BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= AA01793
(385 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|152979354|ref|YP_001344983.1| SAM-dependent methyltransf... 596 e-169
gi|15602433|ref|NP_245505.1| hypothetical protein PM0568 [P... 589 e-166
gi|52424949|ref|YP_088086.1| hypothetical protein MS0894 [M... 578 e-163
gi|113460641|ref|YP_718707.1| possible SAM-dependent methyl... 576 e-163
gi|1574124|gb|AAC22849.1| conserved hypothetical protein [H... 573 e-162
gi|148828345|ref|YP_001293098.1| SAM-dependent methyltransf... 573 e-162
gi|16273647|ref|NP_439351.1| SAM-dependent methyltransferas... 572 e-161
gi|42631497|ref|ZP_00157035.1| COG2933: Predicted SAM-depen... 570 e-161
gi|68249741|ref|YP_248853.1| predicted SAM-dependent methyl... 569 e-160
gi|145641205|ref|ZP_01796785.1| SAM-dependent methyltransfe... 568 e-160
gi|145633075|ref|ZP_01788807.1| SAM-dependent methyltransfe... 567 e-160
gi|32029385|ref|ZP_00132418.1| COG2933: Predicted SAM-depen... 566 e-160
gi|145635044|ref|ZP_01790750.1| SAM-dependent methyltransfe... 565 e-159
gi|53732461|ref|ZP_00349488.1| COG2933: Predicted SAM-depen... 563 e-159
gi|148826196|ref|YP_001290949.1| SAM-dependent methyltransf... 563 e-159
gi|153094569|gb|EDN75386.1| possible methyltransferase [Man... 540 e-152
gi|53729187|ref|ZP_00134032.2| COG2933: Predicted SAM-depen... 537 e-151
gi|84029353|sp|Q7VLM7|MTFA_HAEDU Putative RNA 2'-O-ribose m... 531 e-149
gi|33152466|ref|NP_873819.1| hypothetical protein HD1396 [H... 495 e-138
gi|145639285|ref|ZP_01794891.1| predicted methyltransferase... 445 e-123
gi|156932717|ref|YP_001436633.1| hypothetical protein ESA_0... 443 e-123
gi|157085556|gb|ABV15234.1| hypothetical protein CKO_04169 ... 440 e-122
gi|37524655|ref|NP_927999.1| hypothetical protein plu0654 [... 438 e-121
gi|82545104|ref|YP_409051.1| hypothetical protein SBO_2689 ... 438 e-121
gi|74313377|ref|YP_311796.1| hypothetical protein SSON_2963... 437 e-121
gi|24114090|ref|NP_708600.1| hypothetical protein SF2820 [S... 437 e-121
gi|15832920|ref|NP_311693.1| hypothetical protein ECs3666 [... 436 e-120
gi|26249211|ref|NP_755251.1| Hypothetical protein ygdE [Esc... 435 e-120
gi|75369995|sp|Q6QNZ6|MTFA_PHOAZ Putative RNA 2'-O-ribose m... 435 e-120
gi|75241804|ref|ZP_00725623.1| COG2933: Predicted SAM-depen... 435 e-120
gi|82778185|ref|YP_404534.1| hypothetical protein SDY_3024 ... 434 e-120
gi|50119957|ref|YP_049124.1| hypothetical protein ECA1017 [... 434 e-120
gi|118070141|ref|ZP_01538376.1| conserved hypothetical prot... 434 e-120
gi|15803328|ref|NP_289361.1| hypothetical protein Z4123 [Es... 434 e-120
gi|146312893|ref|YP_001177967.1| hypothetical protein Ent63... 434 e-120
gi|75233968|ref|ZP_00718417.1| COG2933: Predicted SAM-depen... 434 e-120
gi|77632951|ref|ZP_00795116.1| COG2933: Predicted SAM-depen... 434 e-120
gi|16121331|ref|NP_404644.1| hypothetical protein YPO1031 [... 433 e-120
gi|123443499|ref|YP_001007472.1| hypothetical protein YE329... 433 e-119
gi|77972697|ref|ZP_00828256.1| COG2933: Predicted SAM-depen... 432 e-119
gi|91212175|ref|YP_542161.1| hypothetical protein YgdE [Esc... 432 e-119
gi|152971679|ref|YP_001336788.1| putative RNA 2'-O-ribose m... 431 e-119
gi|77963188|ref|ZP_00827000.1| COG2933: Predicted SAM-depen... 430 e-119
gi|77956218|ref|ZP_00820340.1| COG2933: Predicted SAM-depen... 429 e-118
gi|37679065|ref|NP_933674.1| predicted SAM-dependent methyl... 428 e-118
gi|16761758|ref|NP_457375.1| hypothetical protein STY3120 [... 427 e-118
gi|62181490|ref|YP_217907.1| putative SAM-dependent methylt... 427 e-118
gi|77977760|ref|ZP_00833201.1| COG2933: Predicted SAM-depen... 427 e-118
gi|56414929|ref|YP_152004.1| hypothetical protein SPA2844 [... 427 e-118
gi|116183995|ref|ZP_01473950.1| hypothetical protein VEx2w_... 424 e-117
gi|27363781|ref|NP_759309.1| Predicted SAM-dependent methyl... 424 e-117
gi|59711200|ref|YP_203976.1| methyltransferase [Vibrio fisc... 421 e-116
gi|90580952|ref|ZP_01236753.1| putative SAM-dependent methy... 417 e-115
gi|156973495|ref|YP_001444402.1| hypothetical protein VIBHA... 416 e-114
gi|89075439|ref|ZP_01161856.1| putative SAM-dependent methy... 415 e-114
gi|90407668|ref|ZP_01215848.1| predicted SAM-dependent meth... 411 e-113
gi|86146931|ref|ZP_01065250.1| hypothetical protein MED222_... 410 e-112
gi|84394483|ref|ZP_00993196.1| hypothetical protein V12B01_... 409 e-112
gi|54310103|ref|YP_131123.1| putative SAM-dependentmethyltr... 407 e-112
gi|28897469|ref|NP_797074.1| hypothetical protein VP0695 [V... 407 e-112
gi|90413507|ref|ZP_01221498.1| putative SAM-dependentmethyl... 407 e-112
gi|85059932|ref|YP_455634.1| hypothetical protein SG1954 [S... 407 e-112
gi|84029358|sp|Q87RT2|MTFA_VIBPA Putative RNA 2'-O-ribose m... 404 e-111
gi|149192513|ref|ZP_01870694.1| predicted methyltransferase... 400 e-110
gi|127513689|ref|YP_001094886.1| hypothetical protein Shew_... 397 e-109
gi|119945329|ref|YP_943009.1| methyltransferase [Psychromon... 394 e-108
gi|120599618|ref|YP_964192.1| hypothetical protein Sputw318... 394 e-108
gi|124545113|ref|ZP_01704340.1| conserved hypothetical prot... 393 e-108
gi|146292388|ref|YP_001182812.1| hypothetical protein Sputc... 393 e-108
gi|113948413|ref|ZP_01434073.1| conserved hypothetical prot... 393 e-107
gi|126173605|ref|YP_001049754.1| hypothetical protein Sbal_... 392 e-107
gi|118754391|ref|ZP_01602188.1| conserved hypothetical prot... 389 e-106
gi|24373109|ref|NP_717152.1| hypothetical protein SO_1536 [... 388 e-106
gi|119775560|ref|YP_928300.1| hypothetical protein Sama_242... 388 e-106
gi|118073219|ref|ZP_01541402.1| conserved hypothetical prot... 387 e-106
gi|91793913|ref|YP_563564.1| hypothetical protein Sden_2562... 385 e-105
gi|114048284|ref|YP_738834.1| hypothetical protein Shewmr7_... 385 e-105
gi|113971056|ref|YP_734849.1| hypothetical protein Shewmr4_... 382 e-104
gi|117921332|ref|YP_870524.1| hypothetical protein Shewana3... 382 e-104
gi|114563945|ref|YP_751459.1| hypothetical protein Sfri_278... 382 e-104
gi|149907574|ref|ZP_01896321.1| hypothetical protein PE36_0... 377 e-103
gi|150381523|ref|ZP_01920525.1| conserved hypothetical prot... 376 e-102
gi|88861354|ref|ZP_01135984.1| RNA 2'-O-ribose methyltransf... 375 e-102
gi|119472542|ref|ZP_01614590.1| predicted methyltransferase... 373 e-101
gi|117619180|ref|YP_855691.1| methyltransferase [Aeromonas ... 372 e-101
gi|145300085|ref|YP_001142926.1| hypothetical protein ASA_3... 367 e-100
gi|109898517|ref|YP_661772.1| hypothetical protein Patl_220... 365 3e-99
gi|77360010|ref|YP_339585.1| RNA 2'-O-ribose methyltransfer... 364 4e-99
gi|28395573|gb|AAO39137.1| SAM-dependent methyltransferase-... 350 1e-94
gi|56459970|ref|YP_155251.1| SAM-dependent methyltransferas... 348 3e-94
gi|85712013|ref|ZP_01043067.1| SAM-dependent methyltransfer... 344 5e-93
gi|152995954|ref|YP_001340789.1| hypothetical protein Mmwyl... 342 2e-92
gi|71280266|ref|YP_270215.1| hypothetical protein CPS_3541 ... 340 6e-92
gi|92114530|ref|YP_574458.1| conserved hypothetical HI1195 ... 335 4e-90
gi|87120481|ref|ZP_01076375.1| hypothetical protein MED121_... 332 2e-89
gi|114773551|ref|ZP_01450649.1| predicted SAM-dependent met... 326 1e-87
gi|89093178|ref|ZP_01166128.1| hypothetical protein MED92_0... 320 1e-85
gi|53802683|ref|YP_112631.1| hypothetical protein MCA0092 [... 317 9e-85
gi|88796070|ref|ZP_01111754.1| hypothetical protein MADE_18... 314 6e-84
gi|26988837|ref|NP_744262.1| hypothetical protein PP_2113 [... 311 6e-83
gi|145637051|ref|ZP_01792714.1| predicted methyltransferase... 311 6e-83
gi|148548832|ref|YP_001268934.1| SAM-dependent methyltransf... 309 2e-82
gi|126356693|ref|ZP_01713697.1| conserved hypothetical prot... 308 3e-82
gi|67157258|ref|ZP_00418560.1| conserved hypothetical prote... 308 5e-82
gi|146282210|ref|YP_001172363.1| predicted SAM-dependent me... 307 7e-82
gi|119897300|ref|YP_932513.1| hypothetical protein azo1009 ... 306 1e-81
gi|104782760|ref|YP_609258.1| hypothetical protein PSEEN375... 306 1e-81
gi|148979787|ref|ZP_01815694.1| predicted methyltransferase... 305 2e-81
gi|145627823|ref|ZP_01783624.1| transcriptional regulator C... 305 4e-81
gi|145631245|ref|ZP_01787018.1| SAM-dependent methyltransfe... 304 6e-81
gi|28869221|ref|NP_791840.1| hypothetical protein PSPTO_201... 303 2e-80
gi|66046632|ref|YP_236473.1| hypothetical protein Psyr_3403... 301 4e-80
gi|119859944|ref|ZP_01641352.1| conserved hypothetical prot... 301 4e-80
gi|77460110|ref|YP_349617.1| hypothetical protein Pfl_3889 ... 300 7e-80
gi|71735327|ref|YP_275483.1| hypothetical protein PSPPH_332... 300 1e-79
gi|56477992|ref|YP_159581.1| predicted SAM-dependent methyl... 296 2e-78
gi|70729312|ref|YP_259049.1| hypothetical protein PFL_1930 ... 295 3e-78
gi|91228737|ref|ZP_01262649.1| hypothetical protein V12G01_... 290 1e-76
gi|146306933|ref|YP_001187398.1| SAM-dependent methyltransf... 288 4e-76
gi|90020800|ref|YP_526627.1| hypothetical protein Sde_1153 ... 287 9e-76
gi|88800212|ref|ZP_01115780.1| hypothetical protein MED297_... 286 2e-75
gi|58427938|gb|AAW76975.1| conserved hypothetical protein [... 286 2e-75
gi|122879286|ref|YP_202360.6| hypothetical protein XOO3721 ... 285 2e-75
gi|94499100|ref|ZP_01305638.1| hypothetical protein RED65_0... 285 3e-75
gi|78046480|ref|YP_362655.1| hypothetical protein XCV0924 [... 285 4e-75
gi|15596760|ref|NP_250254.1| hypothetical protein PA1563 [P... 283 1e-74
gi|116049506|ref|YP_791690.1| putative SAM-dependent methyl... 283 1e-74
gi|84625171|ref|YP_452543.1| hypothetical protein XOO_3514 ... 283 2e-74
gi|21241659|ref|NP_641241.1| hypothetical protein XAC0889 [... 283 2e-74
gi|21230290|ref|NP_636207.1| hypothetical protein XCC0816 [... 282 2e-74
gi|152986204|ref|YP_001349121.1| hypothetical protein PSPA7... 279 2e-73
gi|119879258|ref|ZP_01646029.1| conserved hypothetical prot... 277 8e-73
gi|149376360|ref|ZP_01894123.1| predicted methyltransferase... 276 2e-72
gi|15837350|ref|NP_298038.1| hypothetical protein XF0748 [X... 267 1e-69
gi|71275159|ref|ZP_00651446.1| conserved hypothetical prote... 265 3e-69
gi|145637052|ref|ZP_01792715.1| predicted SAM-dependent met... 264 9e-69
gi|71901130|ref|ZP_00683236.1| conserved hypothetical prote... 263 1e-68
gi|28199774|ref|NP_780088.1| hypothetical protein PD1906 [X... 260 8e-68
gi|145631244|ref|ZP_01787017.1| predicted methyltransferase... 259 2e-67
gi|120554699|ref|YP_959050.1| hypothetical protein Maqu_178... 259 2e-67
gi|145627824|ref|ZP_01783625.1| predicted SAM-dependent met... 258 5e-67
gi|114320646|ref|YP_742329.1| hypothetical protein Mlg_1490... 239 2e-61
gi|121998440|ref|YP_001003227.1| hypothetical protein Hhal_... 236 1e-60
gi|83645093|ref|YP_433528.1| predicted SAM-dependent methyl... 230 1e-58
gi|110834423|ref|YP_693282.1| hypothetical protein ABO_1562... 213 2e-53
gi|115378609|ref|ZP_01465762.1| SAM-dependent methyltransfe... 123 3e-26
gi|108758667|ref|YP_633496.1| hypothetical protein MXAN_534... 121 8e-26
gi|153891256|ref|ZP_02012284.1| SAM-dependent methyltransfe... 114 2e-23
gi|145639286|ref|ZP_01794892.1| predicted SAM-dependent met... 113 2e-23
gi|125571168|gb|EAZ12683.1| hypothetical protein OsJ_002508... 100 2e-19
gi|94986770|ref|YP_594703.1| predicted SAM-dependent methyl... 89 5e-16
gi|77869486|gb|ABB05182.1| SAM-dependent methyltransferase-... 87 2e-15
gi|42522232|ref|NP_967612.1| methyltransferase [Bdellovibri... 79 5e-13
gi|46201060|ref|ZP_00207948.1| COG2933: Predicted SAM-depen... 79 6e-13
gi|78355354|ref|YP_386803.1| hypothetical protein Dde_0307 ... 78 8e-13
gi|83313194|ref|YP_423458.1| Predicted SAM-dependent methyl... 76 4e-12
gi|42528041|ref|NP_973139.1| hypothetical protein TDE2541 [... 73 2e-11
gi|120601354|ref|YP_965754.1| hypothetical protein Dvul_030... 73 3e-11
gi|46581476|ref|YP_012284.1| hypothetical protein DVU3073 [... 72 4e-11
gi|54293591|ref|YP_126006.1| hypothetical protein lpl0643 [... 68 8e-10
gi|144900262|emb|CAM77126.1| hypothetical SAM-dependent met... 67 2e-09
gi|148360742|ref|YP_001251949.1| hypothetical SAM-dependent... 65 6e-09
gi|52840845|ref|YP_094644.1| hypothetical SAM-dependent met... 65 6e-09
gi|66815485|ref|XP_641759.1| hypothetical protein DDBDRAFT_... 60 2e-07
gi|86609471|ref|YP_478233.1| hypothetical protein CYB_2023 ... 60 2e-07
gi|86606840|ref|YP_475603.1| ribosomal RNA large subunit me... 58 8e-07
>gi|152979354|ref|YP_001344983.1| SAM-dependent methyltransferase [Actinobacillus succinogenes 130Z]
gi|150841077|gb|ABR75048.1| SAM-dependent methyltransferase [Actinobacillus succinogenes 130Z]
Length = 364
Score = 596 bits (1536), Expect = e-169, Method: Composition-based stats.
Identities = 275/360 (76%), Positives = 314/360 (87%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR+GFE+E+AAEITD AAE+GVFGFAR+ EN+GYVIFECYQPG+AD LARE+P
Sbjct: 1 MNKLALYCRIGFEKEVAAEITDTAAERGVFGFARIQENAGYVIFECYQPGEADRLAREIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F QLIFARQ++VVSDLL +LP DRITPI+ +YQ+++ + L+ SSELWVETADTNEAKE
Sbjct: 61 FTQLIFARQLVVVSDLLQNLPTTDRITPILQKYQEVSPHLKLQQSSELWVETADTNEAKE 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQALKKQGWLN K + G+TLH F+R++ACY GYSYN NHS + MG
Sbjct: 121 LSAFCRKFTVPLRQALKKQGWLNFKQIKDSGMTLHCLFVRSDACYAGYSYNRNHSPYFMG 180
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP EAPSRSTLKLEEAILTFI R +E + LNE M VDLGACPGGWTYQLVKRGL
Sbjct: 181 IPRLKFPTEAPSRSTLKLEEAILTFIPREEESKRLNENMIGVDLGACPGGWTYQLVKRGL 240
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FVYAVDHGKMAASLHETGRIEHC+EDGFKFQPPKR+K DWLVCDMVEQP RI L+ KWL
Sbjct: 241 FVYAVDHGKMAASLHETGRIEHCSEDGFKFQPPKRKKADWLVCDMVEQPGRIVALIGKWL 300
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
N WCH IFNLKLPMKKRY +V++CLQ +AD+L+Q GLK+R+QAKHLYHDREEITV++R
Sbjct: 301 SNEWCHETIFNLKLPMKKRYTEVRRCLQKLADELTQSGLKFRMQAKHLYHDREEITVHVR 360
>gi|15602433|ref|NP_245505.1| hypothetical protein PM0568 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|81637106|sp|Q9CN71|MTFA_PASMU Putative RNA 2'-O-ribose methyltransferase mtfA
gi|12720835|gb|AAK02652.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 365
Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats.
Identities = 277/359 (77%), Positives = 310/359 (86%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+ELAAEI++KAAE G+FGFAR+ EN GYVIFECYQ DAD LARE+P
Sbjct: 1 MNKLALYCRPGFEKELAAEISEKAAELGIFGFARVEENQGYVIFECYQTDDADRLAREIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F QLIFARQM+VVSDLLTDLP QDRI+PI+ QYQ IA I L S+EL VETADTNEAK
Sbjct: 61 FNQLIFARQMIVVSDLLTDLPVQDRISPIIQQYQAIAHQINLTYSTELLVETADTNEAKS 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQALKKQGWL + K GLTLH+ L + CYVGYSYN+NHS H MG
Sbjct: 121 LSAFCRKFTVPLRQALKKQGWLQGTRHHKQGLTLHILMLDSTQCYVGYSYNYNHSEHFMG 180
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP +APSRSTLKLEEAILTF+SR +E + LNE MYAVDLGACPGGWTYQLVKRGL
Sbjct: 181 IPRLKFPLDAPSRSTLKLEEAILTFLSREEEKKRLNEQMYAVDLGACPGGWTYQLVKRGL 240
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FVYAVDHGKMAASLH+TGRIEHCAEDGFKFQPPKR KIDWLVCDMVEQPSRI++L+ KWL
Sbjct: 241 FVYAVDHGKMAASLHDTGRIEHCAEDGFKFQPPKRSKIDWLVCDMVEQPSRISQLILKWL 300
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYL 382
+NGWCH IFNLKLPMKKRY +V++CLQ+I + L +QG +Y +QAKHLYHDREEITV++
Sbjct: 301 VNGWCHETIFNLKLPMKKRYLEVKKCLQMIEESLEKQGFRYHIQAKHLYHDREEITVHI 359
>gi|52424949|ref|YP_088086.1| hypothetical protein MS0894 [Mannheimia succiniciproducens MBEL55E]
gi|81387245|sp|Q65U59|MTFA_MANSM Putative RNA 2'-O-ribose methyltransferase mtfA
gi|52307001|gb|AAU37501.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 363
Score = 578 bits (1489), Expect = e-163, Method: Composition-based stats.
Identities = 267/361 (73%), Positives = 309/361 (85%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR+GFE+E AAEIT+KAAEKGVFGFAR+ +SGYVIFECYQ G+AD LARE+P
Sbjct: 1 MNKLALYCRIGFEKETAAEITEKAAEKGVFGFARVNNDSGYVIFECYQEGEADRLAREIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F QLIFARQM+V+SDLL +LP DRITPI+ +Y +I + L ++EL+VETADTNEAKE
Sbjct: 61 FNQLIFARQMIVISDLLENLPPTDRITPIIEEYNRIGSLVNLHRTTELFVETADTNEAKE 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQALKKQG+L K +K GLTLH+FF++ N CYVGYSYN+NHS + MG
Sbjct: 121 LSVFCRKFTVPLRQALKKQGYLAFKEVKKSGLTLHIFFVKPNCCYVGYSYNNNHSPNFMG 180
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP +APSRSTLKL EAILTF+S +E + +NE+MY VDLGACPGGWTYQLVKRGL
Sbjct: 181 ILRLKFPPQAPSRSTLKLHEAILTFLSPEEERKCMNESMYGVDLGACPGGWTYQLVKRGL 240
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FVYAVDHGKMAASLH+TGRI+HC EDGFKFQPPKR KIDWLVCDMVEQP RIA L+ KWL
Sbjct: 241 FVYAVDHGKMAASLHDTGRIDHCPEDGFKFQPPKRSKIDWLVCDMVEQPIRIAALIAKWL 300
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+N WC IFNLKLPMKKRYA+VQ CLQLI ++L + G KY +QAKHLYHDREEITV++
Sbjct: 301 VNEWCRESIFNLKLPMKKRYAEVQNCLQLITNELDKAGFKYHIQAKHLYHDREEITVHIS 360
Query: 384 L 384
+
Sbjct: 361 V 361
>gi|113460641|ref|YP_718707.1| possible SAM-dependent methyltransferase [Haemophilus somnus 129PT]
gi|112822684|gb|ABI24773.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 361
Score = 576 bits (1484), Expect = e-163, Method: Composition-based stats.
