433 YLRARTYAPGALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGWPAF------------- 479
++ ARTY+P +T + G + AT + RL E L GWP
Sbjct: 435 FIDARTYSPCTMTMNSCFMGLCECATLITKRLDRLETKLQKHGWPCSRFDGTNVLSDNSN 494
Query: 480 APASPGEDTAG-----GTPPPQTCG---IVKRLLRLAATEQ-QGPTPPAIAALIRNAAVQ 530
P S +D G P T G IVKRLL + +++ G P + N +
Sbjct: 495 VPHSSFDDRTGICDSFQEPALATRGGPMIVKRLLAMVSSDGWSGNVGPISMLMGLNVSES 554
Query: 531 TPLPVYRISMVPTGQAFAALAWDDWARITRD-ARLAEAVVSAEAAAHPDHGALGR----- 584
PLPVYR+SM QAF LA + W R+ + + + A P L R
Sbjct: 555 GPLPVYRVSMAKGKQAFVTLAAECWERVIPPIGTIRDRLSRLNIAGMPTDDLLSRDRFMN 614
Query: 585 ----RLTDRIRAQGPVMPPGGLDAGGQMYVNRNEIFNGALAITNIILDLDIALKEPVPFR 640
R+ + + P + G A Q Y+NRNE+FN L + NI+LD+D+ LK+ +P
Sbjct: 615 VEMERILGLVGTEMPYIACG--PAEEQRYINRNEVFNENLVVCNIVLDVDVHLKQAIPSS 672
Query: 641 RLHEALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKSACRPGPA-SVGSGSGLGNDDDG 699
RLH AL FR G L A+ LL P A +D +YPCYF+KS+C+ + + L ++
Sbjct: 673 RLHAALRGFRSGTLRALSLLLPKANLDLRSYPCYFYKSSCKKSQSVRFARWTHLTSEYTY 732
Query: 700 DWFPCYDDAGDEEWAEDPGAMDTSHDPPDDEVAYFDLCHEVGPTAEPRETDSPV------ 753
D Y+ + + W D D S D P L ++ +A +DS +
Sbjct: 733 D----YEGSCTQTWDFDT---DISIDDPL-------LIDQMDESASRWTSDSALSAASDA 778
Query: 754 ---CSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYVKNFLL 810
C C DKIG+RVC+PVP PY++ GS T+ G++R+IQQAVL++RDFVE IG Y+KN+ +
Sbjct: 779 DIPCGCQDKIGMRVCIPVPPPYLLIGSATLGGISRIIQQAVLMERDFVETIGPYLKNYDI 838
Query: 811 IDTGVYAHGHSLRLPYFAKIAPDGPACGRLLPVFVIPPACKDVPAFVAAHADPRRFHFHA 870
ID GVY HG SLRLP+F+KI DG GRL+P++V+P C++ FV +H DPR FHFH+
Sbjct: 839 IDVGVYGHGRSLRLPFFSKIGDDGLVSGRLMPIYVLPDICENPDTFVLSHFDPRTFHFHS 898
Query: 871 PPTYLASPREIRVLHSLGGDYVSFFERKASRNALEHFGRRETLTEVLGRYNVQPDAGGTV 930
P + V+ +LGG+Y FFE+K + N FG + +L+ L + ++ ++
Sbjct: 899 P--RMTRLPVSTVIKNLGGEYAIFFEKKLTVNRDAFFGVKRSLSATLRERGIDVNSEDSI 956
Query: 931 EGFASE-LLGRIVACIETHFPEHAGEYQAVSVRRAVSKDDWVLLQLVP-VRGTLQQSLSC 988
F ++ +L I + H PE A EY+ + + V + D +L+ L+P + + +C
Sbjct: 957 IAFVTDFILEDISRYMNEHMPECAVEYRNMGISGCVVRTDRILIHLIPNTTASRGRGFTC 1016
Query: 989 LRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHTLFTIDAGTPC 1045
+R+KH R+SR +AR+++AL+V A+ RLCV + QQCFA KC +N+L TLFT+D + C
Sbjct: 1017 MRYKHTRSSRTSARSYLALNVDAHGRLCVCVIQQCFATKCGNNKLRTLFTVDVDSKC 1073
>gi|10834924|ref|NP_066885.1| UL52 protein [Gallid herpesvirus 3]
gi|4115414|dbj|BAA36349.1| UL52 protein [Gallid herpesvirus 1]
gi|5689325|dbj|BAA82949.1| UL52 product homolog [Marek's disease
virus serotype 2 MDV2]
gi|10800018|dbj|BAB16563.1| UL52 protein [Gallid herpesvirus 3]
Length = 1071
Score = 705 bits (1819), Expect = 0.0
Identities = 437/1086 (40%), Positives = 604/1086 (55%), Gaps = 91/1086 (8%)
Query: 20 VTALYATDGCVITSSIALLTNSLLGAEPVYIFSY--------DAYTHDGRADGPTEQDRF 71
+ L+A DGC ++ S+ALLT + PVY+ S+ D H RAD DR
Sbjct: 12 IKVLFAVDGCAVSFSLALLTGQVPSINPVYVISHWDPGNRLLDVLCH--RAD-----DR- 63
Query: 72 EESRALYQASGGLNG--DSFRVTFCLLGTEVGGTHQA--RGRTRPMFVCRFERADDVAAL 127
+ + G LN D +V FCLL G A + RTR +FVCRF ++ ++
Sbjct: 64 -DCGRIPNERGDLNAVSDPLKVEFCLLSQMTRGLGGADLKLRTRAIFVCRFTSHSEINSI 122
Query: 128 QDALAHGTPLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAAQYDQGAS 187
++A G P+Q D + ATL TF LH + +AL +++ S + A+
Sbjct: 123 VASIASGAPIQTDLLIATLSEYDTFRLHDDFNIALHISLACLSQKRRNGKEPAKSPDRNL 182
Query: 188 LRSLVGRTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTR 247
L + G S G+RGL LY+ +E +V AAYRR Y GS + FW++SKFGP+EKSLVL R
Sbjct: 183 LSIMAGTFSGGRRGLAGLYLQYEQKVTAAYRRVYGGSTTTAFWYVSKFGPEEKSLVLALR 242
Query: 248 YYLLQAQ-RLGGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQY 306
YYLLQAQ G YDLQAIKDIC TYA+P P S A LTSFA ++RFCC S Y
Sbjct: 243 YYLLQAQAEPTGIATGYDLQAIKDICDTYAVPVEANPTGFSTADLTSFARLSRFCCVSNY 302
Query: 307 ARGAAAAGFPLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPP 366
A G A FPLYVE RIAADV E AL+++I DRS L++SD EF+ YIYLA+FEC++
Sbjct: 303 ANGPVARAFPLYVEHRIAADVTEVDALKEYIERDRSGLKISDLEFVKYIYLAYFECYNRA 362
Query: 367 RLATHLRAVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLD 426
+L HLR VT P + S LG+ AV+ FF HVR++LN+ +++ NV+P + +
Sbjct: 363 QLRRHLRDVTVRCPEE--DVYKRSSLGKHAVDNFFTHVRSRLNVNDHIACNVSPDQVEMG 420
Query: 427 GDTAKAYLRARTYAPGALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGWP--------- 477
+A+ RARTY P + + G + ++ ++ RL E L GWP
Sbjct: 421 NVLTRAFCRARTYPPSTMESDARFTGICEPSSVIIKRLDALESTLHKYGWPRARSETVNM 480
Query: 478 ----AFAPASPGEDTAG--GTP---PPQTCG----IVKRLLRLAATEQQ----GPTPPAI 520
A P + D+ G P P C IVKRLL L + + + GPT
Sbjct: 481 MSECANLPIASSADSLRPPGLPLEHPGTHCRGGPMIVKRLLALVSADARVGDIGPTNMLT 540
Query: 521 AALIRNAAVQTPLPVYRISMVPTGQAFAALAWDDWARITRDARLAEAVVS--AEAAAHPD 578
IR +AV+ PLP+YRI M QAFA + D W +I + +A +S + P+
Sbjct: 541 G--IRESAVKGPLPIYRIGMSKGKQAFAVMVADCWDKIIPSPGIVKAHLSKLGRSGRAPE 598
Query: 579 HGALGRRL-----TDRIRAQGPVMPPGGLD-AGGQMYVNRNEIFNGALAITNIILDLDIA 632
+ R + +R+ +P A Q Y+NRNE+FN L + NIILD+D+
Sbjct: 599 DDVIARDIFFTSELERVTGHAAELPYFTCGPAEEQQYINRNEVFNDNLIVGNIILDVDVH 658
Query: 633 LKEPVPFRRLHEALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKSACRPGPAS-----V 687
L+ PVP + LH A+ FR GAL A+ LL P A++D +YPCYF+K++C+ +
Sbjct: 659 LRTPVPVKLLHVAMRGFRTGALKALSLLLPKAKIDHGSYPCYFYKTSCKKSRVVHVKHWM 718
Query: 688 GSGSGLGNDDDGDWFPCYDDAGDE--EWAEDPGAMDTSHDPPDDEVAYFDLCHEVGPTAE 745
S + D DG P + A E +DP MD DD ++ E ++
Sbjct: 719 SSTTDFALDCDG---PAVESADCELEMGFDDPLLMDQI----DDSISRC----ESDASSL 767
Query: 746 PRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYV 805
P + D P C+C +KIGLRVC+PVP PY++ GS TM G+ARV+QQ+VLL+R FVE IGSY+
Sbjct: 768 PSDADLP-CNCHEKIGLRVCIPVPPPYLLVGSRTMSGLARVLQQSVLLERSFVEPIGSYL 826
Query: 806 KNFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRLLPVFVIPPACKDVPAFVAAHADPRR 865
KN+ ++D+GVY HG SLRLP+F KI G GRLLP VIP C D FV +H P+
Sbjct: 827 KNYDIVDSGVYGHGRSLRLPFFGKIDETGLISGRLLPFCVIPERCGDAEQFVLSHLQPKT 886
Query: 866 FHFHAPPTYLASPREIR---VLHSLGGDYVSFFERKASRNALEHFGRRETLTEVLGRYNV 922
FHFH+P P E VL LGG+Y FFE+K + N FG R +L L V
Sbjct: 887 FHFHSP-----MPEEDHASVVLKGLGGEYAGFFEKKITINRDTFFGIRLSLAVALKARGV 941
Query: 923 QPDAGGTVEGFASE-LLGRIVACIETHFPEHAGEYQAVSVRRAVSKDDWVLLQLVPVRGT 981
+ + F +E +L I+ + H P+HA EY VSV V + DW+LLQL+ T
Sbjct: 942 DINDSAAIVSFVTEHILDDIIQYMHDHIPDHAAEYNHVSVSCCVIRPDWILLQLM-ANKT 1000
Query: 982 LQQS--LSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHTLFTI 1039
L ++ +C+RFKH R +R ++R++++L++ A+ RLC + QQCFAAKC +N+L TLFT+
Sbjct: 1001 LGRAHGFTCVRFKHTRTTRMSSRSYLSLNIDAHGRLCACVIQQCFAAKCGNNKLRTLFTV 1060
Query: 1040 DAGTPC 1045
D + C
Sbjct: 1061 DVDSKC 1066
>gi|10180758|gb|AAG14246.1|AF243438_61 UL52 DNA helicase-primase-like
protein associated protein [Gallid herpesvirus 2]
Length = 1074
Score = 695 bits (1794), Expect = 0.0
Identities = 419/1070 (39%), Positives = 591/1070 (55%), Gaps = 62/1070 (5%)
Query: 20 VTALYATDGCVITSSIALLTNSLLGAEPVYIFSY----DAYTHDGRADG-PTEQDRFEES 74
+ L+A DGC ++ S+ALLT + VY+ Y D ++ DG P +R +
Sbjct: 18 IKVLFAVDGCAVSFSLALLTGQIPSTNSVYVIGYWDPSDRFSSIPFLDGDPNTNERISTT 77
Query: 75 RALYQASGGLNGDSFRVTFCLLGTEVGGTHQA--RGRTRPMFVCRFERADDVAALQDALA 132
+ RV FCLL G A + RTR +FVCRF ++ A+ +++
Sbjct: 78 VCNLEDVPS----PLRVEFCLLNQMASGMGGADLKLRTRAIFVCRFTSWSEMNAIANSII 133
Query: 133 HGTPLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAAQYDQGASLRSLV 192
+GTP+Q + AT+ TF LH LAL V +N S + + S+
Sbjct: 134 YGTPIQAGVLQATISETETFMLHDEFNLALHVFLNGLSLKGRNKKDVCMSLNHNYISSVS 193
Query: 193 GRTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQ 252
G+RGLT LY+ HE +V AAYRR Y GS + FW++SKFGPDEKSLVL RYYLLQ
Sbjct: 194 ENFPRGKRGLTGLYLQHEQKVTAAYRRIYGGSTTTAFWYVSKFGPDEKSLVLALRYYLLQ 253
Query: 253 AQR-LGGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYARGAA 311
AQ + G YDLQAIKDIC TYA+ P P AA LTSF+ ++RFCC S Y++G+
Sbjct: 254 AQEEVTGIATGYDLQAIKDICKTYAVSVNPNPTGFLAADLTSFSRLSRFCCLSYYSKGSV 313
Query: 312 AAGFPLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATH 371
A FP YVERRI AD+ E AL ++I DR L++SD EF+ YIYLA+FEC++ +L H
Sbjct: 314 AIAFPSYVERRIMADIAEVDALREYIERDRPSLKISDLEFVKYIYLAYFECYNREQLKRH 373
Query: 372 LRAVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTAK 431
L+ VT P+ + S LG+ AVE FF HVR++LN+ +++ HNV P + + +
Sbjct: 374 LKDVTVSLPDE--DIYKKSSLGKCAVENFFTHVRSRLNVNDHIAHNVLPEQVEMGNKLVR 431
Query: 432 AYLRARTYAPGALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGWPA-------FAPASP 484
+ RAR Y +T + G + A+ ++ RL E L GWP+ +
Sbjct: 432 KFGRARMYLSTTMTNESHFTGICECASVILKRLDTLEMKLQKYGWPSDRVDGSNLMADNQ 491
Query: 485 GEDTAGGTPPPQTCG---------------IVKRLLRLAATEQQ-GPTPPAIAALIRNAA 528
T ++ G IVKRLL L + + + G PA + ++A
Sbjct: 492 NNSTLIPYDKSRSSGMILECSNTHSRGGPMIVKRLLALVSADSRAGGIGPANMLMGIDSA 551
Query: 529 VQTPLPVYRISMVPTGQAFAALAWDDWARITRDARLAEAVV----SAEAAAHPDHGALGR 584
+ PLPVYR+ M QAF L + W R A+A + ++ + D +
Sbjct: 552 IDGPLPVYRVGMSKGRQAFTVLMTECWERTIPSPGSAKAHLIKLNNSYGTSTEDLISRDL 611
Query: 585 RLTDRIR------AQGPVMPPGGLDAGGQMYVNRNEIFNGALAITNIILDLDIALKEPVP 638
LT I + P + G D Q Y+NRNE+FNG LAI NI+LD+DI L+ P+P
Sbjct: 612 FLTSEIEQLIGSTVELPEITCGSADE--QQYINRNEVFNGNLAIGNIVLDVDIHLRNPIP 669
Query: 639 FRRLHEALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKSACRPGPASVGSGSGLGNDDD 698
R +H A+ FR G L A+ LL P A +D +YPCYF+KS+C+ G+ L D
Sbjct: 670 LRLMHAAIRGFRSGILRALALLLPKANIDHGSYPCYFYKSSCKKSRVMGGAPWML---HD 726
Query: 699 GDWFPCYDDAGDEEWAEDPGAMDTSH-DPPDDEVAYFDLCHEVGPTAEPRETDSPVCSCT 757
+ P Y + E+ + G D D D+ + + +P D P C C
Sbjct: 727 AELAPDYSMFENAEFDLEMGIDDPLLIDQIDESLTRWSSESSRSVDLDP---DKP-CGCH 782
Query: 758 DKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYA 817
DKIGLRVC+PVP+PY++ GS T+ G++R+IQQAVLL+R+FVE IG Y+KN+ +ID+GVY
Sbjct: 783 DKIGLRVCIPVPSPYLLVGSKTLAGLSRIIQQAVLLERNFVETIGPYLKNYEIIDSGVYG 842
Query: 818 HGHSLRLPYFAKIAPDGPACGRLLPVFVIPPACKDVPAFVAAHADPRRFHFHAPPTYLAS 877
HG SLRLP+F KI +G RL+P FVIP C D+ F+ AH +P+ FHFH+ +
Sbjct: 843 HGRSLRLPFFGKIDENGIVSRRLVPFFVIPDDCADMEKFIVAHFEPKNFHFHSS---IPL 899
Query: 878 PREIRVLHSLGGDYVSFFERKASRNALEHFGRRETLTEVLGRYNVQPDAGGTVEGFASE- 936
+ +L +GG+Y FFERK + N FG R +L+ L V + + F ++
Sbjct: 900 EKAAIILKDIGGEYAGFFERKITVNRDIFFGTRLSLSIALRERGVDINDCAAITTFVTDH 959
Query: 937 LLGRIVACIETHFPEHAGEYQAVSVRRAVSKDDWVLLQLVPVRGT-LQQSLSCLRFKHGR 995
+L I+ + H P+HA EYQ +SV V K DW+LLQL+P + + +C+RFKH R
Sbjct: 960 ILDDIITYVYEHIPDHAIEYQNLSVSCCVVKSDWILLQLIPNKTIGYRHGFTCVRFKHAR 1019
Query: 996 ASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHTLFTIDAGTPC 1045
A RA+AR+++AL+V A+ RLCV + QQCFAAKC +N+L TLFT+D + C
Sbjct: 1020 ARRASARSYLALNVDAHGRLCVCVIQQCFAAKCGNNKLRTLFTVDIDSKC 1069
>gi|3024795|sp|Q85228|UL52_PRVKA DNA HELICASE/PRIMASE COMPLEX PROTEIN
(DNA REPLICATION PROTEIN UL52)
gi|993016|emb|CAA60690.1| UL52 [Pseudorabies virus]
Length = 962
Score = 686 bits (1770), Expect = 0.0
Identities = 448/1068 (41%), Positives = 574/1068 (52%), Gaps = 136/1068 (12%)
Query: 17 PVEVTALYATDGCVITSSIALLTNSLLGAEP---VYIFSYDAYTHDGRADGPTEQDRFEE 73
P + LYATDGC IT S+ LLT G EP VY+ SY A+ G + + E
Sbjct: 3 PSMIRVLYATDGCAITYSLMLLT----GQEPSGAVYVVSY-AWDGAGLDEAFSLPGERAE 57
Query: 74 SRALYQASGGLNGDSFRVTFCLLGTEVGGTHQARGRTRPMFVCRFERADDVAALQDALAH 133
+ L + G VTFCL G H A R RP+FV A A+ AL
Sbjct: 58 AELLARRPG--------VTFCLTG------HVASVRVRPVFV-----AAATPAVVRALCR 98
Query: 134 GTPLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAAQYDQGASLRSLVG 193
G PL + +D ATFALH +I ALT+ + PRTG A+Y LRS+
Sbjct: 99 GEPLAARDVLEAMDEAATFALHDGLIAALTMVLEQVRPRTGN----AEYAPERPLRSI-- 152
Query: 194 RTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQA 253
++G+RGLT+L+VHHE + LAA+RR Y G+ +PFW++++FGP+EK+LVL TR +L
Sbjct: 153 --AVGRRGLTSLFVHHETQTLAAFRRLY-GNHNTPFWYVARFGPEEKTLVLATRLHLFHP 209
Query: 254 QRLGGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYARGAAAA 313
+ YDL+A+KD+ TY P P + A L SFAA++RFCC S YARG AAA
Sbjct: 210 R------PAYDLRALKDLLLTYNPRVDPNPSGLDPAGLLSFAALSRFCCLSGYARGPAAA 263
Query: 314 GFPLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATHLR 373
YV+ R+ AD E L +I+HDR L++ DREF+TY+YLAHFE F+ RL HL
Sbjct: 264 HAARYVDERVRADRAEMGVLRDYISHDRGSLKLPDREFVTYVYLAHFESFNRARLREHLD 323
Query: 374 AVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTAKAY 433
AV DP A+ SPLG A FF HVRAQLNI +YV NVTP L Y
Sbjct: 324 AVNVTDP---AAPVGRSPLGERAAAAFFRHVRAQLNIRDYVAQNVTPSVARLAPAMGAGY 380
Query: 434 LRARTYAPGALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGW---PAFAPASPGEDTAG 490
+ RTYA A A A G D+A + R+ E+ L P GW P PG D A
Sbjct: 381 VEDRTYAALA---ADAPRGLCDAAAGLARRVTAVEERLAPHGWVRAPDEEQQQPGADGA- 436
Query: 491 GTPPPQTCGIVKRLLRLAATEQQGPTPPAIAALIRNAAVQTPLPVYRISMVPTGQAFAAL 550
+++RLL LAA G A+ AL+ P PVYR+ + QAFA L
Sbjct: 437 ---------VLRRLLELAAAPGGGRARTALGALLGLPDACPPAPVYRVELAHRRQAFAVL 487
Query: 551 AWDDWARITRDARLAEAVVSAEAAAHPDHGALGRRLTDRIRAQGPVMPPGGLDAGGQMYV 610
A D W R T A + E AAH + QMYV
Sbjct: 488 AGDAWGRAT-----ARRDAAPEMAAH--------------------------EPAAQMYV 516
Query: 611 NRNEIFNGALAITNIILDLDIALKEPVPFRRLHEALGHFRRGALAAVQLLFPAARVDPDA 670
+R+E+FN LA+TNI+LD+D L PVP L A+ FRR L A+ LLFP A D A
Sbjct: 517 SRHEVFNARLAVTNIVLDVDFRLARPVPAGTLEAAMRGFRRAVLDALALLFPEADGDWAA 576
Query: 671 YPCYFFKSACRPG---PASVGSGSGLGNDDDGDWFPCYDDA---------GDEEWAE-DP 717
+PCY +KSAC PG A+ GS S +DD + P DDA GDE+WA+ D
Sbjct: 577 HPCYVYKSACPPGGALAAAAGSASAASSDDGLEEAPWDDDAALADFGAAPGDEDWADWDA 636
Query: 718 GAMDTSHDPPDDEVAYF--DLCHEVGPTAEPRET----DSPVCSCTDKIGLRVCMPVPAP 771
G + DDEV + G +A R + P C C K+G RVC PVP+P
Sbjct: 637 GVPAEVYTCDDDEVGVGIGGAGGDPGASALVRAPVPADERPPCGCRAKMGFRVCTPVPSP 696
Query: 772 YVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIA 831
Y V G+ T+RG+ARV+QQAVLL+RDF+E +G Y+++F +DTGVYAHG SLRLP+FAK+
Sbjct: 697 YAVAGADTVRGLARVLQQAVLLERDFIEPMGPYLQDFTFVDTGVYAHGRSLRLPFFAKV- 755
Query: 832 PDGPAC-GRLLPVFVIPPACKDVPAFVAAHADPRRFHFHAPPTYLASPREIRVLHSLGGD 890
DG C GRLLP PP DPR FHFHA P + + RVLHSLGG+
Sbjct: 756 -DGGGCHGRLLPFGDAPP----------GFDDPRNFHFHARPAHAVT----RVLHSLGGE 800
Query: 891 YVSFFERKASRNALEHFGRRETLTEVLGRYNVQPDAGGTVEGFASEL-LGRIVACIETHF 949
Y SFFERKA+RN F RR L ++L V + +E F +++ + ++ ++ HF
Sbjct: 801 YESFFERKAARNREAFFARRTPLADMLRGLAVDAEDRRALEAFVADVAMAPVLRHLDAHF 860
Query: 950 PEHAGEYQAVSVRRAVSKDDWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSV 1009
A EY + +R V+K DWVL QL SCLR +H R+ ARTFVALSV
Sbjct: 861 NGRAHEYAGATAQRVVAKPDWVLFQLCG-----SARFSCLRARHARS--PPARTFVALSV 913
Query: 1010 GANNRLCVSLCQQCFAAKCDSNRLHTLFTIDAGTPCSPSVPCSTSQPS 1057
A++RLC+SL QQCFA KC SN T+FT + G CS + TS S
Sbjct: 914 DAHDRLCISLSQQCFATKCGSNATRTIFTAEVGQSCSSAGARCTSSSS 961
>gi|993017|emb|CAA60691.1| UL52 [Pseudorabies virus]
Length = 958
Score = 685 bits (1767), Expect = 0.0
Identities = 447/1065 (41%), Positives = 573/1065 (52%), Gaps = 136/1065 (12%)
Query: 20 VTALYATDGCVITSSIALLTNSLLGAEP---VYIFSYDAYTHDGRADGPTEQDRFEESRA 76
+ LYATDGC IT S+ LLT G EP VY+ SY A+ G + + E+
Sbjct: 2 IRVLYATDGCAITYSLMLLT----GQEPSGAVYVVSY-AWDGAGLDEAFSLPGERAEAEL 56
Query: 77 LYQASGGLNGDSFRVTFCLLGTEVGGTHQARGRTRPMFVCRFERADDVAALQDALAHGTP 136
L + G VTFCL G H A R RP+FV A A+ AL G P
Sbjct: 57 LARRPG--------VTFCLTG------HVASVRVRPVFV-----AAATPAVVRALCRGEP 97
Query: 137 LQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAAQYDQGASLRSLVGRTS 196
L + +D ATFALH +I ALT+ + PRTG A+Y LRS+ +
Sbjct: 98 LAARDVLEAMDEAATFALHDGLIAALTMVLEQVRPRTGN----AEYAPERPLRSI----A 149
Query: 197 LGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRL 256
+G+RGLT+L+VHHE + LAA+RR Y G+ +PFW++++FGP+EK+LVL TR +L +
Sbjct: 150 VGRRGLTSLFVHHETQTLAAFRRLY-GNHNTPFWYVARFGPEEKTLVLATRLHLFHPR-- 206
Query: 257 GGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYARGAAAAGFP 316
YDL+A+KD+ TY P P + A L SFAA++RFCC S YARG AAA
Sbjct: 207 ----PAYDLRALKDLLLTYNPRVDPNPSGLDPAGLLSFAALSRFCCLSGYARGPAAAHAA 262
Query: 317 LYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATHLRAVT 376
YV+ R+ AD E L +I+HDR L++ DREF+TY+YLAHFE F+ RL HL AV
Sbjct: 263 RYVDERVRADRAEMGVLRDYISHDRGSLKLPDREFVTYVYLAHFESFNRARLREHLDAVN 322
Query: 377 THDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTAKAYLRA 436
DP A+ SPLG A FF HVRAQLNI +YV NVTP L Y+
Sbjct: 323 VTDP---AAPVGRSPLGERAAAAFFRHVRAQLNIRDYVAQNVTPSVARLAPAMGAGYVED 379
Query: 437 RTYAPGALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGW---PAFAPASPGEDTAGGTP 493
RTYA A A A G D+A + R+ E+ L P GW P PG D A
Sbjct: 380 RTYAALA---ADAPRGLCDAAAGLARRVTAVEERLAPHGWVRAPDEEQQQPGADGA---- 432
Query: 494 PPQTCGIVKRLLRLAATEQQGPTPPAIAALIRNAAVQTPLPVYRISMVPTGQAFAALAWD 553
+++RLL LAA G A+ AL+ P PVYR+ + QAFA LA D
Sbjct: 433 ------VLRRLLELAAAPGGGRARTALGALLGLPDACPPAPVYRVELAHRRQAFAVLAGD 486
Query: 554 DWARITRDARLAEAVVSAEAAAHPDHGALGRRLTDRIRAQGPVMPPGGLDAGGQMYVNRN 613
W R T A + E AAH + QMYV+R+
Sbjct: 487 AWGRAT-----ARRDAAPEMAAH--------------------------EPAAQMYVSRH 515
Query: 614 EIFNGALAITNIILDLDIALKEPVPFRRLHEALGHFRRGALAAVQLLFPAARVDPDAYPC 673
E+FN LA+TNI+LD+D L PVP L A+ FRR L A+ LLFP A D A+PC
Sbjct: 516 EVFNARLAVTNIVLDVDFRLARPVPAGTLEAAMRGFRRAVLDALALLFPEADGDWAAHPC 575
Query: 674 YFFKSACRPG---PASVGSGSGLGNDDDGDWFPCYDDA---------GDEEWAE-DPGAM 720
Y +KSAC PG A+ GS S +DD + P DDA GDE+WA+ D G
Sbjct: 576 YVYKSACPPGGALAAAAGSASAASSDDGLEEAPWDDDAALADFGAAPGDEDWADWDAGVP 635
Query: 721 DTSHDPPDDEVAYF--DLCHEVGPTAEPRET----DSPVCSCTDKIGLRVCMPVPAPYVV 774
+ DDEV + G +A R + P C C K+G RVC PVP+PY V
Sbjct: 636 AEVYTCDDDEVGVGIGGAGGDPGASALVRAPVPADERPPCGCRAKMGFRVCTPVPSPYAV 695
Query: 775 HGSLTMRGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDG 834
G+ T+RG+ARV+QQAVLL+RDF+E +G Y+++F +DTGVYAHG SLRLP+FAK+ DG
Sbjct: 696 AGADTVRGLARVLQQAVLLERDFIEPMGPYLQDFTFVDTGVYAHGRSLRLPFFAKV--DG 753
Query: 835 PAC-GRLLPVFVIPPACKDVPAFVAAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYVS 893
C GRLLP PP DPR FHFHA P + + RVLHSLGG+Y S
Sbjct: 754 GGCHGRLLPFGDAPP----------GFDDPRNFHFHARPAHAVT----RVLHSLGGEYES 799
Query: 894 FFERKASRNALEHFGRRETLTEVLGRYNVQPDAGGTVEGFASEL-LGRIVACIETHFPEH 952
FFERKA+RN F RR L ++L V + +E F +++ + ++ ++ HF
Sbjct: 800 FFERKAARNREAFFARRTPLADMLRGLAVDAEDRRALEAFVADVAMAPVLRHLDAHFNGR 859
Query: 953 AGEYQAVSVRRAVSKDDWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGAN 1012
A EY + +R V+K DWVL QL SCLR +H R+ ARTFVALSV A+
Sbjct: 860 AHEYAGATAQRVVAKPDWVLFQLCG-----SARFSCLRARHARS--PPARTFVALSVDAH 912
Query: 1013 NRLCVSLCQQCFAAKCDSNRLHTLFTIDAGTPCSPSVPCSTSQPS 1057
+RLC+SL QQCFA KC SN T+FT + G CS + TS S
Sbjct: 913 DRLCISLSQQCFATKCGSNATRTIFTAEVGQSCSSAGARCTSSSS 957
>gi|9629822|ref|NP_045306.1| component of DNA helicase/primase complex
[Bovine herpesvirus 1]
gi|995630|emb|CAA90916.1| UL52 [Bovine herpesvirus 1]
gi|2653295|emb|CAA06081.1| component of DNA helicase/primase complex
[Bovine herpesvirus type 1.1]
Length = 1074
Score = 676 bits (1744), Expect = 0.0
Identities = 446/1085 (41%), Positives = 566/1085 (52%), Gaps = 106/1085 (9%)
Query: 23 LYATDGCVITSSIALLTNSLLGAEPVYIFSYDAYTHDGRADGPTEQDRFEESRALYQASG 82
LYATDGC I S+ LLT Y+ SY+ G + + + AL A
Sbjct: 14 LYATDGCAIGFSLMLLTGQEEPGRGAYVVSYNWPGRLAACLGGESPN--DVALALADARP 71
Query: 83 GLNGDSFRVTFCLLGTEVGGTHQARGRTRPMFVCRFERADDVAALQDALAHGTPLQPDHI 142
V F LLG GG+ A R + V +RA A + P +
Sbjct: 72 -------LVAFYLLGGPPGGSAAATPRLARLRVHLQQRAGRARARRRTAPRQGPTRARAA 124
Query: 143 AATLDAEATFALHANMILALTVAINNASPRTGRDAAAAQYDQG-ASLRSLVGRTSLGQRG 201
A A + AL VA +PRTGR A A+Y +G ++RS + G+RG
Sbjct: 125 RAPRRGRHLCAARGHDH-ALLVATEQLAPRTGRTADDARYVEGQTTVRSALRARPAGRRG 183
Query: 202 LTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGA 261
L +LY+HHE + +AAYRR Y S +PFWFLSKFGP EK+LVL TR+Y+ QA+R G A A
Sbjct: 184 LASLYIHHEHKTVAAYRRLYSNSGATPFWFLSKFGPGEKTLVLATRFYVFQAERAGDA-A 242
Query: 262 TYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYARGAAAAGFPLYVER 321
TYDLQA++D ATYA+ P P ++ L SFAA+ FCC S YARGA AAG P YV
Sbjct: 243 TYDLQAVRDCLATYAVAAPPNPSGLAFPDLVSFAALAAFCCRSGYARGAVAAGAPAYVAA 302
Query: 322 RIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATHLRAVTTHDPN 381
RI AD+ E L ++I HDR L+V+D EF+ Y+YLA+FE F+ ++ HLRAVT +P
Sbjct: 303 RIEADLAEVRCLREYIDHDRRSLKVADPEFVAYVYLAYFEGFNRRQITEHLRAVTATEPP 362
Query: 382 PAASTEQP-----SPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTAKAYLRA 436
P S L AV+ FF HVRAQ N+ Y++ NV L TA+AY RA
Sbjct: 363 DGGEALAPRLAGVSRLRERAVDAFFRHVRAQFNVQSYIEQNVAVAVVRLPPATAEAYARA 422
Query: 437 RTY----APGALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGWPAFAPAS--------P 484
RTY A A P C D A + L E GW AP + P
Sbjct: 423 RTYARLLAATANGPGRTIC---DGAAALRAALDHLEGQAARFGWVLHAPGAPSASAVPGP 479
Query: 485 GEDTA-------GGTPP---PQTCGIVKRLLRLAATEQQGPTPPAIAALIRNAAVQTPLP 534
G D A GG P P CG+ KRLL LAA + P + L P P
Sbjct: 480 GLDAALRVGAPDGGASPDATPACCGVSKRLLELAAAAARDGAHP-LDGLFGARGTAAPTP 538
Query: 535 VYRISMVPTGQAFAALAWDDWARITRDARL------AEAVVSAEAAAHPDHGALGRR--- 585
VYR+ + QAFA DDWA +T A L E +A AAA AL R
Sbjct: 539 VYRVELPRGHQAFAVADGDDWAAVTSVAALDPDEVAVEVAAAAAAAAESGRDALVERDAR 598
Query: 586 ----LTDRI---------RAQGPVMPPGGLDAGGQMYVNRNEIFNGALAITNIILDLDIA 632
LT+R R+ GP P Q YVNRNE+FN LA+TNI+LD+D
Sbjct: 599 LTALLTERAACAAGRSDRRSLGPAAP------RDQYYVNRNELFNARLAVTNIVLDVDFR 652
Query: 633 LKEPVPFRRLHEALGHFRRGALAAVQLLFPAARVDP-DAYPCYFFKSACRPGPASVGSGS 691
LK P+P LH A+ FRRGALAA+ LFP D A+PC+F+KSAC P A+ G
Sbjct: 653 LKRPLPRGDLHGAMRSFRRGALAALAALFPEIAADAWPAHPCFFYKSAC-PSAAASNLGD 711
Query: 692 GLGNDDDGDWFPCYDDAGDEEWAEDPGAMDTSHDPPDDEVAYFDLCHEVGPT--AEPRET 749
G D W DAG W E A+ + E Y C +V A P ET
Sbjct: 712 G---DASPSWAAPDRDAG---WDEYESAL-----AREGEAQY--SCEDVSDPAGARPEET 758
Query: 750 D-----------SPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFV 798
+ C C DK+G RV +PVPAPY++ G T++G+AR++Q AV+L+R F
Sbjct: 759 GGAEGAGSAAALTTACGCDDKMGFRVAVPVPAPYIIAGGPTLKGIARLVQHAVMLERPFA 818
Query: 799 EAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPA-CGR-LLPVFVIPPACKDVPAF 856
EA+ Y+++F +D VY HGHSLRLP+F K PD + GR LLP +V+P C DV AF
Sbjct: 819 EAMSRYLRDFAFVDAAVYTHGHSLRLPFFGK--PDAASNVGRWLLPFYVVPERCDDVAAF 876
Query: 857 VAAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYVSFFERKASRNALEHFGRRETLTEV 916
VAAH DP FHFHA P RE R H +GG+YVSFFERKA+ N G R +L
Sbjct: 877 VAAHRDPHHFHFHAAPP-AGGRREARRAH-VGGEYVSFFERKAAVNRAAFHGVRVSLRRA 934
Query: 917 LGRYNVQPDAGGTVEGFASELL-GRIVACIETHFPEHAGEYQAVSVRRAVSKDDWVLLQL 975
L V G VE F ++++ + + H+P+ A EYQ R +K DW+L QL
Sbjct: 935 LAAVGVDGGDRGAVEEFIADVIEAELAPYMAEHYPQAAREYQGAGARLVAAKADWLLAQL 994
Query: 976 VPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHT 1035
VP R Q CLR HGRA++ AR+ V+LSV +++RLC SL QQCFA KC SNRL T
Sbjct: 995 VPARAGTAQGFGCLRAAHGRAAQNKARSLVSLSVDSHDRLCASLIQQCFATKCGSNRLGT 1054
Query: 1036 LFTID 1040
+FT+D
Sbjct: 1055 VFTVD 1059
>gi|9635087|ref|NP_057815.1| UL52 [Gallid herpesvirus 2]
gi|7673164|gb|AAF66788.1|AF147806_52 UL52 [Gallid herpesvirus 2]
Length = 1075
Score = 653 bits (1685), Expect = 0.0
Identities = 405/1071 (37%), Positives = 573/1071 (52%), Gaps = 63/1071 (5%)
Query: 20 VTALYATDGCVITSSIALLTNSLLGAEPVYIFSY----DAYTHDGRADG-PTEQDRFEES 74
+ L+A DGC ++ S+ALLT + VY+ Y D ++ DG P +R +
Sbjct: 18 IKVLFAVDGCAVSFSLALLTGQIPSTNSVYVIGYWDPSDRFSSIPFLDGDPNTNERISTT 77
Query: 75 RALYQASGGLNGDSFRVTFCLLGTEVGGTHQA--RGRTRPMFVCRFERADDVAALQDALA 132
+ RV FCLL G A + RTR +FVCRF ++ A+ +++
Sbjct: 78 VCNLEDVPS----PLRVEFCLLNQMASGMGGADLKLRTRAIFVCRFTSWSEMNAIANSII 133
Query: 133 HGTPLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAAQYDQGASLRSLV 192
+GTP+Q + AT+ TF LH LAL V +N S + + S+
Sbjct: 134 YGTPIQAGVLQATISETETFMLHDEFNLALHVFLNGLSLKGRNKKDVCMSLNHNYISSVS 193
Query: 193 GRTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQ 252
G+RGLT LY+ HE +V AAYRR Y GS + FW++SKFGPDEKSLVL RYYLLQ
Sbjct: 194 ENFPRGKRGLTGLYLQHEQKVTAAYRRIYGGSTTTAFWYVSKFGPDEKSLVLALRYYLLQ 253
Query: 253 AQR-LGGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITR-FCCTSQYARGA 310
AQ + G YDLQAIKDIC TYA+ P + F +
Sbjct: 254 AQEEVTGIATGYDLQAIKDICKTYAVSVNPNTHGIFGCRFNVILVDYHVFVVEVTIPKAL 313
Query: 311 AAAGFPLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLAT 370
FP YVERRI AD+ E AL ++I DR L++SD EF+ YIYLA+FEC++ +L
Sbjct: 314 CPIAFPSYVERRIMADIAEVDALREYIERDRPSLKISDLEFVKYIYLAYFECYNREQLKR 373
Query: 371 HLRAVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTA 430
HL+ VT P+ + S LG+ AVE FF HVR++LN+ +++ HNV P + +
Sbjct: 374 HLKDVTVSLPDE--DIYKKSSLGKCAVENFFTHVRSRLNVNDHIAHNVLPEQVEMGNKLV 431
Query: 431 KAYLRARTYAPGALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGWPA-------FAPAS 483
+ + RAR Y +T + G + A+ ++ RL E L GWP+ +
Sbjct: 432 RKFGRARMYLSTTMTNESHFTGICECASVILKRLDTLEMKLQKYGWPSDRVDGSNLMADN 491
Query: 484 PGEDTAGGTPPPQTCG---------------IVKRLLRLAATEQQ-GPTPPAIAALIRNA 527
T ++ G IVKRLL L + + + G PA + ++
Sbjct: 492 QNNSTLIPYDKSRSSGMILECSNTHSRGGPMIVKRLLALVSADSRAGGIGPANMLMGIDS 551
Query: 528 AVQTPLPVYRISMVPTGQAFAALAWDDWARITRDARLAEAVV----SAEAAAHPDHGALG 583
A+ PLPVYR+ M QAF L + W R A+A + ++ + D +
Sbjct: 552 AIDGPLPVYRVGMSKGRQAFTVLMTECWERTIPSPGSAKAHLIKLNNSYGTSTEDLISRD 611
Query: 584 RRLTDRIR------AQGPVMPPGGLDAGGQMYVNRNEIFNGALAITNIILDLDIALKEPV 637
LT I + P + G D Q Y+NRNE+FNG LAI NI+LD+DI L+ P+
Sbjct: 612 LFLTSEIEQLIGSTVELPEITCGSADE--QQYINRNEVFNGNLAIGNIVLDVDIHLRNPI 669
Query: 638 PFRRLHEALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKSACRPGPASVGSGSGLGNDD 697
P R +H A+ FR G L A+ LL P A +D +YPCYF+KS+C+ G+ L
Sbjct: 670 PLRLMHAAIRGFRSGILRALALLLPKANIDHGSYPCYFYKSSCKKSRVMGGAPWML---H 726
Query: 698 DGDWFPCYDDAGDEEWAEDPGAMDTSH-DPPDDEVAYFDLCHEVGPTAEPRETDSPVCSC 756
D + P Y + E+ + G D D D+ + + +P D P C C
Sbjct: 727 DAELAPDYSMFENAEFDLEMGIDDPLLIDQIDESLTRWSSESSRSVDLDP---DKP-CGC 782
Query: 757 TDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVY 816
DKIGLRVC+PVP+PY++ GS T+ G++R+IQQAVLL+R+FVE IG Y+KN+ +ID+GVY
Sbjct: 783 HDKIGLRVCIPVPSPYLLVGSKTLAGLSRIIQQAVLLERNFVETIGPYLKNYEIIDSGVY 842
Query: 817 AHGHSLRLPYFAKIAPDGPACGRLLPVFVIPPACKDVPAFVAAHADPRRFHFHAPPTYLA 876
HG SLRLP+F KI +G RL+P FVIP C D+ F+ AH +P+ FHFH+ +
Sbjct: 843 GHGRSLRLPFFGKIDENGIVSRRLVPFFVIPDDCADMEKFIVAHFEPKNFHFHSS---IP 899
Query: 877 SPREIRVLHSLGGDYVSFFERKASRNALEHFGRRETLTEVLGRYNVQPDAGGTVEGFASE 936
+ +L +GG+Y FFERK + N FG R +L+ L V + + F ++
Sbjct: 900 LEKAAIILKDIGGEYAGFFERKITVNRDIFFGTRLSLSIALRERGVDINDCAAITTFVTD 959
Query: 937 -LLGRIVACIETHFPEHAGEYQAVSVRRAVSKDDWVLLQLVPVRGT-LQQSLSCLRFKHG 994
+L I+ + H P+HA EYQ +SV V K DW+LLQL+P + + +C+RFKH
Sbjct: 960 HILDDIITYVYEHIPDHAIEYQNLSVSCCVVKSDWILLQLIPNKTIGYRHGFTCVRFKHA 1019
Query: 995 RASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHTLFTIDAGTPC 1045
RA RA+AR+++AL+V A+ RLCV + QQCFAAKC +N+L TLFT+D + C
Sbjct: 1020 RARRASARSYLALNVDAHGRLCVCVIQQCFAAKCGNNKLRTLFTVDIDSKC 1070
>gi|9625881|ref|NP_040129.1| DNA helicase-primase complex [Human
herpesvirus 3]
gi|136943|sp|P09270|UL52_VZVD HELICASE/PRIMASE COMPLEX PROTEIN
(PROBABLE DNA REPLICATION GENE 6 PROTEIN)
gi|73966|pir||WZBE6 gene 6 protein - human herpesvirus 3
gi|59995|emb|CAA27889.1| unnamed protein product [Human herpesvirus
3]
Length = 1083
Score = 635 bits (1638), Expect = e-180
Identities = 420/1108 (37%), Positives = 584/1108 (51%), Gaps = 107/1108 (9%)
Query: 20 VTALYATDGCVITSSIALLTNSLLGAEPVYIFSY-------DAYTHDGRADG----PTEQ 68
+ L+AT GC I+ S+ LLT + EP+Y+ SY D + +GR + PT++
Sbjct: 9 IRLLFATKGCAISHSLLLLTGQI-STEPLYVVSYTWTPDLDDVFVKNGREEITQVIPTKR 67
Query: 69 DR-FEESRALYQASGGLNGDSFRVTFCLLGTEVGGTHQARGRTRPMFVCRFERADDVAAL 127
R E+ Q V F L+G T R R P+F C F+ D AL
Sbjct: 68 PREVTENDEENQIMHLFCSRDVNVIFYLIGGF--STGDVRSRVWPIFFCCFKTQTDFKAL 125
Query: 128 QDALAHGTPLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAAQYDQGAS 187