Identities = 267/362 (73%), Positives = 313/362 (86%), Gaps = 1/362 (0%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+ELAAEIT+KA GVFGFAR+ ENSGYVIFECYQ G+ADLLAR++
Sbjct: 1 MNKLALYCRSGFEKELAAEITEKATALGVFGFARVVENSGYVIFECYQIGEADLLARKIT 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F QLIFARQ++VVSDL+++L QDRI+PI+ Y+Q + LK SS++WVETADTNEAK
Sbjct: 61 FSQLIFARQLIVVSDLISNLSVQDRISPIIEYYRQQEKILNLKQSSDIWVETADTNEAKT 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQAL+KQGWL AK N+K G+TLH+FF ++N+CY+GYSYN+NH+ H+MG
Sbjct: 121 LAAFCRKFTVPLRQALRKQGWLQAK-NKKSGITLHIFFTQSNSCYIGYSYNNNHAEHIMG 179
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPAEAPSRSTLKLEEAIL FI +QE NE YAVDLGACPGGWTYQLV+RG+
Sbjct: 180 IPRLKFPAEAPSRSTLKLEEAILYFIPPNQEATRFNENKYAVDLGACPGGWTYQLVRRGV 239
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FVYAVDHGKMA SLHETGRIEHCAEDGFKF+PPK KIDWLVCDMVEQP RIA+L+++WL
Sbjct: 240 FVYAVDHGKMATSLHETGRIEHCAEDGFKFRPPKHCKIDWLVCDMVEQPRRIADLISQWL 299
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+ GWC IFNLKLPMKKRY +VQQCL+ I DKL++Q + ++LQAKHLYHDREEITVY+R
Sbjct: 300 VKGWCKETIFNLKLPMKKRYFEVQQCLRQIEDKLNKQNISFQLQAKHLYHDREEITVYIR 359
Query: 384 LL 385
L+
Sbjct: 360 LM 361
>gi|1574124|gb|AAC22849.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
Length = 410
Score = 573 bits (1477), Expect = e-162, Method: Composition-based stats.
Identities = 268/363 (73%), Positives = 310/363 (85%)
Query: 22 KKMNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARE 81
KKMNKLALYCR GFE+E+AAEITD+A+ GVFGFAR+ +NSGYVIFECYQP +AD LAR+
Sbjct: 46 KKMNKLALYCRPGFEKEVAAEITDQASHLGVFGFARVQDNSGYVIFECYQPDEADRLARD 105
Query: 82 LPFQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEA 141
+PF +LIFARQM+V+SDLL DL DRI+PIV +++++ + SSEL+VETADTNEA
Sbjct: 106 IPFNRLIFARQMMVISDLLEDLDPADRISPIVVAFEELSQQVNFAQSSELFVETADTNEA 165
Query: 142 KELLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHL 201
KEL FCRKFTVPLRQALKKQGWL+AK +QKCG LH FF++ N CYVGYSY NHS+H
Sbjct: 166 KELSTFCRKFTVPLRQALKKQGWLSAKASQKCGQFLHCFFVKPNCCYVGYSYVDNHSSHF 225
Query: 202 MGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKR 261
MGI RLKFPA+APSRSTLKLEEAILTFI R +E + LNE M VDLGACPGGWTYQLVKR
Sbjct: 226 MGIPRLKFPADAPSRSTLKLEEAILTFIPRKEENKRLNENMIGVDLGACPGGWTYQLVKR 285
Query: 262 GLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTK 321
GLFVYAVDHGKMAASLH+TGRIEHCAEDGFKFQPPKR+K+DWLVCDMVEQPSRI+ L+ K
Sbjct: 286 GLFVYAVDHGKMAASLHDTGRIEHCAEDGFKFQPPKRKKVDWLVCDMVEQPSRISLLIGK 345
Query: 322 WLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVY 381
WLLNGWC IFNLKLPMKKRY +V CL+ +A L++Q L + +QAKHLYHDREEITV+
Sbjct: 346 WLLNGWCRETIFNLKLPMKKRYQEVILCLENLAVMLAEQNLNFDIQAKHLYHDREEITVH 405
Query: 382 LRL 384
+ L
Sbjct: 406 IAL 408
>gi|148828345|ref|YP_001293098.1| SAM-dependent methyltransferase [Haemophilus influenzae PittGG]
gi|148719587|gb|ABR00715.1| SAM-dependent methyltransferase [Haemophilus influenzae PittGG]
Length = 363
Score = 573 bits (1476), Expect = e-162, Method: Composition-based stats.
Identities = 265/361 (73%), Positives = 308/361 (85%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+E+AAEITD+A+ GVFGFAR+ +NSGYVIFECYQP +AD LAR++P
Sbjct: 1 MNKLALYCRPGFEKEVAAEITDQASHLGVFGFARVQDNSGYVIFECYQPDEADRLARDIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIFARQM+V+SDLL DL DRI+PIV +++++ + SSEL+VETADTNEAKE
Sbjct: 61 FNRLIFARQMIVISDLLEDLDPADRISPIVAAFEELSQQVNFAQSSELFVETADTNEAKE 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQALKKQGWL+AK +QKCG LH FF++ N CYVGYSY NHS+H MG
Sbjct: 121 LSTFCRKFTVPLRQALKKQGWLSAKASQKCGQFLHCFFVKPNCCYVGYSYVDNHSSHFMG 180
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEAILTFI R +E + LNE M VDLGACPGGWTYQLVKRGL
Sbjct: 181 IPRLKFPADAPSRSTLKLEEAILTFIPRKEENKRLNENMIGVDLGACPGGWTYQLVKRGL 240
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FVYAVDHGKMAA+LH+TGRIEHCAEDGFKFQPPKR+K+DWLVCDMVEQPSRI+ L+ KWL
Sbjct: 241 FVYAVDHGKMAANLHDTGRIEHCAEDGFKFQPPKRKKVDWLVCDMVEQPSRISSLIGKWL 300
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
LNGWC IFNLKLPMKKRY +V CL+ +A L++Q L + +QAKHLYHDREEITV++
Sbjct: 301 LNGWCRETIFNLKLPMKKRYQEVILCLENLAVMLAEQNLNFEIQAKHLYHDREEITVHIA 360
Query: 384 L 384
L
Sbjct: 361 L 361
>gi|16273647|ref|NP_439351.1| SAM-dependent methyltransferase [Haemophilus influenzae Rd KW20]
gi|1176087|sp|P45100|MTFA_HAEIN Putative RNA 2'-O-ribose methyltransferase mtfA
Length = 363
Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats.
Identities = 266/361 (73%), Positives = 308/361 (85%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+E+AAEITD+A+ GVFGFAR+ +NSGYVIFECYQP +AD LAR++P
Sbjct: 1 MNKLALYCRPGFEKEVAAEITDQASHLGVFGFARVQDNSGYVIFECYQPDEADRLARDIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIFARQM+V+SDLL DL DRI+PIV +++++ + SSEL+VETADTNEAKE
Sbjct: 61 FNRLIFARQMMVISDLLEDLDPADRISPIVVAFEELSQQVNFAQSSELFVETADTNEAKE 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQALKKQGWL+AK +QKCG LH FF++ N CYVGYSY NHS+H MG
Sbjct: 121 LSTFCRKFTVPLRQALKKQGWLSAKASQKCGQFLHCFFVKPNCCYVGYSYVDNHSSHFMG 180
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEAILTFI R +E + LNE M VDLGACPGGWTYQLVKRGL
Sbjct: 181 IPRLKFPADAPSRSTLKLEEAILTFIPRKEENKRLNENMIGVDLGACPGGWTYQLVKRGL 240
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FVYAVDHGKMAASLH+TGRIEHCAEDGFKFQPPKR+K+DWLVCDMVEQPSRI+ L+ KWL
Sbjct: 241 FVYAVDHGKMAASLHDTGRIEHCAEDGFKFQPPKRKKVDWLVCDMVEQPSRISLLIGKWL 300
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
LNGWC IFNLKLPMKKRY +V CL+ +A L++Q L + +QAKHLYHDREEITV++
Sbjct: 301 LNGWCRETIFNLKLPMKKRYQEVILCLENLAVMLAEQNLNFDIQAKHLYHDREEITVHIA 360
Query: 384 L 384
L
Sbjct: 361 L 361
>gi|42631497|ref|ZP_00157035.1| COG2933: Predicted SAM-dependent methyltransferase [Haemophilus
influenzae R2866]
Length = 363
Score = 570 bits (1470), Expect = e-161, Method: Composition-based stats.
Identities = 265/361 (73%), Positives = 307/361 (85%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+E+AAEITD+A+ GVFGFAR+ +NSGYVIFECYQP +AD LAR++P
Sbjct: 1 MNKLALYCRPGFEKEVAAEITDQASHLGVFGFARVQDNSGYVIFECYQPDEADRLARDIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIFARQM+V+SDLL DL DRI+PIV +++++ + SSEL+VETADTNEAKE
Sbjct: 61 FNRLIFARQMMVISDLLEDLDPADRISPIVVAFEELSQQVNFAQSSELFVETADTNEAKE 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQALKKQGWL+AK +QKCG LH FF++ N CYVGYSY NHS+H MG
Sbjct: 121 LSTFCRKFTVPLRQALKKQGWLSAKASQKCGQFLHCFFVKPNCCYVGYSYVDNHSSHFMG 180
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEAILTFI R +E + LNE M VDLGACPGGWTYQLVKRGL
Sbjct: 181 IPRLKFPADAPSRSTLKLEEAILTFIPRKEENKRLNENMIGVDLGACPGGWTYQLVKRGL 240
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FVYAVDHGKMAASLH+TGRIEHCAEDGF FQPPKR+K+DWLVCDMVEQPSRI+ L+ KWL
Sbjct: 241 FVYAVDHGKMAASLHDTGRIEHCAEDGFTFQPPKRKKVDWLVCDMVEQPSRISLLIGKWL 300
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
LNGWC IFNLKLPMKKRY +V CL+ +A L++Q L + +QAKHLYHDREEITV++
Sbjct: 301 LNGWCRETIFNLKLPMKKRYQEVILCLENLAVMLAEQNLNFDIQAKHLYHDREEITVHIA 360
Query: 384 L 384
L
Sbjct: 361 L 361
>gi|68249741|ref|YP_248853.1| predicted SAM-dependent methyltransferase [Haemophilus influenzae
86-028NP]
gi|81335830|sp|Q4QLA4|MTFA_HAEI8 Putative RNA 2'-O-ribose methyltransferase mtfA
gi|68057940|gb|AAX88193.1| predicted SAM-dependent methyltransferase [Haemophilus influenzae
86-028NP]
Length = 363
Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats.
Identities = 265/361 (73%), Positives = 307/361 (85%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+E+AAEITD+A+ GVFGFAR+ +NSGYVIFECYQP +AD LAR++P
Sbjct: 1 MNKLALYCRPGFEKEVAAEITDQASHLGVFGFARVQDNSGYVIFECYQPDEADRLARDIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIFARQM+V+SDLL DL DRI+PIV +++++ + SSEL+VETADTNEAKE
Sbjct: 61 FNRLIFARQMMVISDLLEDLDPADRISPIVAAFEELSQQVNFAQSSELFVETADTNEAKE 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQALKKQGWL+AK +QKCG LH FF++ N CYVGYSY NHS+H MG
Sbjct: 121 LSTFCRKFTVPLRQALKKQGWLSAKASQKCGQFLHCFFVKPNCCYVGYSYVDNHSSHFMG 180
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEAILTFI R +E + LNE M VDLGACPGGWTYQLVKRGL
Sbjct: 181 IPRLKFPADAPSRSTLKLEEAILTFIPRKEENKRLNENMIGVDLGACPGGWTYQLVKRGL 240
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FVYAVDHGKMAASLH+TG IEHCAEDGFKFQPPKR+K+DWLVCDMVEQPSRI+ L+ KWL
Sbjct: 241 FVYAVDHGKMAASLHDTGCIEHCAEDGFKFQPPKRKKVDWLVCDMVEQPSRISLLIGKWL 300
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
LNGWC IFNLKLPMKKRY +V CL+ +A L++Q L + +QAKHLYHDREEITV++
Sbjct: 301 LNGWCRETIFNLKLPMKKRYQEVILCLENLAVMLAEQNLNFDIQAKHLYHDREEITVHIA 360
Query: 384 L 384
L
Sbjct: 361 L 361
>gi|145641205|ref|ZP_01796785.1| SAM-dependent methyltransferase [Haemophilus influenzae R3021]
gi|145274042|gb|EDK13908.1| SAM-dependent methyltransferase [Haemophilus influenzae 22.4-21]
Length = 363
Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats.
Identities = 264/361 (73%), Positives = 306/361 (84%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+E+AAEITD+A+ GVFGFAR+ +NSGYVIFECYQP +AD LAR++P
Sbjct: 1 MNKLALYCRPGFEKEVAAEITDQASHLGVFGFARVQDNSGYVIFECYQPDEADRLARDIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIFARQM+V+SDLL DL DRI+PIV +++++ + SSEL+VETADTNEAKE
Sbjct: 61 FNRLIFARQMMVISDLLEDLDPADRISPIVTAFEELSQQVNFAQSSELFVETADTNEAKE 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQALKKQGWL+AK +QKCG LH FF++ N CYVGYSY NHS H MG
Sbjct: 121 LSTFCRKFTVPLRQALKKQGWLSAKASQKCGQFLHCFFVKPNCCYVGYSYVDNHSPHFMG 180
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEAILTFI R +E + LNE M VDLGACPGGWTYQLVKRGL
Sbjct: 181 IPRLKFPADAPSRSTLKLEEAILTFIPRKEENKRLNENMIGVDLGACPGGWTYQLVKRGL 240
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FVYAVDHGKMAASLH+TGRIEHCAEDGFKFQPPKR+K+DWLVCDMVEQPSRI+ L+ +WL
Sbjct: 241 FVYAVDHGKMAASLHDTGRIEHCAEDGFKFQPPKRKKVDWLVCDMVEQPSRISLLIGRWL 300
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
LN WC IFNLKLPMKKRY +V CL+ +A L++Q L + +QAKHLYHDREEITV++
Sbjct: 301 LNAWCRETIFNLKLPMKKRYQEVILCLENLAVMLAEQNLNFEIQAKHLYHDREEITVHIA 360
Query: 384 L 384
L
Sbjct: 361 L 361
>gi|145633075|ref|ZP_01788807.1| SAM-dependent methyltransferase [Haemophilus influenzae 3655]
gi|144986301|gb|EDJ92880.1| SAM-dependent methyltransferase [Haemophilus influenzae 3655]
Length = 363
Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats.
Identities = 266/361 (73%), Positives = 303/361 (83%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+E+AAEITD+A+ GVFGFAR+ +NSGYVIFECYQP +A LARE+P
Sbjct: 1 MNKLALYCRPGFEKEVAAEITDQASNLGVFGFARVQDNSGYVIFECYQPDEAARLAREIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIFARQM+V+SDLL DL DRI+PIV ++ + + SSEL+VETADTNEAKE
Sbjct: 61 FNRLIFARQMIVISDLLEDLDPADRISPIVEAFEALLQQVNFAQSSELFVETADTNEAKE 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQALKKQGWL+AK QKCG LH FF++ N CYVGYSY NHS H MG
Sbjct: 121 LSTFCRKFTVPLRQALKKQGWLSAKATQKCGQFLHCFFVKPNCCYVGYSYVDNHSPHFMG 180
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEAILTFI R +E + LNE M VDLGACPGGWTYQLVKRGL
Sbjct: 181 IPRLKFPADAPSRSTLKLEEAILTFIPRKEENKRLNENMIGVDLGACPGGWTYQLVKRGL 240
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FVYAVDHGKMAASLH+TGRIEHCAEDGFKFQPPKR+K+DWLVCDMVEQPSRI+ L+ KWL
Sbjct: 241 FVYAVDHGKMAASLHDTGRIEHCAEDGFKFQPPKRKKVDWLVCDMVEQPSRISLLIGKWL 300
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
LNGWC IFNLKLPMKKRY +V CL+ +A L++Q L + +QAKHLYHDREEITV++
Sbjct: 301 LNGWCRETIFNLKLPMKKRYQEVILCLENLAVMLAEQNLNFDIQAKHLYHDREEITVHIA 360
Query: 384 L 384
L
Sbjct: 361 L 361
>gi|32029385|ref|ZP_00132418.1| COG2933: Predicted SAM-dependent methyltransferase [Haemophilus
somnus 2336]
Length = 361
Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats.
Identities = 261/362 (72%), Positives = 311/362 (85%), Gaps = 1/362 (0%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+ELAAEIT+KA GVFGFAR+ ENSGYVIFECYQ G+ADLLAR++
Sbjct: 1 MNKLALYCRSGFEKELAAEITEKATALGVFGFARVVENSGYVIFECYQIGEADLLARKIT 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F QLIFARQ++VVSDL+++L QDRI+PI+ Y+Q + LK SS++WVETADTNEAK
Sbjct: 61 FSQLIFARQLIVVSDLISNLSVQDRISPIIEYYRQQEKILNLKQSSDIWVETADTNEAKT 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
FCRKFTVPLRQA +KQGWL AK N+K G+TLH+FF ++N+CY+GYSYN+NH+ H+MG
Sbjct: 121 RAAFCRKFTVPLRQAFRKQGWLQAK-NKKSGITLHIFFTQSNSCYIGYSYNNNHAEHIMG 179
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPAEAPSRSTLKLEEAIL FI +QE NE YAVDLGACPGGWTYQLV+RG+
Sbjct: 180 IPRLKFPAEAPSRSTLKLEEAILYFIPPNQEATRFNENKYAVDLGACPGGWTYQLVRRGV 239
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FVYAVDHGKMA SLHETGRIEHCAEDGFKF+PPK KIDWLVCDMVEQP RIA+L+++WL
Sbjct: 240 FVYAVDHGKMATSLHETGRIEHCAEDGFKFRPPKHCKIDWLVCDMVEQPRRIADLISQWL 299
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+ GWC IFNLKLPMKKRY +V++CLQ I ++L++Q + +++QAKHLYHDREEITVY+R
Sbjct: 300 VKGWCKETIFNLKLPMKKRYFEVKRCLQQIKERLNEQHISFQIQAKHLYHDREEITVYIR 359
Query: 384 LL 385
L+
Sbjct: 360 LM 361
>gi|145635044|ref|ZP_01790750.1| SAM-dependent methyltransferase [Haemophilus influenzae PittAA]
gi|145267652|gb|EDK07650.1| SAM-dependent methyltransferase [Haemophilus influenzae PittAA]
Length = 363
Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats.
Identities = 264/361 (73%), Positives = 303/361 (83%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+E+AAEITD+A+ GVFGFAR+ +NSGYVIFECYQP +A LAR++P
Sbjct: 1 MNKLALYCRPGFEKEVAAEITDQASNLGVFGFARVQDNSGYVIFECYQPDEAAHLARDIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIF RQM+V+SDLL DL DRI+PIV ++ + + SSEL+VETADTNEAKE
Sbjct: 61 FNRLIFVRQMMVISDLLEDLDPADRISPIVAAFEALLQQVNFAQSSELFVETADTNEAKE 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQALKKQGWL+AK QKCG LH FF+++N CYVGYSY NHS H MG
Sbjct: 121 LSTFCRKFTVPLRQALKKQGWLSAKATQKCGQFLHCFFVKSNCCYVGYSYVDNHSPHFMG 180
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEAILTFI R +E + LNE M VDLGACPGGWTYQLVKRGL
Sbjct: 181 IPRLKFPADAPSRSTLKLEEAILTFIPRKEENKRLNENMIGVDLGACPGGWTYQLVKRGL 240
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FVYAVDHGKMAASLH+TGRIEHCAEDGFKFQPPKR+K+DWLVCDMVEQPSRI+ L+ KWL
Sbjct: 241 FVYAVDHGKMAASLHDTGRIEHCAEDGFKFQPPKRKKVDWLVCDMVEQPSRISLLIGKWL 300
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
LNGWC IFNLKLPMKKRY +V CL+ +A L++Q L + +QAKHLYHDREEITV++
Sbjct: 301 LNGWCRETIFNLKLPMKKRYQEVILCLENLAVMLAEQNLNFAIQAKHLYHDREEITVHIA 360
Query: 384 L 384
L
Sbjct: 361 L 361
>gi|53732461|ref|ZP_00349488.1| COG2933: Predicted SAM-dependent methyltransferase [Haemophilus
influenzae R2846]
Length = 363
Score = 563 bits (1451), Expect = e-159, Method: Composition-based stats.
Identities = 263/361 (72%), Positives = 304/361 (84%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+E+AAEITD+A+ GVFGFAR+ +NSGYVIFECYQP +AD LAR++P
Sbjct: 1 MNKLALYCRPGFEKEVAAEITDQASHLGVFGFARVQDNSGYVIFECYQPDEADRLARDIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIFARQM+V+SDLL DL DRI+PIV +++++ + SSEL+VETADTNEAKE
Sbjct: 61 FNRLIFARQMMVISDLLEDLDPADRISPIVAAFEELSQQVNFAQSSELFVETADTNEAKE 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQALKKQGWL+AK +QKCG LH FF++ N CYVGYSY NHS H MG
Sbjct: 121 LSTFCRKFTVPLRQALKKQGWLSAKASQKCGQFLHCFFVKPNCCYVGYSYVDNHSPHFMG 180
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEAILTFI R +E + LNE M VDLGACPGGWTYQLVKRGL
Sbjct: 181 IPRLKFPADAPSRSTLKLEEAILTFIPRKEENKRLNENMIGVDLGACPGGWTYQLVKRGL 240
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FVYAVDHGKMAA+LH+TGRIEHCAEDGFKFQP KR+K+DWLVCDMVEQPSRI+ L+ KWL
Sbjct: 241 FVYAVDHGKMAANLHDTGRIEHCAEDGFKFQPQKRKKVDWLVCDMVEQPSRISLLIGKWL 300
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
LN WC IFNLKLPMKKRY +V CL+ +A L+ Q L + +QAKHLYHDREEITV++
Sbjct: 301 LNAWCRETIFNLKLPMKKRYQEVILCLENLAVMLADQNLNFDIQAKHLYHDREEITVHIA 360
Query: 384 L 384
L
Sbjct: 361 L 361
>gi|148826196|ref|YP_001290949.1| SAM-dependent methyltransferase [Haemophilus influenzae PittEE]
gi|148716356|gb|ABQ98566.1| SAM-dependent methyltransferase [Haemophilus influenzae PittEE]
Length = 363
Score = 563 bits (1450), Expect = e-159, Method: Composition-based stats.
Identities = 263/361 (72%), Positives = 303/361 (83%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+E+AAEI D+A+ GVFGFAR+ +NSGYVIFECYQP +AD LAR++P
Sbjct: 1 MNKLALYCRPGFEKEVAAEIADQASHLGVFGFARVQDNSGYVIFECYQPDEADRLARDIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIFARQM+V+S LL DL DRI+PIV +++++ + SSEL+VETADTNEAKE
Sbjct: 61 FNRLIFARQMMVISGLLEDLDPADRISPIVTAFEELSQQVNFAQSSELFVETADTNEAKE 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQALKKQGWL+AK QK G LH FF++ N CYVGYSY NHS H MG
Sbjct: 121 LSTFCRKFTVPLRQALKKQGWLSAKATQKSGQFLHCFFVKPNCCYVGYSYVDNHSPHFMG 180
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEAILTFI R +E + LNE M VDLGACPGGWTYQLVKRGL
Sbjct: 181 IPRLKFPADAPSRSTLKLEEAILTFIPRKEENKRLNENMIGVDLGACPGGWTYQLVKRGL 240
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FVYAVDHGKMAASLH+TGRIEHCAEDGFKFQPPKR+K+DWLVCDMVEQPSRI+ L+ KWL
Sbjct: 241 FVYAVDHGKMAASLHDTGRIEHCAEDGFKFQPPKRKKVDWLVCDMVEQPSRISLLIGKWL 300
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
LNGWC IFNLKLPMKKRY +V CL+ +A L++Q L + +QAKHLYHDREEITV++
Sbjct: 301 LNGWCRETIFNLKLPMKKRYQEVILCLENLAVMLAEQNLNFEIQAKHLYHDREEITVHIA 360
Query: 384 L 384
L
Sbjct: 361 L 361
>gi|153094569|gb|EDN75386.1| possible methyltransferase [Mannheimia haemolytica PHL213]
Length = 362
Score = 540 bits (1391), Expect = e-152, Method: Composition-based stats.