AL +G PL P I+ TL TF +H+ +I L V ++ + + D + A+
Sbjct: 126 YKALWYGAPLNPHIISDTLCISETFDIHSEVIQTLMVTTHHLNRKGLSDNGLCITE--AT 183
Query: 188 LRSLVGRTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTR 247
L LV + S+G++ LT+LY H+E +VLAAYRR Y+G SPFW++ +FGP EK+LVL TR
Sbjct: 184 LCKLV-KKSVGRQELTSLYAHYERQVLAAYRRLYWGYGCSPFWYIVRFGPSEKTLVLATR 242
Query: 248 YYLLQAQRLGGAGAT--YDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQ 305
YYLLQ T YDLQAIKD+ TY +P P + + L SF ++ FCC+S
Sbjct: 243 YYLLQTDTSYNTLETPLYDLQAIKDLFLTYQVPALPNCSGYNISDLLSFDKLSMFCCSST 302
Query: 306 YARGAAAAGFPLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSP 365
Y RG A Y+ +RI D E A+ ++IT+DR L+V DREF+ YIYLAHFECF+
Sbjct: 303 YTRGLTAKNALSYILQRIHTDTTEIHAVSEYITNDRKGLKVPDREFVDYIYLAHFECFNR 362
Query: 366 PRLATHLRAVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVL 425
++A HL+AVT D + S LG+ A FF HVR++LN+ +Y+K NV T L
Sbjct: 363 KQIADHLQAVTYSDFVNKPVLLKSSNLGKRATANFFNHVRSRLNMRDYIKKNVICDVTEL 422
Query: 426 DGDTAKAYLRARTYAPGALTPAPA--YCGAVDSATKMMGRLADAEKLLVPRGWPAFAPAS 483
+ Y +TY A + G D AT + R+ + EK P GW + P++
Sbjct: 423 GPEIGHKYTITKTYTLSLTYAAKPSKFIGVCDLATTLTRRVENIEKQFSPYGWSSTIPSN 482
Query: 484 P------------------------GEDT---AGGTPPPQTCGIVKRLLRLAATEQQGPT 516
P DT +G T + GI K LL +A
Sbjct: 483 PPGFDELSNFEDSGVSAEALRAANFANDTPNQSGRTGFDTSPGITKLLLFFSAATGIATH 542
Query: 517 PPAIA-------ALIRNAAVQTPLPVYRISMVPTGQAFAALAWDDWARITRDARLA-EAV 568
+I ALI ++ V P+PVYR+++ QAFA +A D W+ IT L EA
Sbjct: 543 DVSILSYKTPLEALIGHSEVTGPMPVYRVALPHGAQAFAVIANDTWSSITNRYTLPHEAR 602
Query: 569 VSAE----------AAAHPDHGALGRRLTDRIRAQGPVMPPGGLDAGGQMYVNRNEIFNG 618
+ AE AA L L+ ++ + D Q+Y+NRNE+FN
Sbjct: 603 LIAEDLKQINPCNFVAASLRDMQLTLLLSTSVKNVSKISSNIPKD---QLYINRNELFNT 659
Query: 619 ALAITNIILDLDIALKEPVPFRRLHEALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKS 678
L ITN+ILD+D +++P+P LH + FR G L A+QLLFP A V+P+ PCYF+K+
Sbjct: 660 NLIITNLILDVDFHIRKPIPLGILHAGMRAFRHGILTAMQLLFPKAVVNPNKDPCYFYKT 719
Query: 679 ACRPGPASVGSGSGLGND----------DDGDWFPCYDDAGDEE-WAEDPGAMDTSHDPP 727
AC V L + ++G+ + C ++ E+ W D H
Sbjct: 720 ACPEPTVEVLDDDNLLDITSHSDIDFYIENGELYTCVEENYTEDVWFFDTQTTSEVHTHA 779
Query: 728 DDEVAYFDLCHEVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVI 787
D V+ + HE P C+C +KIG RVC+P+P PY + GS T++G A+++
Sbjct: 780 D--VSNNENLHETLP-----------CNCKEKIGFRVCVPIPNPYALVGSSTLKGFAQIL 826
Query: 788 QQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRLLPVFVIP 847
QQAVLL+R+FVE IG Y+++F IDTGVY+HGHSLRLP+F+K+ G A G+LLP +V+P
Sbjct: 827 QQAVLLEREFVEYIGPYLRDFSFIDTGVYSHGHSLRLPFFSKVTTTGTAVGQLLPFYVVP 886
Query: 848 PACKDVPAFVAAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYVSFFERKASRNALEHF 907
C D+ AFV +H +P FHFH+ P + I LH+LGG+Y FFERK +RN
Sbjct: 887 EQCIDILAFVTSHRNPANFHFHSRPQSNVPVQFI--LHNLGGEYAEFFERKVARNKQIFS 944
Query: 908 GRRETLTEVLGRYNVQPDAGGTVEGFA-SELLGRIVACIETHFPEHAGEYQAVSVRRAVS 966
+ +LT+ L V T+E F S +L IV I HFP EY S +
Sbjct: 945 SPQISLTKALKERGVTCLDAFTLEAFVDSTILESIVEHIAVHFPGRDREYTLTSSKCIAI 1004
Query: 967 KDDWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAA 1026
K DWVL QL + GT + +CLR+ H R R RTFV+L V +NRLC+SL QQCFA
Sbjct: 1005 KRDWVLFQL--ICGT--KGFTCLRYPH-RGGRTAPRTFVSLRVDHHNRLCISLAQQCFAT 1059
Query: 1027 KCDSNRLHTLFTIDAGTPCSPSVPCSTS 1054
KCDSNR+HT+FT++ P+ P TS
Sbjct: 1060 KCDSNRMHTIFTLEV-----PNYPNLTS 1082
>gi|13242454|ref|NP_077420.1| DNA helicase-primase complex component
[Cercopithecine herpesvirus 7]
gi|11036606|gb|AAG27235.1|AF275348_56 DNA helicase-primase complex
component [Cercopithecine herpesvirus 7]
Length = 1081
Score = 618 bits (1594), Expect = e-175
Identities = 385/1078 (35%), Positives = 569/1078 (52%), Gaps = 83/1078 (7%)
Query: 20 VTALYATDGCVITSSIALLTNSLLGAEPVYIFSY-------DAYTHDGRADG--PTEQDR 70
+ L+AT C ++ + LLT + +PVY+ SY D + DG AD PT++ R
Sbjct: 10 IRILFATKSCAVSYCLQLLTGQI-SEDPVYVLSYTWTADLNDVFYEDGWADKEVPTKRIR 68
Query: 71 FEESRALYQASGGLNGDSFRVTFCLLGTEVGGTHQARGRTRPMFVCRFERADDVAALQDA 130
+ + L+G RV F L+G + G +AR P+FVC F + D+ L +
Sbjct: 69 LDGPVKTISSYNYLHGKRVRVIFYLIGGVITGAIKAR--IWPVFVCEFSKEGDLTNLCKS 126
Query: 131 LAHGTPLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAAQYDQGASLRS 190
L G PLQ ++ TL TFA+HA++I L + + ASP+T A Y ++
Sbjct: 127 LWFGEPLQTRVLSETLHELDTFAIHADIIQCL-LTTHRASPKTTHCKVDANYKDNGLIQL 185
Query: 191 LVGRTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYL 250
+ + L +LY H+E VLAAYRR Y+G + +PFW++++FGP EK+LVL RYY
Sbjct: 186 ---NKKMERDHLISLYAHYERNVLAAYRRIYWGYSCTPFWYVARFGPYEKTLVLAMRYYF 242
Query: 251 LQAQR--LGGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYAR 308
LQ + + YDLQAIKD+ TY +P S + L +F ++ FCC+S Y R
Sbjct: 243 LQTETSYMTVTDKVYDLQAIKDLLETYNVPERANLSGYSISDLITFEKLSAFCCSSMYTR 302
Query: 309 GAAAAGFPLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRL 368
G A PLY+ RI+ DV E ++ +IT+DR LRVSDREF+ YIYLA+FECF+ ++
Sbjct: 303 GIVAINAPLYISSRISIDVSEIESVITYITNDRKGLRVSDREFVDYIYLAYFECFNRKQI 362
Query: 369 ATHLRAVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGD 428
HL AV + S LG +AV+ FF HVR+++NI +Y+ NV L
Sbjct: 363 KEHLNAVICNSVEQVPIIANMSRLGLQAVDNFFTHVRSRVNINDYISKNVICDFRTLTNA 422
Query: 429 TAKAYLRARTYA--PGALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGW---------- 476
A Y++ +TYA ++ G DSA + R+ D EK+ GW
Sbjct: 423 MAVKYIKEKTYAIVNKSVCSRLDVVGICDSAISLTHRIEDIEKVFGKLGWLSTKSFINNV 482
Query: 477 -------------PAFAPASPGEDTAGGTPPPQ-TCGIVKRLLRLAATEQQGPTP----- 517
A A+ P + I + LL +T QG
Sbjct: 483 CFSSNDNESDVSVEAIKAANQANSINSHKPAWEYNHSITRTLLFFCSTNIQGNNSLTATY 542
Query: 518 -PAIAALIRNAAVQTPLPVYRISMVPTGQAFAALAWDDWARITRDARLAEAVVSAEAAAH 576
AL+ + P+PVYRIS+ Q+FA + +D W +T E + E+
Sbjct: 543 KSPFQALLGCTKISGPIPVYRISLPQGRQSFALIVYDFWKCVTDIYTQNEMLSVMESITG 602
Query: 577 PDHGAL---GRRLTDRIRAQGPVMPPGGLDAGGQMYVNRNEIFNGALAITNIILDLDIAL 633
+ L ++T+ + A QMY+NRNE+FN LA++NIILD+D +
Sbjct: 603 KEKLPLCFRDMKVTNELLATVKCSGIASSIPDEQMYINRNELFNSTLAVSNIILDVDFHV 662
Query: 634 KEPVPFRRLHEALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKSACR--PGPASVGSGS 691
++ +P LH + FR GAL AVQLLF + VD ++YPCYF+KS+C V
Sbjct: 663 RKAIPKGVLHAGMRAFRHGALTAVQLLFCNSAVDINSYPCYFYKSSCNITESMCDVDENC 722
Query: 692 GLGNDDDGDWFPCYDDAGDEEWAEDPGAMDTSHDPPDDEVAYFDLCHEVGPTAEPRETDS 751
+ + + D + Y+ + DDE+ D+ + + + E+++
Sbjct: 723 DIVENYNVDEYNLYETV--------------EMNDVDDEMWLCDIVNNIQQYTKSEESET 768
Query: 752 -------PVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSY 804
CSC +G RVC+PVP PYV+ G T++ +A+++QQAVLL+ DFV+ +G Y
Sbjct: 769 IPDIYNTNTCSCNKNLGFRVCIPVPPPYVLTGPSTLKAIAKIVQQAVLLENDFVKHMGKY 828
Query: 805 VKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRLLPVFVIPPACKDVPAFVAAHADPR 864
+K+F IDTGVY+HGHSLRLP+F+K+ + GRLLP +VIP C D+ +F++AH++P
Sbjct: 829 LKDFSFIDTGVYSHGHSLRLPFFSKVTHNTTFYGRLLPFYVIPDVCSDILSFISAHSNPE 888
Query: 865 RFHFHAPPTYLASPREIRVLHSLGGDYVSFFERKASRNALEHFGR-RETLTEVLGRYNVQ 923
FHFH+ P++ + I VLH++ G+Y FFERK + N E FG + +L + L + ++
Sbjct: 889 NFHFHSKPSF--NYDTIIVLHNITGEYADFFERKVAYNK-EVFGTPKVSLEKTLQSHGLE 945
Query: 924 PDAGGTVEGFA-SELLGRIVACIETHFPEHAGEYQAVSVRRAVSKDDWVLLQLVP-VRGT 981
T+E F S ++ I+ I HFP EY S + V K DWVLLQL ++ +
Sbjct: 946 TVDAHTIEAFIDSIVIESIIQYIHLHFPGREREYSMTSSKCIVVKRDWVLLQLTHCLKTS 1005
Query: 982 LQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHTLFTI 1039
+Q +CLR+ H R R R F++L V +NRL VSL QQCFA KCDSNR+HT+FT+
Sbjct: 1006 GRQGFTCLRYPH-RGGRTAPRNFISLRVDHHNRLSVSLSQQCFATKCDSNRMHTIFTL 1062
>gi|6065853|emb|CAB58356.1| helicase-primase complex [Gallid
herpesvirus 1]
Length = 1110
Score = 424 bits (1091), Expect = e-117
Identities = 337/1115 (30%), Positives = 507/1115 (45%), Gaps = 147/1115 (13%)
Query: 19 EVTALYATDGCVITSSIALLTNSLLGAEPVYIFSY---DAYTHDGRADGPTEQDRFEESR 75
E+ LYATDG + S+ LL L E +Y+ ++ DA D D P
Sbjct: 50 EIRVLYATDGYPVVCSLHLLLGQALQPE-IYVLAFSHVDALAQDFCKDSP---------- 98
Query: 76 ALYQASGGLNGDSFRVTFCLLGTEVGGTHQARGRTRPMFVCRFERADDVAALQDALAHGT 135
++TF L G + R R+RP+FVCRF A +++ALA G
Sbjct: 99 -------------LKITFFLPANT--GAEKYRQRSRPVFVCRFV-GQGAATMREALAEGF 142
Query: 136 PLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAAQYDQGASLRSLVGRT 195
P+ + T+D E TFALH ++I AL V I A T + +A + + + R
Sbjct: 143 PIDAKLLLETMDLEETFALHTDIIEALGV-IFRAENTTNKIPFSA-------IHATLPR- 193
Query: 196 SLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQR 255
G+ L L + HE RV+AAYRR Y + +PFWF+SKFGP E +LV RYYLL+A
Sbjct: 194 --GRPALEGLMLQHESRVIAAYRRLYNSNFSNPFWFVSKFGPSEITLVAAMRYYLLEATP 251
Query: 256 LGGAGATYDLQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYARGAAAAGF 315
G T+DLQA+KD+C T+ ++ ++ A LTSF+A ++F C+S YA +A F
Sbjct: 252 DDGIAGTFDLQAVKDLCITFQTENSNNRSNLTIARLTSFSAFSKFWCSSYYATRESAKLF 311
Query: 316 PLYVERRIAADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATHLRAV 375
++ R +AD + LE I R LR+ R+FI+++YLA+ E + + HL+ +
Sbjct: 312 RDHLRLRTSADRGYSEQLEALICKYRHALRLPARDFISFVYLAYSEGYGRNVIREHLQCL 371
Query: 376 TTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTAKAYLR 435
+ + NP S+ + A FF +R N Y + +VT + L A +
Sbjct: 372 SENLTNPVKSSAR-------AQSDFFKSLRECCNFASYFRQHVTMQVMKLPAVVAGKFAA 424
Query: 436 ARTYAPGALTPAPAYCGAVDSATKMMGRL---------ADAEKLLV-------------- 472
++Y +C + + + RL A +LV
Sbjct: 425 IKSYGEIQGRNFLGFCRSAFDVSTRIDRLYSDTLCRYGAHLADMLVRNVSTVSSNEQEEE 484
Query: 473 -----PRGWPAFAPASPGEDTAGGTPPPQTCGIV----KRLLRLAATEQQ--GPTPPAI- 520
G A AP + + +T I+ RLL L +++Q G P +
Sbjct: 485 EEEEEEEGDDASAPHALAQKRERDGQYCKTGDIIFAPLSRLLSLVSSDQVICGKRPVTLL 544
Query: 521 ------AALIRNAAVQTPLPVYRISMVPTGQAFAALAWDDWARITR-------------- 560
++ A P PVYR+++ GQAFAA+A D+W I
Sbjct: 545 FHSLKPTSIPPPTARNGPCPVYRVTLAGHGQAFAAIASDEWDSIITADVRSDTSIHDSCL 604
Query: 561 ----DARLAEA----VVSAEAAAHPDHGALGRRLTDRIRAQGPVMPPGGLDAGGQMYVNR 612
DA LA+ V+ + + A G ++IRA GL QMY+NR
Sbjct: 605 LMRSDAPLADQAMLPVIDFAWTSAMNETAWGTSSKNKIRASC-----SGLS---QMYLNR 656
Query: 613 NEIFNGALAITNIILDLDIALK---EPVPFRRLHEALGHFRRGALAAVQLLFPAARVDPD 669
NE+ N +LAI ++ILD+DI LK P+ LH+A+ R + + LLFP + D
Sbjct: 657 NEVLNESLAIQSLILDIDIPLKLDHGPITMLTLHKAMRAVRVALIQLIALLFPETSISHD 716
Query: 670 AYPCYFFKSACRPGPASVGSGSGLGNDDDGDWFPCYDDAGDEE--------WAEDPGAMD 721
YP YF+KS C + S + D D C DD DEE W E+ D
Sbjct: 717 TYPVYFYKSHCSSPESHDAQYSSV--DIDFLENTCSDDIEDEENMYLCDSGWVEEMSWCD 774
Query: 722 TSHDPPDDEVAYFDLCHEVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMR 781
V+ DL + + +S +C C +K+G RVC+P+P+PY + G T++
Sbjct: 775 EHASEHGAIVSVQDLQDALNVFRD--RANSTLCKCKEKLGFRVCVPIPSPYALFGLETVK 832
Query: 782 GVARVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRLL 841
+A++ Q +LL + +E + ++++ IDTG+Y+ G SLRLP+FAK++ G GRLL
Sbjct: 833 TIAKLAQHVILLQEEIIECLDDVIRDYDFIDTGIYSPGRSLRLPFFAKVSESGFMSGRLL 892
Query: 842 PVFVIPPACKDVPAFVAAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYVSFFERKASR 901
P + PP C D AF AAH DP FHFHA +P I + D + + +S
Sbjct: 893 PFIIFPPDCADKVAFAAAHKDPNNFHFHAFRPDNPTPNIIVTRIACPPDVIGGVSKPSSN 952
Query: 902 NALEHFGRRETLTEVLGRYNVQP--DAGG----TVEG---FASELLGRIVACIETHFPEH 952
L +L E R N+ P D G T++G + +L I I+ HFP
Sbjct: 953 --LPQTAVSLSLAEAFSRVNLAPCEDRTGAGVDTIDGVFVLTTYVLPAITNYIKEHFPSL 1010
Query: 953 AGEYQAVSVRRAVSKDDWVLLQLVPVRGTL--QQSLSCLRFKHGRASRATARTFVALSVG 1010
A EY +S + L+ R + + +CL+ H A+ T T VA+++
Sbjct: 1011 AHEYSDISFGDVRVLKTRITASLLRNRRGCGGRATFTCLKHSHRSAAAQTVITSVAVAIN 1070
Query: 1011 ANNRLCVSLCQQCFAAKCDSNRLHTLFTIDAGTPC 1045
+ + +CFA KC N L T FT+ C
Sbjct: 1071 SQGNPYAAFQTKCFATKCGGNTLQTQFTVRLTKEC 1105
>gi|11878253|gb|AAG40868.1|AF310619_1 UL52 [Pseudorabies virus Ea]
Length = 312
Score = 276 bits (705), Expect = 2e-72
Identities = 154/322 (47%), Positives = 197/322 (60%), Gaps = 27/322 (8%)
Query: 739 EVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFV 798
E GP P + P C C K+G RVC PVP+PY V G+ T+RG+ARV+QQAVLL+RDF+
Sbjct: 14 EPGPARAPAADERPACGCRAKMGFRVCTPVPSPYAVAGADTVRGLARVLQQAVLLERDFI 73
Query: 799 EAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPAC-GRLLPVFVIPPACKDVPAFV 857
E +G Y+++F +DTGVYAHG SLRLP+FAK+ DG C GRLLP PP
Sbjct: 74 EPMGPYLQDFTFVDTGVYAHGRSLRLPFFAKV--DGGGCHGRLLPFGDAPP--------- 122
Query: 858 AAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYVSFFERKASRNALEHFGRRETLTEVL 917
DPR FHFHA P + + RVLHSLGG+Y SFFERKA+RN F RR L ++L
Sbjct: 123 -GFDDPRNFHFHARPAHAVT----RVLHSLGGEYESFFERKAARNREAFFARRTPLADML 177
Query: 918 GRYNVQPDAGGTVEGFASEL-LGRIVACIETHFPEHAGEYQAVSVRRAVSKDDWVLLQLV 976
V + +E F +++ + ++ ++ HF A EY + +R V+K DWVL QL
Sbjct: 178 RGLAVDAEDRRALEAFVADVAMAPVLRHLDAHFNGRAHEYAGATAQRVVAKPDWVLFQLC 237
Query: 977 -PVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHT 1035
P R SCLR +H R+ ARTFVALSV A++RLC+SL QQCFA KC SN T
Sbjct: 238 GPAR------FSCLRARHARS--PPARTFVALSVDAHDRLCISLSQQCFATKCGSNATRT 289
Query: 1036 LFTIDAGTPCSPSVPCSTSQPS 1057
+FT + G CS + TS S
Sbjct: 290 IFTAEVGQSCSSADARCTSSSS 311
>gi|1857421|gb|AAB48438.1| DNA helicase-primase complex [Gallid
herpesvirus 1]
Length = 494
Score = 210 bits (534), Expect = 1e-52
Identities = 140/427 (32%), Positives = 208/427 (47%), Gaps = 28/427 (6%)
Query: 607 QMYVNRNEIFNGALAITNIILDLDIALK---EPVPFRRLHEALGHFRRGALAAVQLLFPA 663
QMY+NRNE+ N +LAI ++ILD+DI LK P+ LH+A+ R + + LLFP
Sbjct: 59 QMYLNRNEVLNESLAIQSLILDIDIPLKLDHGPITMLTLHKAMRAVRVALIQLIALLFPE 118
Query: 664 ARVDPDAYPCYFFKSACRPGPASVGSGSGLGNDDDGDWFPCYDDAGDEE--------WAE 715
+ D YP YF+KS C + S + D D C DD EE W E
Sbjct: 119 TSISHDTYPVYFYKSHCSSPESHDAQYSSV--DIDFLENTCSDDIEAEENMYVCDSGWVE 176
Query: 716 DPGAMDTSHDPPDDEVAYFDLCHEVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVH 775
+ D V+ DL + + +S +C C +K+G RVC+P+P+PY +
Sbjct: 177 EMSWCDEHASEHGAIVSVQDLQDALNVFRD--RANSTLCKCKEKLGFRVCVPIPSPYALF 234
Query: 776 GSLTMRGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGP 835
G T++ +A V Q +LL +F+E + ++++ IDTG+Y+ G SLRLP+FAK++ G
Sbjct: 235 GLETVKTIANVAQHVILLQEEFIECLDDVIRDYDFIDTGIYSPGRSLRLPFFAKVSESGF 294
Query: 836 ACGRLLPVFVIPPACKDVPAFVAAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYVSFF 895
GRLLP + PP C D AF AAH DP FHFHA +P I + D +
Sbjct: 295 MSGRLLPFIIFPPDCADKVAFAAAHKDPNNFHFHAFRPDNPTPNIIVTRIACPPDVIGGV 354
Query: 896 ERKASRNALEHFGRRETLTEVLGRYNVQP--DAGG----TVEG---FASELLGRIVACIE 946
+ +S L +L E R N+ P D G T++G + +L I I+
Sbjct: 355 SKPSSN--LPQTAVSLSLVEAFSRVNLAPCEDRTGAGVDTIDGVFVLTTYVLPAITNYIK 412
Query: 947 THFPEHAGEYQAVSVRRAVSKDDWVLLQLVPVRGTL--QQSLSCLRFKHGRASRATARTF 1004
HFP A EY +S + L+ R + + +CL+ H A+ T T
Sbjct: 413 EHFPSLAHEYSDISFGDVRVLKTRITASLLRNRRGCGGRATFTCLKHSHRSAAAQTVITS 472
Query: 1005 VALSVGA 1011
VA+++ +
Sbjct: 473 VAVAINS 479
>gi|11527594|dbj|BAB18673.1| DNA helicase-primase complex protein
[Marek's disease herpesvirus (STRAIN GA)]
Length = 220
Score = 198 bits (503), Expect = 5e-49
Identities = 102/223 (45%), Positives = 143/223 (63%), Gaps = 5/223 (2%)
Query: 748 ETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYVKN 807
+ D P C C DKIGLRVC+PVP+PY++ G+ T+ G++R+IQQAVLL+R+FVE IG Y+KN
Sbjct: 1 DPDKP-CGCHDKIGLRVCIPVPSPYLLVGTKTLAGLSRIIQQAVLLERNFVETIGPYLKN 59
Query: 808 FLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRLLPVFVIPPACKDVPAFVAAHADPRRFH 867
+ +ID+GVY HG SLRLP+F KI +G RL+PVFVIP C D+ F+ AH +P+ FH
Sbjct: 60 YEIIDSGVYGHGRSLRLPFFGKIDENGIVSRRLVPVFVIPDDCADMEKFIVAHFEPKNFH 119
Query: 868 FHAPPTYLASPREIRVLHSLGGDYVSFFERKASRNALEHFGRRETLTEVLGRYNVQPDAG 927
FH+ + + +L +GG+Y FFERK + N FG R +L+ L V +
Sbjct: 120 FHSS---IPLEKAAIILKDIGGEYAGFFERKITVNRDIFFGTRLSLSIALRERGVDINDC 176
Query: 928 GTVEGFASE-LLGRIVACIETHFPEHAGEYQAVSVRRAVSKDD 969
+ F ++ +L I+ + H P+HA EYQ +SV V K D
Sbjct: 177 AAITTFVTDHILDDIITYVYEHIPDHAIEYQNLSVSCCVVKSD 219
>gi|136965|sp|P17149|UL70_HCMVA HELICASE/PRIMASE COMPLEX PROTEIN
(PROBABLE DNA REPLICATION PROTEIN UL70)
gi|76585|pir||S09834 hypothetical protein UL70 - human
cytomegalovirus (strain AD169)
gi|1780848|emb|CAA35386.1| HCMVUL70 [Human herpesvirus 5]
Length = 1062
Score = 194 bits (494), Expect = 6e-48
Identities = 236/891 (26%), Positives = 347/891 (38%), Gaps = 111/891 (12%)
Query: 205 LYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYD 264
+Y HH + + + SP WF+S FG E ++LT YYL + Q +T +
Sbjct: 238 VYFHHAA--VLRHLNQVFLCPTSPSWFISVFGHTEGQVLLTMAYYLFEGQY--STISTVE 293
Query: 265 LQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIA 324
+ ++ C P + AS+ FA R S + + +A F Y R
Sbjct: 294 -EYVRSFCTRDLGTIIP-----THASMGEFA---RLLLGSPFRQRVSA--FVAYAVARNR 342
Query: 325 ADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATHLRAVTTH-DPNPA 383
D E ++ I R R+ D + Y+YLA+ + RL + R V D P
Sbjct: 343 RDYTELEQVDTQINAFRERARLPDTVCVHYVYLAYRTALARARLLEYRRVVAYDADAAPE 402
Query: 384 AS-TEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTAKAYLRARTYAPG 442
A T +P LGR + ++ ++ ++ V LD A +P
Sbjct: 403 AQCTREPGFLGRRLSTELLDVMQKYFSLDNFLHDYVETHLLRLDESPHSAT------SPH 456
Query: 443 ALTPAPAYCGAVDSA--TKMMGRLADAEKLLVPRGWPAFAPASPGEDTAGGTPPPQTCGI 500
L A Y G +D G + L + + SP E + G
Sbjct: 457 GLGLA-GYGGRIDGTHLAGFFGTSTQLARQLERINTLSESVFSPLERSLSG--------- 506
Query: 501 VKRLLRLAATEQQGPT-----------------PPAIAALIRNAAVQTPLPVYRISMVPT 543
LLRL A+ + T PA+A L+ + PLPVYR+ +
Sbjct: 507 ---LLRLCASLRTAQTYTTGTLTRYSQRRYLLPEPALAPLL-----ERPLPVYRVHLPND 558
Query: 544 GQAFAALAWDDWARITRDARLAEAVVSAEAAAHPDHGALGRRLTDRIRAQGPVMPPGGLD 603
F A+A + W R L V PD LT+ + + +
Sbjct: 559 QHVFCAVASETWHRSLFPRDLLRHV--------PDSRFSDEALTETVWLHDDDVASTSPE 610
Query: 604 AGGQMYVNRNEIFNGALAITNIILDLDIALKEPVPFRRLH---EALGHFRRGALAAVQLL 660
Q Y R+E+FN L + N + D D+ L++ V H E RR + L
Sbjct: 611 T--QFYYTRHEVFNERLPVFNFVADFDLRLRDGVSGLARHTVFELCRGLRRVWMTVWASL 668
Query: 661 FPAARVDPDAYPCYFFKSACRPGPASVGSGSGLGNDDDGDWFPCYDDAGDEEWAEDPGAM 720
F PD +P YFFKSAC P V + +DDD + Y D D E ED
Sbjct: 669 F--GYTHPDRHPVYFFKSACPPNSVPVDAAGAPFDDDD---YLDYRDERDTE--EDEDGK 721
Query: 721 DTSHDPPDDEVAYFDLCHEVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTM 780
+ ++ PD+ V T +T P C C K+GLR+ P PA V +
Sbjct: 722 EDKNNVPDNGVFQ--------KTTSSVDTSPPYCRCKGKLGLRIITPFPACTVAVHPSVL 773
Query: 781 RGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGP--ACG 838
R VA+V+ AV LD + + +DTG+Y HG S+RLPY K+ D
Sbjct: 774 RAVAQVLNHAVCLDAELHTLLDPISHPESSLDTGIYHHGRSVRLPYMYKMDQDDGYFMHR 833
Query: 839 RLLPVFVIPPACKDVP-AFVAAHADPRRFHFHAPPTYLAS------PREI-RVLHSLGGD 890
RLLP+F++P A ++ P FV A D R H PP L + PR I V +
Sbjct: 834 RLLPLFIVPDAYREHPLGFVRAQLDLRNLLHHHPPHDLPALPLSPPPRVILSVRDKICPS 893
Query: 891 YVSFFERKASRNALEHFGRRETLTEVLGRYNVQPDAGGTVEGFASELLGRIVAC-IETHF 949
+ F S N + RR LTEVL Y++ G T + L R+V +
Sbjct: 894 TEANFIETRSLNVTRY--RRRGLTEVLA-YHLYGGDGATAAAISDTDLQRLVVTRVWPPL 950
Query: 950 PEHAGEYQAVSVRRAVSKDDWVLLQ-----LVPVR---GTLQQSLSCLRFKHGRASRATA 1001
EH ++ V + +L Q V V+ G + CL + H R + T
Sbjct: 951 LEHLTQHYEPHVSEQFTAPHVLLFQPHGACCVAVKRRDGARTRDFRCLNYTH-RNPQETV 1009
Query: 1002 RTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHTLFTIDAGTPCSPSVPCS 1052
+ F+ L + L SL +CF KC SN + +I P +P P +
Sbjct: 1010 QVFIDLRTEHSYALWASLWSRCFTKKCHSNAKNVHISIKIRPPDAPVPPAT 1060
>gi|28373251|ref|NP_783788.1| UL70 [Human herpesvirus 5]
gi|27808796|tpg|DAA00166.1| TPA: UL70 [Human herpesvirus 5]
Length = 946
Score = 194 bits (494), Expect = 6e-48
Identities = 236/891 (26%), Positives = 347/891 (38%), Gaps = 111/891 (12%)
Query: 205 LYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYD 264
+Y HH + + + SP WF+S FG E ++LT YYL + Q +T +
Sbjct: 122 VYFHHAA--VLRHLNQVFLCPTSPSWFISVFGHTEGQVLLTMAYYLFEGQY--STISTVE 177
Query: 265 LQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIA 324
+ ++ C P + AS+ FA R S + + +A F Y R
Sbjct: 178 -EYVRSFCTRDLGTIIP-----THASMGEFA---RLLLGSPFRQRVSA--FVAYAVARNR 226
Query: 325 ADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATHLRAVTTH-DPNPA 383
D E ++ I R R+ D + Y+YLA+ + RL + R V D P
Sbjct: 227 RDYTELEQVDTQINAFRERARLPDTVCVHYVYLAYRTALARARLLEYRRVVAYDADAAPE 286
Query: 384 AS-TEQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTAKAYLRARTYAPG 442
A T +P LGR + ++ ++ ++ V LD A +P
Sbjct: 287 AQCTREPGFLGRRLSTELLDVMQKYFSLDNFLHDYVETHLLRLDESPHSAT------SPH 340
Query: 443 ALTPAPAYCGAVDSA--TKMMGRLADAEKLLVPRGWPAFAPASPGEDTAGGTPPPQTCGI 500
L A Y G +D G + L + + SP E + G
Sbjct: 341 GLGLA-GYGGRIDGTHLAGFFGTSTQLARQLERINTLSESVFSPLERSLSG--------- 390
Query: 501 VKRLLRLAATEQQGPT-----------------PPAIAALIRNAAVQTPLPVYRISMVPT 543
LLRL A+ + T PA+A L+ + PLPVYR+ +
Sbjct: 391 ---LLRLCASLRTAQTYTTGTLTRYSQRRYLLPEPALAPLL-----ERPLPVYRVHLPND 442
Query: 544 GQAFAALAWDDWARITRDARLAEAVVSAEAAAHPDHGALGRRLTDRIRAQGPVMPPGGLD 603
F A+A + W R L V PD LT+ + + +
Sbjct: 443 QHVFCAVASETWHRSLFPRDLLRHV--------PDSRFSDEALTETVWLHDDDVASTSPE 494
Query: 604 AGGQMYVNRNEIFNGALAITNIILDLDIALKEPVPFRRLH---EALGHFRRGALAAVQLL 660
Q Y R+E+FN L + N + D D+ L++ V H E RR + L
Sbjct: 495 T--QFYYTRHEVFNERLPVFNFVADFDLRLRDGVSGLARHTVFELCRGLRRVWMTVWASL 552
Query: 661 FPAARVDPDAYPCYFFKSACRPGPASVGSGSGLGNDDDGDWFPCYDDAGDEEWAEDPGAM 720
F PD +P YFFKSAC P V + +DDD + Y D D E ED
Sbjct: 553 F--GYTHPDRHPVYFFKSACPPNSVPVDAAGAPFDDDD---YLDYRDERDTE--EDEDGK 605
Query: 721 DTSHDPPDDEVAYFDLCHEVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTM 780
+ ++ PD+ V T +T P C C K+GLR+ P PA V +
Sbjct: 606 EDKNNVPDNGVFQ--------KTTSSVDTSPPYCRCKGKLGLRIITPFPACTVAVHPSVL 657
Query: 781 RGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGP--ACG 838
R VA+V+ AV LD + + +DTG+Y HG S+RLPY K+ D
Sbjct: 658 RAVAQVLNHAVCLDAELHTLLDPISHPESSLDTGIYHHGRSVRLPYMYKMDQDDGYFMHR 717
Query: 839 RLLPVFVIPPACKDVP-AFVAAHADPRRFHFHAPPTYLAS------PREI-RVLHSLGGD 890
RLLP+F++P A ++ P FV A D R H PP L + PR I V +
Sbjct: 718 RLLPLFIVPDAYREHPLGFVRAQLDLRNLLHHHPPHDLPALPLSPPPRVILSVRDKICPS 777
Query: 891 YVSFFERKASRNALEHFGRRETLTEVLGRYNVQPDAGGTVEGFASELLGRIVAC-IETHF 949
+ F S N + RR LTEVL Y++ G T + L R+V +
Sbjct: 778 TEANFIETRSLNVTRY--RRRGLTEVLA-YHLYGGDGATAAAISDTDLQRLVVTRVWPPL 834
Query: 950 PEHAGEYQAVSVRRAVSKDDWVLLQ-----LVPVR---GTLQQSLSCLRFKHGRASRATA 1001
EH ++ V + +L Q V V+ G + CL + H R + T
Sbjct: 835 LEHLTQHYEPHVSEQFTAPHVLLFQPHGACCVAVKRRDGARTRDFRCLNYTH-RNPQETV 893
Query: 1002 RTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHTLFTIDAGTPCSPSVPCS 1052
+ F+ L + L SL +CF KC SN + +I P +P P +
Sbjct: 894 QVFIDLRTEHSYALWASLWSRCFTKKCHSNAKNVHISIKIRPPDAPVPPAT 944
>gi|14251058|ref|NP_116420.1| T70 [Tupaia herpesvirus]
gi|14210752|gb|AAK57115.1| T70 [Tupaia herpesvirus]
Length = 970
Score = 182 bits (463), Expect = 2e-44
Identities = 217/807 (26%), Positives = 305/807 (36%), Gaps = 154/807 (19%)
Query: 109 RTRPMFVCRFERADDVAALQDALAHGTPLQPDHIAATLDAEATFALHANMILALTVAINN 168
R +F C ER D L L+ G P+ ++ TLD T L+ +
Sbjct: 56 RVGRVFSCVAERLD----LTAYLSQGRPIAAQSLSDTLDEAQTRPLYEPLF--------- 102
Query: 169 ASPRTGRDAAAAQYDQGASLRSLVGRTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSP 228
+T AAAA GA + T V+ + + + + SP
Sbjct: 103 --DKTKGPAAAAA--TGAETTTPPVATEFHH------LVYFNRHAILRHLNHTFLAPTSP 152
Query: 229 FWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYDLQAIKDICATYAIPHAPRPDTVSA 288
WFL FG E L+LT YYL + Q +Q +D + P VS
Sbjct: 153 SWFLGVFGQTEGLLLLTMSYYLFERQYS-------TIQTTRDYARCFL--EQLGPPLVSY 203
Query: 289 ASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIAADVRETSALEKFITHDRSCLRVSD 348
SL F R +S + A A F Y R D E ++ I R R D
Sbjct: 204 ISLLDFM---RTLVSSPFR--AHLARFARYARERNRRDHAEWRQVDAEIDKFREESRWPD 258
Query: 349 REFITYIYLAHFECFSPPRLATHLRAVTTHDPN--------------PAAST------EQ 388
++ YIYLA+ +P RL + V +DP A T +
Sbjct: 259 STYVHYIYLAYRTALAPERLLAYCELVA-YDPRLGDEEAEEDEDGDEEAGETTRRQCRRE 317
Query: 389 PSPLGREA-------VEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTAKAYLRARTYAP 441
P L R+ +E++F Q EYV+H + + DG A Y T
Sbjct: 318 PRYLARQLATTLISILERYFS---PQHFFREYVEH-----QRLADGVEALGY----TGYA 365
Query: 442 GALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGWPAFAPASPGE-DTAGGTPPPQTCGI 500
A+ A + GAV + + L LV + P+ G + G+
Sbjct: 366 WAVDDASPHTGAVFLTHQTLPPLLTRVNELVEGVFSPVEPSLSGLLSLCASNKRVRAQGL 425
Query: 501 VKRLLRLAATEQQGPTPPAIAALIRNAAVQTPLPVYRISMVPTGQAFAALAWDDWARITR 560
+R LAA + P AA V PLPV+R+ + F A A D W R
Sbjct: 426 TRRDYLLAAAQ----VAPGGAAAGGRRPVGGPLPVFRVELAHHRHVFCAAARDAWHRRLF 481
Query: 561 DARLAEAVVSAEAAAHPDHGALGRRLTDRIRAQGPVMPPGGLDAGGQMYVNRNEIFNGAL 620
A AV P HG LTD + + G D Q+Y R+E+FN L
Sbjct: 482 PADPFRAV--------PTHGLTDENLTDGLCLPAEHLATG--DPQTQLYRTRHEVFNAQL 531
Query: 621 AITNIILDLDIALKEPVPFRR--LHEALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKS 678
+ N+ LD+D+AL++ V R L + H RR L A + LFP D YP YFFKS
Sbjct: 532 PVFNLALDVDLALRDGVRATRSDLFDLCRHLRRVLLHARRELFPEGGADAXTYPVYFFKS 591
Query: 679 ACRPGPASVGSGSGLGNDDDGDWFPCYDDAGDEEWAEDPGAMDTSHDPPDDEVAYFDLCH 738
AC PA++ +DP +D
Sbjct: 592 ACPDPPAAL---------------------------DDPRPLDP---------------- 608
Query: 739 EVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFV 798
ETD C+C K+G RV +P+P+ V+ +R + R++ V+LDR
Sbjct: 609 ---------ETD--FCACRAKLGFRVILPLPSGLVIVRPRIVRTLVRILNHLVMLDRPLT 657
Query: 799 EAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPAC--GRLLPVFVIPP----ACKD 852
+ + D G+Y HG S+RLP+ K+ PD GRLLP+FV+PP D
Sbjct: 658 AHLNRLTQPGDCFDVGIYHHGRSIRLPFMYKVDPDSGCLLYGRLLPLFVVPPGRARTTDD 717
Query: 853 VPAFVAAHADPRRFHFHAPPTYLASPR 879
AF D R H+PP A+ R
Sbjct: 718 ALAFARQQLDLRNLLHHSPPVGQAAVR 744
>gi|20026661|ref|NP_612703.1| DNA helicase-primase complex protein
UL70 [Chimpanzee cytomegalovirus]
gi|19881089|gb|AAM00709.1|AF480884_61 DNA helicase-primase complex
protein UL70 [chimpanzee cytomegalovirus]
Length = 984
Score = 178 bits (451), Expect = 5e-43
Identities = 254/1037 (24%), Positives = 400/1037 (38%), Gaps = 166/1037 (16%)
Query: 88 SFRVTFCLLGTEVGGTHQARGRTRPMFVCRFERADDVAALQDALAHGTPLQPDHIAATLD 147
S RV FCL + + R P+F +DV L L P+ + A+LD
Sbjct: 39 SRRVYFCLQTQKCTDSR----RVAPVFAVD----NDVLNLSRYLTARQPIPLSALIASLD 90
Query: 148 AEATFALHANMILALTVAINNASPRTGRDAAAAQYDQGASLRSLVGRTSLGQRGLTTLYV 207
T L++++ + SP G + ++ +Y
Sbjct: 91 EAETRPLYSHLFRTVI------SPEHGGEVREFKH---------------------LVYF 123
Query: 208 HHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYDLQA 267
HH + + + SP WF+S FG E ++L+ YYL + Q T + +
Sbjct: 124 HHAA--VLRHLNLVFLCPTSPSWFISTFGHTEGQVLLSMAYYLFEGQY--STVPTVE-EY 178
Query: 268 IKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIAADV 327
++ CA P P + AS++ FA R S + + F Y R D+
Sbjct: 179 VRSFCAGDLGPVIP-----THASMSEFA---RLLLGSPFRQRVPQ--FVAYAVARNRRDL 228
Query: 328 RETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATHLRAVTTHDPNPAAS-- 385
E + ++ I R R+ D + Y+YLA+ + RL + R V + PA
Sbjct: 229 AELTHVDAQINTFREHARLPDTVCVHYVYLAYRTALARQRLLEYRRVVAYDETAPAEQQC 288
Query: 386 TEQPSPLGR-------EAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTAK------- 431
T +P LGR + +E++F + +YV+ + P + A
Sbjct: 289 TREPLFLGRRLAGDLIQVMERYFS---LDNFLHDYVETRLLPLGSPHQPHPASYPPPSHP 345
Query: 432 ------------AYLRARTYAPGALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGWPAF 479
+LR Y G T + G ++++++ +L +L
Sbjct: 346 QQQPSPAHPPCLQHLRMSGY--GYRTDGASLTGFFGTSSQLLRKLDQINRL--------- 394
Query: 480 APASPGEDTAGGTPPPQTCGIVKRL--LRLAATEQQGPT----------PPAIAALIRNA 527
D+ + G+++ LR A T G PP +AA A
Sbjct: 395 ------SDSVFSSIERSLSGVLRLCASLRTAQTYATGALARFSQRRYLLPPELAAA--GA 446
Query: 528 AVQTPLPVYRISMVPTGQAFAALAWDDWARITRDARLAEAVVSAEAAAHPDHGALGRRLT 587
+ PLP+YR+ + F A+ + W R L + V PD LT
Sbjct: 447 VIAQPLPLYRVHLPNDQHVFCAVFSETWHRSMFPFDLLKHV--------PDSRFTDEALT 498
Query: 588 DRIRAQGPVMPPGGLDAGGQMYVNRNEIFNGALAITNIILDLDIALKEPVPFRRLH---E 644
D I + + Q Y R+EIFN L + N + D+D+ L++ V H E