Identities = 250/361 (69%), Positives = 297/361 (82%), Gaps = 4/361 (1%)
Query: 25 NKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPF 84
NKLALYCR GFE+E+A EITDKAA++G+FGFA + ENSGYVIFECYQ G+AD LA+ L F
Sbjct: 3 NKLALYCRAGFEKEVAGEITDKAAQQGIFGFANLKENSGYVIFECYQAGEADRLAQALKF 62
Query: 85 QQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKEL 144
+QLIF RQMLVV DLL +L + DRI+PI+ QY ++ + SS+++VET DTNEAKEL
Sbjct: 63 EQLIFVRQMLVVGDLLQNLSENDRISPILAQYAELNP----RQSSDVFVETPDTNEAKEL 118
Query: 145 LGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGI 204
L FCRKFTVPLR ALKKQGWL N + ++LH+ F R ACYVGY+YNHN S MGI
Sbjct: 119 LTFCRKFTVPLRSALKKQGWLGKSENMQGSVSLHILFTRPGACYVGYAYNHNKSPFFMGI 178
Query: 205 QRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLF 264
RLKFPAEAPSRSTLKLEEAILTFI + +E + N+TM VDLGACPGGWTYQLVKRG+F
Sbjct: 179 PRLKFPAEAPSRSTLKLEEAILTFIPQAEEKKRFNDTMVGVDLGACPGGWTYQLVKRGVF 238
Query: 265 VYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLL 324
VYAVDHGKMAASLHETGRIEHC EDGFKFQPPKR++IDWLVCDMVEQP RI++L+ KWL
Sbjct: 239 VYAVDHGKMAASLHETGRIEHCPEDGFKFQPPKRKQIDWLVCDMVEQPIRISKLIAKWLT 298
Query: 325 NGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRL 384
NGWC IFNLKLPMKKRY +VQ CL + ++L++ G +++QAKHLYHDREEITV++ +
Sbjct: 299 NGWCRETIFNLKLPMKKRYQEVQLCLNFLEEELTKHGFWFKMQAKHLYHDREEITVHIAV 358
Query: 385 L 385
+
Sbjct: 359 M 359
>gi|53729187|ref|ZP_00134032.2| COG2933: Predicted SAM-dependent methyltransferase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208165|ref|YP_001053390.1| putative RNA 2'-O-ribose methyltransferase MtfA [Actinobacillus
pleuropneumoniae L20]
gi|126096957|gb|ABN73785.1| putative RNA 2'-O-ribose methyltransferase MtfA [Actinobacillus
pleuropneumoniae L20]
Length = 363
Score = 537 bits (1383), Expect = e-151, Method: Composition-based stats.
Identities = 251/362 (69%), Positives = 292/362 (80%), Gaps = 4/362 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+E A EITDKAA+ GVFGF + ENSGY+IFECYQ GDAD LAREL
Sbjct: 1 MNKLALYCRAGFEKETAGEITDKAAQLGVFGFVNLKENSGYIIFECYQAGDADRLARELK 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F+QLIFARQM+VV D+L DLP +DRI+PIV QYQ + ++SS+++VET DTNEAKE
Sbjct: 61 FEQLIFARQMIVVGDMLQDLPAEDRISPIVAQYQALNP----RHSSDIFVETPDTNEAKE 116
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLR +LKKQGWL K + LH+ F+R CYVGY+YN N S MG
Sbjct: 117 LLTFCRKFTVPLRSSLKKQGWLTKSERAKGSMGLHILFVRPGCCYVGYAYNDNKSPFFMG 176
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPAEAPSRSTLKLEEAILTFI +E + + M VDLGACPGGWTYQLVKRG+
Sbjct: 177 IPRLKFPAEAPSRSTLKLEEAILTFIPEAEEKKRFTDEMTGVDLGACPGGWTYQLVKRGV 236
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FVYAVDHGKMAASLHETGRIEHC EDGFKFQP KR+ IDWLVCDMVEQP RI++L+ KWL
Sbjct: 237 FVYAVDHGKMAASLHETGRIEHCPEDGFKFQPLKRKTIDWLVCDMVEQPMRISKLIGKWL 296
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +VQ CL + ++L +QG +++QAKHLYHDREEITV++
Sbjct: 297 INGWCRETIFNLKLPMKKRYQEVQLCLAYLEEELEKQGFWFKIQAKHLYHDREEITVHIA 356
Query: 384 LL 385
++
Sbjct: 357 VM 358
>gi|84029353|sp|Q7VLM7|MTFA_HAEDU Putative RNA 2'-O-ribose methyltransferase mtfA
Length = 360
Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats.
Identities = 250/362 (69%), Positives = 297/362 (82%), Gaps = 5/362 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+ELA EITDKAA+ GVFGF + E SGYVIFECYQ +AD LARE+
Sbjct: 1 MNKLALYCRAGFEKELAGEITDKAAQLGVFGFVNLTEQSGYVIFECYQANEADHLAREIK 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F+QLIFARQM+VV +LL DLP DRI+PI+ QY+ T+ K+SS L+VET DTNEAK
Sbjct: 61 FEQLIFARQMIVVGELLEDLPTADRISPIIAQYK----TLQPKHSSALFVETPDTNEAKA 116
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLR +LK++GWL + N K ++LH+ F+R CYVGY+YNHN S MG
Sbjct: 117 LLTFCRKFTVPLRNSLKQEGWLTSSDNVKDSISLHILFIRPGCCYVGYAYNHNKSPFFMG 176
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP++APSRSTLKLEEAILTFI +QE + NE M VDLGACPGGWTYQLVKRGL
Sbjct: 177 IPRLKFPSDAPSRSTLKLEEAILTFIPINQEKKRFNEQMKGVDLGACPGGWTYQLVKRGL 236
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FVYAVDHGK+AA+LHETGRIEHC EDGFKFQPPK +++DWLVCDMVE+P RI++L+ KWL
Sbjct: 237 FVYAVDHGKIAATLHETGRIEHCVEDGFKFQPPKLKQMDWLVCDMVERPMRISQLIGKWL 296
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +VQ CL L +L++QGL ++LQAKHLYHDREEITV++
Sbjct: 297 MNGWCRETIFNLKLPMKKRYHEVQLCLSLFR-QLTKQGLCFKLQAKHLYHDREEITVHIV 355
Query: 384 LL 385
++
Sbjct: 356 IM 357
>gi|33152466|ref|NP_873819.1| hypothetical protein HD1396 [Haemophilus ducreyi 35000HP]
gi|33148689|gb|AAP96208.1| conserved hypothetical protein, truncated [Haemophilus ducreyi
35000HP]
Length = 331
Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats.
Identities = 231/329 (70%), Positives = 269/329 (81%), Gaps = 4/329 (1%)
Query: 22 KKMNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARE 81
K MNKLALYCR GFE+ELA EITDKAA+ GVFGF + E SGYVIFECYQ +AD LARE
Sbjct: 2 KIMNKLALYCRAGFEKELAGEITDKAAQLGVFGFVNLTEQSGYVIFECYQANEADHLARE 61
Query: 82 LPFQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEA 141
+ F+QLIFARQM+VV +LL DLP DRI+PI+ QY+ T+ K+SS L+VET DTNEA
Sbjct: 62 IKFEQLIFARQMIVVGELLEDLPTADRISPIIAQYK----TLQPKHSSALFVETPDTNEA 117
Query: 142 KELLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHL 201
K LL FCRKFTVPLR +LK++GWL + N K ++LH+ F+R CYVGY+YNHN S
Sbjct: 118 KALLTFCRKFTVPLRNSLKQEGWLTSSDNVKDSISLHILFIRPGCCYVGYAYNHNKSPFF 177
Query: 202 MGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKR 261
MGI RLKFP++APSRSTLKLEEAILTFI +QE + NE M VDLGACPGGWTYQLVKR
Sbjct: 178 MGIPRLKFPSDAPSRSTLKLEEAILTFIPINQEKKRFNEQMKGVDLGACPGGWTYQLVKR 237
Query: 262 GLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTK 321
GLFVYAVDHGK+AA+LHETGRIEHC EDGFKFQPPK +++DWLVCDMVE+P RI++L+ K
Sbjct: 238 GLFVYAVDHGKIAATLHETGRIEHCVEDGFKFQPPKLKQMDWLVCDMVERPMRISQLIGK 297
Query: 322 WLLNGWCHSMIFNLKLPMKKRYAQVQQCL 350
WL+NGWC IFNLKLPMKKRY +VQ CL
Sbjct: 298 WLMNGWCRETIFNLKLPMKKRYHEVQLCL 326
>gi|145639285|ref|ZP_01794891.1| predicted methyltransferase [Haemophilus influenzae PittII]
gi|145271588|gb|EDK11499.1| predicted methyltransferase [Haemophilus influenzae PittII]
Length = 287
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 207/285 (72%), Positives = 238/285 (83%)
Query: 100 LTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKELLGFCRKFTVPLRQAL 159
+ DL DRI+PIV +++++ + SSEL+VETADTNEAKEL FCRKFTVPLRQAL
Sbjct: 1 MEDLDPADRISPIVVAFEELSQQVNFAQSSELFVETADTNEAKELSTFCRKFTVPLRQAL 60
Query: 160 KKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGIQRLKFPAEAPSRSTL 219
KKQGWL+AK +QKCG LH FF++ N CYVGYSY NHS+H MGI RLKFPA+APSRSTL
Sbjct: 61 KKQGWLSAKASQKCGQFLHCFFVKPNCCYVGYSYVDNHSSHFMGIPRLKFPADAPSRSTL 120
Query: 220 KLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVDHGKMAASLHE 279
KLEEAILTFI R +E + LNE M VDLGACPGGWTYQLVKRGLFVYAVDHGKMAASLH+
Sbjct: 121 KLEEAILTFIPRKEENKRLNENMIGVDLGACPGGWTYQLVKRGLFVYAVDHGKMAASLHD 180
Query: 280 TGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWCHSMIFNLKLPM 339
TGRIEHCAEDGF FQPPKR+K+DWLVCDMVEQPSRI+ L+ KWLLNGWC IFNLKLPM
Sbjct: 181 TGRIEHCAEDGFTFQPPKRKKVDWLVCDMVEQPSRISLLIGKWLLNGWCRETIFNLKLPM 240
Query: 340 KKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRL 384
KKRY +V CL+ +A L++Q L + +QAKHLYHDREEITV++ L
Sbjct: 241 KKRYQEVILCLENLAVMLAEQNLNFDIQAKHLYHDREEITVHIAL 285
>gi|156932717|ref|YP_001436633.1| hypothetical protein ESA_00505 [Enterobacter sakazakii ATCC
BAA-894]
gi|156530971|gb|ABU75797.1| hypothetical protein ESA_00505 [Enterobacter sakazakii ATCC
BAA-894]
Length = 366
Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats.
Identities = 214/360 (59%), Positives = 264/360 (73%), Gaps = 7/360 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ LYCR GFE+E AAEITDKAA++GVFGFAR+ ENS YVIFECYQP DAD LARELP
Sbjct: 1 MNKVILYCRQGFEKECAAEITDKAAQQGVFGFARVKENSAYVIFECYQPDDADKLARELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQM V +LL DLP +DR+TP+V Q + ++ EL VE ADTNE+KE
Sbjct: 61 FSSLIFARQMFVAGELLQDLPPEDRVTPVVGMLQGV-----VEKGGELRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L+ FCRKFTVPLR AL+ L K + +H+FF+ CY GYSY +N+S MG
Sbjct: 116 LMKFCRKFTVPLRTALRDAKILANFETPKRPV-VHVFFIAPGCCYTGYSYTNNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEA FI + E L MYAVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPADAPSRSTLKLEEAFHVFIPADEWDERLANGMYAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+V +VD+G MA SL +TG++ EDGFK++ P R I W+VCDMVE+P+++A LM +WL
Sbjct: 235 WVASVDNGPMAQSLMDTGQVTWLREDGFKYR-PTRTNITWMVCDMVEKPAKVAALMAQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V Q + I +L + G+ ++QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSQNIASIQAQLDEHGINAQIQARQLYHDREEVTVHVR 353
>gi|157085556|gb|ABV15234.1| hypothetical protein CKO_04169 [Citrobacter koseri ATCC BAA-895]
Length = 366
Score = 440 bits (1132), Expect = e-122, Method: Composition-based stats.
Identities = 211/362 (58%), Positives = 264/362 (72%), Gaps = 7/362 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ L CR GFE+E AAEITDKAA + +FGFAR+ +N+GYV+FECYQP DA+ + +ELP
Sbjct: 1 MNKVVLLCRPGFEKECAAEITDKAARREIFGFARVKDNAGYVVFECYQPDDAEKIVKELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQM VV +LL DLP DRITPIV Q + ++ EL VE ADTNE+KE
Sbjct: 61 FSSLIFARQMFVVGELLRDLPPDDRITPIVGMLQGV-----VEKGGELRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L+ FCRKFTVPLR AL+ G L K + +H+FF+ CY GYSY N+S MG
Sbjct: 116 LMKFCRKFTVPLRAALRDAGILTNYETPKRPV-VHVFFIAPGCCYTGYSYPDNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEA+ FI + E L MYAVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPADAPSRSTLKLEEALHVFIPADEWDERLANGMYAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+VY+VD+G MA SL +TG++ EDGF+++ P R I W+VCDMVE+P+++A LM +WL
Sbjct: 235 WVYSVDNGPMAQSLMDTGQVTWLREDGFRYR-PNRNNISWMVCDMVEKPAKVAALMAQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V Q L I +L + G+ ++QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSQNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVR 353
Query: 384 LL 385
L
Sbjct: 354 RL 355
>gi|37524655|ref|NP_927999.1| hypothetical protein plu0654 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|81420306|sp|Q7N8R4|MTFA_PHOLL Putative RNA 2'-O-ribose methyltransferase mtfA
gi|36784080|emb|CAE12949.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 366
Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats.
Identities = 211/360 (58%), Positives = 271/360 (75%), Gaps = 7/360 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ALYCR GFE+E AAEITDKA +K ++GFAR+ +NSGYV+FECYQ DAD L RE+P
Sbjct: 1 MNKIALYCRPGFEKECAAEITDKAGQKEIYGFARVKDNSGYVLFECYQYEDADRLIREIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F++LIFARQMLVV +LL DLP +DRI+PIV + ++ + EL VE DTNE+KE
Sbjct: 61 FRELIFARQMLVVGELLRDLPPEDRISPIVGMLHGV-----IERAGELRVEVPDTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLR A++++ L + N + +H+FF+ CYVGYSY++N+S MG
Sbjct: 116 LLKFCRKFTVPLRNAMRQEKILLIRENVNRPV-IHVFFIAPGCCYVGYSYSNNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP++APSRSTLKLEEA FI + E L +YAVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPSDAPSRSTLKLEEAFHVFIPHDEWEERLASGLYAVDLGACPGGWTYQLVKRSM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V+AVD+G M+ SL +TG+++H DGFKF+P + I WLVCDMVE+P+++ +LM WL
Sbjct: 235 MVHAVDNGTMSKSLMDTGQVKHHKVDGFKFEPSA-KNIYWLVCDMVEKPAKVTQLMVDWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V LQ + +L + G+ ++QAKHLYHDREEITV++R
Sbjct: 294 VNGWCREAIFNLKLPMKKRYEEVAHNLQKMHLQLKEGGINAQIQAKHLYHDREEITVHVR 353
>gi|82545104|ref|YP_409051.1| hypothetical protein SBO_2689 [Shigella boydii Sb227]
gi|81246515|gb|ABB67223.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 366
Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats.
Identities = 213/360 (59%), Positives = 261/360 (72%), Gaps = 7/360 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ L CR GFE+E AAEITDKA ++ +FGFAR+ ENSGYVI+ECYQP D D L RELP
Sbjct: 1 MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENSGYVIYECYQPDDGDKLIRELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQ VV +LL LP +DRITPIV Q + ++ EL VE ADTNE+KE
Sbjct: 61 FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGV-----VEKGGELRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLR AL+ G L K + +H+FF+ CY GYSY++N+S MG
Sbjct: 116 LLKFCRKFTVPLRAALRDAGVLANYETPKRPV-VHVFFIAPGCCYTGYSYSNNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPAEAPSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPAEAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+VY+VD+G MA SL +TG++ EDGFKF+ P R I W+VCDMVE+P+++A LM +WL
Sbjct: 235 WVYSVDNGPMAQSLMDTGQVTWLREDGFKFR-PTRSNISWMVCDMVEKPAKVAALMAQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V L I +L + G+ ++QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVR 353
>gi|74313377|ref|YP_311796.1| hypothetical protein SSON_2963 [Shigella sonnei Ss046]
gi|84029357|sp|Q3YY51|MTFA_SHISS Putative RNA 2'-O-ribose methyltransferase mtfA
gi|73856854|gb|AAZ89561.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 366
Score = 437 bits (1124), Expect = e-121, Method: Composition-based stats.
Identities = 212/360 (58%), Positives = 261/360 (72%), Gaps = 7/360 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ L CR GFE+E AAEITDKA ++ +FGFAR+ EN+GYVI+ECYQP D D L RELP
Sbjct: 1 MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIYECYQPDDGDKLIRELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQ VV +LL LP +DRITPIV Q + ++ EL VE ADTNE+KE
Sbjct: 61 FSSLIFARQWFVVGELLQHLPPEDRITPIVDMLQGV-----VEKGGELRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLR AL+ G L K + +H+FF+ CY GYSY++N+S MG
Sbjct: 116 LLKFCRKFTVPLRAALRDAGVLANYETPKRPV-VHVFFIAPGCCYTGYSYSNNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPAEAPSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPAEAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+VY+VD+G MA SL +TG++ EDGFKF+ P R I W+VCDMVE+P+++A LM +WL
Sbjct: 235 WVYSVDNGPMAQSLMDTGQVTWLREDGFKFR-PTRSNISWMVCDMVEKPAKVAALMAQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V L I +L + G+ ++QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVR 353
>gi|24114090|ref|NP_708600.1| hypothetical protein SF2820 [Shigella flexneri 2a str. 301]
gi|30064151|ref|NP_838322.1| hypothetical protein S3015 [Shigella flexneri 2a str. 2457T]
gi|75176328|ref|ZP_00696472.1| COG2933: Predicted SAM-dependent methyltransferase [Shigella boydii
BS512]
gi|110806746|ref|YP_690266.1| hypothetical protein SFV_2885 [Shigella flexneri 5 str. 8401]
gi|81723085|sp|Q83JW6|MTFA_SHIFL Putative RNA 2'-O-ribose methyltransferase mtfA
gi|24053220|gb|AAN44307.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30042407|gb|AAP18132.1| hypothetical protein S3015 [Shigella flexneri 2a str. 2457T]
gi|110616294|gb|ABF04961.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 366
Score = 437 bits (1124), Expect = e-121, Method: Composition-based stats.
Identities = 212/360 (58%), Positives = 261/360 (72%), Gaps = 7/360 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ L CR GFE+E AAEITDKA ++ +FGFAR+ EN+GYVI+ECYQP D D L RELP
Sbjct: 1 MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIYECYQPDDGDKLIRELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQ VV +LL LP +DRITPIV Q + ++ EL VE ADTNE+KE
Sbjct: 61 FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGV-----VEKGGELRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLR AL+ G L K + +H+FF+ CY GYSY++N+S MG
Sbjct: 116 LLKFCRKFTVPLRAALRDAGVLANYETPKRPV-VHVFFIAPGCCYTGYSYSNNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPAEAPSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPAEAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+VY+VD+G MA SL +TG++ EDGFKF+ P R I W+VCDMVE+P+++A LM +WL
Sbjct: 235 WVYSVDNGPMAQSLMDTGQVTWLREDGFKFR-PTRSNISWMVCDMVEKPAKVAALMAQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V L I +L + G+ ++QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVR 353
>gi|15832920|ref|NP_311693.1| hypothetical protein ECs3666 [Escherichia coli O157:H7 str. Sakai]
gi|16130713|ref|NP_417286.1| predicted methyltransferase [Escherichia coli K12]
gi|75187534|ref|ZP_00700801.1| COG2933: Predicted SAM-dependent methyltransferase [Escherichia
coli E24377A]
gi|75196777|ref|ZP_00706847.1| COG2933: Predicted SAM-dependent methyltransferase [Escherichia
coli HS]
gi|75212574|ref|ZP_00712598.1| COG2933: Predicted SAM-dependent methyltransferase [Escherichia
coli B171]
gi|75228233|ref|ZP_00714890.1| COG2933: Predicted SAM-dependent methyltransferase [Escherichia
coli B7A]
gi|75256855|ref|ZP_00728449.1| COG2933: Predicted SAM-dependent methyltransferase [Escherichia
coli E22]
gi|75511949|ref|ZP_00734552.1| COG2933: Predicted SAM-dependent methyltransferase [Escherichia
coli 53638]
gi|83584934|ref|ZP_00923590.1| COG2933: Predicted SAM-dependent methyltransferase [Escherichia
coli 101-1]
gi|89109592|ref|AP_003372.1| predicted methyltransferase [Escherichia coli W3110]
gi|124528771|ref|ZP_01699995.1| conserved hypothetical protein [Escherichia coli B]
gi|83287983|sp|P0ADR7|MTFA_ECO57 Putative RNA 2'-O-ribose methyltransferase mtfA
gi|83287984|sp|P0ADR6|MTFA_ECOLI Putative RNA 2'-O-ribose methyltransferase mtfA
gi|312768|emb|CAA51815.1| unnamed protein product [Escherichia coli]
gi|882701|gb|AAB40456.1| alternate name Orf2 of X73413 and U01030; ORF_f366
gi|1789171|gb|AAC75848.1| predicted methyltransferase [Escherichia coli K12]
gi|13363138|dbj|BAB37089.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|85675625|dbj|BAE76878.1| predicted methyltransferase [Escherichia coli W3110]
gi|124500299|gb|EAY47774.1| conserved hypothetical protein [Escherichia coli B]
gi|157067940|gb|ABV07195.1| conserved hypothetical protein [Escherichia coli HS]
gi|157079091|gb|ABV18799.1| conserved hypothetical protein [Escherichia coli E24377A]
Length = 366
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 211/360 (58%), Positives = 261/360 (72%), Gaps = 7/360 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ L CR GFE+E AAEITDKA ++ +FGFAR+ EN+GYVI+ECYQP D D L RELP
Sbjct: 1 MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIYECYQPDDGDKLIRELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQ VV +LL LP +DRITPIV Q + ++ EL VE ADTNE+KE
Sbjct: 61 FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGV-----VEKGGELRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLR AL+ G L K + +H+FF+ CY GYSY++N+S MG
Sbjct: 116 LLKFCRKFTVPLRAALRDAGVLANYETPKRPV-VHVFFIAPGCCYTGYSYSNNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+VY+VD+G MA SL +TG++ EDGFKF+ P R I W+VCDMVE+P+++A LM +WL
Sbjct: 235 WVYSVDNGPMAQSLMDTGQVTWLREDGFKFR-PTRSNISWMVCDMVEKPAKVAALMAQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V L I +L + G+ ++QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVR 353
>gi|26249211|ref|NP_755251.1| Hypothetical protein ygdE [Escherichia coli CFT073]
gi|81474881|sp|Q8FEE5|MTFA_ECOL6 Putative RNA 2'-O-ribose methyltransferase mtfA
gi|26109618|gb|AAN81821.1|AE016765_223 Hypothetical protein ygdE [Escherichia coli CFT073]
Length = 366
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 211/360 (58%), Positives = 260/360 (72%), Gaps = 7/360 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ L CR GFE+E AAEITDKA ++ +FGFAR+ EN+GYVI+ECYQP D D L RELP
Sbjct: 1 MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIYECYQPDDGDKLIRELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQ VV +LL LP +DRITPIV Q + ++ EL VE ADTNE+KE
Sbjct: 61 FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGV-----VEKGGELRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLR AL+ G L K + +H+FF+ CY GYSY+ N+S MG
Sbjct: 116 LLKFCRKFTVPLRAALRDAGVLANYETPKRPV-VHVFFIAPGCCYTGYSYSSNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+VY+VD+G MA SL +TG++ EDGFKF+ P R I W+VCDMVE+P+++A LM +WL
Sbjct: 235 WVYSVDNGPMAQSLMDTGQVTWLREDGFKFR-PTRSNISWMVCDMVEKPAKVAALMAQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V L I +L + G+ ++QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVR 353
>gi|75369995|sp|Q6QNZ6|MTFA_PHOAZ Putative RNA 2'-O-ribose methyltransferase mtfA
gi|42541021|gb|AAS19408.1| SAM-dependent methyltransferase-like protein [Photorhabdus sp.