Sbjct: 499 DMIWLHDDDVASASPET--QFYYTRHEIFNERLPVFNFVADMDLRLRDGVSGLSKHTVFE 556
Query: 645 ALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKSACRPGPASVGSGSGLGNDD------D 698
RR +A LF D +P YFFKSACR G G+ +DD D
Sbjct: 557 ICRGLRRVWIAVWTSLF--GYTYQDRHPVYFFKSACR----HPGVGAHAHDDDAADAYYD 610
Query: 699 GDWFPCYDDAGDE-EWAEDPGAMDTSHDPPD-DEVAYFDLCHEVGPTAEPRETDSPV-CS 755
GD + +++ E A + G M + E + E G A + +SP+ C
Sbjct: 611 GDEYLNFENEEHEGRDATEEGEMRREEEGQRVGESRHPKTKEEEGGDATGDKNNSPLYCR 670
Query: 756 CTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDTGV 815
CT+K+GLR+ P PA VV +R VA+V+ A+ LD + +DTG+
Sbjct: 671 CTEKLGLRIITPFPANTVVLNPAVLRAVAQVLNHALCLDTQLHRLLDPISHPENSLDTGI 730
Query: 816 YAHGHSLRLPYFAKIAPDGP--ACGRLLPVFVIPPACKDVP-AFVAAHADPRRFHFHAPP 872
Y HG S+RLPY K+ D RLLP+F++P A +D P FV A D R H PP
Sbjct: 731 YHHGRSVRLPYMYKMDQDDGYFMYRRLLPLFIVPEAYRDRPLGFVRAQLDLRNLLHHHPP 790
Query: 873 TYLAS------PR-EIRVLHSLGGDYVSFFERKASRNALEHFGRRETLTEVL-----GRY 920
L + PR + V + + F S N + +R L +VL G
Sbjct: 791 HDLPAFPISPPPRIVLSVQDKICPSPDANFIETRSLNVTRY--QRRALADVLSYHLYGAP 848
Query: 921 NVQPDAGGTVEGFASELLGRIVACIETHFPEHAGEYQAVSVRRAVSKDDWVLLQ-----L 975
+ V + +EL +V + EH + V + + +L Q
Sbjct: 849 RAERGDDDAVVVYETELQRLLVGRVWPPLLEHLTRHYEAHVSEQFTAPNVLLFQPHGLSC 908
Query: 976 VPVR---GTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNR 1032
V V+ G+ + CL + H R + T + F+ L + L SL +CF KC SN
Sbjct: 909 VAVKRRDGSRTRDFRCLNYVH-RNPQETVQVFIDLRTEHSYALWASLWSRCFTKKCHSNA 967
Query: 1033 LHTLFTIDAGTPCSPSV 1049
+ ++ P + +V
Sbjct: 968 KNVHISVKIRPPGADAV 984
>gi|9845352|ref|NP_064166.1| pR70 [Rat cytomegalovirus]
gi|9800282|gb|AAF99156.1|AF232689_52 pR70 [rat cytomegalovirus
Maastricht]
Length = 936
Score = 177 bits (448), Expect = 1e-42
Identities = 225/889 (25%), Positives = 327/889 (36%), Gaps = 170/889 (19%)
Query: 227 SPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYDLQAIKDICATYAIPHAPRPDTV 286
SP WFL+ +G E + +L+ YYL + Q +T +C T + P P P V
Sbjct: 144 SPSWFLNAYGGHEGTALLSMSYYLFERQL-----STIQTTRGYTLCYT-SDPGDPIPTHV 197
Query: 287 SAASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIAADVRETSALEKFITHDRSCLRV 346
+ + +RF F Y R A D RE ++ I R R+
Sbjct: 198 TMREFMTTLLRSRF--------RKEVERFARYARARNARDGREIDHVDAKIDEFREASRL 249
Query: 347 SDREFITYIYLAHFECFSPPRLATHLRAVTTHDPNPAASTE---QPSPLGREAVEQFFCH 403
I Y YLA+ S R+ + A T DP + + LGR +
Sbjct: 250 PADTAIYYAYLAYSTALSRERILQYC-ARTEFDPGLRDEDQCRRDENFLGRRLDDDLLRM 308
Query: 404 VRAQLNIGEYVKHNVTPRETVLDGDTAKAYLRARTYAPGALTPAPAYCGAVDSATKMMGR 463
++ + Y ++ V D A + P A + + G+ + + R
Sbjct: 309 MKEYFSPEAYFRNYVEVERLAAPPD---AGYEGYDWEPDAASGVRVFFGSSAAVLDEILR 365
Query: 464 LADAEKLLVPRGWPAFAPASPGEDTAGGTPPPQTCGIVKRLLRLAATEQQGPTPPAIA-- 521
L D + L P PQ + LLRL A+ + P A
Sbjct: 366 LNDKTEDLFD-------------------PVPQRT--LPGLLRLCASGRSIPLEDAATLR 404
Query: 522 -ALIRNAAVQT------PLPVYRISMVPTGQAFAALAWDDWARITRDARLAEAVVSAEAA 574
A RN + T PLP +R+ M F L+ D+W R L + A
Sbjct: 405 RATRRNYLMNTSRRAFGPLPAFRVEMPGPRSLFVCLSADEWLRRLVPPNLDRDLPRGHAL 464
Query: 575 AHPDHGALGRRLTDRIRAQGPVMPPGGLDAGGQMYVNRNEIFNGALAITNIILDLDIALK 634
+ D LT+ + + V Q+Y R+EIFN L + N + DLD+ L+
Sbjct: 465 SDED-------LTETLWPREEV--EARQKFWDQLYRTRHEIFNEHLPVFNFVGDLDLKLR 515
Query: 635 E-PVPF---RRLHEALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKSACRPGPASVGSG 690
+ P P R + L RR L A LFP +D DAYP YFFKSAC
Sbjct: 516 DRPAPGIRRRDFFDLLRDMRRALLDAWAQLFPDDAIDRDAYPVYFFKSAC---------- 565
Query: 691 SGLGNDDDGDWFPCYDDAGDEEWAEDPGAMDTSHDPPDDEVAYFDLCHEVGPTAEPRETD 750
+DPG + PD +
Sbjct: 566 ------------------------DDPGPDAAAAGAPDAVLG--------------GGGG 587
Query: 751 SPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYVKNFLL 810
+ C+C KIG+R+ +P+P V GS T++ +AR + A+ LDRD V + +
Sbjct: 588 AVFCTCRRKIGMRIVIPLPRGTVALGSTTVKRLARTLDHALCLDRDLVGRLNAVSNPGDC 647
Query: 811 IDTGVYAHGHSLRLPYFAKIAPDG-PACGRLLPVFVIPPACKDVP-AFVAAHADPRRFHF 868
DTGVY HG S+R+P K+ G C RL PV+V+PP + P FV AH P
Sbjct: 648 FDTGVYGHGRSVRMPLMYKLDASGYMLCRRLNPVYVVPPKLRAAPHDFVRAHFRPENLTH 707
Query: 869 HAPPTYLASPREIRVLH----SLGGDYVSFFERKASRN-------------ALEHFGRRE 911
H P + ++H + G + VSF ++ +R+ L RRE
Sbjct: 708 HGNPHGGDARVSATIVHIADRACGEEDVSFTQKYINRDERRPQTPLLPTIRQLLAATRRE 767
Query: 912 -----TLTEVLGRYNVQPDAGGT-----------------------------VEGFASEL 937
TL R D G +E FA E+
Sbjct: 768 ASPGPTLPPPRARTGDGDDGGAAAAAAGPDDLDDGDDDPTDAGPPDPEEARDLETFAREV 827
Query: 938 L-GRIVACIETHF-PEHAGEYQAVSVRRAVSKDDWVLLQLVPVRGTLQQSLSCLRFKHGR 995
R++ H+ PE + +A V RAV +D LL + G + CL +H
Sbjct: 828 AWPRVLELARGHYRPEAQAQLEAADVFRAVRRD---LLAVKRDDGGRGRDFRCLTTEHHF 884
Query: 996 ASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHTLFTIDAGTP 1044
R T F+ L + +L +CFA KC SN T T+ P
Sbjct: 885 RWRETVNVFLDLRADRGGNVWATLWSRCFANKCQSNARRTHLTVKISPP 933
>gi|3024793|sp|Q69153|UL70_MCMVS HELICASE/PRIMASE COMPLEX PROTEIN
(PROBABLE DNA REPLICATION PROTEIN UL70)
gi|291528|gb|AAA96665.1| helicase/primase
Length = 964
Score = 160 bits (405), Expect = 1e-37
Identities = 236/1018 (23%), Positives = 377/1018 (36%), Gaps = 194/1018 (19%)
Query: 109 RTRPMFVCRFERADDVAALQDALAHGTPLQPDHIAATLDAEATFALHANMILALTVAINN 168
R RP+F+C R +L + ++ TPL I A +DA+AT L+ ++ +
Sbjct: 56 RVRPVFICDARRL----SLSEYVSTNTPLPARVICAGIDADATRELYEHLF-------DR 104
Query: 169 ASPRTGRDAAAAQYDQGASLRSLVGRTSLGQRGLTTLYVHHEVRVLAAYRRAYYGSAQSP 228
TG D + G++ R L + + L VH+ + Y + S P
Sbjct: 105 KKDETGHDE-----ENGSAARHLFSNLTSTLKCL----VHYNRSAILRYLNNTFLSPTFP 155
Query: 229 FWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYD-LQAIKDICATYAIPHAPRPDTVS 287
WFLS +G E +L+LT YYL + TY +Q +D +
Sbjct: 156 SWFLSTYGTHEGTLILTMSYYLFER--------TYSTIQTTRDYTKCFTAD--------P 199
Query: 288 AASLTSFAAITRFCCTSQYAR-GAAAAGFPLYVERRIAADVRETSALEKFITHDRSCLRV 346
+L ++ + F T +R F ++ + R A D E ++ I R R+
Sbjct: 200 GRNLFTYINMRDFMATMNGSRFRKQTVLFAVFAKARNARDRCELEYVDAKINAFREESRL 259
Query: 347 SDREFITYIYLAHFECFSPPRLATHLRAVTTHD---PNPAASTEQPSPLGREAVEQFFCH 403
+ + Y+YLA+ + + T +D P+ + + LGR +
Sbjct: 260 AADSCVYYVYLAYRTALCREKFLQYCEH-TAYDKNLPDDQQCAAEENYLGRSLDAELISI 318
Query: 404 VRAQLNI----GEYVK---------HNVTPRETVLDGDTAKAYLRARTYAPGALTPAPAY 450
+ ++ G Y+ H+ + + DT Y T +L +
Sbjct: 319 MNTYFSVEGYFGSYIHVDRAKLSPPHSYRGYDWNTEADTMVGYSSTATNLAISLRKLNST 378
Query: 451 CGAVDSATK--MMGRLA-DAEKLLVPRGWPAFAPASPGEDTAGGTPPPQTCGIVKRLLRL 507
C ++ S +MG L A VPR + T+GG + +R L
Sbjct: 379 CESLFSPLPPTLMGLLKLCASDRYVPRA------EKSRKRTSGGREKEDETRVCRRNYLL 432
Query: 508 AATEQQGPTPPAIAALIRNAAVQTPLPVYRISMVPTGQAFAALAWDDWARITRDARLAEA 567
T + P+PV+R+ M F A++ ++W R L +
Sbjct: 433 NDTSRP----------------IGPMPVFRVEMPEKRHVFCAVSAENWTRRLLPKDLMKN 476
Query: 568 VVSAEAAAHPDHGALGRRLTDRIRAQGPVMPPGGLDAGGQMYVNRNEIFNGALAITNIIL 627
+ P LTD + + + + G Q+Y R+E+FN L + N +
Sbjct: 477 L--------PSEYVSDECLTDAVWLREDIAAL--CEVGEQLYRTRHEMFNENLPVFNFVG 526
Query: 628 DLDIALKEPVPFRRLHEALG---HFRRGALAAVQLLFPAARVDPDAYPCYFFKSACRPGP 684
D+D+ L+E + E RR + A + LFP VDPD++P +FFKSAC
Sbjct: 527 DVDLKLREDLQGLSRQEVFDLCRALRRTLIGAWRHLFP--EVDPDSHPVFFFKSACPQNA 584
Query: 685 ASVGSGSGLGNDDDGDWFPCYDDAGDEEWAEDPGAMDTSHDP-PDDEVAYFDLCHEVGPT 743
A A DE G D DP P+ A D V
Sbjct: 585 AG---------------------AADEAMLYGGGGYDEDDDPRPEHAAAMVDYGDAV--- 620
Query: 744 AEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGS 803
P C C K+GLRV +P P G+ T++ +A ++ + LDRD V + +
Sbjct: 621 -----RRPPFCVCRRKLGLRVIIPFPPRTAAIGAQTLKRLAGILDHTLCLDRDLVCKLNA 675
Query: 804 YVKNFLLIDTGVYAHGHSLRLPYFAKI--APDGPACGRLLPVFVIPPACKDVPA-FVAAH 860
DTG+Y+HG S+R+P K+ A RL P+F++P +D PA FV
Sbjct: 676 ISHPGECFDTGIYSHGRSIRMPLMYKLDEASGLILHSRLNPIFIVPAGYRDRPAEFVLQQ 735
Query: 861 ADPRRFHFHA-PPTYLASPREIR--VLH-------SLGGDYVSFFERKASRN-------- 902
P+ H PP S ++ VLH G+++ R+A +
Sbjct: 736 LCPQNLTHHGRPPQRDGSADQLTEVVLHITDRACADSDGNFLQSRARRAMSSGRLPLGPL 795
Query: 903 -----ALEHFGRRETLTEVLGRYNVQPDAGGTVEGFASELL--GRIVACIETHFPEHAGE 955
+LE +L ++GR GG EG AS R V E +
Sbjct: 796 LRAHLSLESGQSAPSLPTLVGR-------GGGGEGGASSDYEEERAVGSDEEEDDDDVEN 848
Query: 956 YQAVSVRRAVSKDDWVLL---QLVPVRGTLQQSL-----------SCLRFKHGRASRA-- 999
QA + R A W L R +QQ L +C+ K G RA
Sbjct: 849 LQAFARRIA-----WPALLRHTRNHYREEVQQQLEAATVFTAVGRTCVAVKRGLYGRARD 903
Query: 1000 -------------TARTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHTLFTIDAGTP 1044
T + F+ + + +L +CF +C+SN T ++ P
Sbjct: 904 FSCLARETYTRQETVQVFLDIRGDQRRNVWATLWSRCFTRRCNSNAKQTHLSLKISLP 961
>gi|9628059|ref|NP_042653.1| DNA helicase-primase complex component
[Equine herpesvirus 2]
gi|1360772|pir||S55651 DNA helicase-primase complex component -
equine herpesvirus 2
gi|695229|gb|AAC13844.1| DNA helicase-primase complex component
Length = 884
Score = 146 bits (369), Expect = 2e-33
Identities = 228/1022 (22%), Positives = 380/1022 (36%), Gaps = 213/1022 (20%)
Query: 67 EQDRFEESRALYQASGGL---------NGDSFRVTFCLLGT----EVGG----------T 103
++D E RAL G N DS V FCL +GG
Sbjct: 18 QRDPLPEYRALCGTDGDAAEILTDVLTNTDSDGVVFCLAHNCYSYNIGGGEALLTLCLPA 77
Query: 104 HQARGRTRPMFVCRFERADDVAALQDALAHGTPLQPDHIAATLDAEATFALHANMILALT 163
+ G + + V +F D + Q+ L G P+ +I L+ A ++ LT
Sbjct: 78 KRPWGAEKCLPVIQFRC--DASRAQEFLFQGRPIPVRYIQTNLNHRAVKKFFKPILSVLT 135
Query: 164 VAINNASPRTGRDAAAAQYDQGASLRSLVGRTSLGQRGLTTLYVHHEVRVLAAYRRAYYG 223
S + G A D L + + +AA R+ +
Sbjct: 136 -----CSDKKGGGGEGAHAD------------------LKSTIFWFRAKFVAAVRKTFKI 172
Query: 224 SAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYDLQAIKDICATYAIPHAPRP 283
+A SPFW +S FG E VL + Y + C + H R
Sbjct: 173 TA-SPFWMISTFGCTEAQFVLVSSCYFFERHE----------------CTIDTLSHLSRL 215
Query: 284 DTVSAA----SLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIAADVRETSALEKFITH 339
S ++ +F+ + TS + F YV +++A D E++A+++ +
Sbjct: 216 FDGSRGRQLTTVNTFSDLAGMFGTSAWL--GRVPEFSAYVGKKLARDDLESAAVDEAVNA 273
Query: 340 DRSCLRVSDREFITYIYLAHFECFSPPRLATHLRAVTTHDPNPAASTEQPSPLGREAVEQ 399
R L +S+ + I YIYL+ F+C + + + H+ + E+P G E
Sbjct: 274 FRGQLMLSNADLIHYIYLSFFQCLNKEKFLEYSLRTNPHNID-GVPPEEPIITG-FIDEG 331
Query: 400 FFCHVRAQLNIGEYVKHNVTPRETVLDGDTAKAYLRARTYAPGALTPA-PAYCGAVDSAT 458
F + Y+K++V LDG Y+P A+ PA G A
Sbjct: 332 FKSKMATYYTKSSYLKNHVRVGSLYLDG--------VEGYSPEAIEAGPPAAAGGGGGAD 383
Query: 459 K-MMGRLADAEKLLVPRGWPAFAPASPGEDTAGGTPPPQTCGIVKRLLRLAATEQQGPTP 517
+ G+ D + LL D P + + LL LAA
Sbjct: 384 RYWAGQSRDVQGLL--------------SDILADHPASRLSPDLHGLLDLAALGDSS--- 426
Query: 518 PAIAALIRNAAVQTPL--PVYRISMVPTGQAFAALAWDDWARITRD--ARLAEAVVSAEA 573
+A ++++ PL PVYR + + F A+ +TRD AR E V
Sbjct: 427 -GVAGGVKDSLFPEPLRCPVYRCQYL--NKTFFAV-------VTRDNLARAWERAVQLPT 476
Query: 574 AAHPDHGALGRRLTDRIRAQGPVMPPGGLDAGGQMYVNRNEIFNGALAITNIILDLDIAL 633
G RLT + G L Q+ V+R+E FN L + N++LD D+ L
Sbjct: 477 QVTGWEGMEDARLTACVHYAELAFSLGHLRE--QLSVSRHEYFNPRLPVFNLVLDFDLPL 534
Query: 634 KEP-VPFRRLHEALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKSACRPGPASVGSGSG 692
K+P + R++ R L+ + +L VD A+P YFFKSAC P P
Sbjct: 535 KKPGLSLERVYSICRSVRSDVLSVLGVL---GEVDEAAHPVYFFKSAC-PRP-------- 582
Query: 693 LGNDDDGDWFPCYDDAGDEEWAEDPGAMDTSHDPPDDEVAYFDLCHEVGPTAEPRETDSP 752
+W DE +A P
Sbjct: 583 -------EW--------DEPYA-----------------------------------GRP 592
Query: 753 VCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDR-DFVEAIGSYVKNFLLI 811
C+C K+GLR+ P+P + G + +A+++ + + ++R D +E +
Sbjct: 593 FCTCDAKLGLRIITPLPRGVAIVGGAPLVALAKILNRMIKMNREDLLEICPGLPDADGPL 652
Query: 812 DTGVYAHGHSLRLPYFAKIAPDGPACG--RLLPVFVIPPACKDVPAFVAAHADPRRFHFH 869
DTG+Y G +RLP+ K+ ACG RLL +FV P D A++ R H
Sbjct: 653 DTGIYHRGRCVRLPHTYKV---NEACGLERLLRLFVCHPGSPDKAAYIRDAMTLRNLLHH 709
Query: 870 APPTYL----------ASPREIRVLHSLGGDYVSFFERKASRNALEHFGRRETLTEVLGR 919
+ Y +P++ +V++S+ +F + + + R ++ E +
Sbjct: 710 SKSAYWEGNAREGVSEEAPQKTKVVYSVTDVSENFLVCQTQQQLPRSYERPDSRIETM-- 767
Query: 920 YNVQPDAGGTVEGFASELL-GRIVACIETHFP-EHAGEYQAVSVRRAVSKDDWVLLQLVP 977
G + + +E+ ++ I+ + P + ++ V ++Q+ P
Sbjct: 768 ------TGRDLVTWVTEVAWPKVFHNIKAYIPDDKTTQFHFVKFIHTSHN----IIQVKP 817
Query: 978 VRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHTLF 1037
RG + C+ H R + R F+ L + + ++L QCFA KC+SN+ F
Sbjct: 818 QRG---NNFVCISSNH-RNKTQSVRIFIVLYTNKKDEVTITLMSQCFAHKCNSNKPRAHF 873
Query: 1038 TI 1039
+I
Sbjct: 874 SI 875
>gi|31377976|gb|AAP50626.1| rh100 [Rhesus cytomegalovirus strain 68-1]
Length = 950
Score = 146 bits (368), Expect = 2e-33
Identities = 205/897 (22%), Positives = 335/897 (36%), Gaps = 166/897 (18%)
Query: 205 LYVHHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYD 264
+Y HH + Y + SP WF+S FG E ++LT YYLL+ Q
Sbjct: 159 VYFHHSA--IVRYLNLIFLCPTSPSWFISVFGHTEGQVLLTMSYYLLERQYS-------T 209
Query: 265 LQAIKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIA 324
+ +++ +++ R V + + TR S + + F Y R
Sbjct: 210 IPTVEEYVRSFS-----RDLGVIIPTHATMTEFTRMLLGSPFR--SRIPQFVQYAMARNQ 262
Query: 325 ADVRETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATHLRAVTTHDPNPAA 384
D E +++ I R R+ D + YIYL++ S RL + R V +D
Sbjct: 263 RDYEELVHVDRQINTFREQARLPDTVCVHYIYLSYRTALSRSRLIKY-REVVAYDEGARE 321
Query: 385 ST--EQPSPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTAKAYLRARTYAPG 442
++P LGR + + ++ +++ + R +L D L ++
Sbjct: 322 EQCRQKPLFLGRHLADDLLSVMDKYFSLPNFLQDYIETR--ILSTDNYDLRLSGYSHQ-- 377
Query: 443 ALTPAPAYCGAVDSATKMMGRLADAEKLLVPRGWPAFAPASPGEDTAGGTPPPQTCGIVK 502
T PA G +++++M +L D + +P + G
Sbjct: 378 --TTGPALTGFFGTSSQVMRKL-DTINSMSDSVFPVLERSLSG----------------- 417
Query: 503 RLLRLAATEQQGPTPPAIAALIRNAAVQT----------PLPVYRISMVPTGQAFAALAW 552
LLRL A+ + T A +L + + Q P+P++R+ + F A+
Sbjct: 418 -LLRLCASLKTANTY-ATGSLAQYSQRQFLIPKETRFDGPIPLFRVQLPNDHHVFCAITC 475
Query: 553 DDWARITRDARLAEAVVSAEAAAHPDHGALGRRLTDRIRAQGPVMPPGGLDAGGQMYVNR 612
++W + + L + V PD LTD I + + Q Y R
Sbjct: 476 ENWHQNLFPSDLLKHV--------PDTEFTDEALTDMIWLHDDDVASSNAET--QFYYTR 525
Query: 613 NEIFNGALAITNIILDLDIALKEPVPFRR---LHEALGHFRRGALAAVQLLFPAARVDPD 669
+EIFN L N I D D+ L++ V L E RR + Q LF ++PD
Sbjct: 526 HEIFNERLPTYNFIADFDLRLRDGVTGLSKEVLFEICRGLRRVWVTVWQSLF--GNMNPD 583
Query: 670 AYPCYFFKSACRPGPASVGSGSGLGNDDDGDWFPCYDDAGDEEWAEDPGAMDTSHDPPDD 729
+P YFFKSAC+ P D + PP
Sbjct: 584 YHPVYFFKSACKN--------------------------------LTPDFYDDDNPPPS- 610
Query: 730 EVAYFDLCHEVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQ 789
ET + C C++K+GLR+ P P +V +R +A+V+
Sbjct: 611 -----------------YETRTDYCKCSEKLGLRIICPFPERTLVIRPSVLRSIAQVLNH 653
Query: 790 AVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGP--ACGRLLPVFVIP 847
A+ LD + + +DTG+Y HG S+RLP+ K+ + RLLP+F++P
Sbjct: 654 AICLDTLLHQHLDPISHPESSLDTGIYHHGRSVRLPFMYKMDQEDGYFMYRRLLPIFIVP 713
Query: 848 PACKDVP-AFVAAHADPRR-FHFHAPPTYLASPR---EIRVLHSLGGD---YVSF----- 894
++ P FV A D R H HAP SPR SL D +SF
Sbjct: 714 EGFREHPLGFVRAQLDIRNLLHHHAPHYPPGSPRPPVSYSSSSSLSPDDHPSMSFSCTRI 773
Query: 895 ---------------FERKASRNALEHFGRRETLTEVLGRYNVQPDAGGTVEGF-ASEL- 937
F S N + + TL++V+G Y+++ + G + AS+L
Sbjct: 774 ILGVRDKLCPSPDINFMETRSVNVTRY--EKRTLSDVIG-YHLRGEVSGRPDSDPASDLN 830
Query: 938 -LGRIVAC---------IETHFPEHAGEYQAVSVRRAVSKDDWVLLQLVPVRGTLQQSLS 987
L R+V + H+ E + + + G+ +
Sbjct: 831 DLQRLVVTRVWPLLLENLTQHYEPKVSEQFVPPHTLTFKPHSPHCVSVKRLEGSRTKDFR 890
Query: 988 CLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHTLFTIDAGTP 1044
CL + H R + T + F+ L + L SL +CF KC SN + ++ P
Sbjct: 891 CLNYTH-RNPQETVQVFIDLRTEHSYALWASLWSRCFTKKCHSNAKNVHISVKLRPP 946
>gi|1066180|emb|CAA62080.1| protein associated with a DNA helicase
/primase complex [Canine herpesvirus]
Length = 183
Score = 133 bits (334), Expect = 2e-29
Identities = 71/188 (37%), Positives = 100/188 (52%), Gaps = 5/188 (2%)
Query: 291 LTSFAAITRFCCTSQYARGAAAAGFPLYVERRIAADVRETSALEKFITHDRSCLRVSDRE 350
L SF+ +++FCC S YA G A Y+ RI AD+ E L +I+ DR L+VSDRE
Sbjct: 1 LISFSLLSKFCCQSGYATGKIAVKLEDYITHRINADISEVGVLRNYISADRQSLKVSDRE 60
Query: 351 FITYIYLAHFECFSPPRLATHLRAVTTHDPNPAASTEQPSPLGREAVEQFFCHVRAQLNI 410
FI YIYLAHFE F+ ++ HL +VT + N E S L + FF HVR QLNI
Sbjct: 61 FINYIYLAHFESFNRSQIYNHLNSVTISNINSINQIETASSLKSNTINNFFLHVRNQLNI 120
Query: 411 GEYVKHNVTPRETVLDGDTAKAYLRARTYAPGALTPAPAYCGAVDSATKMMGRLADAEKL 470
+Y+ NV P+ ++L + +++ +TY+ G + + L AEK
Sbjct: 121 HDYISKNVKPKISILSKNIQDKFVKTKTYSFNENN-----YGICECTNSFLNILEKAEKS 175
Query: 471 LVPRGWPA 478
L GWP+
Sbjct: 176 LSLHGWPS 183
>gi|18653862|ref|NP_570796.1| DNA replication protein [Macaca mulatta
rhadinovirus]
gi|4494960|gb|AAD21382.1| DNA replication protein [Macaca mulatta
rhadinovirus 17577]
gi|7330045|gb|AAF60034.1|AF210726_55 DNA replication protein [Macaca
mulatta rhadinovirus 26-95]
Length = 828
Score = 124 bits (312), Expect = 7e-27
Identities = 183/821 (22%), Positives = 309/821 (37%), Gaps = 159/821 (19%)
Query: 219 RAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYDLQAIKDICATYAIP 278
R Y SP+W ++ G E S VL +Y Q+ IC +
Sbjct: 144 RKVYKMTPSPYWMITLLGSFEASFVLAGTFYFFQSH----------------ICTAETLV 187
Query: 279 HAPR----PDTVSAASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIAADVRETSALE 334
H R S ++ ++ + R S + F Y++ ++ D E+ A++
Sbjct: 188 HLTRLFSSSQGQSLVTVNTYDELGRVFGRSDFL--GIVPNFWAYLKYKMQQDDVESRAID 245
Query: 335 KFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATHLRAVTTHDPNPAASTEQPSPLGR 394
+ I R L +S ++ + +IYL+ +EC + ++ R T+ P PA T P L R
Sbjct: 246 QTINSIRGGLMLSPQDLVHFIYLSFYECMNAQTFLSYSR-TTSSLPTPA--TVNPPQLCR 302
Query: 395 EAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTAKAYLRARTYAPGALTPAPAYCGAV 454
F HV A N Y+ +T + Y + A +CG
Sbjct: 303 RLEADFKEHVMAYYNKASYLSTYIT--ILTVPAPLPDGYENFQELA------CQYWCGQS 354
Query: 455 DSATKMMGRLADAEKLLVPRGWPAFAPASPGEDTAGGTPPPQTCGIVKRLLRLAATEQQG 514
++M R+ D + + +D +G LL LAA +Q
Sbjct: 355 RDVAEIMTRIND-----------QYPQLNLTKDLSG-------------LLDLAALDQYS 390
Query: 515 PTPPAIAALIRNAAVQTPLPVYRISMVPTGQAFAALAWDDWARITRDARLAEAVVSAEAA 574
P V + +P YR + Q F + D DA + ++ E A
Sbjct: 391 GGPKE-----NLFTVASRIPTYRCEFL-NKQYFVLMHAD-----CIDAYWKQNIIVPEDA 439
Query: 575 AHPDHGALGRRLTDRI--RAQGPVMPPGGLDAGGQMYVNRNEIFNGALAITNIILDLDIA 632
G + LT RI G +P Q+ V+R+E FN L + +LD D+
Sbjct: 440 QL--QGLTDQDLTSRIFYCDLGLSLP----TFKQQILVSRHEYFNPRLPVYRWVLDFDLK 493
Query: 633 LKE-PVPFRRLHEALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKSACRPGPASVGSGS 691
+ E ++ R+ L +QL+ P + P+ +P YFFKSAC PA
Sbjct: 494 VTEGRRTLNDIYNICVTLRQVILETLQLIGP---LKPN-HPVYFFKSAC---PAVT---- 542
Query: 692 GLGNDDDGDWFPCYDDAGDEEWAEDPGAMDTSHDPPDDEVAYFDLCHEVGPTAEPRETDS 751
W +D DT+ CH
Sbjct: 543 ---------------------WPDD--ISDTA------------FCH------------- 554
Query: 752 PVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYVKNFLLI 811
C KIG+R+ P P+ Y + GS + + ++ + V LD +++
Sbjct: 555 ----CDAKIGMRIVTPFPSGYCLVGSAPLVSLTDILNRVVKLDTRLASEYPGILEDKGPF 610
Query: 812 DTGVYAHGHSLRLPYFAKIAPDGPACGRLLPVFVIPPACKDVPAFVAAHADPRRFHFHAP 871
D+G+YA G +R+P+ K+ P G RLL + + P D A++ HAP
Sbjct: 611 DSGIYAKGRCVRVPHCYKVGPGG-ELSRLLKIIICHPEESDKSAYLKNAFKVSNLLHHAP 669
Query: 872 PTYLASPREIRVLHSLGGDYVSFFERKASRNALEHFGRRETLTEVLGRYNVQPDAGGTVE 931
+ + +++++ + F E K N + L E + R +P ++
Sbjct: 670 GDSVT--KNGHLVYAITDENEGFLESKTKNNLPKTI---TDLAEKIERTTEKP----LID 720
Query: 932 GFASELLGRIVACIETHFP-EHAGEYQAVSVRRAVSKDDWVLLQLVPVRGTLQQSLSCLR 990
A+ + ++ I+ FP + G++ +VS + ++Q+ P +G + C+
Sbjct: 721 WAATAVWPKLHDTIQRFFPDDRIGQFASVSFMHSGDN----IIQVKPQKG---NNFFCIN 773
Query: 991 FKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSN 1031
KH R T R F+ L + + V+ QCFAAKC+ N
Sbjct: 774 HKH-RNHTQTVRVFLTLHSTKESEVTVTFMSQCFAAKCNHN 813
>gi|9628345|ref|NP_042936.1| helicase /primase complex [Human
herpesvirus 6]
gi|1718005|sp|P52467|UL52_HSV6U DNA helicase/primase complex protein
gi|854022|emb|CAA58377.1| U43, helicase /primase complex [Human
herpesvirus 6]
gi|1044873|emb|CAA63169.1| U43 orf [Human herpesvirus 6]
Length = 860
Score = 119 bits (297), Expect = 4e-25
Identities = 208/963 (21%), Positives = 356/963 (36%), Gaps = 175/963 (18%)
Query: 88 SFRVTFCLLGTEVGGTHQARGRTRPMFVCRFERADDVAALQDALAHGTPLQPDHIAATLD 147
S V+FCL + + R +FVC E+ + +Q A +P++ + +A +L+
Sbjct: 39 SNNVSFCLQTQKCKNSK----RIDTVFVCHAEKLNLSHYIQTA----SPIKAEDVANSLN 90
Query: 148 AEATFALHANMILALTVAINNASPRTGRDAAAAQYDQGASLRSLVGRTSLGQRGLTTLYV 207
+ T +L+ +MIL+ +TG++ ++ A Y
Sbjct: 91 DKETESLYVDMILS----------QTGKEREDVEFKYMA-------------------YF 121
Query: 208 HHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYDLQA 267
H + + Y + SPFWFLS +G E L+LT YYL + Q+ +Q
Sbjct: 122 HKSL--IIKYLTGKFLLPTSPFWFLSTYGQTEGMLLLTMFYYLFEEQKSTITTTKNYVQC 179
Query: 268 IKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIAADV 327
+ ++ + ++ + F + A F Y ++ D
Sbjct: 180 FTENTGNMVFTYSSMSEFINITLKSKFRKLF--------------ADFSTYARQKNLRDK 225
Query: 328 RETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATHLRAVTTHDPN-PAAST 386
E L+ I R +++ + YIY+A+ + + +T++D N P
Sbjct: 226 EEFKHLDTQINLFRKSSHLTNTFRVHYIYIAYNTALETTKFVNYCN-LTSYDSNLPIGQQ 284
Query: 387 EQPSP--LGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTAKAYLRARTYAPGAL 444
Q + LG E C ++ N Y K T +D K T AL
Sbjct: 285 CQRNLHILGNSLHENLLCIMKQYFNADCYFK-------TYIDIKRLKNPNLNVTEYEYAL 337
Query: 445 TPAPAYCGAVDSATKMMGRLADAEKLLVPRGWPAFAPASPGEDTAGGTPPPQTCGIVKRL 504
A+ S ++ +A K G F+P PG ++ L
Sbjct: 338 VSKKKTIQALTSE-QITRAIAKCNK----NGEGLFSPVKPG---------------LQGL 377
Query: 505 LRLAATEQ--QGPTPPAIAALIRNAAVQTPLPVYRISMVPTGQAFAALAWDDWARITRDA 562
L ++A+++ Q + P PV+R+ ++ F +DW
Sbjct: 378 LEISASDRYVQIQDKRIYRRQHLHKDYHRPFPVFRVQLLHKN-IFCFGNSEDWYENMGFN 436
Query: 563 RLAEAVVSAEAAAHPDHGALGRRLTDRIRAQGPVMPPGGLDAGGQMYVNRNEIFNGALAI 622
R+ + + PD LT I Q D Q Y R+EIFN + +
Sbjct: 437 RILQYL--------PDEYISDEALTRAIWLQDTHFLCD--DVEKQFYTTRHEIFNERIPV 486
Query: 623 TNIILDLDIALKEPVPFRR--LHEALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKSAC 680
TN I DLD+ L++ R + A + +FP+ +D D +P +FFK+ C
Sbjct: 487 TNYIGDLDLPLQDTATITEETFFSMCRLIRLTLINAWKKIFPS--IDTDTHPIFFFKTQC 544
Query: 681 RPGPASVGSGSGLGNDDDGDWFPCYDDAGDEEWAEDPGAMDTSHDPPDDEVAYFDLCHEV 740
DT++D D
Sbjct: 545 ----------------------------------------DTTNDTLDY----------- 553
Query: 741 GPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEA 800
T +P E C C KIGLR+ +P+P + G ++ +++++ + LD++ +
Sbjct: 554 --TEDPTEIKQ-FCVCRKKIGLRISIPLPNGTAIAGGEPLKQLSKILNHVMCLDQELSQI 610
Query: 801 IGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPAC--GRLLPVFVIPPACKD-VPAFV 857
+ S D G+Y GH +R+ Y K D GRL P+F++P ++ F+
Sbjct: 611 LNSITFPGECFDIGIYHTGHCIRIGYMYKTDMDKGKMLHGRLTPIFIVPEGYRNSCKTFI 670
Query: 858 AAHADPRRFHFHAPPTYLASPREIRVLHSLGG---DYVSFFERKASRNALEHFGRRETL- 913
D H T A E+ + G + +SF + K+ + + ETL
Sbjct: 671 QMQMDLNNLLHHG--TKKAPIEELIYNITDKGCPKENLSFMDLKSRQLWNKVNIATETLI 728
Query: 914 TEVLGRYNVQPDAGGTVEGFAS--ELLG--RIVACIETHFPEH-AGEYQAVSVRRAVSKD 968
T+ L + +A + S L+G I + TH+ A ++ V+ + SK+
Sbjct: 729 TKYLNTHGFNNNATSADDSLLSFIRLIGWPIIKTQLITHYETRIAQQFSQVTFIKIDSKN 788
Query: 969 DWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKC 1028
LQ+ + SCL +H R +R ++ L NRL + L CFA KC
Sbjct: 789 ----LQIKKTQFGRVSDFSCLNRQH-RGNRDNVLVYIQLKAD-GNRLILILWSTCFATKC 842
Query: 1029 DSN 1031
SN
Sbjct: 843 QSN 845
>gi|18025484|gb|AAK95428.1| BSLF1 [cercopithicine herpesvirus 15]
Length = 874
Score = 117 bits (293), Expect = 1e-24
Identities = 197/847 (23%), Positives = 317/847 (37%), Gaps = 175/847 (20%)
Query: 219 RAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYDLQAIKDICATYAIP 278
R+ Y S WFLS FG E VL + Y G ++ + + +
Sbjct: 146 RSIYRVNVSARWFLSTFGSHEAQFVLVSAAYYFW-------GIPCTIETLTHLTELFTSE 198
Query: 279 HAPRPDTVSAASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIAADVRETSALEKFIT 338
S A++TS A + +S +A A F + ++ D RE A+ + I
Sbjct: 199 AGQ-----SLAAVTSLAELGEVFGSSVWAERTEA--FARFAREKLRRDSREIRAVARTID 251
Query: 339 HDRSCLRVSDREFITYIYLAHFECFSPPRLATHLRAVTTHDPN--PAASTEQPSPLGREA 396
R L ++ + + Y+YLAH +CF+ + R + + P PS L R
Sbjct: 252 AYRGRLPLASADLVRYVYLAHAQCFNEATFKRYSRITSVGEIGRLPVGGVVLPSLLDRGF 311
Query: 397 VEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTAKAYLRARTYAPGALTPAPAYCGAVDS 456
E + + + E+V+ K +R +P + P P
Sbjct: 312 AEHMRTYFTRETYLSEHVR-------------VQKLNIRTEPPSPYSWDPDPED----GL 354
Query: 457 ATKMMGRLAD-AEKLLVPRGWPAFAPASPGEDTAGGTPPPQTCGIVKRLLRLAATEQQGP 515
A G AD A +L W A G PP G + + Q P
Sbjct: 355 ARAWAGLSADVARELAELASWHA---------EEGPAYPPSLRGFLCLAGQATGHGQWNP 405
Query: 516 TPPAIAALIRNAAVQTP--LPVYRISMVPTGQAFAALAWDDWARITRDARLAEAVVSAEA 573
+ +AA+++ LPV+ + F +A D ++ ARLAE V
Sbjct: 406 KEQ----FLPDAALRSGQRLPVFLCHFADR-RYFVMVAADPFS-----ARLAEVVSVPAD 455
Query: 574 AAHPDHGALGRRLTDRIRAQGPVMPPGGLDAGGQMYVNRNEIFNGALAITNIILDLDIAL 633
PD RLT I L G Q++V+R+E FN L + N++LDLD+
Sbjct: 456 CRLPD-----TRLTRAISYTPSYFSQNSL--GEQLFVSRHEYFNPRLPVCNLVLDLDLKT 508
Query: 634 K-EPVPFRRLHEALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKSACRPGPASVGSGSG 692
+ P +++ RR L ++ L P +R ++P YFFKSAC P
Sbjct: 509 RGAPWTLEEIYDLCLTVRRELLRLMRRLGPVSR----SHPVYFFKSACPP---------- 554
Query: 693 LGNDDDGDWFPCYDDAGDEEWAEDPGAMDTSHDPPDDEVAYFDLCHEVGPTAEPRETDSP 752
D E ED V F +C
Sbjct: 555 ----------------PDSENMED--------------VLPFCIC--------------- 569
Query: 753 VCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLD------RDFVEAIGSYVK 806
T K+G RV P+P + + G+ ++G V+Q+ + L R ++ IG+
Sbjct: 570 ----TGKLGFRVITPLPRGHAIVGTSAVQGFVCVLQKLMGLTACLRRLRHKIKDIGA--- 622
Query: 807 NFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRLLPVFVIPPACKDVPAFVAAHADPRRF 866
L D+GVY G +RLP+ K+ G A GR L +FV P +D ++V + +
Sbjct: 623 --PLFDSGVYHAGRCIRLPHTYKV-DRGGALGRQLRLFVCHPEEEDKRSYVENALNIQNL 679
Query: 867 HFHAPPTYLASPREIRVLHSLGGDYVSFFERKASRNALEHFGRRETLTEVLGRYNVQPDA 926
H+ ++ P + + D + R+ RETL + +A
Sbjct: 680 LHHS--LHVGWPAPKTFCYHVSDDGRDYLIRRT----------RETLPPTV------ENA 721
Query: 927 GGTVEG-FASELLGRIVACI--------ETHFPEHA-GEYQAVSVRRAVSKDDWVLLQLV 976
+EG +L+ + +C+ T PE ++ V+ + L+Q+
Sbjct: 722 CAAIEGQLGLDLVAWVSSCVWPSVMSTLATAVPEDKFPQFLHVTFEQTGPN----LVQVC 777
Query: 977 PVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHTL 1036
RG ++ +CLR H R S R F+ L + V+ QCFA +C +N+
Sbjct: 778 HGRG---RNFACLRHNH-RTSSKNVRVFLVLYY-TPQAITVTFMSQCFAGRCGANQPTAH 832
Query: 1037 FTIDAGT 1043
F+I T
Sbjct: 833 FSISVPT 839
>gi|9633114|ref|NP_050224.1| helicase/primase complex [Human
herpesvirus 6B]
gi|1718006|sp|P52540|UL52_HSV6Z DNA helicase/primase complex protein
gi|11278272|pir||T44003 HSV primase [imported] - human herpesvirus 6
gi|405161|gb|AAB06341.1| U43 [Human herpesvirus 6B]
gi|4996031|dbj|BAA78264.1| HSV primase [Human herpesvirus 6]
Length = 860
Score = 116 bits (291), Expect = 2e-24
Identities = 204/966 (21%), Positives = 358/966 (36%), Gaps = 181/966 (18%)
Query: 88 SFRVTFCLLGTEVGGTHQARGRTRPMFVCRFERADDVAALQDALAHGTPLQPDHIAATLD 147
S V+FCL + + R +FVC E+ + +Q A +P++ + +A +L+
Sbjct: 39 SNNVSFCLQTQKCKNSK----RIDTVFVCHAEKLNLSHYIQTA----SPIKAEDVANSLN 90
Query: 148 AEATFALHANMILALTVAINNASPRTGRDAAAAQYDQGASLRSLVGRTSLGQRGLTTLYV 207
+ T L+ +MIL+ +TG++ ++ A Y
Sbjct: 91 DKETELLYVDMILS----------QTGKEKEDVEFKYMA-------------------YF 121
Query: 208 HHEVRVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYDLQA 267
H + + Y + SPFWFLS +G E L+LT YYL + Q+ +Q
Sbjct: 122 HKSL--IIKYLTGKFLLPTSPFWFLSTYGQTEGLLLLTMYYYLFEEQKSTITTTKNYVQC 179
Query: 268 IKDICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIAADV 327
+ + ++ + ++ + F + A F Y ++ D
Sbjct: 180 FTENTGSMVFTYSSMSEFINITLKSKFRKLF--------------ADFATYARQKNLRDK 225
Query: 328 RETSALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATHLRAVTTHDPN-PAAST 386
E L+ I R +++ + YIY+A+ + + +T++D N P