Az29]
Length = 366
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 210/360 (58%), Positives = 270/360 (75%), Gaps = 7/360 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ALYCR GFE+E AAEITDKA +K ++GFAR+ +NSGYV+FECYQ DAD L RE+P
Sbjct: 1 MNKIALYCRPGFEKECAAEITDKAGQKEIYGFARVKDNSGYVLFECYQHEDADRLIREIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F++LIFARQMLVV +LL DL +DRI+PI+ Q + ++ + EL VE DTNE+KE
Sbjct: 61 FRELIFARQMLVVGELLRDLSPEDRISPIIGMLQGV-----MERAGELRVEVPDTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLR A++++ L + N + +H+FF+ CYVGYSY++N+S MG
Sbjct: 116 LLKFCRKFTVPLRNAMRQEKILLIRENANRPV-IHVFFIAPGCCYVGYSYSNNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP++APSRSTLKLEEA FI + E L +YAVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPSDAPSRSTLKLEEAFHVFIPYDEWEERLASGLYAVDLGACPGGWTYQLVKRSM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V+AVD+G M+ SL +TG+++H DGFKF P + I WLVCDMVE+P+++ +LM WL
Sbjct: 235 MVHAVDNGPMSESLMDTGQVKHHKVDGFKFV-PSTKNIYWLVCDMVEKPAKVTQLMADWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V LQ + +L + G+ ++QAKHLYHDREEITV++R
Sbjct: 294 VNGWCREAIFNLKLPMKKRYEEVAHNLQKMHLQLKENGINAQIQAKHLYHDREEITVHVR 353
>gi|75241804|ref|ZP_00725623.1| COG2933: Predicted SAM-dependent methyltransferase [Escherichia
coli F11]
gi|110642947|ref|YP_670677.1| hypothetical protein YgdE [Escherichia coli 536]
gi|110344539|gb|ABG70776.1| hypothetical protein YgdE [Escherichia coli 536]
Length = 366
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 211/360 (58%), Positives = 260/360 (72%), Gaps = 7/360 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ L CR GFE+E AAEITDKA ++ +FGFAR+ EN+GYVI+ECYQP D D L RELP
Sbjct: 1 MNKVILLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIYECYQPDDGDKLIRELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQ VV +LL LP +DRITPIV Q + ++ EL VE ADTNE+KE
Sbjct: 61 FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGV-----VEKGGELRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLR AL+ G L K + +H+FF+ CY GYSY+ N+S MG
Sbjct: 116 LLKFCRKFTVPLRAALRDAGVLANYETPKRPV-VHVFFIAPGCCYTGYSYSSNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+VY+VD+G MA SL +TG++ EDGFKF+ P R I W+VCDMVE+P+++A LM +WL
Sbjct: 235 WVYSVDNGPMAQSLMDTGQVTWLREDGFKFR-PTRSNISWMVCDMVEKPAKVAALMAQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V L I +L + G+ ++QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVR 353
>gi|82778185|ref|YP_404534.1| hypothetical protein SDY_3024 [Shigella dysenteriae Sd197]
gi|81242333|gb|ABB63043.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 366
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 210/360 (58%), Positives = 260/360 (72%), Gaps = 7/360 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ L CR GFE+E AAEITDKA ++ +FGFAR+ EN+GYVI+ECYQP D D L RELP
Sbjct: 1 MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIYECYQPDDGDKLIRELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQ VV +LL LP +DRITPIV Q + ++ EL VE ADTNE+KE
Sbjct: 61 FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGV-----VEKGGELRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLR L+ G L K + +H+FF+ CY GYSY++N+S MG
Sbjct: 116 LLKFCRKFTVPLRAVLRDAGGLANYETPKRPV-VHVFFIAPGCCYTGYSYSNNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+VY+VD+G MA SL +TG++ EDGFKF+ P R I W+VCDMVE+P+++A LM +WL
Sbjct: 235 WVYSVDNGPMAQSLMDTGQVTWLREDGFKFR-PTRSNISWMVCDMVEKPAKVAALMAQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V L I +L + G+ ++QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVR 353
>gi|50119957|ref|YP_049124.1| hypothetical protein ECA1017 [Erwinia carotovora subsp. atroseptica
SCRI1043]
gi|81645953|sp|Q6D8F7|MTFA_ERWCT Putative RNA 2'-O-ribose methyltransferase mtfA
gi|49610483|emb|CAG73928.1| conserved hypothetical protein [Erwinia carotovora subsp.
atroseptica SCRI1043]
Length = 366
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 209/362 (57%), Positives = 263/362 (72%), Gaps = 11/362 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ LYCR GFE+E AAEIT+KA + FGFAR+ ENSGYV+FECYQ DA+ L + LP
Sbjct: 1 MNKVILYCRPGFEKECAAEITEKATQHNAFGFARVKENSGYVVFECYQHEDAERLVKTLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIF RQM V DLL DLP +DRITPIV T A++ + +L VE DTNE+KE
Sbjct: 61 FHELIFVRQMFVSGDLLRDLPPEDRITPIVGML-----TGAIERAGDLRVEVPDTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWL--NAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHL 201
L+ FCRKFTVPLR AL++ L + K ++ LH+ F+ CYVGYSY++N+S
Sbjct: 116 LMKFCRKFTVPLRAALREHKILLGHEKADRP---VLHVLFIAPGCCYVGYSYSNNNSPFY 172
Query: 202 MGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKR 261
MGI RLKFP++APSRSTLKLEEA F+ + E L MYAVDLGACPGGWTYQLVKR
Sbjct: 173 MGIPRLKFPSDAPSRSTLKLEEAFHVFVPADEWDERLGSGMYAVDLGACPGGWTYQLVKR 232
Query: 262 GLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTK 321
+ VYAVD+G MA SL +TG++ H DGF+F+PP R + WLVCDMVE+P+++ LM+
Sbjct: 233 SMMVYAVDNGPMAPSLMDTGQVMHHQADGFRFEPP-RNNVYWLVCDMVEKPAKVTSLMSD 291
Query: 322 WLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVY 381
WL+ GWC IFNLKLPMKKRY +V Q L L+ ++LS+ G+ + AKHLYHDREE+TV+
Sbjct: 292 WLIKGWCRETIFNLKLPMKKRYEEVSQNLALLRERLSENGIHAEVHAKHLYHDREEVTVH 351
Query: 382 LR 383
+R
Sbjct: 352 VR 353
>gi|118070141|ref|ZP_01538376.1| conserved hypothetical protein [Serratia proteamaculans 568]
gi|118015612|gb|EAV29549.1| conserved hypothetical protein [Serratia proteamaculans 568]
Length = 367
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 210/360 (58%), Positives = 264/360 (73%), Gaps = 7/360 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN+LALYCR GFE+E AAEIT KAAE VFGFAR+ +NSGYV+FECYQP DAD LA+E+P
Sbjct: 1 MNRLALYCRQGFEKECAAEITAKAAELEVFGFARVKDNSGYVLFECYQPDDADRLAKEIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F++LIFARQ+LVV +LL DLP +DR++PIV + D EL VE DTNE+KE
Sbjct: 61 FRELIFARQILVVGELLRDLPPEDRVSPIVGMLIGVVD-----RGGELRVEVPDTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRK TVPLR A+++Q L A+ N K +H+FF+ CYVGYS+++N+S MG
Sbjct: 116 LLKFCRKLTVPLRTAMREQKVLMAREN-KTRPVVHVFFIAPGCCYVGYSFSNNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP++APSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLV+R +
Sbjct: 175 IPRLKFPSDAPSRSTLKLEEAFHVFIPADEWDERLASGMHAVDLGACPGGWTYQLVQRSM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V+AVD+G MA SL +TG++ H DGF+++ P KI WLVCDMVE+P+++ LM +WL
Sbjct: 235 MVHAVDNGPMAPSLMDTGQVTHHRADGFRYE-PSSSKIYWLVCDMVEKPAKVTSLMIQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+ GWC IFNLKLPMKKRY +V Q L I + L G+ + AK LYHDREE+TV++R
Sbjct: 294 VKGWCREAIFNLKLPMKKRYEEVSQNLLAIKEALDTAGISSEIHAKQLYHDREEVTVHVR 353
>gi|15803328|ref|NP_289361.1| hypothetical protein Z4123 [Escherichia coli O157:H7 EDL933]
gi|25366978|pir||D85932 hypothetical protein ygdE [imported] - Escherichia coli (strain
O157:H7, substrain EDL933)
gi|12517285|gb|AAG57920.1|AE005508_11 orf, hypothetical protein [Escherichia coli O157:H7 EDL933]
Length = 366
Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats.
Identities = 210/360 (58%), Positives = 260/360 (72%), Gaps = 7/360 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ L CR GFE+E AAEITDK ++ +FGFAR+ EN+GYVI+ECYQP D D L RELP
Sbjct: 1 MNKVVLLCRPGFEKECAAEITDKXGQREIFGFARVKENAGYVIYECYQPDDGDKLIRELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQ VV +LL LP +DRITPIV Q + ++ EL VE ADTNE+KE
Sbjct: 61 FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGV-----VEKGGELRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLR AL+ G L K + +H+FF+ CY GYSY++N+S MG
Sbjct: 116 LLKFCRKFTVPLRAALRDAGVLANYETPKRPV-VHVFFIAPGCCYTGYSYSNNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+VY+VD+G MA SL +TG++ EDGFKF+ P R I W+VCDMVE+P+++A LM +WL
Sbjct: 235 WVYSVDNGPMAQSLMDTGQVTWLREDGFKFR-PTRSNISWMVCDMVEKPAKVAALMAQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V L I +L + G+ ++QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVR 353
>gi|146312893|ref|YP_001177967.1| hypothetical protein Ent638_3252 [Enterobacter sp. 638]
gi|145319769|gb|ABP61916.1| conserved hypothetical protein [Enterobacter sp. 638]
Length = 366
Score = 434 bits (1115), Expect = e-120, Method: Composition-based stats.
Identities = 208/360 (57%), Positives = 261/360 (72%), Gaps = 7/360 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ LYCR GFE+E AAEITDKAA + VFGFAR+ EN+GYV+FECYQP DAD L RELP
Sbjct: 1 MNKVVLYCRPGFEKECAAEITDKAARREVFGFARVKENAGYVVFECYQPDDADKLVRELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQM V +LL DLP +DRI+PI Q + ++ +L VE ADTNE+KE
Sbjct: 61 FSSLIFARQMFVAGELLRDLPPEDRISPISGMLQGV-----VEKGGDLRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L+ FCRK TVPLR AL++ G L K + +H+FF+ CY GYSY N+S MG
Sbjct: 116 LMKFCRKLTVPLRAALREVGVLTNYETPKRPV-VHVFFIAPGCCYTGYSYTTNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RL+FP++APSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLRFPSDAPSRSTLKLEEAFHVFIPADEWDERLANGMHAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+V +VD+G MA SL +TG++ EDGF+++ P R I W+VCDMVE+P+++A LM WL
Sbjct: 235 WVASVDNGPMAQSLMDTGQVTWLREDGFRYR-PTRNNITWMVCDMVEKPAKVAALMATWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V Q L I ++L+ QG+ +QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSQNLAYIQEQLNAQGINAEIQARQLYHDREEVTVHVR 353
>gi|75233968|ref|ZP_00718417.1| COG2933: Predicted SAM-dependent methyltransferase [Escherichia
coli E110019]
Length = 366
Score = 434 bits (1115), Expect = e-120, Method: Composition-based stats.
Identities = 210/360 (58%), Positives = 260/360 (72%), Gaps = 7/360 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ L CR GFE+E AAEITDKA ++ +FGFAR+ EN+GYVI+ECYQP D D L RELP
Sbjct: 1 MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIYECYQPDDGDKLIRELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQ VV +LL LP +DRITPIV Q + ++ EL VE ADTNE+KE
Sbjct: 61 FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGV-----VEKGGELRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLR L+ G L K + +H+FF+ CY GYSY++N+S MG
Sbjct: 116 LLKFCRKFTVPLRADLRDAGVLANYETPKRPV-VHVFFIAPGCCYTGYSYSNNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+VY+VD+G MA SL +TG++ EDGFKF+ P R I W+VCDMVE+P+++A LM +WL
Sbjct: 235 WVYSVDNGPMAQSLMDTGQVTWLREDGFKFR-PTRSNISWMVCDMVEKPAKVAALMAQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V L I +L + G+ ++QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVR 353
>gi|77632951|ref|ZP_00795116.1| COG2933: Predicted SAM-dependent methyltransferase [Yersinia pestis
Angola]
Length = 368
Score = 434 bits (1115), Expect = e-120, Method: Composition-based stats.
Identities = 208/359 (57%), Positives = 270/359 (75%), Gaps = 7/359 (1%)
Query: 25 NKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPF 84
NK+ALYCR GFE+E AAEIT+KAA+ +FGFAR+ ENSGYV+FECYQ DAD L RE+PF
Sbjct: 3 NKIALYCRSGFEKECAAEITEKAAQLEIFGFARVKENSGYVLFECYQLEDADRLIREIPF 62
Query: 85 QQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKEL 144
++ IFARQM+VV +LL DLP +DR++PIV + ++ + EL VE ADTNE+KEL
Sbjct: 63 REFIFARQMMVVGELLKDLPPEDRVSPIVGMLVGV-----IEKAGELRVEVADTNESKEL 117
Query: 145 LGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGI 204
L FCRK TVPLR AL++Q L+A+ N + +H+FF+ CYVGYSY++N+S MGI
Sbjct: 118 LKFCRKLTVPLRSALREQKILSARENAHRPV-VHVFFIAPGCCYVGYSYSNNNSPFYMGI 176
Query: 205 QRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLF 264
RLKFP++APSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLV+R +
Sbjct: 177 PRLKFPSDAPSRSTLKLEEAFHVFIPADEWEERLASGMHAVDLGACPGGWTYQLVQRSMM 236
Query: 265 VYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLL 324
+ AVD+G MA SL +TG++ H DGFK++ P R I WLVCDMVE+P+++ +L+TKWL+
Sbjct: 237 IQAVDNGLMAQSLMDTGQVTHNRADGFKYE-PTRSNIYWLVCDMVEKPTKVTQLITKWLV 295
Query: 325 NGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
NGWC IFNLKLPMKKRY +V Q L ++ ++L + G+ + AK LYHDREE+TV++R
Sbjct: 296 NGWCREAIFNLKLPMKKRYEEVVQNLAMMDEQLKENGINADIHAKQLYHDREEVTVHVR 354
>gi|16121331|ref|NP_404644.1| hypothetical protein YPO1031 [Yersinia pestis CO92]
gi|22127028|ref|NP_670451.1| hypothetical protein y3152 [Yersinia pestis KIM]
gi|45442588|ref|NP_994127.1| Predicted SAM-dependent methyltransferase [Yersinia pestis biovar
Microtus str. 91001]
gi|51597330|ref|YP_071521.1| hypothetical protein YPTB3015 [Yersinia pseudotuberculosis IP
32953]
gi|89105122|ref|ZP_01177647.1| COG2933: Predicted SAM-dependent methyltransferase [Yersinia pestis
biovar Orientalis str. IP275]
gi|108806499|ref|YP_650415.1| hypothetical protein YPA_0502 [Yersinia pestis Antiqua]
gi|108813131|ref|YP_648898.1| hypothetical protein YPN_2971 [Yersinia pestis Nepal516]
gi|145598964|ref|YP_001163040.1| hypothetical protein YPDSF_1682 [Yersinia pestis Pestoides F]
gi|149366968|ref|ZP_01889001.1| putative RNA 2'-O-ribose methyltransferase [Yersinia pestis
CA88-4125]
gi|153949986|ref|YP_001399985.1| hypothetical protein YpsIP31758_1001 [Yersinia pseudotuberculosis
IP 31758]
gi|81594470|sp|Q8ZH78|MTFA_YERPE Putative RNA 2'-O-ribose methyltransferase mtfA
gi|81638757|sp|Q667H7|MTFA_YERPS Putative RNA 2'-O-ribose methyltransferase mtfA
gi|21960076|gb|AAM86702.1|AE013915_11 hypothetical protein y3152 [Yersinia pestis KIM]
gi|45437453|gb|AAS63004.1| Predicted SAM-dependent methyltransferase [Yersinia pestis biovar
Microtus str. 91001]
gi|51590612|emb|CAH22253.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|108776779|gb|ABG19298.1| hypothetical protein YPN_2971 [Yersinia pestis Nepal516]
gi|108778412|gb|ABG12470.1| hypothetical protein YPA_0502 [Yersinia pestis Antiqua]
gi|115346810|emb|CAL19696.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145210660|gb|ABP40067.1| hypothetical protein YPDSF_1682 [Yersinia pestis Pestoides F]
gi|149290582|gb|EDM40658.1| putative RNA 2'-O-ribose methyltransferase [Yersinia pestis
CA88-4125]
gi|152961481|gb|ABS48942.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
31758]
Length = 368
Score = 433 bits (1114), Expect = e-120, Method: Composition-based stats.
Identities = 208/359 (57%), Positives = 270/359 (75%), Gaps = 7/359 (1%)
Query: 25 NKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPF 84
NK+ALYCR GFE+E AAEIT+KAA+ +FGFAR+ ENSGYV+FECYQ DAD L RE+PF
Sbjct: 3 NKIALYCRSGFEKECAAEITEKAAQLEIFGFARVKENSGYVLFECYQLEDADRLIREIPF 62
Query: 85 QQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKEL 144
++ IFARQM+VV +LL DLP +DR++PIV + ++ + EL VE ADTNE+KEL
Sbjct: 63 REFIFARQMMVVGELLKDLPPEDRVSPIVGMLVGV-----IEKAGELRVEVADTNESKEL 117
Query: 145 LGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGI 204
L FCRK TVPLR AL++Q L+A+ N + +H+FF+ CYVGYSY++N+S MGI
Sbjct: 118 LKFCRKLTVPLRSALREQKILSARENAHRPV-VHVFFIAPGCCYVGYSYSNNNSPFYMGI 176
Query: 205 QRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLF 264
RLKFP++APSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLV+R +
Sbjct: 177 PRLKFPSDAPSRSTLKLEEAFHVFIPADEWEERLASGMHAVDLGACPGGWTYQLVQRSMM 236
Query: 265 VYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLL 324
+ AVD+G MA SL +TG++ H DGFK++ P R I WLVCDMVE+P+++ +L+TKWL+
Sbjct: 237 IQAVDNGLMAQSLMDTGQVTHHRADGFKYE-PTRSNIYWLVCDMVEKPTKVTQLITKWLV 295
Query: 325 NGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
NGWC IFNLKLPMKKRY +V Q L ++ ++L + G+ + AK LYHDREE+TV++R
Sbjct: 296 NGWCREAIFNLKLPMKKRYEEVVQNLAMMDEQLKENGINADIHAKQLYHDREEVTVHVR 354
>gi|123443499|ref|YP_001007472.1| hypothetical protein YE3298 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090460|emb|CAL13328.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 368
Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats.