Sbjct: 226 EEFKYLDTQINLFRKSSHLTNTFRVHYIYIAYNTALETTKFVNYCN-ITSYDSNLPIGQQ 284
Query: 387 EQPSP--LGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTAKAYLRARTYAPGAL 444
Q + LG E C ++ N Y K T +D K T AL
Sbjct: 285 CQRNVHILGNSLHENLLCIMKQYFNADCYFK-------TYIDIKRLKNPDLNVTEYEYAL 337
Query: 445 TPAPAYCGAVDSATKMMGRLADAEKLLVPRGWPAFAPASPGEDTAGGTPPPQTCGIVKRL 504
A+ S ++ +A K G F+P PG ++ L
Sbjct: 338 ASKKKTIQALTSE-QITRAIAKCNK----NGEGLFSPVKPG---------------LQGL 377
Query: 505 LRLAATEQ--QGPTPPAIAALIRNAAVQTPLPVYRISMVPTGQAFAALAWDDWARITRDA 562
L ++A+++ Q + P PV+R+ ++ F +DW
Sbjct: 378 LEISASDKYVQIQDKRIYRRQHLHKDYHRPFPVFRVQLLHKN-IFCFGNSEDWYENMGFN 436
Query: 563 RLAEAVVSAEAAAHPDHGALGRRLTDRIRAQGPVMPPGGLDAGGQMYVNRNEIFNGALAI 622
R+ + + PD LT I Q + Q Y R+EIFN + +
Sbjct: 437 RILQYL--------PDEYISDEALTRAIWLQDTHFLCDDFEK--QFYTTRHEIFNERIPV 486
Query: 623 TNIILDLDIALKEPVPFRR--LHEALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKSAC 680
TN I DLD+ L++ R + A + +FP+ +D +P +FFK+ C
Sbjct: 487 TNYIGDLDLPLQDTATITEETFFSMCRLIRLTLINAWKKIFPS--IDTHTHPIFFFKTQC 544
Query: 681 RPGPASVGSGSGLGNDDDGDWFPCYDDAGDEEWAEDPGAMDTSHDPPDDEVAYFDLCHEV 740
D D A+D + DP E+ F
Sbjct: 545 -------------------------DTTND--------ALDYTEDPT--EIKQF------ 563
Query: 741 GPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEA 800
C C KIGLR+ +P+P + G ++ +++++ + LD++ +
Sbjct: 564 -------------CICRKKIGLRISIPLPNGTAIAGGEPLKQLSKILNHVMCLDQELSQI 610
Query: 801 IGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPAC--GRLLPVFVIPPACKD-VPAFV 857
+ S D G+Y GH +R+ Y K D GRL P+F++P ++ F+
Sbjct: 611 LNSLTFPGECFDIGIYHTGHCIRIGYMYKTDMDKGKMLHGRLTPIFIVPEGYRNSCKTFI 670
Query: 858 AAHADPRRFHFHAPPTYLASPREIRVLHSLGG-----DYVSFFERKASR--NALEHFGRR 910
D H +P E +++S+ + +SF + K+ + N + +
Sbjct: 671 QMQMDLNNLLHHGTK---KAPIE-ELIYSITDKGCPKENLSFMDLKSRQLWNKV-NIATD 725
Query: 911 ETLTEVLGRYNVQPDAGGTVEGFAS--ELLG--RIVACIETHFPEH-AGEYQAVSVRRAV 965
+T+ L + +A + S L+G I + TH+ A ++ V+ +
Sbjct: 726 TLITKYLNTHGFNNNATSADDSLLSFIRLIGWPIIKTQLITHYETRIAQQFSQVTFLKID 785
Query: 966 SKDDWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFA 1025
SK+ LQ+ + SCL +H R +R ++ L NRL + L CFA
Sbjct: 786 SKN----LQIKKTQFGRVSDFSCLNRQH-RGNRDNVLVYIQLKAD-GNRLILILWSTCFA 839
Query: 1026 AKCDSN 1031
KC SN
Sbjct: 840 TKCQSN 845
>gi|9625608|ref|NP_039859.1| DNA helicase-primase complex component
[Human herpesvirus 4]
gi|136937|sp|P03193|UL52_EBV HELICASE/PRIMASE COMPLEX PROTEIN
(PROBABLE DNA REPLICATION PROTEIN BSLF1)
gi|73964|pir||QQBE15 BSLF1 protein - human herpesvirus 4 (strain
B95-8)
gi|1334862|emb|CAA24848.1| BSLF1 reading frame, homologous to RF 6
VZV [Human herpesvirus 4]
gi|23893608|emb|CAD53412.1| helicase/primase complex protein [Human
herpesvirus 4]
Length = 874
Score = 112 bits (280), Expect = 4e-23
Identities = 192/844 (22%), Positives = 314/844 (36%), Gaps = 164/844 (19%)
Query: 212 RVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYDLQAIKDI 271
+++ RR Y + S WF+S FG E VL T Y G ++ + +
Sbjct: 140 KIVGCLRRIYRVNI-SARWFISTFGSHEAQFVLVTAAYYFW-------GIPCTIETLAHL 191
Query: 272 CATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIAADVRETS 331
+ S A++TS A + +S +A A F + ++ D RE
Sbjct: 192 TELFTSESGQ-----SLAAVTSLAELGEVFGSSAWAEQTEA--FAHFAHEKLRRDSREIR 244
Query: 332 ALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATHLRAVTTHDPN--PAASTEQP 389
A+ + I R L ++ + + Y+YLAH +CF+ + + + + P+ P
Sbjct: 245 AVARTIDAYRGRLPLASADLVRYVYLAHAQCFNEGTFKRYSQLTSMGEIGCLPSGGVVLP 304
Query: 390 SPLGREAVEQFFCHVRAQLNIGEYVKHNVTPRETVLDGDTAKAYLRARTYAPGALTPAPA 449
S L R E H+R RET L L+ R P T P
Sbjct: 305 SLLDRGFAE----HMRTYFT-----------RETYLAEHVRVQQLKIRMEPPAPYTWDPD 349
Query: 450 YCGAVDSATKMMGRLADAEKLLVPRG-WPAFAPASPGEDTAGGTPPPQTCGIVKRLLRLA 508
+ A G D + LV W A G T PP G + +
Sbjct: 350 PDDGLMRA--WAGLSVDVARELVELARWHA---------DEGPTYPPTLQGFLCLAGQAT 398
Query: 509 ATEQQGPT----PPAIAALIRNAAVQTPLPVYRISMVPTGQAFAALAWDDWARITRDARL 564
Q P PP + ++ LPV+ F A D ++ + L
Sbjct: 399 CRGQWNPKEQFLPPTVLRRVQR------LPVFLCHFADR-HYFVMTAADPFS-----SHL 446
Query: 565 AEAVVSAEAAAHPDHGALGRRLTDRIRAQGPVMPPGGLDAGGQMYVNRNEIFNGALAITN 624
AE V + PD R + PV Q++V+R+E FN L + N
Sbjct: 447 AEVVSTPTNCRLPD------TCLTRALSYTPVYYSQN-SLSEQLFVSRHEYFNPRLPVCN 499
Query: 625 IILDLDIALK-EPVPFRRLHEALGHFRRGALAAVQLLFPAARVDPDAYPCYFFKSACRPG 683
++LDLD+ +K P +++ RR L ++ L P +R A+P YFFKSAC P
Sbjct: 500 LVLDLDLKIKGAPWSLEEIYDLCRTVRREVLRLMRRLGPVSR----AHPVYFFKSACPPA 555
Query: 684 PASVGSGSGLGNDDDGDWFPCYDDAGDEEWAEDPGAMDTSHDPPDDEVAYFDLCHEVGPT 743
DP M ++V F +C
Sbjct: 556 --------------------------------DPDNM--------EDVLPFCIC------ 569
Query: 744 AEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLD------RDF 797
T K+G RV P+P + + G+ ++G V+Q+ + L R
Sbjct: 570 -------------TGKLGFRVITPLPRGHAIVGTSAVQGFVSVLQKLMGLTACLRRMRHK 616
Query: 798 VEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRLLPVFVIPPACKDVPAFV 857
++ IG+ L D+GVY G +RLP+ K+ G R L +FV P +D ++V
Sbjct: 617 IKEIGA-----PLFDSGVYHAGRCIRLPHTYKV-DRGGGLSRQLRLFVCHPEEEDKHSYV 670
Query: 858 AAHADPRRFHFHAPPTYLASPREIRV-LHSLGGDYVSFFERKASRNALEHFGRRETLTEV 916
+ + H+ +P+ + G DY+ R+ +E+ +
Sbjct: 671 KNALNIQNLLHHSLHVGWPAPKTFCYHIADDGRDYLIQRTRETLPPTVEN-----VCAMI 725
Query: 917 LGRYNVQPDAGGTVEGFASELLGRIVACIETHFPEHA-GEYQAVSVRRAVSKDDWVLLQL 975
G + V +S + +++ + T PE ++ V+ + L+Q+
Sbjct: 726 EGHLGLD-----LVAWVSSCIWPSLMSTLATAVPEDKFPQFLHVTFEQTGPN----LVQV 776
Query: 976 VPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHT 1035
RG ++ +CLR H RAS R F+ L + + V+ QCFA +C +N+
Sbjct: 777 CHARG---RNFACLRHTH-RASSKNVRVFLVLYY-TSQAITVTFMSQCFAGRCGANQPTA 831
Query: 1036 LFTI 1039
F+I
Sbjct: 832 HFSI 835
>gi|18846023|ref|NP_572109.1| ORF 56; DNA replication protein homolog;
EBV BSLF1 homolog [Human herpesvirus 8]
gi|1718309|gb|AAC57138.1| ORF 56; DNA replication protein homolog;
EBV BSLF1 homolog [Human herpesvirus 8]
gi|2246489|gb|AAB62614.1| DNA replication protein [Human herpesvirus
8]
Length = 843
Score = 108 bits (271), Expect = 4e-22
Identities = 115/446 (25%), Positives = 178/446 (39%), Gaps = 94/446 (21%)
Query: 607 QMYVNRNEIFNGALAITNIILDLDIALKEPVP--FRRLHEALGHFRRGALAAVQLLFPAA 664
Q+ V+R+E FN L + +LD D+ + + F +H R L +QLL P
Sbjct: 479 QLLVSRHEYFNPRLPVYRWVLDFDLPVCRDIDRTFEEVHSLCCSLREAILDIIQLLGP-- 536
Query: 665 RVDPDAYPCYFFKSACRPGPASVGSGSGLGNDDDGDWFPCYDDAGDEEWAEDPGAMDTSH 724
VDP +P YFFKSAC P +EW + A
Sbjct: 537 -VDPRTHPVYFFKSACPP----------------------------DEWRGEDVA----- 562
Query: 725 DPPDDEVAYFDLCHEVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVA 784
+ C C DK+G+R+ +P P V GS M +
Sbjct: 563 -------------------------STSFCRCHDKLGMRIIVPFPEGVCVVGSEPMVALT 597
Query: 785 RVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRLLPVF 844
++ + + LD + V S K D G+Y G S+RLP+ K+ G C RLL +
Sbjct: 598 GILNRTIKLDPELVHRFPSIQKKGGPFDCGIYGRGRSVRLPHCYKVGLVGELC-RLLKIL 656
Query: 845 VIPPACKDVPAFVAAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYVSFFERKASR--- 901
V PA +V R H+P ++ R+++S+ +F E K
Sbjct: 657 VCHPAPNGKAQYVRRAFTLRELLHHSPGH--SAGHVGRIIYSIMDRNENFLENKTISYLP 714
Query: 902 NALEH-FGRRETLTEVLGRYNVQPDAGGTVEGFA-SELLGRIVACIETHFP-EHAGEYQA 958
+ H F R ETL +G ++E + S + + I FP E A ++
Sbjct: 715 AKIPHIFQRIETL------------SGRSIEDWLHSAVWDKAYDTICKFFPDEKAQQFSH 762
Query: 959 VSVRRAVSKDDWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVS 1018
V A ++ ++QL P +G + C+ H S+ T R F+ L + + V+
Sbjct: 763 V----AFTQQGENIIQLRPRQG---RHFLCINHNHKNKSK-TVRVFLTLHSIRVSEVTVT 814
Query: 1019 LCQQCFAAKCDSN--RLHTLFTIDAG 1042
L QCFA+KC++N H F + G
Sbjct: 815 LMSQCFASKCNNNVPTAHFSFVVPVG 840
Score = 63.2 bits (152), Expect = 3e-08
Identities = 40/150 (26%), Positives = 68/150 (44%), Gaps = 21/150 (14%)
Query: 219 RAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYDLQAIKDICATYAIP 278
R Y SP+W LS FG E VLT+ +Y + +C T +
Sbjct: 150 RKLYKMTPSPYWMLSAFGAQEAQFVLTSSFYFFEHTV---------------VCTTETVS 194
Query: 279 HAPR----PDTVSAASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIAADVRETSALE 334
H R + S+TS + + TS + R A F YV+ ++A D ET A++
Sbjct: 195 HLSRLFSPQQGQTLVSVTSHEELGQLYGTSPFRRRVPA--FVAYVKEKLARDSLETEAID 252
Query: 335 KFITHDRSCLRVSDREFITYIYLAHFECFS 364
+ I R L +S+++ + +IY++ ++C +
Sbjct: 253 RTIDQIRGKLMLSNQDLVHFIYISFYQCLN 282
>gi|9628766|ref|NP_043797.1| primase [Human herpesvirus 7]
gi|1718007|sp|P52468|UL52_HSV7J Helicase/primase complex protein
gi|7520844|pir||T41945 primase - human herpesvirus 7 (strain JI)
gi|1139645|gb|AAC54705.1| primase
gi|2746273|gb|AAC40757.1| primase [Human herpesvirus 7]
Length = 861
Score = 98.2 bits (243), Expect = 7e-19
Identities = 104/454 (22%), Positives = 178/454 (38%), Gaps = 85/454 (18%)
Query: 607 QMYVNRNEIFNGALAITNIILDLDIALKEP-VPFRRLHEALGHFRRGALA-AVQLLFPAA 664
Q YV R+EIFN L +TN I DLD+ L++ + L ++ R L A Q +FP
Sbjct: 471 QFYVTRHEIFNEYLPVTNYIGDLDLPLQDSAIITESLFFSMCKLMRNVLINAWQKIFPF- 529
Query: 665 RVDPDAYPCYFFKSACRPGPASVGSGSGLGNDDDGDWFPCYDDAGDEEWAEDPGAMDTSH 724
+D DAYP +FFK+ C
Sbjct: 530 -IDKDAYPIFFFKTTC----------------------------------------SNPE 548
Query: 725 DPPDDEVAYFDLCHEVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVA 784
+P + V Y E ++ C C KIGLR+ +P+P + GS ++ ++
Sbjct: 549 NPLNHNVCY-------------NEVETAFCVCKKKIGLRIAIPIPQGTAIIGSEPLKQLS 595
Query: 785 RVIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGP--ACGRLLP 842
++ + L+ D ++ + S + DTG+Y G LRL + K+ + GRL P
Sbjct: 596 KIFNHLMCLNHDLMQILNSVIFPGECFDTGIYNTGRCLRLGFMYKVDEENNRFLYGRLKP 655
Query: 843 VFVIPPAC-KDVPAFVAAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYVSFFERKASR 901
+F++P K+ FV+ D H + + SF + + +
Sbjct: 656 IFIVPEKMKKNFQDFVSMQLDLNNILHHGTKDQTITEIIYSIFDKACPTEFSFIDSRTKQ 715
Query: 902 NALEHFGRRETL------------TEVLGRYNVQPDAGGTVEGFASELLGRIVACIETHF 949
ETL T L R ++ ++ ++L + + E
Sbjct: 716 LYHRKQSSLETLCLKYLHVNGFSETSCLSRDDLLMTFTRSIAW--PQMLKKNIQHCEA-- 771
Query: 950 PEHAGEYQAVSVRRAVSKDDWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSV 1009
A ++Q V+ + K+ +QL ++ SCL H + +R ++ V
Sbjct: 772 -RTATQFQHVTFLKIDHKN----IQLKKLQNGKLSDFSCLTRNH-KGNRENVLVYLEFKV 825
Query: 1010 GANNRLCVSLCQQCFAAKCDSN--RLHTLFTIDA 1041
NNR+ + L +CF KC SN ++H+ +D+
Sbjct: 826 D-NNRILIILWSKCFTTKCKSNSKQVHSSVVLDS 858
>gi|136940|sp|Q00040|UL52_HSVE4 DNA HELICASE/PRIMASE COMPLEX PROTEIN
(DNA REPLICATION PROTEIN UL52)
gi|480339|pir||S36704 B1 protein - equine herpesvirus 4
gi|59217|emb|CAA35669.1| B1 [Equine herpesvirus 4]
Length = 197
Score = 95.5 bits (236), Expect = 5e-18
Identities = 70/190 (36%), Positives = 98/190 (50%), Gaps = 15/190 (7%)
Query: 20 VTALYATDGCVITSSIALLTNSLLGAEPVYIFSYD-------AYTHDGR---ADGPTEQD 69
+ LYATD CVIT S+ LLT +E Y+ SYD + R AD D
Sbjct: 10 IRVLYATDSCVITYSLMLLTGQE-SSEDAYVISYDWSSELDDLFGSQPRVLDADVGDSWD 68
Query: 70 RFEESRALYQASGGLNGDSFRVTFCLLGTEVGG-THQARGRTRPMFVCRFERADDVAALQ 128
++S A+ L V+FCLL VGG + + + R RPMFVC F AL
Sbjct: 69 TTDQSDEELLAAALLERKP-SVSFCLLSGIVGGASDEPQERIRPMFVCAFLTLTGARALT 127
Query: 129 DALAHGTPLQPDHIAATLDAEATFALHANMILALTVAINNASPRTGRDAAAAQYD--QGA 186
L HG P+ + L TF LH ++ILAL + ++NA+ RTGR AAAA+YD +G+
Sbjct: 128 KTLLHGHPISSKILLQALVDGDTFQLHNDLILALAITLDNATARTGRTAAAAKYDPQRGS 187
Query: 187 SLRSLVGRTS 196
+++G ++
Sbjct: 188 VKAAILGHST 197
>gi|9629585|ref|NP_044893.1| DNA replication protein [murid
herpesvirus 4]
gi|1850854|emb|CAA70270.1| DNA helicase-primase complex () component
[Murid herpesvirus 4]
gi|2317955|gb|AAB66413.1| DNA replication protein [murid herpesvirus
4]
gi|6625619|gb|AAF19320.1|AF105037_52 56 [murid herpesvirus 4]
Length = 835
Score = 85.9 bits (211), Expect = 4e-15
Identities = 87/316 (27%), Positives = 138/316 (43%), Gaps = 22/316 (6%)
Query: 726 PPDDEVAYFDLCHEVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVAR 785
PP V +F EPR P C+C+ KIGLR+ P+P + + G+ + +AR
Sbjct: 540 PPSHPVYFFKSECNSDIYMEPR----PFCTCSKKIGLRIITPLPMRHAIVGATPLITLAR 595
Query: 786 VIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRLLPVFV 845
VI + + L++ E S L DTG+Y+ G +RLP+ K G RLL +FV
Sbjct: 596 VINRTIRLNKRVCELFPSISSTEFLFDTGIYSQGRCIRLPHTYKFTSTG-LPERLLKLFV 654
Query: 846 IPPACKDVPAFVAAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYVSFFERKASRNALE 905
P D ++V +H+ L S + ++ + F K + +
Sbjct: 655 CHP-FPDKTSYVKNSFVLTNLLYHSTSEDLRS-GDYNLILDIRDKDEDFLSCKTVASLPK 712
Query: 906 HFGRRETLTEVLGRYNVQPDAGGTVEGFASELLGRIVACIETHFPEHAGEYQAVSVRRAV 965
+ + L ++LG VQ T+ E L + + ++A E +S V
Sbjct: 713 NSLDIDKLEDILG-CPVQSWIDTTLWPLFCEQLVKYLP------QKNANELNNISF-NVV 764
Query: 966 SKDDWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFA 1025
S + +LQL P RG SCL +H R R F+ L + + + +L QCFA
Sbjct: 765 SNN---MLQLKPRRG---PGFSCLTHQH-RTKSHNVRLFITLGKFSRDVITATLMSQCFA 817
Query: 1026 AKCDSNRLHTLFTIDA 1041
KC++N+ T T+ A
Sbjct: 818 NKCNNNKPVTHCTVHA 833
>gi|1066182|emb|CAA62081.1| protein associated with a DNA helicase
/primase complex [Canine herpesvirus]
gi|1066227|emb|CAA62067.1| DNA helicase/primase complex [Canine
herpesvirus]
Length = 144
Score = 85.5 bits (210), Expect = 5e-15
Identities = 38/76 (50%), Positives = 54/76 (71%)
Query: 607 QMYVNRNEIFNGALAITNIILDLDIALKEPVPFRRLHEALGHFRRGALAAVQLLFPAARV 666
+M +NRNE+FN LAI+NIILD+D LKE +P + L+ + FR G + A+ LLF +
Sbjct: 53 EMDINRNELFNSNLAISNIILDVDFDLKEKIPQKSLYSIMRGFRNGIITALSLLFNDLSI 112
Query: 667 DPDAYPCYFFKSACRP 682
D D+YPCYF+K++C P
Sbjct: 113 DWDSYPCYFYKTSCPP 128
>gi|10140978|ref|NP_065555.1| primase [Alcelaphine herpesvirus 1]
gi|7444318|pir||T03151 primase - alcelaphine herpesvirus 1
gi|2338019|gb|AAC58103.1| primase [Alcelaphine herpesvirus 1]
Length = 837
Score = 84.7 bits (208), Expect = 8e-15
Identities = 76/322 (23%), Positives = 133/322 (40%), Gaps = 34/322 (10%)