Identities = 208/359 (57%), Positives = 271/359 (75%), Gaps = 7/359 (1%)
Query: 25 NKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPF 84
NK+ALYCR GFE+E AAEIT KAA+ +FGFAR+ ENSGYV+FECYQ DAD L RE+PF
Sbjct: 3 NKIALYCRSGFEKECAAEITTKAAQLEIFGFARVKENSGYVLFECYQLEDADRLIREVPF 62
Query: 85 QQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKEL 144
++LIFARQM+VV +LL DLP +DR++PIV T ++ + EL VE ADTNE+KEL
Sbjct: 63 RELIFARQMMVVGELLKDLPPEDRVSPIVGML-----TGVVEKAGELRVEVADTNESKEL 117
Query: 145 LGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGI 204
L FCRK TVPLR A+++Q L+A+ N + +H+FF+ + CYVGYSY++N+S MGI
Sbjct: 118 LKFCRKLTVPLRNAMREQKILSARENPHRPV-VHVFFIASGCCYVGYSYSNNNSPFYMGI 176
Query: 205 QRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLF 264
RLKFP++APSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLV+R +
Sbjct: 177 PRLKFPSDAPSRSTLKLEEAFHVFIPADEWEERLASGMHAVDLGACPGGWTYQLVQRSMM 236
Query: 265 VYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLL 324
V A+D+G MA SL +TG++ H DGFK++ P R I WLVCDMVE+P+++ +L+ KWL+
Sbjct: 237 VQAIDNGLMAQSLMDTGQVTHHRVDGFKYE-PTRSNIYWLVCDMVEKPAKVTQLIIKWLV 295
Query: 325 NGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
NGWC IFNLKLPMKKR+ V + L++I ++L + G+ +QAK LYHDREE+TV++R
Sbjct: 296 NGWCREAIFNLKLPMKKRFEVVSENLEMIDEQLKENGINAHIQAKQLYHDREEVTVHVR 354
>gi|77972697|ref|ZP_00828256.1| COG2933: Predicted SAM-dependent methyltransferase [Yersinia
frederiksenii ATCC 33641]
Length = 368
Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 207/359 (57%), Positives = 271/359 (75%), Gaps = 7/359 (1%)
Query: 25 NKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPF 84
NK+ALYCR GFE+E AAEIT KAA+ +FGFAR+ ENSGYV+FECYQ DAD L RE+PF
Sbjct: 3 NKIALYCRSGFEKECAAEITAKAAQLEIFGFARVKENSGYVLFECYQLEDADRLIREVPF 62
Query: 85 QQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKEL 144
++LIFARQM+VV +LL DLP +DR++PIV + ++ + EL VE ADTNE+KEL
Sbjct: 63 RELIFARQMMVVGELLKDLPPEDRVSPIVGMLVGV-----IEKAGELRVEVADTNESKEL 117
Query: 145 LGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGI 204
L FCRK TVPLR A+++Q L+ + N + +H+FF+ + CYVGYSY++N+S MGI
Sbjct: 118 LKFCRKLTVPLRSAMREQKILSVRENAHRPV-VHVFFIASGCCYVGYSYSNNNSPFYMGI 176
Query: 205 QRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLF 264
RLKFP++APSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLV+R +
Sbjct: 177 PRLKFPSDAPSRSTLKLEEAFHVFIPADEWEERLASGMHAVDLGACPGGWTYQLVQRSMM 236
Query: 265 VYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLL 324
V A+D+G MA SL +TG++ H DGFK++ P R I WLVCDMVE+P+++ +L+ KWL+
Sbjct: 237 VQAIDNGLMAQSLMDTGQVTHHRVDGFKYE-PTRSNIYWLVCDMVEKPAKVTQLIIKWLV 295
Query: 325 NGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
NGWC IFNLKLPMKKR+ V + L++I ++L +QG+ +QAK LYHDREE+TV++R
Sbjct: 296 NGWCREAIFNLKLPMKKRFEVVSENLEMIDEQLKEQGINAHIQAKQLYHDREEVTVHVR 354
>gi|91212175|ref|YP_542161.1| hypothetical protein YgdE [Escherichia coli UTI89]
gi|117625034|ref|YP_854022.1| methyltransferase [Escherichia coli APEC O1]
gi|91073749|gb|ABE08630.1| hypothetical protein YgdE [Escherichia coli UTI89]
gi|115514158|gb|ABJ02233.1| methyltransferase [Escherichia coli APEC O1]
Length = 366
Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 210/360 (58%), Positives = 259/360 (71%), Gaps = 7/360 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ L CR GFE+E AAEITDKA ++ +FGFAR+ EN+GYVI+ECYQP D D L RELP
Sbjct: 1 MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIYECYQPDDGDKLIRELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQ VV +LL LP +DRITPIV Q + ++ EL VE ADTNE+KE
Sbjct: 61 FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGV-----VEKGGELRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLR AL+ G L K + +H+FF+ CY GYSY+ N+S MG
Sbjct: 116 LLKFCRKFTVPLRAALRDAGVLANYETPKRPV-VHVFFIAPGCCYTGYSYSSNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+VY+VD+G MA SL +TG++ EDGFKF+ P I W+VCDMVE+P+++A LM +WL
Sbjct: 235 WVYSVDNGPMAQSLMDTGQVTWLREDGFKFR-PTCSNISWMVCDMVEKPAKVAALMAQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V L I +L + G+ ++QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVR 353
>gi|152971679|ref|YP_001336788.1| putative RNA 2'-O-ribose methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|150956528|gb|ABR78558.1| putative RNA 2'-O-ribose methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
Length = 366
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 211/362 (58%), Positives = 263/362 (72%), Gaps = 7/362 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ LYCR GFE+E AAEITDKAA VFGFAR+ E+SGYVIFE YQ D + L R+LP
Sbjct: 1 MNKVVLYCRPGFEKECAAEITDKAARLEVFGFARVKEDSGYVIFEGYQQDDGEKLVRDLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQM VV +LL DLP +DRITPIV Q + ++ EL VE ADTNE+KE
Sbjct: 61 FSSLIFARQMFVVGELLRDLPPEDRITPIVGMLQGM-----VEKGGELRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L+ FCRKFTVPLR AL++ G L K + +H+FF+ CY GYSY++N+S MG
Sbjct: 116 LMKFCRKFTVPLRAALREAGVLTNYETPKRPV-VHVFFIAPGCCYTGYSYSNNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP++APSRSTLKLEEA FI + E L MYAVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPSDAPSRSTLKLEEAFHVFIPADEWDERLANGMYAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+V +VD+G MA SL +TG++ EDGF+++ P R I W+VCDMVE+P+++A LM +WL
Sbjct: 235 WVSSVDNGPMAQSLMDTGQVTWLREDGFRYR-PNRNNISWMVCDMVEKPAKVAALMAQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V Q L I +L + G+ ++QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSQNLAYIQAQLDEHGVNAQIQARQLYHDREEVTVHVR 353
Query: 384 LL 385
L
Sbjct: 354 RL 355
>gi|77963188|ref|ZP_00827000.1| COG2933: Predicted SAM-dependent methyltransferase [Yersinia
mollaretii ATCC 43969]
Length = 368
Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats.
Identities = 206/359 (57%), Positives = 270/359 (75%), Gaps = 7/359 (1%)
Query: 25 NKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPF 84
NK+ALYCR GFE+E AAEIT KAA+ +FGFAR+ +NSGYV+FECYQ DAD L RE+PF
Sbjct: 3 NKIALYCRSGFEKECAAEITAKAAQLEIFGFARVKDNSGYVLFECYQLEDADRLIREVPF 62
Query: 85 QQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKEL 144
++LIFARQM+VV +LL DLP +DR++PIV T ++ + EL VE DTNE+KEL
Sbjct: 63 RELIFARQMMVVGELLKDLPPEDRVSPIVGML-----TGVIEKAGELRVEVPDTNESKEL 117
Query: 145 LGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGI 204
L FCRK TVPLR A+++Q L+A+ N + +H+FF+ CYVGYSY++N+S MGI
Sbjct: 118 LKFCRKLTVPLRSAMREQKILSARENAHRPV-VHVFFIAPGCCYVGYSYSNNNSPFYMGI 176
Query: 205 QRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLF 264
RLKFP++APSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLV+R +
Sbjct: 177 PRLKFPSDAPSRSTLKLEEAFHMFIPADEWEERLASGMHAVDLGACPGGWTYQLVQRSMM 236
Query: 265 VYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLL 324
+ A+D+G MA SL +TG++ H DGFK++ P R I WLVCDMVE+P+++ EL+TKWL+
Sbjct: 237 IQAIDNGSMAQSLMDTGQVTHHRVDGFKYE-PTRSNIYWLVCDMVEKPAKVTELITKWLV 295
Query: 325 NGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
NGWC IFNLKLPMKKR+ V + L+++ ++L + G+ +QAK LYHDREE+TV++R
Sbjct: 296 NGWCREAIFNLKLPMKKRFEIVSENLEMMDEQLRENGINAHIQAKQLYHDREEVTVHVR 354
>gi|77956218|ref|ZP_00820340.1| COG2933: Predicted SAM-dependent methyltransferase [Yersinia
bercovieri ATCC 43970]
Length = 368
Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats.
Identities = 206/359 (57%), Positives = 270/359 (75%), Gaps = 7/359 (1%)
Query: 25 NKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPF 84
NK+ALYCR GFE+E AAEIT KAA+ +FGFAR+ +NSGYV+FECYQ DAD L RE+PF
Sbjct: 3 NKIALYCRSGFEKECAAEITAKAAQLEIFGFARVKDNSGYVLFECYQLEDADRLIREVPF 62
Query: 85 QQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKEL 144
++LIFARQM+VV +LL DLP +DR++PIV T ++ + EL VE DTNE+KEL
Sbjct: 63 RELIFARQMMVVGELLKDLPPEDRVSPIVGML-----TGVIEKAGELRVEVPDTNESKEL 117
Query: 145 LGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGI 204
L FCRK TVPLR A+++Q L+A+ N + +H+FF+ + CYVGYSY++N+S MGI
Sbjct: 118 LKFCRKLTVPLRSAMREQKILSARENAHRPV-VHVFFIASGCCYVGYSYSNNNSPFYMGI 176
Query: 205 QRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLF 264
RLKFP++APSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLV+R +
Sbjct: 177 PRLKFPSDAPSRSTLKLEEAFHMFIPADEWEERLASGMHAVDLGACPGGWTYQLVQRSMM 236
Query: 265 VYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLL 324
V A+D+G MA SL +TG++ H DGFK++ P R I WLVCDMVE+P+++ EL+ KWL+
Sbjct: 237 VQAIDNGAMAQSLMDTGQVTHHRVDGFKYE-PTRSNIYWLVCDMVEKPAKVTELIIKWLV 295
Query: 325 NGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
NGWC IFNLKLPMKKR+ V + L+++ ++L + G+ +QAK LYHDREE+TV++R
Sbjct: 296 NGWCREAIFNLKLPMKKRFEIVSENLEMMDEQLRENGINAHIQAKQLYHDREEVTVHVR 354
>gi|37679065|ref|NP_933674.1| predicted SAM-dependent methyltransferase [Vibrio vulnificus YJ016]
gi|37197807|dbj|BAC93645.1| predicted SAM-dependent methyltransferase [Vibrio vulnificus YJ016]
Length = 395
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 211/371 (56%), Positives = 269/371 (72%), Gaps = 5/371 (1%)
Query: 15 SIKKKINKKMNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGD 74
S K + + +L LYCR GFE+E A EI DKA + V+GF R+ +N+GYV+FECYQ GD
Sbjct: 24 SFKNERGISVKQLMLYCRQGFEKECAGEIQDKATQLEVYGFPRVFKNAGYVLFECYQDGD 83
Query: 75 ADLLARELPFQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVE 134
AD LAREL F LIFARQM V+ T+LP +DRI+PI+ + +I A +L +E
Sbjct: 84 ADKLARELDFNALIFARQMFAVAAEFTELPSEDRISPILAELGEID---AFPVCGDLRIE 140
Query: 135 TADTNEAKELLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYN 194
T DTNEAKELL FCRKFTVP+RQAL+ +G L AK N K + HL F+ + C+ GYSY+
Sbjct: 141 TPDTNEAKELLKFCRKFTVPMRQALRGKGLLLAKENAKKPV-FHLCFVASGHCFAGYSYS 199
Query: 195 HNHSAHLMGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGW 254
HN+S MGI RLKFPA+APSRSTLKLEEA FI R + L+ M+AVDLGACPGGW
Sbjct: 200 HNNSRFFMGIPRLKFPADAPSRSTLKLEEAFHVFIPREEWDTRLSSGMWAVDLGACPGGW 259
Query: 255 TYQLVKRGLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSR 314
TYQLV+R +FV+ VD+G MA SL ETG+I+H DGFKF+ P R+ + WLVCDMVE+P+R
Sbjct: 260 TYQLVQRSMFVHCVDNGMMADSLMETGQIKHHMVDGFKFE-PDRKNVTWLVCDMVEKPAR 318
Query: 315 IAELMTKWLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHD 374
+A LM +WL+ GW IFNLKLPMK RY +V Q ++ + L + +K++LQAKHLYHD
Sbjct: 319 VAHLMGEWLIKGWAKETIFNLKLPMKGRYDEVLQDIENLKTFLIENKVKFKLQAKHLYHD 378
Query: 375 REEITVYLRLL 385
REEITV++++L
Sbjct: 379 REEITVHIQVL 389
>gi|16761758|ref|NP_457375.1| hypothetical protein STY3120 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16766284|ref|NP_461899.1| putative SAM-dependent methyltransferase [Salmonella typhimurium
LT2]
gi|29143242|ref|NP_806584.1| hypothetical protein t2888 [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
gi|81416253|sp|Q7CPW1|MTFA_SALTY Putative RNA 2'-O-ribose methyltransferase mtfA
gi|81499500|sp|Q8XFI3|MTFA_SALTI Putative RNA 2'-O-ribose methyltransferase mtfA
gi|25366982|pir||AF0863 conserved hypothetical protein STY3120 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16421530|gb|AAL21858.1| putative SAM-dependent methyltransferase [Salmonella typhimurium
LT2]
gi|16504060|emb|CAD02806.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138875|gb|AAO70444.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
Length = 366
Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats.
Identities = 205/362 (56%), Positives = 260/362 (71%), Gaps = 7/362 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ L CR GFE+E AAEITDKA ++ +FGFAR+ EN+GYVI+ECYQP D + L ELP
Sbjct: 1 MNKVVLLCRPGFEKECAAEITDKAGKREIFGFARVKENAGYVIYECYQPEDGEKLISELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQ VV +LL LP +DRITPIV Q + ++ EL VE ADTNE+KE
Sbjct: 61 FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGV-----VEKGGELRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L+ FCRKFTVPLR AL+ G L K + +H+FF+ CY GYS+ HN+S MG
Sbjct: 116 LMKFCRKFTVPLRAALRDAGVLTNYETPKRPV-VHVFFIAPGCCYTGYSFAHNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP++APSRSTLKLEEA+ FI + E L MYAVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPSDAPSRSTLKLEEALHVFIPEDEWDERLANGMYAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+VY+VD+G MA SL +TG++ EDGF+++ P R I W+VCDMVE+P+++ LM +WL
Sbjct: 235 WVYSVDNGPMAQSLMDTGQVTWLREDGFRYR-PNRNNISWMVCDMVEKPAKVTALMAQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V L + +L + G+ ++QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSHNLAYLQAQLDEHGVNAQIQARQLYHDREEVTVHVR 353
Query: 384 LL 385
L
Sbjct: 354 RL 355
>gi|62181490|ref|YP_217907.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|75481114|sp|Q57KD6|MTFA_SALCH Putative RNA 2'-O-ribose methyltransferase mtfA
gi|62129123|gb|AAX66826.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
Length = 366
Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats.
Identities = 205/362 (56%), Positives = 260/362 (71%), Gaps = 7/362 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ L CR GFE+E AAEITDKA ++ +FGFAR+ EN+GYVI+ECYQP D + L ELP
Sbjct: 1 MNKVVLLCRPGFEKECAAEITDKAGKREIFGFARVKENAGYVIYECYQPEDGEKLISELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQ VV +LL LP +DRITPIV Q + ++ EL VE ADTNE+KE
Sbjct: 61 FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGV-----VEKGGELRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L+ FCRKFTVPLR AL+ G L K + +H+FF+ CY GYS+ HN+S MG
Sbjct: 116 LMKFCRKFTVPLRAALRDVGVLTNYETPKRPV-VHVFFIAPGCCYTGYSFAHNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP++APSRSTLKLEEA+ FI + E L MYAVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPSDAPSRSTLKLEEALHVFIPEDEWDERLANGMYAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+VY+VD+G MA SL +TG++ EDGF+++ P R I W+VCDMVE+P+++ LM +WL
Sbjct: 235 WVYSVDNGPMAQSLMDTGQVTWLREDGFRYR-PNRNNISWMVCDMVEKPAKVTALMAQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V L + +L + G+ ++QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSHNLAYLQAQLDEHGVNAQIQARQLYHDREEVTVHVR 353
Query: 384 LL 385
L
Sbjct: 354 RL 355
>gi|77977760|ref|ZP_00833201.1| COG2933: Predicted SAM-dependent methyltransferase [Yersinia
intermedia ATCC 29909]
Length = 368
Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats.
Identities = 204/359 (56%), Positives = 270/359 (75%), Gaps = 7/359 (1%)
Query: 25 NKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPF 84
NK+ALYCR GFE+E AAEIT KAAE +FGFAR+ +NSGYV+FECYQ DAD L RE+PF
Sbjct: 3 NKIALYCRSGFEKECAAEITAKAAELEIFGFARVKDNSGYVLFECYQLEDADRLIREVPF 62
Query: 85 QQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKEL 144
++LIFARQM+VV +LL DLP +DR++PIV + ++ + EL VE DTNE+KEL
Sbjct: 63 RELIFARQMMVVGELLKDLPPEDRVSPIVGMLVGV-----IEKAGELRVEVPDTNESKEL 117
Query: 145 LGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGI 204
L FCRK TVPLR AL++Q L+A+ N + +H+FF+ + CYVGYSY++N+S MGI
Sbjct: 118 LKFCRKLTVPLRSALREQKILSARENAHRPV-VHVFFIASGCCYVGYSYSNNNSPFYMGI 176
Query: 205 QRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLF 264
RLKFP++APSRSTLKLEEA FI + E L M+AVDLGACPGGWTYQLV+R +
Sbjct: 177 PRLKFPSDAPSRSTLKLEEAFHVFIPADEWEERLASGMHAVDLGACPGGWTYQLVQRSMM 236
Query: 265 VYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLL 324
V A+D+G MA SL +TG++ H DGFK++ P R I WLVCDM+E+P+++ +L+ KWL+
Sbjct: 237 VQAIDNGAMAQSLMDTGQVTHHRVDGFKYE-PTRSNIYWLVCDMIEKPAKVTQLIIKWLV 295
Query: 325 NGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
NGWC IFNLKLPMKKR+ V + ++++ ++L + G+ +QAK LYHDREE+TV++R
Sbjct: 296 NGWCREAIFNLKLPMKKRFEIVLENIEMMDEQLKENGINAHIQAKQLYHDREEVTVHVR 354
>gi|56414929|ref|YP_152004.1| hypothetical protein SPA2844 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|81359869|sp|Q5PEK5|MTFA_SALPA Putative RNA 2'-O-ribose methyltransferase mtfA
gi|56129186|gb|AAV78692.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
Length = 366
Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats.
Identities = 204/362 (56%), Positives = 260/362 (71%), Gaps = 7/362 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNK+ L CR GFE+E AAEITDKA ++ +FGFAR+ EN+GYVI+ECYQP D + L ELP
Sbjct: 1 MNKVVLLCRPGFEKECAAEITDKAGKREIFGFARVKENAGYVIYECYQPEDGEKLISELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQ VV +LL LP +DRITP+V Q + ++ EL VE ADTNE+KE
Sbjct: 61 FSSLIFARQWFVVGELLQHLPPEDRITPVVGMLQGV-----VEKGGELRVEVADTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L+ FCRKFTVPLR AL+ G L K + +H+FF+ CY GYS+ HN+S MG
Sbjct: 116 LMKFCRKFTVPLRAALRDAGVLTNYETPKRPV-VHVFFIAPGCCYTGYSFAHNNSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP++APSRSTLKLEEA+ FI + E L MYAVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPSDAPSRSTLKLEEALHVFIPEDEWDERLANGMYAVDLGACPGGWTYQLVKRNM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+VY+VD+G MA SL +TG++ EDGF+++ P R I W+VCDMVE+P+++ LM +WL
Sbjct: 235 WVYSVDNGPMAQSLMDTGQVTWLREDGFRYR-PNRNNISWMVCDMVEKPAKVTALMAQWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+NGWC IFNLKLPMKKRY +V L + +L + G+ ++QA+ LYHDREE+TV++R
Sbjct: 294 VNGWCRETIFNLKLPMKKRYEEVSHNLAYLQAQLDEHGVNAQIQARQLYHDREEVTVHVR 353
Query: 384 LL 385
L
Sbjct: 354 RL 355
>gi|116183995|ref|ZP_01473950.1| hypothetical protein VEx2w_02003461 [Vibrio sp. Ex25]
Length = 363
Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats.
Identities = 211/362 (58%), Positives = 259/362 (71%), Gaps = 5/362 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M +L LYCR GFE+E A EI DKA + V+GF R+ NSGYV+FECYQ GDAD LAR L
Sbjct: 1 MKQLMLYCRSGFEKECAGEIQDKATQLEVYGFPRVKRNSGYVVFECYQDGDADKLARGLD 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F+ LIFARQM V+ LP DRI+PI+++ +AD A +L +ET DTNEAKE
Sbjct: 61 FKSLIFARQMFAVAAEFQSLPSDDRISPILNE---LADIEAFPRCGDLRIETPDTNEAKE 117
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVP+RQAL+ +G + K N K + LH+ F+ CYVGYSY N+S MG
Sbjct: 118 LLKFCRKFTVPMRQALRGKGLMLNKDNAKKPV-LHICFVEPGHCYVGYSYTDNNSQFFMG 176
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEA FI R + E L M+ VDLGACPGGWTYQLVKR +
Sbjct: 177 IPRLKFPADAPSRSTLKLEEAFHVFIPREEWDERLAPGMWGVDLGACPGGWTYQLVKRSM 236
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV+ VD+G MA SL ETG+I+H DGFKF+ P R+ + W+VCDMVE+P+R+A LM +WL
Sbjct: 237 FVHCVDNGMMADSLMETGQIKHHMVDGFKFE-PDRKNVTWIVCDMVEKPARVAHLMGQWL 295
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
L GW IFNLKLPMK RY +V Q L+ + L +K+RLQAKHLYHDREEIT++++
Sbjct: 296 LKGWAKEAIFNLKLPMKGRYDEVLQDLENLKQFLIDNKVKFRLQAKHLYHDREEITIHIQ 355
Query: 384 LL 385
L
Sbjct: 356 CL 357
>gi|27363781|ref|NP_759309.1| Predicted SAM-dependent methyltransferase [Vibrio vulnificus CMCP6]
gi|81449162|sp|Q8DFB2|MTFA_VIBVU Putative RNA 2'-O-ribose methyltransferase mtfA
gi|84029359|sp|Q7MN36|MTFA_VIBVY Putative RNA 2'-O-ribose methyltransferase mtfA
gi|27359897|gb|AAO08836.1|AE016797_291 Predicted SAM-dependent methyltransferase [Vibrio vulnificus CMCP6]
Length = 359
Score = 424 bits (1089), Expect = e-117, Method: Composition-based stats.
Identities = 208/357 (58%), Positives = 263/357 (73%), Gaps = 5/357 (1%)
Query: 29 LYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPFQQLI 88
LYCR GFE+E A EI DKA + V+GF R+ +N+GYV+FECYQ GDAD LAREL F LI
Sbjct: 2 LYCRQGFEKECAGEIQDKATQLEVYGFPRVFKNAGYVLFECYQDGDADKLARELDFNALI 61
Query: 89 FARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKELLGFC 148
FARQM V+ T+LP +DRI+PI+ + +I A +L +ET DTNEAKELL FC
Sbjct: 62 FARQMFAVAAEFTELPSEDRISPILAELGEID---AFPVCGDLRIETPDTNEAKELLKFC 118
Query: 149 RKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGIQRLK 208
RKFTVP+RQAL+ +G L AK N K + HL F+ + C+ GYSY+HN+S MGI RLK
Sbjct: 119 RKFTVPMRQALRGKGLLLAKENAKKPV-FHLCFVASGHCFAGYSYSHNNSRFFMGIPRLK 177
Query: 209 FPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAV 268
FPA+APSRSTLKLEEA FI R + L+ M+AVDLGACPGGWTYQLV+R +FV+ V
Sbjct: 178 FPADAPSRSTLKLEEAFHVFIPREEWDTRLSSGMWAVDLGACPGGWTYQLVQRSMFVHCV 237
Query: 269 DHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWC 328
D+G MA SL ETG+I+H DGFKF+ P R+ + WLVCDMVE+P+R+A LM +WL+ GW
Sbjct: 238 DNGMMADSLMETGQIKHHMVDGFKFE-PDRKNVTWLVCDMVEKPARVAHLMGEWLIKGWA 296
Query: 329 HSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRLL 385
IFNLKLPMK RY +V Q ++ + L + +K++LQAKHLYHDREEITV++++L
Sbjct: 297 KETIFNLKLPMKGRYDEVLQDIENLKTFLIENKVKFKLQAKHLYHDREEITVHIQVL 353
>gi|59711200|ref|YP_203976.1| methyltransferase [Vibrio fischeri ES114]
gi|75354475|sp|Q5E7A8|MTFA_VIBF1 Putative RNA 2'-O-ribose methyltransferase mtfA
gi|59479301|gb|AAW85088.1| methyltransferase [Vibrio fischeri ES114]
Length = 359
Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats.
Identities = 197/357 (55%), Positives = 261/357 (73%), Gaps = 5/357 (1%)
Query: 29 LYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPFQQLI 88
YCR GFE+E A EI DKA + VFGF R+ N+GYV+FECYQ GDAD L RE+ F +LI
Sbjct: 2 FYCRSGFEKECAGEIQDKATQLEVFGFPRLKNNTGYVLFECYQEGDADRLIREIKFNELI 61
Query: 89 FARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKELLGFC 148
FARQM V+ ++DLP+ DRI+PI+ ++D + ++ +ET DTNEAKELL FC
Sbjct: 62 FARQMFAVAAEVSDLPKDDRISPIL---DALSDVDGVPCCGDIRIETPDTNEAKELLKFC 118
Query: 149 RKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGIQRLK 208
RKFTVP+RQAL+ + L + + + + LH+ F+ CYVGYSY +N+S MGI RLK
Sbjct: 119 RKFTVPMRQALRGKKMLTERDSNRIPV-LHICFIAPGHCYVGYSYTNNNSQFFMGIPRLK 177
Query: 209 FPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAV 268
FPA+APSRSTLKLEEA FI + + + L M+ VDLGACPGGWTYQLVKR +FV+A+
Sbjct: 178 FPADAPSRSTLKLEEAFHVFIPKEEWDDRLASGMWGVDLGACPGGWTYQLVKRSMFVHAI 237
Query: 269 DHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWC 328
D+G MA SL +TG+++H DGFKF+PP R+ + WL+CDMVE+P+R+A LM +WL+ GW
Sbjct: 238 DNGMMAQSLMDTGQVKHHMVDGFKFEPP-RKNVTWLICDMVEKPARVAHLMGEWLIKGWA 296
Query: 329 HSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRLL 385
+FNLKLPMK RY +V Q ++ + D L + G +Y+LQAKHLYHDREEITV+++ +
Sbjct: 297 KEALFNLKLPMKGRYDEVLQDIENLKDFLKKNGFQYKLQAKHLYHDREEITVHIQAI 353
>gi|90580952|ref|ZP_01236753.1| putative SAM-dependent methyltransferase [Vibrio angustum S14]
gi|90437830|gb|EAS63020.1| putative SAM-dependent methyltransferase [Vibrio angustum S14]
Length = 361
Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats.
Identities = 207/362 (57%), Positives = 261/362 (72%), Gaps = 7/362 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN + LYCR GFE+E A E+ DKA +FGF R+ NSGYV+FE YQ GDAD + P
Sbjct: 1 MNHVLLYCRPGFEKECAGEVQDKANTLELFGFPRVKNNSGYVLFEFYQAGDADKFIQLQP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F QLIFARQM S +LTDLP DRI+PI+ + I + +L VET DTNEAKE
Sbjct: 61 FSQLIFARQMFAASQMLTDLPADDRISPIL---EAIGND--FPRCGDLRVETPDTNEAKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLRQA++K+ L AK N K + LH+ F+ C+VGYSY+ N+S MG
Sbjct: 116 LLKFCRKFTVPLRQAMRKREILYAKDNNKKPV-LHVCFVAPGCCFVGYSYSSNNSQFFMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEA FI RH+ E L M+ VDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPADAPSRSTLKLEEAFHVFIPRHEWDERLAPGMWGVDLGACPGGWTYQLVKRSM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV+A+D+G MA SL +TG++++ A DGFKF+ P R+ + W+VCDM+E+P+R+A LM +WL
Sbjct: 235 FVHAIDNGTMAQSLMDTGQVKYHAVDGFKFE-PARKNVTWIVCDMIEKPARVAHLMGEWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+ W IFNLKLPMK RY +V Q ++ + L Q G+K++LQAKHLYHDREEITV+++
Sbjct: 294 IKAWAKEAIFNLKLPMKGRYDEVLQDIENLKVFLIQNGVKFKLQAKHLYHDREEITVHIQ 353
Query: 384 LL 385
L
Sbjct: 354 RL 355
>gi|156973495|ref|YP_001444402.1| hypothetical protein VIBHAR_01186 [Vibrio harveyi ATCC BAA-1116]
gi|156525089|gb|ABU70175.1| hypothetical protein VIBHAR_01186 [Vibrio harveyi ATCC BAA-1116]
Length = 363
Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 206/362 (56%), Positives = 258/362 (71%), Gaps = 5/362 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M +L LYCR GFE+E A EI DKA + V+GF R+ +NSGYV+FECYQ GDAD LA+ +
Sbjct: 1 MKQLMLYCRSGFEKECAGEIQDKATQLEVYGFPRVKKNSGYVVFECYQDGDADKLAKGID 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQM V+ LP DRI+PI+ + +I A +L +ET DTNEAKE
Sbjct: 61 FSALIFARQMFAVAAEFEALPSDDRISPILAELSEIE---AFPRCGDLRIETPDTNEAKE 117
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVP+RQA++ +G + K N K + LH+ F+ CYVGYSY N+S MG
Sbjct: 118 LLKFCRKFTVPMRQAMRGKGLMWNKDNAKKPV-LHICFVAPGHCYVGYSYPGNNSQFFMG 176
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEA FI R + E L M+ VDLGACPGGWTYQLVKR +
Sbjct: 177 IPRLKFPADAPSRSTLKLEEAFHVFIPREEWDERLAPGMWGVDLGACPGGWTYQLVKRSM 236
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV+ VD+G MA SL ETG+I+H DGFKF+ P R+ + W+VCDMVE+P+R+A LM +WL
Sbjct: 237 FVHCVDNGMMADSLMETGQIKHHMVDGFKFE-PDRKNVTWIVCDMVEKPARVAHLMGQWL 295
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
L GW IFNLKLPMK RY +V Q L+ + L + +K++LQAKHLYHDREEIT++++
Sbjct: 296 LKGWAKEAIFNLKLPMKGRYDEVLQDLENLKTFLIENKVKFKLQAKHLYHDREEITIHIQ 355
Query: 384 LL 385
L
Sbjct: 356 CL 357
>gi|89075439|ref|ZP_01161856.1| putative SAM-dependent methyltransferase [Photobacterium sp. SKA34]
gi|89048855|gb|EAR54425.1| putative SAM-dependent methyltransferase [Photobacterium sp. SKA34]
Length = 361
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 207/362 (57%), Positives = 260/362 (71%), Gaps = 7/362 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN + LYCR GFE+E A E+ DKA +FGF R+ NSGYV+FE YQ GDAD + P
Sbjct: 1 MNHVLLYCRPGFEKECAGEVQDKANTLELFGFPRVKNNSGYVLFEFYQAGDADKFIQLQP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F QLIFARQM S +LTDLP DRI+PI+ + I D +L VET DTNEAKE
Sbjct: 61 FSQLIFARQMFSASQMLTDLPADDRISPIL---EAIDDE--FPRCGDLRVETPDTNEAKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLRQA++K+ L K N K + LH+ F+ C+VGYSY+ N+S MG
Sbjct: 116 LLKFCRKFTVPLRQAMRKREVLYTKDNSKKPV-LHVCFVAPGCCFVGYSYSSNNSQFFMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEA FI RH+ E L M+ VDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLKFPADAPSRSTLKLEEAFHVFIPRHEWDERLAPGMWGVDLGACPGGWTYQLVKRSM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV+A+D+G MA SL +TG++++ A DGFKF+ P R+ + W+VCDM+E+P+R+A LM +WL
Sbjct: 235 FVHAIDNGTMAQSLMDTGQVKYHAVDGFKFE-PARKNVTWIVCDMIEKPARVAHLMGEWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+ W IFNLKLPMK RY +V Q ++ + L Q G+K++LQAKHLYHDREEITV+++
Sbjct: 294 IKAWAKEAIFNLKLPMKGRYDEVLQDIENLKVFLIQNGVKFKLQAKHLYHDREEITVHIQ 353
Query: 384 LL 385
L
Sbjct: 354 RL 355
>gi|90407668|ref|ZP_01215848.1| predicted SAM-dependent methyltransferase [Psychromonas sp. CNPT3]
gi|90311259|gb|EAS39364.1| predicted SAM-dependent methyltransferase [Psychromonas sp. CNPT3]
Length = 366
Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats.
Identities = 202/362 (55%), Positives = 257/362 (70%), Gaps = 8/362 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M + LYCR GFE + A E+ DKA+ VFGF + SGYV ++CY P D LA L
Sbjct: 1 MLGILLYCRPGFENDCANEVQDKASALDVFGFIKTQRQSGYVFYQCYNPEDVLELANGLD 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
+ QLIFARQM+V+ L+ DLP +DRITPI+ T L +L+VET + +E K
Sbjct: 61 YSQLIFARQMIVIKTLIKDLPLEDRITPILEV------TRDLPMGGDLYVETPEGDETKP 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLRQALKKQ L AK N+K + HL FL N + Y+GYS N + MG
Sbjct: 115 LLTFCRKFTVPLRQALKKQKSLTAKENRK-KICYHLCFLDNQSAYIGYSLVGNRNEQYMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RL+FP+EAPSRSTLKLEEA+ TF++ + E M AVDLGACPGGWTYQLV++G+
Sbjct: 174 IMRLRFPSEAPSRSTLKLEEAVHTFLTAEEREERFTSGMRAVDLGACPGGWTYQLVRQGM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV VD+G MA +L ++G++ H EDGFKF+ P R+ I WLVCDM+E+P R+A+L+ KWL
Sbjct: 234 FVSCVDNGAMAQALMDSGQVTHYMEDGFKFE-PDRKNIYWLVCDMIEKPKRVAQLIAKWL 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+ GWC IFNLKLPMKKRY + QQ ++LI D+L + GL+Y+LQAKHLYHDREEITV++
Sbjct: 293 VEGWCKETIFNLKLPMKKRYQEAQQDIKLITDQLEEAGLQYQLQAKHLYHDREEITVHIS 352
Query: 384 LL 385
+L
Sbjct: 353 VL 354
>gi|86146931|ref|ZP_01065250.1| hypothetical protein MED222_21254 [Vibrio sp. MED222]
gi|85835383|gb|EAQ53522.1| hypothetical protein MED222_21254 [Vibrio sp. MED222]
Length = 358
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 196/357 (54%), Positives = 258/357 (72%), Gaps = 5/357 (1%)
Query: 29 LYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPFQQLI 88
LYCR GFE+E A EI DKA + VFGF R+ N+G+V+FECYQ G+AD L +E+ FQ LI
Sbjct: 1 LYCRSGFEKECAGEIQDKATQLEVFGFPRLKNNTGFVLFECYQAGEADKLVKEIDFQSLI 60
Query: 89 FARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKELLGFC 148
FARQM+ V+ + DLP DRI+PI+ + +++ ++ +ET DTNEAKELL FC
Sbjct: 61 FARQMIAVAVEIKDLPTDDRISPIL---EALSEKEGFPRCGDIRIETPDTNEAKELLKFC 117
Query: 149 RKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGIQRLK 208
RKFTVP+RQA++ +G + AK N K + LHL F+ C+VGYSY N+S MGI RLK
Sbjct: 118 RKFTVPMRQAMRGKGLMTAKDNVKKPV-LHLCFIAPGHCFVGYSYPTNNSQFFMGIPRLK 176
Query: 209 FPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAV 268
FP++APSRSTLKLEEA FI R + E L M+ VDLGACPGGWTYQLVKR +FV+ V
Sbjct: 177 FPSDAPSRSTLKLEEAFHVFIPRDEWDERLAPGMWGVDLGACPGGWTYQLVKRSMFVHCV 236
Query: 269 DHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWC 328
D+G MA SL ETG+I+H DGFKF+ P R+ + W++CDMVE+P+R+A LM +W++ GW
Sbjct: 237 DNGMMADSLMETGQIKHHMVDGFKFE-PDRKNVTWIICDMVEKPARVAHLMGEWIIKGWA 295
Query: 329 HSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRLL 385
+FNLKLPMK RY +V Q ++ + L +K+++QAKHLYHDREEITV+++ L
Sbjct: 296 KEALFNLKLPMKGRYDEVLQDIENLKQFLIDNKVKFKMQAKHLYHDREEITVHIQSL 352
>gi|84394483|ref|ZP_00993196.1| hypothetical protein V12B01_22146 [Vibrio splendidus 12B01]
gi|84374898|gb|EAP91832.1| hypothetical protein V12B01_22146 [Vibrio splendidus 12B01]
Length = 363
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 197/362 (54%), Positives = 259/362 (71%), Gaps = 5/362 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M + LYCR GFE+E A EI DKA + VFGF R+ N+G+V+FECYQ G+AD L +E+
Sbjct: 1 MKHVLLYCRSGFEKECAGEIQDKATQLEVFGFPRLKNNTGFVLFECYQAGEADKLVKEID 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
FQ LIFARQM+ V+ + DLP DRI+PI+ + +++ ++ +ET DTNEAKE
Sbjct: 61 FQSLIFARQMIAVAAEIKDLPTDDRISPIL---EALSEKEGFPRCGDIRIETPDTNEAKE 117
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVP+RQA++ +G + AK N K + LHL F+ C VGYSY N+S MG
Sbjct: 118 LLKFCRKFTVPMRQAMRGKGLMTAKDNVKKPV-LHLCFIAPGHCLVGYSYPTNNSQFFMG 176
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP++APSRSTLKLEEA FI R + E L M+ VDLGACPGGWTYQLVKR +
Sbjct: 177 IPRLKFPSDAPSRSTLKLEEAFHVFIPRDEWDERLAPGMWGVDLGACPGGWTYQLVKRSM 236
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV+ VD+G MA SL ETG+I+H DGFKF+ P R+ + W++CDMVE+P+R+A LM +W+
Sbjct: 237 FVHCVDNGMMADSLMETGQIKHHMVDGFKFE-PDRKNVTWIICDMVEKPARVAHLMGEWI 295
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+ GW +FNLKLPMK RY +V Q ++ + L +K+++QAKHLYHDREEITV+++
Sbjct: 296 IKGWAKEALFNLKLPMKGRYDEVLQDIENLKQFLIDNKVKFKMQAKHLYHDREEITVHIQ 355
Query: 384 LL 385
L
Sbjct: 356 SL 357
>gi|54310103|ref|YP_131123.1| putative SAM-dependentmethyltransferase [Photobacterium profundum
SS9]
gi|81398952|sp|Q6LN05|MTFA_PHOPR Putative RNA 2'-O-ribose methyltransferase mtfA
gi|46914542|emb|CAG21321.1| putative SAM-dependentmethyltransferase [Photobacterium profundum
SS9]
Length = 360
Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats.
Identities = 198/362 (54%), Positives = 256/362 (70%), Gaps = 8/362 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN + LYCR GFE+E A E+ DKA + +FGF R N+GYV+FE +Q GDAD + P
Sbjct: 1 MNHVILYCRPGFEKECAGEVQDKANKLELFGFPRTKNNTGYVVFEFHQQGDADKFIKLQP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQM + LLTDLPQ+DRI+PI+ + EL +ET DTNEAKE
Sbjct: 61 FSSLIFARQMFAATKLLTDLPQEDRISPILEAVK------GFPRCGELRIETPDTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLRQA++K+ L A+ + LH+ F+ C+VGYSY +N+S MG
Sbjct: 115 LLKFCRKFTVPLRQAMRKKDVLYAQ-DSTWKPVLHVCFIAPGCCFVGYSYTNNNSQFFMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP++APSRSTLKLEEA FI R + E L M+ VDLGACPGGWTYQLVKR +
Sbjct: 174 IPRLKFPSDAPSRSTLKLEEAFHVFIPRDEWDERLAPGMWGVDLGACPGGWTYQLVKRSM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV+A+D+G+MA SL +TG++++ A DGFKF+ P R+ + W+VCDM+E+P+R+A LM +WL
Sbjct: 234 FVHAIDNGQMAQSLMDTGQVKYHAVDGFKFE-PARKNVTWIVCDMIEKPARVAHLMGEWL 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+ W IFNLKLPMK RY +V Q ++ + + G+K+ LQAKHLYHDREEITV++R
Sbjct: 293 VKAWAKEAIFNLKLPMKGRYDEVLQDIENLKQYFIKNGMKFELQAKHLYHDREEITVHVR 352
Query: 384 LL 385
L
Sbjct: 353 CL 354
>gi|28897469|ref|NP_797074.1| hypothetical protein VP0695 [Vibrio parahaemolyticus RIMD 2210633]
gi|153839032|ref|ZP_01991699.1| putative RNA 2'-O-ribose methyltransferase MtfA [Vibrio
parahaemolyticus AQ3810]
gi|28805681|dbj|BAC58958.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149747502|gb|EDM58446.1| putative RNA 2'-O-ribose methyltransferase MtfA [Vibrio
parahaemolyticus AQ3810]
Length = 363
Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats.
Identities = 203/362 (56%), Positives = 256/362 (70%), Gaps = 5/362 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M +L LYCR GFE+E A EI DKA + V+GF R+ +NSGYV+FECYQ GDA+ L + L
Sbjct: 1 MKQLMLYCRSGFEKECAGEIQDKATQLEVYGFPRVKKNSGYVVFECYQDGDAEKLVKGLD 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQM V+ LP +DRI+PI+ + + + +L +ET DTNEAKE
Sbjct: 61 FSSLIFARQMFAVAAEFEALPSEDRISPILAELSEFE---SFPRCGDLRIETPDTNEAKE 117
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVP+RQAL+ +G + K N K + LH+ F+ CYVGYS N+S MG
Sbjct: 118 LLKFCRKFTVPMRQALRGKGLMWNKDNAKKPV-LHICFVAPGHCYVGYSLPGNNSQFFMG 176
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKLEEA FI R + E L M+ VDLGACPGGWTYQLVKR +
Sbjct: 177 IPRLKFPADAPSRSTLKLEEAFHVFIPRDEWDERLAPGMWGVDLGACPGGWTYQLVKRSM 236
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV+ VD+G MA SL ETG+I+H DGFKF+ P R+ + W+VCDMVE+P+R+A LM +WL
Sbjct: 237 FVHCVDNGMMADSLMETGQIKHHMVDGFKFE-PDRKNVTWIVCDMVEKPARVAHLMGQWL 295
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
L GW IFNLKLPMK RY +V Q L+ + L + +K++LQAKHLYHDREEIT++++
Sbjct: 296 LKGWAKEAIFNLKLPMKGRYDEVLQDLENLKMFLIENKVKFKLQAKHLYHDREEITIHIQ 355
Query: 384 LL 385
L
Sbjct: 356 CL 357
>gi|90413507|ref|ZP_01221498.1| putative SAM-dependentmethyltransferase [Photobacterium profundum
3TCK]
gi|90325439|gb|EAS41922.1| putative SAM-dependentmethyltransferase [Photobacterium profundum
3TCK]
Length = 360
Score = 407 bits (1045), Expect = e-112, Method: Composition-based stats.
Identities = 198/362 (54%), Positives = 256/362 (70%), Gaps = 8/362 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN + LYCR GFE+E A E+ DKA + +FGF R N+GYV+FE +Q GDAD + P
Sbjct: 1 MNHVILYCRPGFEKECAGEVQDKANKLELFGFPRTKNNTGYVVFEFHQQGDADKFIKLQP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQM + LLTDLPQ+DRI+PI+ + EL +ET DTNEAKE
Sbjct: 61 FSSLIFARQMFAATKLLTDLPQEDRISPILEAVK------GFPRCGELRIETPDTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLRQA++K+ L A+ + LH+ F+ C+VGYSY +N+S MG
Sbjct: 115 LLKFCRKFTVPLRQAMRKKEVLYAQ-DSTWKPVLHVCFIAPGCCFVGYSYTNNNSQFFMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP++APSRSTLKLEEA FI R + E L M+ VDLGACPGGWTYQLVKR +
Sbjct: 174 IPRLKFPSDAPSRSTLKLEEAFHVFIPRDEWDERLAPGMWGVDLGACPGGWTYQLVKRSM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV+A+D+G+MA SL +TG++++ A DGFKF+ P R+ + W+VCDM+E+P+R+A LM +WL
Sbjct: 234 FVHAIDNGQMAQSLMDTGQVKYHAVDGFKFE-PARKNVTWIVCDMIEKPARVAHLMGEWL 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+ W IFNLKLPMK RY +V Q ++ + + G+K+ LQAKHLYHDREEITV++R
Sbjct: 293 VKAWAKEAIFNLKLPMKGRYDEVLQDIENLKQYFIKNGMKFELQAKHLYHDREEITVHVR 352
Query: 384 LL 385
L
Sbjct: 353 CL 354
>gi|85059932|ref|YP_455634.1| hypothetical protein SG1954 [Sodalis glossinidius str. 'morsitans']
gi|84780452|dbj|BAE75229.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 366
Score = 407 bits (1045), Expect = e-112, Method: Composition-based stats.
Identities = 198/360 (55%), Positives = 248/360 (68%), Gaps = 7/360 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN + LYCR GFE+E +AE+T+KAA + +FGFAR+ +NSGYV+F CYQ +AD L R LP
Sbjct: 1 MNNVILYCRPGFEKECSAEVTEKAAAREIFGFARVKDNSGYVVFVCYQHEEADRLVRVLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
+ LIFARQM++V +LL DLP +DRIT I T A+ + E+ VE DTNE+KE
Sbjct: 61 LRSLIFARQMILVGELLRDLPAEDRITQIAGML-----TGAVAGAGEVRVEVPDTNESKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L+ FCRK TVPLR AL+ Q L + + +H+ F+ CY GYSY NHS MG
Sbjct: 116 LMKFCRKLTVPLRAALRAQRILKGE-EHRSPQVIHVLFIAPGCCYAGYSYRDNHSPFYMG 174
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RL+FP +APSRS LKLEEA FI + E L MYAVDLGACPGGWTYQLVKR +
Sbjct: 175 IPRLRFPPDAPSRSMLKLEEAFHVFIPADEWDERLGSGMYAVDLGACPGGWTYQLVKRSM 234
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V+AVD+G M +L TG++ H DGF+F+PP R + WLVCDMVE+PSR+A+L WL
Sbjct: 235 MVHAVDNGTMDEALMATGQVIHHRADGFRFEPP-RNNVYWLVCDMVEKPSRVAQLAADWL 293
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+ GWC IFNLKLPMKKRY +V Q L+L+ D L G+ + AK LYHDREE+TV+ R
Sbjct: 294 VKGWCREAIFNLKLPMKKRYEEVSQNLRLLIDHLQVNGVHGEVHAKQLYHDREEVTVHAR 353
>gi|84029358|sp|Q87RT2|MTFA_VIBPA Putative RNA 2'-O-ribose methyltransferase mtfA
Length = 359
Score = 404 bits (1037), Expect = e-111, Method: Composition-based stats.
Identities = 201/357 (56%), Positives = 253/357 (70%), Gaps = 5/357 (1%)
Query: 29 LYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPFQQLI 88
LYCR GFE+E A EI DKA + V+GF R+ +NSGYV+FECYQ GDA+ L + L F LI
Sbjct: 2 LYCRSGFEKECAGEIQDKATQLEVYGFPRVKKNSGYVVFECYQDGDAEKLVKGLDFSSLI 61
Query: 89 FARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKELLGFC 148
FARQM V+ LP +DRI+PI+ + + + +L +ET DTNEAKELL FC
Sbjct: 62 FARQMFAVAAEFEALPSEDRISPILAELSEFE---SFPRCGDLRIETPDTNEAKELLKFC 118
Query: 149 RKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGIQRLK 208
RKFTVP+RQAL+ +G + K N K + LH+ F+ CYVGYS N+S MGI RLK
Sbjct: 119 RKFTVPMRQALRGKGLMWNKDNAKKPV-LHICFVAPGHCYVGYSLPGNNSQFFMGIPRLK 177
Query: 209 FPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAV 268
FPA+APSRSTLKLEEA FI R + E L M+ VDLGACPGGWTYQLVKR +FV+ V
Sbjct: 178 FPADAPSRSTLKLEEAFHVFIPRDEWDERLAPGMWGVDLGACPGGWTYQLVKRSMFVHCV 237
Query: 269 DHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWC 328
D+G MA SL ETG+I+H DGFKF+ P R+ + W+VCDMVE+P+R+A LM +WLL GW
Sbjct: 238 DNGMMADSLMETGQIKHHMVDGFKFE-PDRKNVTWIVCDMVEKPARVAHLMGQWLLKGWA 296
Query: 329 HSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRLL 385
IFNLKLPMK RY +V Q L+ + L + +K++LQAKHLYHDREEIT++++ L
Sbjct: 297 KEAIFNLKLPMKGRYDEVLQDLENLKMFLIENKVKFKLQAKHLYHDREEITIHIQCL 353
>gi|149192513|ref|ZP_01870694.1| predicted methyltransferase [Vibrio shilonii AK1]
gi|148833654|gb|EDL50710.1| predicted methyltransferase [Vibrio shilonii AK1]
Length = 346
Score = 400 bits (1027), Expect = e-110, Method: Composition-based stats.