Query: 727 PDDEVAYF-DLCHEVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVAR 785
PD EV +F C + E S C+CT+K+G+RV P + GS + + +
Sbjct: 536 PDHEVFFFKSACINLCDPGEASWRPSTFCTCTEKLGMRVVTRFPPGICLKGSEPLTQLTK 595
Query: 786 VIQQAVLLDRDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRLLPVFV 845
++ + + L + + ++ + D G+Y G S+RLP+ K+ G RLL +FV
Sbjct: 596 ILNRVIKLGCGSLLNLSAFQLSNGPFDVGIYGRGRSIRLPHTYKVGKCGQL-ERLLKLFV 654
Query: 846 IPPACKDVPAFVAAHADPRRFHFHAPPTYLASPREIRV-LHSLGGDYVSFFERKASRNAL 904
P D ++ R HA P +I + + D++ ++ + +
Sbjct: 655 CHPEATDKFPYLQNSLKLNRLLHHAQSQDPRGPLKIIYRVEDINEDFL--YKHTQKQLPV 712
Query: 905 EHFGRRETLTEVLGRY-------NVQPDAGGTVEGFASELLGRIVACIETHFPEHAGEYQ 957
+H ++ +L V P GT+ + SE + + + H H
Sbjct: 713 KHEAVIPSIERLLDTSLNCFLLSKVWPKCFGTIRSYMSEEKLQQFSRVVFHPTNHC---- 768
Query: 958 AVSVRRAVSKDDWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCV 1017
++Q+ P RG + CLR+ H R S + R F+ L + +L V
Sbjct: 769 --------------IVQVRPDRGN---NFKCLRYNH-RGSSKSVRVFLILHLKEETKLIV 810
Query: 1018 SLCQQCFAAKCDSNRLHTLFTI 1039
+ QCFA KC SN+ F++
Sbjct: 811 TFMSQCFANKCQSNKAMAHFSV 832
Score = 52.0 bits (123), Expect = 6e-05
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 219 RAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYDLQAIKDICATYAIP 278
R Y+ SP WF++ FG E VL + Y + + +C +
Sbjct: 140 RKYFKLTTSPHWFINTFGAFENHFVLVSSCYYF---------FPVSVSTVDTLCHLAMLY 190
Query: 279 HAPRPDTVSA-ASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIAADVRETSALEKFI 337
+ + +S+ +L A+ +Q F LYV ++A D E A+++ I
Sbjct: 191 SSKKGCPLSSITTLRELGAVA-----TQSPALDRVENFYLYVCDKLARDTLECEAVDRCI 245
Query: 338 THDRSCLRVSDREFITYIYLAHFECFS 364
R L +SD++ + YIYL+ F+CF+
Sbjct: 246 NEFRGQLMLSDQDLVHYIYLSFFQCFN 272
>gi|9631247|ref|NP_048028.1| primase [Ateline herpesvirus 3]
gi|11278270|pir||T42970 primase - ateline herpesvirus 3 (strain 73)
gi|4019283|gb|AAC95581.1| primase [Ateline herpesvirus 3]
Length = 835
Score = 79.0 bits (193), Expect = 4e-13
Identities = 63/287 (21%), Positives = 131/287 (44%), Gaps = 34/287 (11%)
Query: 754 CSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDT 813
C CT K+G R+ P+P V+ GS + + ++ + + +D+ V+ ++ D
Sbjct: 561 CYCTKKLGFRIITPLPTGVVLLGSDPVISIVNILNRTIKIDKQLVDMYPLIMETEGPFDV 620
Query: 814 GVYAHGHSLRLPYFAKIAPDGPACGRLLPVFVIPPACKDVPAFVAAHADPRRFHFHAPPT 873
G+Y G +R+P+ K+ G RLL +FV P + +V + +H+
Sbjct: 621 GIYHRGRCVRIPHTYKVNSSG-RLERLLKLFVCHPHVPNKLQYVMDSLNINNLLYHSQNP 679
Query: 874 YLASPREIRVLHSLGGDYVSFFERKASRNALEHFGRRETLTEVLGRYN------VQPDAG 927
S + ++V++ + +F ++A E+L R N ++
Sbjct: 680 --GSLQHLKVIYDIRDINENFILQRAQ--------------ELLPRTNHNVAEKIESVTN 723
Query: 928 GTVEGFASELL-GRIVACIETHFPEH-AGEYQAVSVRRAVSKDDWVLLQLVPVRGTLQQS 985
+V + ++ + I+ +F E ++ VS + +++++P+ G +
Sbjct: 724 MSVTDWVTDFAWPKFFELIKLYFSEEKVSQFYHVSFVASTGN----IIKIIPLSG----N 775
Query: 986 LSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNR 1032
SCL FKH + + R F++L + +N + ++L QCFA+KC++N+
Sbjct: 776 FSCLNFKH-KLKTQSVRIFLSLHLTTDNSVTLTLMSQCFASKCNNNK 821
Score = 52.8 bits (125), Expect = 3e-05
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 22/150 (14%)
Query: 219 RAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYDLQAIKDICATYAIP 278
R Y + SP+W ++ FG E +LT +Y + C I
Sbjct: 149 RKLYKISSSPYWMITTFGSFEVPFLLTAVFYFFEQHN----------------CTVNTIF 192
Query: 279 HAP----RPDTVSAASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIAADVRETSALE 334
H + +S ++T+F + C TS + + A F Y ++ D E+ A++
Sbjct: 193 HLSSLFEKKPGMSLIAITTFQELGEVCSTSDHLK--RAPDFISYCHTKLLRDSLESKAID 250
Query: 335 KFITHDRSCLRVSDREFITYIYLAHFECFS 364
+ I R L +S+++ YIYL+ F+C +
Sbjct: 251 ESIDTLRGQLMLSNQDLAHYIYLSFFQCLN 280
>gi|13095633|ref|NP_076548.1| DNA replication protein [Bovine
herpesvirus 4]
gi|12802583|gb|AAK07975.1|AF318573_55 DNA replication protein [Bovine
herpesvirus 4]
Length = 843
Score = 78.6 bits (192), Expect = 6e-13
Identities = 65/291 (22%), Positives = 126/291 (42%), Gaps = 18/291 (6%)
Query: 754 CSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDT 813
C+C KIGLR+ P V+ GS + + ++ + V LD++ V+ +++ D
Sbjct: 567 CNCNSKIGLRIITRFPNNVVLVGSDPLISLVTILNRIVKLDKELVKMYPEIMRDNGPFDV 626
Query: 814 GVYAHGHSLRLPYFAKIAPDGPACGRLLPVFVIPPACKDVPAFVAAHADPRRFHFHAPPT 873
G+Y G S+RLP+ K+ +G A LL + V P D +V + + H +
Sbjct: 627 GIYHRGRSVRLPHTYKVGDNG-ALTHLLKIIVCHPYSTDKRGYVMGAYELKNLLHHVGHS 685
Query: 874 YLASPREIRVLHSLGGDYVSFFERKASRNALEHFGRRETLTEVLGRYNVQPDAGGTVEGF 933
+ + + +++S K + T + L ++ +
Sbjct: 686 QKDVFSTVYAIEDINENFLS---SKTQESLQRSSSLMSTKLDALFSMDI-------TDWI 735
Query: 934 ASELLGRIVACIETHFPEHAGEYQAVSVRRAVSKDDWVLLQLVPVRGTLQQSLSCLRFKH 993
+ + RI I +FP+ +Q V+ ++ + ++Q+ P++G+ + CL F H
Sbjct: 736 LNTVWPRIFDNINLYFPDDK-VHQFAYVKFLPTQGN--IVQVKPLKGS---NFRCLTFNH 789
Query: 994 GRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNRLHTLFTIDAGTP 1044
R T R F+ + + + ++ QCFA KC+SN+ F++ P
Sbjct: 790 -RGKVPTVRIFLVFHIIKEHEVIITFMSQCFANKCNSNKSIAHFSVIMAIP 839
>gi|30348560|emb|CAC84352.1| primase [Saimiriine herpesvirus 2]
Length = 835
Score = 77.8 bits (190), Expect = 1e-12
Identities = 63/288 (21%), Positives = 129/288 (43%), Gaps = 36/288 (12%)
Query: 754 CSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDT 813
C CT K+G R+ P+PA V+ GS + ++ + + +D+ + ++ D
Sbjct: 561 CYCTKKLGFRIITPLPAGVVLLGSNPVISFVNILNRTIKIDKKLLATYPLVMETDGPFDV 620
Query: 814 GVYAHGHSLRLPYFAKIAPDGPACGRLLPVFVIPPACKDVPAFVAAHADPRRFHFHAPPT 873
G+Y G +R+P+ K+ G RLL +FV P + +V + +H+P
Sbjct: 621 GIYHKGRCVRIPHTYKVNSSG-RLERLLKLFVCHPHVNNKLQYVMDSFNINNLLYHSPNP 679
Query: 874 YLASPREIRVLHSLGGDYVSFFERKA-------SRNALEHF--GRRETLTEVLGRYNVQP 924
++++ ++ + +F +KA + NA+E ++T+ + + P
Sbjct: 680 --EKVKQLKAVYDIADTNENFILQKAQAQLPQTNHNAVERIESASHMSITDWVAEF-AWP 736
Query: 925 DAGGTVEGFASELLGRIVACIETHFPEHAGEYQAVSVRRAVSKDDWVLLQLVPVRGTLQQ 984
++ + SE E ++ VS + +++++ + G
Sbjct: 737 RLFELIKLYLSE--------------EKVSQFYHVSFAASTGN----IIKIISLSG---- 774
Query: 985 SLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNR 1032
+ SCL FKH + + R F++L + +N + ++L QCFA+KC+SN+
Sbjct: 775 NFSCLNFKH-KLKTQSVRIFLSLHLTPDNCVTLTLMSQCFASKCNSNK 821
Score = 55.8 bits (133), Expect = 4e-06
Identities = 48/205 (23%), Positives = 82/205 (39%), Gaps = 25/205 (12%)
Query: 219 RAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYDLQAIKDICATYAIP 278
R Y + SP+W ++ FG E +LT +Y + C I
Sbjct: 149 RKLYKISSSPYWMITTFGSFEVPFLLTAIFYFFEQHN----------------CTINTIF 192
Query: 279 HAP----RPDTVSAASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIAADVRETSALE 334
H + S ++T+F + C TS Y + A A F Y ++A D E+ A++
Sbjct: 193 HLSSLFEKKLGTSLIAITTFEELGGVCSTSDYLKTAPA--FINYCHIKLARDSLESQAID 250
Query: 335 KFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATHLRAVTTHDPNPAASTEQPSPLGR 394
I R L +S+++ + YIYL+ F+C + + + + + TE L +
Sbjct: 251 TSINTLRGQLMLSNQDLVHYIYLSFFQCLNKDIFIKYSHLTNSDNIHFVPETE---VLAQ 307
Query: 395 EAVEQFFCHVRAQLNIGEYVKHNVT 419
E F + N Y+K +T
Sbjct: 308 SLDENFRNDMLTYYNKSTYLKTYIT 332
>gi|6689295|emb|CAB65429.1| hypothetical protein [Saimiriine
herpesvirus 2]
Length = 543
Score = 77.8 bits (190), Expect = 1e-12
Identities = 63/288 (21%), Positives = 129/288 (43%), Gaps = 36/288 (12%)
Query: 754 CSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDT 813
C CT K+G R+ P+PA V+ GS + ++ + + +D+ + ++ D
Sbjct: 269 CYCTKKLGFRIITPLPAGVVLLGSNPVISFVNILNRTIKIDKKLLATYPLVMETDGPFDV 328
Query: 814 GVYAHGHSLRLPYFAKIAPDGPACGRLLPVFVIPPACKDVPAFVAAHADPRRFHFHAPPT 873
G+Y G +R+P+ K+ G RLL +FV P + +V + +H+P
Sbjct: 329 GIYHKGRCVRIPHTYKVNSSG-RLERLLKLFVCHPHVNNKLQYVMDSFNINNLLYHSPNP 387
Query: 874 YLASPREIRVLHSLGGDYVSFFERKA-------SRNALEHF--GRRETLTEVLGRYNVQP 924
++++ ++ + +F +KA + NA+E ++T+ + + P
Sbjct: 388 --EKVKQLKAVYDIADTNENFILQKAQAQLPQTNHNAVERIESASHMSITDWVAEF-AWP 444
Query: 925 DAGGTVEGFASELLGRIVACIETHFPEHAGEYQAVSVRRAVSKDDWVLLQLVPVRGTLQQ 984
++ + SE E ++ VS + +++++ + G
Sbjct: 445 RLFELIKLYLSE--------------EKVSQFYHVSFAASTGN----IIKIISLSG---- 482
Query: 985 SLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNR 1032
+ SCL FKH + + R F++L + +N + ++L QCFA+KC+SN+
Sbjct: 483 NFSCLNFKH-KLKTQSVRIFLSLHLTPDNCVTLTLMSQCFASKCNSNK 529
>gi|9626011|ref|NP_040258.1| ORF 56~EDRF4~sim. to other HV [Saimiriine
herpesvirus 2]
gi|267215|sp|P14346|UL52_HSVSA HELICASE/PRIMASE COMPLEX PROTEIN
(PROBABLE DNA REPLICATION GENE 56 PROTEIN)
gi|73965|pir||QQBEHA BSLF1 protein - saimiriine herpesvirus 1 (strain
11)
gi|60376|emb|CAA45678.1| unnamed protein product [Saimiriine
herpesvirus 2]
gi|330985|gb|AAA46133.1| first methionine codon in the EDRF4 ORF
Length = 835
Score = 77.8 bits (190), Expect = 1e-12
Identities = 66/290 (22%), Positives = 129/290 (43%), Gaps = 40/290 (13%)
Query: 754 CSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQQAVLLDRDFVEAIGSYVKNFLLIDT 813
C CT K+G R+ P+PA V+ GS + ++ + + +D+ + ++ D
Sbjct: 561 CYCTKKLGFRIITPLPAGVVLLGSNPVISFVNILNRTIKIDKKLLAMYPLIMETDGPFDV 620
Query: 814 GVYAHGHSLRLPYFAKIAPDGPACGRLLPVFVIPPACKDVPAFVAAHADPRR--FHFHAP 871
G+Y G +R+P+ K+ G RLL +FV P + +V D +H H P
Sbjct: 621 GIYHKGRCVRIPHTYKVNSSG-RLERLLKLFVCHPHVDNKLQYVMDSFDINNLLYHSHNP 679
Query: 872 PTYLASPREIRVLHSLGGDYVSFFERKA-------SRNALEHF--GRRETLTEVLGRYNV 922
++++ ++ + +F +KA + NA+E ++T+ + +
Sbjct: 680 ----EKVKQLKAVYDIADTNENFILQKAQAQLPQTNHNAVERIESASHMSITDWVAEF-A 734
Query: 923 QPDAGGTVEGFASELLGRIVACIETHFPEHAGEYQAVSVRRAVSKDDWVLLQLVPVRGTL 982
P ++ + SE E ++ VS + +++++ + G
Sbjct: 735 WPRLFELIKLYLSE--------------EKVSQFYHVSFAASTGN----IIKIISLSG-- 774
Query: 983 QQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQQCFAAKCDSNR 1032
+ SCL FKH R + R F++L + +N + ++L QCFA+KC+SN+
Sbjct: 775 --NFSCLNFKH-RLKTQSVRIFLSLHLTPDNCVTLTLMSQCFASKCNSNK 821
Score = 55.5 bits (132), Expect = 5e-06
Identities = 48/205 (23%), Positives = 82/205 (39%), Gaps = 25/205 (12%)
Query: 219 RAYYGSAQSPFWFLSKFGPDEKSLVLTTRYYLLQAQRLGGAGATYDLQAIKDICATYAIP 278
R Y + SP+W ++ FG E +LT +Y + C I
Sbjct: 149 RKLYKISSSPYWMITTFGSFEVPFLLTAIFYFFEQHN----------------CTINTIF 192
Query: 279 HAP----RPDTVSAASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIAADVRETSALE 334
H + S ++T+F + C TS Y + A A F Y ++A D E+ A++
Sbjct: 193 HLSSLFEKKLGTSLIAITTFEELGGVCSTSDYLKTAPA--FINYCHIKLARDSLESQAID 250
Query: 335 KFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATHLRAVTTHDPNPAASTEQPSPLGR 394
I R L +S+++ + YIYL+ F+C + + + + + TE L +
Sbjct: 251 TSIDTLRGQLMLSNQDLVHYIYLSFFQCLNKDIFIKYSHLTNSDNIHFVPETE---VLAQ 307
Query: 395 EAVEQFFCHVRAQLNIGEYVKHNVT 419
E F + N Y+K +T
Sbjct: 308 SLDENFRKDMLTYYNKSTYLKTYIT 332
>gi|24943142|ref|NP_733904.1| ORF50 [Callitrichine herpesvirus 3]
gi|24762298|gb|AAK38259.2|AF319782_53 ORF50 [callitrichine
herpesvirus 3]
Length = 840
Score = 70.9 bits (172), Expect = 1e-10
Identities = 74/311 (23%), Positives = 124/311 (39%), Gaps = 32/311 (10%)
Query: 729 DEVAYFDLCHEVGPTAEPRETDSPVCSCTDKIGLRVCMPVPAPYVVHGSLTMRGVARVIQ 788
D YF P E P C C +K+GLRV P+P Y + G+ M+G+ V+
Sbjct: 542 DHPVYFFKSACPPPDCENMADILPFCICREKLGLRVITPLPRGYSIIGTRGMQGLVAVLS 601
Query: 789 QAVLLD---RDFVEAIGSYVKNFLLIDTGVYAHGHSLRLPYFAKIAPDGPACGRLLPVFV 845
+ V L R + S F D G+Y+ G +RLP+ K+ G R L +FV
Sbjct: 602 KLVSLSPRVRKLKHKLSSMESFF---DAGIYSQGRCIRLPHTYKVDKSG-VLTRQLRLFV 657
Query: 846 IPPACKDVPAFVAAHADPRRFHFHAPPTYLASPREIRVLHSLGGDYVSFFERKAS----R 901
P D +V + + H+ ++ PR I + + F +K
Sbjct: 658 CHPKVNDKRYYVENALNVQNLLHHS--LHVGWPRPIHFCYHISDQGQGFITKKVKDALPA 715
Query: 902 NALEHFGRRETLTEVLGRYNVQPDAGGTVEGFASELLGRIVACIETHFPEHAGEYQAVSV 961
+L + ET T + V+ T+ T ++Q V+
Sbjct: 716 PSLNFAEKIETSTGLTLSQWVEAKVWPTI----------YTTLTSTIQDNRLAQFQRVTF 765
Query: 962 RRAVSKDDWVLLQLVPVRGTLQQSLSCLRFKHGRASRATARTFVALSVGANNRLCVSLCQ 1021
+ + ++++ RG ++ CLR++H R ++ R F+ L + V+
Sbjct: 766 EQTAAN----IVRVCHPRG---KNFKCLRYQH-RNIASSVRIFLVLH-HTSGVTTVTFMS 816
Query: 1022 QCFAAKCDSNR 1032
QCF+ +C SNR
Sbjct: 817 QCFSGRCGSNR 827
Score = 68.2 bits (165), Expect = 8e-10
Identities = 71/268 (26%), Positives = 118/268 (43%), Gaps = 26/268 (9%)
Query: 156 ANMILALTVAINNASPRTGRDAAAAQYDQGASLRSLVGRTSLG----QRGLTTLYVHHEV 211
A + L T ++ AS R D A SL+ LV +LG QR L
Sbjct: 84 ALLFLRGTKPMDTASARRYLDRTKAL----RSLKPLVELLTLGNKNPQRDLYGAICWLRA 139
Query: 212 RVLAAYRRAYYGSAQSPFWFLSKFGPDEKSLVL-TTRYYLLQAQRLGGAGATYDLQAIKD 270
++ +A RR Y +A S WF+S FG E + VL TT YY ++ ++ +
Sbjct: 140 KITSALRRMYRTNA-SARWFISTFGSREATFVLVTTAYYFHPSEA--------SVETLIQ 190
Query: 271 ICATYAIPHAPRPDTVSAASLTSFAAITRFCCTSQYARGAAAAGFPLYVERRIAADVRET 330
+ + P + S A++TS A +++ TSQ+ R FP + +++ D E
Sbjct: 191 LTELFVHPDQGQ----SLAAVTSCAELSQIFGTSQWTRDLDY--FPAFTRKKLNKDTMEM 244
Query: 331 SALEKFITHDRSCLRVSDREFITYIYLAHFECFSPPRLATHLRAVTTHDPNPAASTEQPS 390
+ I R L +SD + Y+Y AH +CF+ R+ +V T P+ +++
Sbjct: 245 CRVRAMINKYRGQLPLSDTGLVEYVYTAHAQCFN--RVTFERYSVLTSAPHLSSALGVNG 302
Query: 391 PLGREAVEQFFCHVRAQLNIGEYVKHNV 418
L R +F ++R N Y++ +V
Sbjct: 303 LLTRMLDSKFSEYMRTYFNKKSYLEKHV 330
Database: nr
Posted date: Aug 27, 2003 10:37 AM
Number of letters in database: 485,782,529
Number of sequences in database: 1,508,275
Lambda K H
0.321 0.136 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,056,064,680
Number of Sequences: 1508275
Number of extensions: 47006005
Number of successful extensions: 100602
Number of sequences better than 1.0e-04: 45
Number of HSP's better than 0.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 100263
Number of HSP's gapped (non-prelim): 116
length of query: 1058
length of database: 485,782,529
effective HSP length: 134
effective length of query: 924
effective length of database: 283,673,679
effective search space: 262114479396
effective search space used: 262114479396
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 122 (51.6 bits)