Identities = 194/345 (56%), Positives = 247/345 (71%), Gaps = 5/345 (1%)
Query: 41 AEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPFQQLIFARQMLVVSDLL 100
EI DKA VFGF R+ NSGYVIFECYQ GDAD L RE+ FQ LIFARQM ++ L
Sbjct: 1 GEIQDKANAIEVFGFPRVKNNSGYVIFECYQAGDADRLIREIDFQSLIFARQMFAIASEL 60
Query: 101 TDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKELLGFCRKFTVPLRQALK 160
LP +DRITP++ + I +L +ET DTNEAKELL FCRKFTVP+RQA++
Sbjct: 61 ESLPAEDRITPLLESLESIEQ---FPRCGDLRIETPDTNEAKELLKFCRKFTVPVRQAMR 117
Query: 161 KQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGIQRLKFPAEAPSRSTLK 220
+G+L K + K + LH+ F+R+ C+VGYSY N SA MGI RLKFP +APSRSTLK
Sbjct: 118 GKGYLFNKEHSKKPV-LHICFIRSGHCFVGYSYPENSSAFFMGIPRLKFPVDAPSRSTLK 176
Query: 221 LEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVDHGKMAASLHET 280
LEEA FI + + L M+ VDLGACPGGWTYQLV+R +FV+A+D+G MA SL T
Sbjct: 177 LEEAFHVFIPKEEWDTRLASGMWGVDLGACPGGWTYQLVRRSMFVHAIDNGMMADSLMNT 236
Query: 281 GRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWCHSMIFNLKLPMK 340
G+++H DGFKF+PP R+ + WLVCDMVE+P+R+A LM +WL+ GW IFNLKLPMK
Sbjct: 237 GQVKHHQVDGFKFEPP-RKNVTWLVCDMVEKPARVAHLMGEWLIRGWAKETIFNLKLPMK 295
Query: 341 KRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRLL 385
RY +V Q ++ + L + +K++LQAKHLYHDREEITV++++L
Sbjct: 296 GRYDEVLQDIENLKVFLIENKVKFKLQAKHLYHDREEITVHIQVL 340
>gi|127513689|ref|YP_001094886.1| hypothetical protein Shew_2761 [Shewanella loihica PV-4]
gi|126638984|gb|ABO24627.1| conserved hypothetical protein [Shewanella loihica PV-4]
Length = 363
Score = 397 bits (1019), Expect = e-109, Method: Composition-based stats.
Identities = 196/362 (54%), Positives = 250/362 (69%), Gaps = 9/362 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M L LYCR G+E++ AAEI +AAE V GF + N GYVIF+C+Q GDADLLA ++
Sbjct: 1 MINLFLYCRAGYEKDCAAEIQQRAAELNVGGFVKTNRNDGYVIFQCFQVGDADLLAEQIE 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIF RQM ++LL DLP+ DR+TPIV ++ + EL VET DTNEAKE
Sbjct: 61 LDSLIFTRQMFAANELLKDLPEGDRVTPIVDALAKV------HRAGELRVETPDTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRK TVPLRQALK+ G L K N K + +H+ F+ YVGYS +HN S + MG
Sbjct: 115 LSTFCRKLTVPLRQALKRSGALLEKENPKRPI-IHVCFVGPGTAYVGYSLSHNSSPYFMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK ++APSRSTLKL+EA + FI + ++ + L M +VDLGACPGGWTYQLV+RG+
Sbjct: 174 IPRLKMASDAPSRSTLKLDEAFIHFIPKSEQEQRLRSGMNSVDLGACPGGWTYQLVRRGM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV AVD+G MA +L +TG++ H DGF+F+PPK + I WLVCDMVE+PSR+AELM W
Sbjct: 234 FVAAVDNGPMAQNLMDTGQVRHYQADGFRFEPPK-KNIYWLVCDMVEKPSRVAELMEAWA 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGL-KYRLQAKHLYHDREEITVYL 382
+NGW IFNLKLPMK RY +V L + + L + G+ + L KHLYHDR+E+TV+L
Sbjct: 293 INGWFKEAIFNLKLPMKSRYKEVSTILATMQEVLRENGIDDFHLACKHLYHDRDEVTVHL 352
Query: 383 RL 384
L
Sbjct: 353 WL 354
>gi|119945329|ref|YP_943009.1| methyltransferase [Psychromonas ingrahamii 37]
gi|119863933|gb|ABM03410.1| methyltransferase [Psychromonas ingrahamii 37]
Length = 365
Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats.
Identities = 189/362 (52%), Positives = 255/362 (70%), Gaps = 8/362 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M + LYCR GFE + A E+ DKA VFGF + NSGYV ++CY P + L +L
Sbjct: 1 MLGILLYCRPGFENDCANELQDKATALEVFGFVKTKRNSGYVFYQCYDPQQVEYLLEKLD 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
++QLIFARQ++ V + DLP DRI+PI+ +I + L +L+VET + ++ K
Sbjct: 61 YKQLIFARQLIAVKAFINDLPLDDRISPIL----EITRNLPL--GGDLYVETPEGDDTKP 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FCRKFTVPLRQAL+K L AK N+ + HL FL N + Y+G+S HN S MG
Sbjct: 115 LLTFCRKFTVPLRQALRKHNSLTAKENRN-KIFYHLCFLDNKSAYIGFSVPHNRSEFYMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RL+ P+EAPSRSTLKL+EAI F++ ++ E L+ M AVDLGACPGGWTYQLV+RGL
Sbjct: 174 IPRLRSPSEAPSRSTLKLDEAIQVFLTAEEQQERLHSGMRAVDLGACPGGWTYQLVRRGL 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV A+D+G MA SL +TG++ H DGFK++ P+R+ IDWLVCDM+E+P R+A+LM +WL
Sbjct: 234 FVTAIDNGAMAQSLMDTGQVTHYTVDGFKYE-PERKNIDWLVCDMIEKPKRVAKLMGQWL 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
++GWC IFN KLPMKKRY + + ++++ D ++ L+Y LQAK LYHDREEIT+++R
Sbjct: 293 IDGWCKEAIFNFKLPMKKRYQEASEDIKILTDMFEKEDLQYELQAKQLYHDREEITLHVR 352
Query: 384 LL 385
L+
Sbjct: 353 LI 354
>gi|120599618|ref|YP_964192.1| hypothetical protein Sputw3181_2821 [Shewanella sp. W3-18-1]
gi|120559711|gb|ABM25638.1| conserved hypothetical protein [Shewanella sp. W3-18-1]
Length = 361
Score = 394 bits (1011), Expect = e-108, Method: Composition-based stats.
Identities = 192/362 (53%), Positives = 250/362 (69%), Gaps = 9/362 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M L L+CR GFE+E AAEI +A E V GF + N YV+++C++ AD L ++LP
Sbjct: 1 MKNLFLFCRAGFEKECAAEIQQRAGELNVGGFVKANNNDAYVVYQCFEDDAADTLVKQLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIFARQM SDLL DLP+ DRI+PIV ++ + E+ VET DTNEAKE
Sbjct: 61 LDSLIFARQMFAASDLLVDLPENDRISPIVAALSDVS------KAGEVRVETPDTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQ LKK G L A+ N K + +H+ F+ YVGYSY++N S H MG
Sbjct: 115 LSAFCRKFTVPLRQHLKKSGSLLAQENPKRPI-IHVCFIGPGRAYVGYSYSNNSSPHFMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK A+APSRS+LKL+EA F+ + ++ E + M AVDLGACPGGWTYQLV+RG+
Sbjct: 174 IPRLKMAADAPSRSSLKLDEAFGQFVPKEEQEERIRSGMNAVDLGACPGGWTYQLVRRGM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV AVD+G M L ETG+++H EDGF+F+ P+R+ I WLVCDMVE+P+R+AEL+ W
Sbjct: 234 FVSAVDNGPMDEKLMETGQVKHYREDGFRFE-PQRKNIYWLVCDMVEKPARVAELIEAWA 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLK-YRLQAKHLYHDREEITVYL 382
+NGW IFNLKLPMK RY +V L+ + L + G+ +++Q KHLYHDR+E+TV+L
Sbjct: 293 INGWFKEAIFNLKLPMKSRYKEVTAILETMQTILKENGVTDFKVQCKHLYHDRDEVTVHL 352
Query: 383 RL 384
L
Sbjct: 353 WL 354
>gi|124545113|ref|ZP_01704340.1| conserved hypothetical protein [Shewanella putrefaciens 200]
gi|124511300|gb|EAY55365.1| conserved hypothetical protein [Shewanella putrefaciens 200]
Length = 361
Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats.
Identities = 192/362 (53%), Positives = 250/362 (69%), Gaps = 9/362 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M L L+CR GFE+E AAEI +A E V GF + N YV+++C++ AD L ++LP
Sbjct: 1 MKNLFLFCRAGFEKECAAEIQQRAGELNVGGFVKANNNDAYVVYQCFEEDAADTLVKQLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIFARQM SDLL DLP+ DRI+PIV ++ + E+ VET DTNEAKE
Sbjct: 61 LDSLIFARQMFAASDLLVDLPENDRISPIVAALSDVS------KAGEVRVETPDTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQ LKK G L A+ N K + +H+ F+ YVGYSY++N S H MG
Sbjct: 115 LSAFCRKFTVPLRQHLKKSGSLLAQENPKRPI-IHVCFIGPGRAYVGYSYSNNSSPHFMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK A+APSRS+LKL+EA F+ + ++ E + M AVDLGACPGGWTYQLV+RG+
Sbjct: 174 IPRLKMAADAPSRSSLKLDEAFGQFVPKEEQEERIRSGMNAVDLGACPGGWTYQLVRRGM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV AVD+G M L ETG+++H EDGF+F+ P+R+ I WLVCDMVE+P+R+AEL+ W
Sbjct: 234 FVSAVDNGPMDEKLMETGQVKHYREDGFRFE-PQRKNIYWLVCDMVEKPARVAELIEAWA 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLK-YRLQAKHLYHDREEITVYL 382
+NGW IFNLKLPMK RY +V L+ + L + G+ +++Q KHLYHDR+E+TV+L
Sbjct: 293 INGWFKEAIFNLKLPMKSRYKEVTAILETMQTILKENGVTDFKVQCKHLYHDRDEVTVHL 352
Query: 383 RL 384
L
Sbjct: 353 WL 354
>gi|146292388|ref|YP_001182812.1| hypothetical protein Sputcn32_1285 [Shewanella putrefaciens CN-32]
gi|145564078|gb|ABP75013.1| conserved hypothetical protein [Shewanella putrefaciens CN-32]
Length = 361
Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats.
Identities = 192/362 (53%), Positives = 250/362 (69%), Gaps = 9/362 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M L L+CR GFE+E AAEI +A E V GF + N YV+++C++ AD L ++LP
Sbjct: 1 MKNLFLFCRAGFEKECAAEIQQRAGELNVGGFVKANNNDAYVVYQCFEEDAADTLVKQLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIFARQM SDLL DLP+ DRI+PIV ++ + E+ VET DTNEAKE
Sbjct: 61 LDSLIFARQMFAASDLLVDLPESDRISPIVAALSDVS------KAGEVRVETPDTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQ LKK G L A+ N K + +H+ F+ YVGYSY++N S H MG
Sbjct: 115 LSAFCRKFTVPLRQHLKKSGSLLAQENPKRPI-IHVCFIGPGRAYVGYSYSNNSSPHFMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK A+APSRS+LKL+EA F+ + ++ E + M AVDLGACPGGWTYQLV+RG+
Sbjct: 174 IPRLKMAADAPSRSSLKLDEAFGQFVPKEEQEERIRSGMNAVDLGACPGGWTYQLVRRGM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV AVD+G M L ETG+++H EDGF+F+ P+R+ I WLVCDMVE+P+R+AEL+ W
Sbjct: 234 FVSAVDNGPMDEKLMETGQVKHYREDGFRFE-PQRKNIYWLVCDMVEKPARVAELIEAWA 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLK-YRLQAKHLYHDREEITVYL 382
+NGW IFNLKLPMK RY +V L+ + L + G+ +++Q KHLYHDR+E+TV+L
Sbjct: 293 INGWFKEAIFNLKLPMKSRYKEVTAILETMQTILKENGVTDFKVQCKHLYHDRDEVTVHL 352
Query: 383 RL 384
L
Sbjct: 353 WL 354
>gi|113948413|ref|ZP_01434073.1| conserved hypothetical protein [Shewanella baltica OS195]
gi|152999885|ref|YP_001365566.1| hypothetical protein Shew185_1353 [Shewanella baltica OS185]
gi|113909298|gb|EAU27943.1| conserved hypothetical protein [Shewanella baltica OS195]
gi|151364503|gb|ABS07503.1| conserved hypothetical protein [Shewanella baltica OS185]
Length = 361
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 191/362 (52%), Positives = 250/362 (69%), Gaps = 9/362 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M L L+CR GFE+E AAEI +A E V GF + N YV+++C++ AD L ++LP
Sbjct: 1 MKNLFLFCRAGFEKECAAEIQQRAGELNVGGFVKANNNDAYVVYQCFEDDAADTLVKQLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIFARQM SDLL DLP+ DRI+PIV ++ + E+ VET DTNEAKE
Sbjct: 61 LDSLIFARQMFAASDLLVDLPENDRISPIVAALSDVS------KAGEVRVETPDTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQ LKK G L A+ N K + +H+ F+ YVGYSY++N S H MG
Sbjct: 115 LSAFCRKFTVPLRQHLKKSGSLLAQENPKRPI-IHVCFIGPGRAYVGYSYSNNSSPHFMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK A+APSRS+LKL+EA F+ + ++ E + M +VDLGACPGGWTYQLV+RG+
Sbjct: 174 IPRLKMAADAPSRSSLKLDEAFGQFVPKEEQEERIRSGMNSVDLGACPGGWTYQLVRRGM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV AVD+G M L ETG+++H EDGF+F+ P+R+ I WLVCDMVE+P+R+AEL+ W
Sbjct: 234 FVSAVDNGPMDEKLMETGQVKHYREDGFRFE-PQRKNIYWLVCDMVEKPARVAELIEAWA 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLK-YRLQAKHLYHDREEITVYL 382
+NGW IFNLKLPMK RY +V L+ + L + G+ +++Q KHLYHDR+E+TV+L
Sbjct: 293 INGWFKEAIFNLKLPMKSRYKEVTAILETMQTILKENGVSDFKVQCKHLYHDRDEVTVHL 352
Query: 383 RL 384
L
Sbjct: 353 WL 354
>gi|126173605|ref|YP_001049754.1| hypothetical protein Sbal_1367 [Shewanella baltica OS155]
gi|149118042|ref|ZP_01844658.1| conserved hypothetical protein [Shewanella baltica OS223]
gi|125996810|gb|ABN60885.1| conserved hypothetical protein [Shewanella baltica OS155]
gi|146861395|gb|EDK47627.1| conserved hypothetical protein [Shewanella baltica OS223]
Length = 361
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 191/362 (52%), Positives = 250/362 (69%), Gaps = 9/362 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M L L+CR GFE+E AAEI +A E V GF + N YV+++C++ AD L ++LP
Sbjct: 1 MKNLFLFCRAGFEKECAAEIQQRAGELNVGGFVKANNNDAYVVYQCFEDDAADTLVKQLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIFARQM SDLL DLP+ DRI+PIV ++ + E+ VET DTNEAKE
Sbjct: 61 LDSLIFARQMFAASDLLVDLPENDRISPIVAALSDVS------KAGEVRVETPDTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQ LKK G L A+ N K + +H+ F+ YVGYSY++N S H MG
Sbjct: 115 LSAFCRKFTVPLRQHLKKSGSLLAQENPKRPI-IHVCFIGPGRAYVGYSYSNNSSPHFMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK A+APSRS+LKL+EA F+ + ++ E + M +VDLGACPGGWTYQLV+RG+
Sbjct: 174 IPRLKMAADAPSRSSLKLDEAFGQFVPKEEQEERIRSGMNSVDLGACPGGWTYQLVRRGM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV AVD+G M L ETG+++H EDGF+F+ P+R+ I WLVCDMVE+P+R+AEL+ W
Sbjct: 234 FVSAVDNGPMDEKLMETGQVKHYREDGFRFE-PQRKNIYWLVCDMVEKPARVAELIEAWA 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLK-YRLQAKHLYHDREEITVYL 382
+NGW IFNLKLPMK RY +V L+ + L + G+ +++Q KHLYHDR+E+TV+L
Sbjct: 293 INGWFKEAIFNLKLPMKSRYKEVTAILETMQTILKENGVTDFKVQCKHLYHDRDEVTVHL 352
Query: 383 RL 384
L
Sbjct: 353 WL 354
>gi|118754391|ref|ZP_01602188.1| conserved hypothetical protein [Shewanella pealeana ATCC 700345]
gi|118694053|gb|EAW00273.1| conserved hypothetical protein [Shewanella pealeana ATCC 700345]
Length = 360
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 192/362 (53%), Positives = 250/362 (69%), Gaps = 9/362 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M L L+CR G+E++ AAEI +AAE + GF + N YVIF+C+Q GDA++LA+ +
Sbjct: 1 MINLFLFCRAGYEKDCAAEIQVRAAELDIGGFVKTNTNDAYVIFQCFQAGDAEVLAKNIS 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIFARQM +LL LP+QDRI+PIV Q+ + EL VET DTNEAKE
Sbjct: 61 LDSLIFARQMFAAKELLKGLPEQDRISPIVEALTQV------NKAGELRVETPDTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
FCRKFTVPLRQALKK G L K N K + +H+ F+ + YVGYS ++N S + MG
Sbjct: 115 RSNFCRKFTVPLRQALKKSGALLEKENPKRPI-IHVCFVASGQAYVGYSLSNNSSPYFMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK A+APSRSTLKL+EA + FI + ++ L+ M AVDLGACPGGWTYQLV+RG+
Sbjct: 174 IPRLKIAADAPSRSTLKLDEAFIHFIPKEEQETRLSSGMKAVDLGACPGGWTYQLVRRGM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV AVD+G M L +TG+++H DGF+F+PP R+ I WLVCDM+E+PSR+AEL+ W
Sbjct: 234 FVAAVDNGPMDQGLMDTGQVKHYQADGFRFEPP-RKNITWLVCDMIEKPSRVAELIEAWA 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGL-KYRLQAKHLYHDREEITVYL 382
+NGW IFNLKLPMK RY +V L + + L + G+ + + AKHLYHDR+E+TV+L
Sbjct: 293 INGWFKESIFNLKLPMKARYKEVSTILATMEEILKENGVDDFSIAAKHLYHDRDEVTVHL 352
Query: 383 RL 384
L
Sbjct: 353 CL 354
>gi|24373109|ref|NP_717152.1| hypothetical protein SO_1536 [Shewanella oneidensis MR-1]
gi|81462497|sp|Q8EGQ9|MTFA_SHEON Putative RNA 2'-O-ribose methyltransferase mtfA
gi|24347298|gb|AAN54596.1|AE015599_8 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 361
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 190/362 (52%), Positives = 251/362 (69%), Gaps = 9/362 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M L L+CR G+E+E AAEI +AAE V GF + N YV+++C++ AD L ++LP
Sbjct: 1 MKNLFLFCRAGYEKECAAEIQQRAAELNVGGFVKTNNNDAYVVYQCFEDDGADTLVKQLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIFARQM S+LL DLP+ DR++PIV +++ + EL VET DTNEAKE
Sbjct: 61 LDSLIFARQMFAASELLADLPESDRVSPIVAALSEVS------KAGELRVETPDTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQ LKK G L A+ N K + +H+ F+ Y GYS ++N S + MG
Sbjct: 115 LSAFCRKFTVPLRQHLKKSGSLLAQENPKRPI-IHVCFIGPGRAYAGYSLSNNSSPNFMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK A+APSRS+LKL+EA F+ + ++ E + M AVDLGACPGGWTYQLV+RG+
Sbjct: 174 IPRLKMAADAPSRSSLKLDEAFAQFVPKEEQEERVRSGMNAVDLGACPGGWTYQLVRRGM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV AVD+G M L ETG+++H EDGF+F+ P+R+ I WLVCDMVE+P+R+AEL+ W
Sbjct: 234 FVSAVDNGPMNEKLMETGQVKHFREDGFRFE-PQRKNIYWLVCDMVEKPARVAELIEAWA 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGL-KYRLQAKHLYHDREEITVYL 382
+NGW IFNLKLPMK RY +V L + D L + G+ +++LQ KHLYHDR+E+TV+L
Sbjct: 293 INGWFKEAIFNLKLPMKSRYKEVMAILNTMQDILKENGITEFKLQCKHLYHDRDEVTVHL 352
Query: 383 RL 384
L
Sbjct: 353 WL 354
>gi|119775560|ref|YP_928300.1| hypothetical protein Sama_2426 [Shewanella amazonensis SB2B]
gi|119768060|gb|ABM00631.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 361
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 192/362 (53%), Positives = 245/362 (67%), Gaps = 9/362 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M L LYCR G+E++ AAEI +AAE G+ GF + + YV+F+ + P D D LA+ELP
Sbjct: 1 MKNLFLYCRAGYEKDCAAEIQQRAAELGIGGFVKANRDDAYVVFQGFSPDDGDRLAKELP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIFARQM DLL D +DR+TPI ++ + + EL VET DTNEAKE
Sbjct: 61 LDSLIFARQMFACGDLLDDFSPEDRVTPIAESLTEV------ERAGELRVETPDTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQALKK+G L K + + + +H+ F+ N + GYS ++N S H MG
Sbjct: 115 LSAFCRKFTVPLRQALKKRGVLLDKESSRRPI-VHVCFVAPNKAFTGYSLSNNSSPHFMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFPA+APSRSTLKL+EA + FI R + L + AVDLGACPGGWTYQLV+RG+
Sbjct: 174 IPRLKFPADAPSRSTLKLDEAFIHFIPREEHETRLRSGLNAVDLGACPGGWTYQLVRRGM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V+A+D+G M L ETG++ H DGFKF+ P RR I WLVCDMVE+P+R+AELM W
Sbjct: 234 MVHAIDNGPMNHDLMETGQVTHHRADGFKFE-PARRNIYWLVCDMVEKPARVAELMEYWA 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGL-KYRLQAKHLYHDREEITVYL 382
+ GW IFNLKLPMK RY +V Q L + L + G+ ++ L KHLYHDR+E+TV+L
Sbjct: 293 IQGWFKEAIFNLKLPMKSRYKEVSQILANMHAILKENGIHEFHLACKHLYHDRDEVTVHL 352
Query: 383 RL 384
L
Sbjct: 353 WL 354
>gi|118073219|ref|ZP_01541402.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
gi|118022291|gb|EAV36112.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
Length = 358
Score = 387 bits (995), Expect = e-106, Method: Composition-based stats.
Identities = 189/362 (52%), Positives = 251/362 (69%), Gaps = 9/362 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M L LYCR G+E+E AAEI +AAE + GF + + GYVIF+C+Q GDA++LA+++
Sbjct: 1 MINLFLYCRSGYEKECAAEIQHRAAELEIGGFVKTNKKDGYVIFQCFQAGDANILAQKIK 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIFARQM +LL +LP+ DRITPI+ + +N+ EL VET DTNEAKE
Sbjct: 61 LDSLIFARQMFAAKELLKNLPEHDRITPIMEALSDV------RNAGELRVETPDTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
FCRKFTVPLRQ LK G L K N + +H+ F+ + YVG+S+++N S + MG
Sbjct: 115 RTAFCRKFTVPLRQKLKNAGNLLKKENSSRPI-IHVCFVASGTAYVGFSFSNNSSPYPMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK ++APSRSTLKL+EA + FI ++ + L+ M AVDLGACPGGWTYQLV+RG+
Sbjct: 174 IPRLKMASDAPSRSTLKLDEAFIHFIPEEEQEQRLSSGMNAVDLGACPGGWTYQLVRRGM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV AVD+G M L ETG+++H DGF+F+PP R+ I WLVCDM+E+PSR+AEL+ W
Sbjct: 234 FVAAVDNGPMDEGLMETGQVKHYQADGFRFEPP-RKNIYWLVCDMIEKPSRVAELIEAWA 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLK-YRLQAKHLYHDREEITVYL 382
+NGW +FNLKLPMK RY V L+ +A L + +K + ++ KHLYHDR+E+TVYL
Sbjct: 293 INGWFKEAMFNLKLPMKSRYQDVSTILETMATVLEENEIKNFSIKCKHLYHDRDEVTVYL 352
Query: 383 RL 384
L
Sbjct: 353 SL 354
>gi|91793913|ref|YP_563564.1| hypothetical protein Sden_2562 [Shewanella denitrificans OS217]
gi|91715915|gb|ABE55841.1| conserved hypothetical protein [Shewanella denitrificans OS217]
Length = 367
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 190/359 (52%), Positives = 245/359 (68%), Gaps = 6/359 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M L L+CR G+E+E AAEI +AAE V GF + N YVI++C++ AD LA+ LP
Sbjct: 1 MKNLFLFCRAGYEKECAAEIQQRAAEMNVGGFVKTTNNDAYVIYQCFEDDGADTLAKMLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIFARQM S+L +DLP+QDR+ P+V + AD + EL VET DTNEAKE
Sbjct: 61 LNSLIFARQMFAASELHSDLPEQDRVGPLVASLLE-AD---VTKCGELRVETPDTNEAKE 116
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQ LKK G L K N + + +H+ F+ YVGYS ++N S H MG
Sbjct: 117 LSAFCRKFTVPLRQGLKKVGVLLDKENGRRPI-IHVCFVGPGKAYVGYSLSNNSSPHFMG 175
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RL+ A+APSRS+LKL+EA F+++ ++ + AVDLGACPGGWTYQLV+RG+
Sbjct: 176 IPRLRMAADAPSRSSLKLDEAFGAFLTKEEQEMRCRSGLKAVDLGACPGGWTYQLVRRGM 235
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V AVD+G M L ETG+++H DGF+F+PP R+ I WLVCDMVE+PSR+AELM W
Sbjct: 236 MVAAVDNGPMDEKLMETGQVKHYRADGFRFEPP-RKNIYWLVCDMVEKPSRVAELMEAWA 294
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYL 382
+NGW IFNLKLPMK RY +V+ L + + + + YRLQ KHLYHDR+E+TV+L
Sbjct: 295 INGWFKEAIFNLKLPMKSRYKEVRVILDTMGEIFKENEIDYRLQCKHLYHDRDEVTVHL 353
>gi|114048284|ref|YP_738834.1| hypothetical protein Shewmr7_2792 [Shewanella sp. MR-7]
gi|113889726|gb|ABI43777.1| conserved hypothetical protein [Shewanella sp. MR-7]
Length = 361
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 187/360 (51%), Positives = 250/360 (69%), Gaps = 9/360 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M L L+CR G+E+E AAEI +AAE V GF + N YV+++C++ D+L ++LP
Sbjct: 1 MKNLFLFCRAGYEKECAAEIQQRAAELNVGGFVKANNNDAYVVYQCFEEDGGDILVKQLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIFARQM S+LL DLP+ DR++PIV ++ + EL VET DTNEAKE
Sbjct: 61 LDSLIFARQMFAASELLADLPESDRVSPIVAALSDVS------KAGELRVETPDTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQ LKK G L A+ N K + +H+ F+ YVGYS+++N S + MG
Sbjct: 115 LSAFCRKFTVPLRQHLKKSGSLLAQENPKRPI-IHVCFIGPGRAYVGYSFSNNSSPYFMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK A+APSRS+LKL+EA F+ + ++ E + M AVDLGACPGGWTYQLV+RG+
Sbjct: 174 IPRLKMAADAPSRSSLKLDEAFAQFVPKEEQEERVRSGMNAVDLGACPGGWTYQLVRRGM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V AVD+G M L ETG+++H EDGF+F+ P+R+ I WLVCDMVE+P+R+AEL+ W
Sbjct: 234 MVSAVDNGPMNEKLMETGQVKHFREDGFRFE-PQRKNIYWLVCDMVEKPARVAELIEAWA 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGL-KYRLQAKHLYHDREEITVYL 382
+NGW IFNLKLPMK RY +V L + + L + G+ +++LQ KHLYHDR+E+TV+L
Sbjct: 293 INGWFKEAIFNLKLPMKSRYKEVMAILNTMQEILKENGINEFQLQCKHLYHDRDEVTVHL 352
>gi|113971056|ref|YP_734849.1| hypothetical protein Shewmr4_2721 [Shewanella sp. MR-4]
gi|113885740|gb|ABI39792.1| conserved hypothetical protein [Shewanella sp. MR-4]
Length = 361
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 186/360 (51%), Positives = 248/360 (68%), Gaps = 9/360 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M L L+CR G+E+E AAEI +AAE V GF + N YV+++C++ D L ++LP
Sbjct: 1 MKNLFLFCRAGYEKECAAEIQQRAAELNVGGFVKANNNDAYVVYQCFEEDGGDTLVKQLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIFARQM S+LL DLP+ DR++PIV ++ + EL VET DTNEAKE
Sbjct: 61 LDSLIFARQMFAASELLADLPESDRVSPIVAALSDVS------KAGELRVETPDTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQ LKK G L A+ N K + +H+ F+ Y GYS+++N S + MG
Sbjct: 115 LSAFCRKFTVPLRQHLKKSGSLLAQENPKRPI-IHVCFIGPGRAYAGYSFSNNSSPYFMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK A+APSRS+LKL+EA F+ + ++ E + M AVDLGACPGGWTYQLV+RG+
Sbjct: 174 IPRLKMAADAPSRSSLKLDEAFAQFVPKEEQEERVRSGMNAVDLGACPGGWTYQLVRRGM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V AVD+G M L ETG+++H EDGF+F+ P+R+ I WLVCDMVE+P+R+AEL+ W
Sbjct: 234 MVSAVDNGPMNEKLMETGQVKHFREDGFRFE-PQRKNIYWLVCDMVEKPARVAELIEAWA 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGL-KYRLQAKHLYHDREEITVYL 382
+NGW IFNLKLPMK RY +V L + + L + G+ +++LQ KHLYHDR+E+TV+L
Sbjct: 293 INGWFKEAIFNLKLPMKSRYKEVMAILNTMQEILKENGINEFQLQCKHLYHDRDEVTVHL 352
>gi|117921332|ref|YP_870524.1| hypothetical protein Shewana3_2891 [Shewanella sp. ANA-3]
gi|117613664|gb|ABK49118.1| conserved hypothetical protein [Shewanella sp. ANA-3]
Length = 361
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 186/360 (51%), Positives = 249/360 (69%), Gaps = 9/360 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M L L+CR G+E+E AAEI +AAE V GF + N YV+++C++ D L ++LP
Sbjct: 1 MKNLFLFCRAGYEKECAAEIQQRAAELNVGGFVKANNNDAYVVYQCFEEDGGDTLVKQLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIFARQM S+LL DLP+ DR++PIV +++ + EL VET DTNEAKE
Sbjct: 61 LDSLIFARQMFAASELLADLPESDRVSPIVAALSEVS------KAGELRVETPDTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKFTVPLRQ LKK G L A+ N K + +H+ F+ YVGYS+++N S + MG
Sbjct: 115 LSAFCRKFTVPLRQHLKKSGSLLAQENPKRPI-IHVCFIGPGRAYVGYSFSNNSSPYFMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK A+APSRS+LKL+EA F+ + ++ + M AVDLGACPGGWTYQLV+RG+
Sbjct: 174 IPRLKMAADAPSRSSLKLDEAFAQFVPKEEQEVRVRSGMNAVDLGACPGGWTYQLVRRGM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V AVD+G M L ETG+++H EDGF+F+ P+R+ I WLVCDMVE+P+R+AEL+ W
Sbjct: 234 MVSAVDNGPMNEKLMETGQVKHFREDGFRFE-PQRKNIYWLVCDMVEKPARVAELIEAWA 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGL-KYRLQAKHLYHDREEITVYL 382
+NGW IFNLKLPMK RY +V L + + L + G+ +++LQ KHLYHDR+E+TV+L
Sbjct: 293 INGWFKEAIFNLKLPMKSRYKEVMAILNTMQEILKENGINEFQLQCKHLYHDRDEVTVHL 352
>gi|114563945|ref|YP_751459.1| hypothetical protein Sfri_2780 [Shewanella frigidimarina NCIMB 400]
gi|114335238|gb|ABI72620.1| conserved hypothetical protein [Shewanella frigidimarina NCIMB 400]
Length = 362
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 184/360 (51%), Positives = 242/360 (67%), Gaps = 10/360 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M L L+CR G+E++ AAEI +A E V GF + N YVI++C+ AD L +EL
Sbjct: 1 MKNLFLFCRSGYEKDCAAEIQQRATELNVGGFVKTNINDAYVIYQCFDDNGADTLVKELA 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
L+FARQM +LL+DLP+QDR+ PIV A AL EL VET DTNEAKE
Sbjct: 61 LSSLVFARQMFAAGELLSDLPEQDRVGPIV------ASLAALSKCGELRVETPDTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQG-WLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLM 202
L FCRK TVPLRQ LKK G LNA+ +++ +H+ F+ Y GYS +HN S H M
Sbjct: 115 LSAFCRKLTVPLRQGLKKSGALLNAESDRRP--IIHVCFIGPGKAYAGYSLSHNSSPHFM 172
Query: 203 GIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRG 262
GI RL+ A+APSRS+LKL+EA F+++ ++ + AVDLGACPGGWTYQLV+RG
Sbjct: 173 GIPRLRMAADAPSRSSLKLDEAFGAFLTKEEQETRCRSGLNAVDLGACPGGWTYQLVRRG 232
Query: 263 LFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKW 322
+ V AVD+G M L ETG+++H DGF+F+PP R+ + WLVCDMVE+P+R+AELM W
Sbjct: 233 MMVAAVDNGPMDPKLMETGQVKHYRADGFRFEPP-RKNVYWLVCDMVEKPARVAELMEAW 291
Query: 323 LLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYL 382
+NGW IFNLKLPMK RY +V L+ I L++ + +++Q KHLYHDR+E+TV+L
Sbjct: 292 AINGWFKEAIFNLKLPMKSRYKEVSVILETIGAILTENEIDFKMQCKHLYHDRDEVTVHL 351
>gi|149907574|ref|ZP_01896321.1| hypothetical protein PE36_06792 [Moritella sp. PE36]
gi|149809244|gb|EDM69173.1| hypothetical protein PE36_06792 [Moritella sp. PE36]
Length = 378
Score = 377 bits (967), Expect = e-103, Method: Composition-based stats.
Identities = 188/378 (49%), Positives = 248/378 (65%), Gaps = 29/378 (7%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN + LYCR G+E+E AAEI +A +GFA++ NSGYV+FEC+ D D +A++LP
Sbjct: 1 MNGILLYCRPGYEKECAAEIQVRATAMEAYGFAKVTLNSGYVVFECHSAEDVDSIAKKLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIFARQM+ + + D+P DR+ P+V A ++ EL VE DTNE KE
Sbjct: 61 LSSLIFARQMIALHARVDDMPLYDRVNPVV------AACEGIELMGELRVEMPDTNEGKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRK+TVPLRQ+L+K L K N K LH+FF+ N + Y+GYSY+ N+S MG
Sbjct: 115 LSKFCRKYTVPLRQSLRKGNHLLPKEN-KNRPVLHVFFITNTSVYIGYSYSFNNSPLPMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP++APSRSTLKLEEA TFI Q + M AVDLGACPGGWTYQLV+R +
Sbjct: 174 IMRLKFPSKAPSRSTLKLEEAFHTFIPADQWDRRIGGAMRAVDLGACPGGWTYQLVQRSM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQP-------------------PKRRKIDWL 304
FV AVD+G MA +L ETG+++H EDGFK++P P+ +D L
Sbjct: 234 FVVAVDNGAMADNLMETGQVKHYEEDGFKYEPAKTTIAWTNRKLNGNKVKVPENPPVDML 293
Query: 305 VCDMVEQPSRIAELMTKWLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKY 364
VCDM+E+P R+ LM KWLLN WC IFNLKLP+K+RY ++ CL ++ +L ++
Sbjct: 294 VCDMLEKPERVTRLMCKWLLNAWCKEAIFNLKLPLKRRYHTLEDCLAILDKQLDD---RF 350
Query: 365 RLQAKHLYHDREEITVYL 382
+QAKHLYHDR+E+TV++
Sbjct: 351 VIQAKHLYHDRDEVTVHV 368
>gi|150381523|ref|ZP_01920525.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
gi|150253433|gb|EDM91143.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
Length = 360
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 184/362 (50%), Positives = 247/362 (68%), Gaps = 9/362 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M L L+CR G+E+E AAEI +AAE + GF + +N YVIF+C+Q GDA +LA+++
Sbjct: 1 MINLFLFCRAGYEKECAAEIQHRAAELDIGGFVKTNKNDAYVIFQCFQAGDAAVLAQKIK 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIFARQM LL +LP+ DRITPI+ + +N+ EL VET DT+ AKE
Sbjct: 61 LDSLIFARQMFAAKALLKNLPENDRITPIMEALSDV------RNAGELRVETPDTDAAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
FCRKFTVPLRQ LK G L K + + +H+ F+ + YVG+S+++N S + MG
Sbjct: 115 RTTFCRKFTVPLRQKLKNSGNLLKKESSSRPI-IHVCFVASGTAYVGFSFSNNSSPYPMG 173
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK ++APSRSTLKL+EA + FI ++ L+ M AVDLGACPGGWTYQLV+RG+
Sbjct: 174 IPRLKMASDAPSRSTLKLDEAFIHFIPEEEKELRLSSGMNAVDLGACPGGWTYQLVRRGM 233
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV A+D+G M L ETG+++H DGF+F+PP R+ I WLVCDM+E+PSR+AEL+ W
Sbjct: 234 FVAAIDNGAMDEGLMETGQVKHYQADGFRFEPP-RKNIYWLVCDMIEKPSRVAELIEAWA 292
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLK-YRLQAKHLYHDREEITVYL 382
+NGW +FNLKLPMK RY V L+ +A L + +K + ++ KHLYHDR+E+TVYL
Sbjct: 293 INGWFKEAMFNLKLPMKSRYQDVTTILETMATVLKENEIKNFSIKCKHLYHDRDEVTVYL 352
Query: 383 RL 384
L
Sbjct: 353 SL 354
>gi|88861354|ref|ZP_01135984.1| RNA 2'-O-ribose methyltransferase, SAM-dependent domain
[Pseudoalteromonas tunicata D2]
gi|88816620|gb|EAR26445.1| RNA 2'-O-ribose methyltransferase, SAM-dependent domain
[Pseudoalteromonas tunicata D2]
Length = 361
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 183/362 (50%), Positives = 249/362 (68%), Gaps = 9/362 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M+ + +YCR GFE + AAEIT A E V G+ + N+G+V+F+C+ D+ L +++
Sbjct: 1 MSCIVIYCRPGFESDAAAEITHHATELNVAGYVKTKPNTGFVVFQCFNADDSATLIKQVD 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F QL+FARQ L+ +LPQ DR++ I + I + S+L VET DTNE KE
Sbjct: 61 FAQLVFARQWFC-GVLVEELPQTDRVSAIANAL------IDMPTGSDLRVETPDTNEGKE 113
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FC+K TVPLR L Q L K +LH+ FL N YVGYS+N+N+S MG
Sbjct: 114 LLKFCKKITVPLRNKLVAQRSLVKDGPSKLP-SLHILFLDNATAYVGYSWNNNNSDFFMG 172
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RL+FP+ APSRSTLKL+EA + F+ ++ + L+ M AVDLGACPGGWTYQLV+RG+
Sbjct: 173 IPRLRFPSAAPSRSTLKLDEAFIVFVPEAEKEKRLSPGMRAVDLGACPGGWTYQLVRRGM 232
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV A+D+G MA SL +TG+++H DGFKF+P K R IDWLVCDMVE+P ++ +LM W
Sbjct: 233 FVQAIDNGPMAQSLMDTGQVKHYTVDGFKFRPEK-RNIDWLVCDMVEKPDKVTQLMIDWA 291
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+N + +IFNLKLPMKKR+ V + L LI ++++ G++Y LQAKHLYHDREE+TV+LR
Sbjct: 292 VNDFVKELIFNLKLPMKKRFDSVYENLALIHSEMNKYGIEYALQAKHLYHDREEVTVHLR 351
Query: 384 LL 385
++
Sbjct: 352 VI 353
>gi|119472542|ref|ZP_01614590.1| predicted methyltransferase [Alteromonadales bacterium TW-7]
gi|119444866|gb|EAW26166.1| predicted methyltransferase [Alteromonadales bacterium TW-7]
Length = 361
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 181/363 (49%), Positives = 250/363 (68%), Gaps = 13/363 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M+ + +YCR GFE + AAEIT AAE+G G+ + N+GYVI+EC++ +D + +++
Sbjct: 1 MSSVVIYCRSGFENDAAAEITFHAAEQGFAGYVKAKPNTGYVIYECFEAQHSDEIIKKID 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F+ ++FARQ LL D+P +DR+ +V Q A L +EL VET DTNE KE
Sbjct: 61 FKNMVFARQWFA-GTLLEDMPLEDRVGAVV----QAAKDFPL--CAELRVETPDTNEGKE 113
Query: 144 LLGFCRKFTVPLRQALKKQGWL--NAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHL 201
LL FC+K + PL++AL+KQ + +K N+ +H+ FL NN YVGYSY++N+S +
Sbjct: 114 LLTFCKKISTPLKKALEKQNTVLRESKANRP---VMHVLFLENNTAYVGYSYSYNNSPNF 170
Query: 202 MGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKR 261
MGI RL+ P + PSRSTLKL+EA FI Q + M VDLGACPGGWTYQLV+R
Sbjct: 171 MGILRLRMPNDGPSRSTLKLDEAFNVFIPEQQRETRVAAGMRCVDLGACPGGWTYQLVRR 230
Query: 262 GLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTK 321
G+FV A+D+G M +L ETG+++H EDGFK++P K R I WLVCDMVE+P+++ LM
Sbjct: 231 GMFVNAIDNGPMNDNLMETGQVKHFREDGFKYRPEK-RNITWLVCDMVEKPTKVTSLMID 289
Query: 322 WLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVY 381
W +N + +IFNLKLPMKKR+ V +CL +I ++L++ G+ Y LQAKHLYHDREEITV+
Sbjct: 290 WAVNAYAKELIFNLKLPMKKRFDSVYECLAMIKEELAKYGISYELQAKHLYHDREEITVH 349
Query: 382 LRL 384
L +
Sbjct: 350 LNV 352
>gi|117619180|ref|YP_855691.1| methyltransferase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117560587|gb|ABK37535.1| methyltransferase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 364
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 192/361 (53%), Positives = 247/361 (68%), Gaps = 12/361 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L LYCR GFE+E AAEIT++A+ +GFAR+ ++SGYVIFE Y ADLLAR+LP
Sbjct: 1 MNNLLLYCRPGFEKEAAAEITERASNMQCYGFARVKDDSGYVIFELYDEEQADLLARKLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F++LIF RQMLVV+ L DL DRITPI+ Q A +L VETADTNEAKE
Sbjct: 61 FRELIFIRQMLVVTHELKDLDLSDRITPILEATQGYAIC------GDLRVETADTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAK--PNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHL 201
L FCRKFTVPLRQAL+ L K P++ H FFL N+ +GYSY+ N+S
Sbjct: 115 LSAFCRKFTVPLRQALRGNELLTKKETPHRP---VFHAFFLANDHVLLGYSYSFNNSEFH 171
Query: 202 MGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKR 261
MGI RL+ PA+APSRS+LKLEEA F+ R + L M AVDLGACPGGWTYQLV+R
Sbjct: 172 MGIPRLRCPADAPSRSSLKLEEAFYVFVPREEWDMRLTSGMKAVDLGACPGGWTYQLVRR 231
Query: 262 GLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTK 321
G+ V AVD+G MA SL +TG+++H +DGF ++P K+ WLVCDMV++P+R+ ++
Sbjct: 232 GMMVTAVDNGMMAQSLMDTGQVKHIRDDGFVWRPSKKNTY-WLVCDMVDKPARVTHMIAD 290
Query: 322 WLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVY 381
W C +FNLKLPMKKRYA+ ++++ + L + + +QAK LYHDREEITV+
Sbjct: 291 WFRESDCQEAMFNLKLPMKKRYAEAVHNIEVLRELLKEIDNAFVIQAKQLYHDREEITVH 350
Query: 382 L 382
+
Sbjct: 351 V 351
>gi|145300085|ref|YP_001142926.1| hypothetical protein ASA_3185 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142852857|gb|ABO91178.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 364
Score = 367 bits (943), Expect = e-100, Method: Composition-based stats.
Identities = 190/361 (52%), Positives = 248/361 (68%), Gaps = 12/361 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L LYCR GFE+E AAEIT++A+ +GFAR+ ++SGYVIFE Y ADLLAR+LP
Sbjct: 1 MNNLLLYCRPGFEKEAAAEITERASNMQCYGFARVKDDSGYVIFELYDEEQADLLARKLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F++LIF RQMLVV+ L DL DRI+PI+ + TI +L VETADTNEAKE
Sbjct: 61 FRELIFIRQMLVVTHELKDLDVADRISPIIEATSEY--TIC----GDLRVETADTNEAKE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAK--PNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHL 201
L FCRKFTVPLRQAL+ + L K P++ H FF+ N+ +GYSY+ N+S
Sbjct: 115 LSAFCRKFTVPLRQALRSKELLTKKETPHRP---VFHAFFMANDHLLLGYSYSFNNSEFH 171
Query: 202 MGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKR 261
MGI RL+ P +APSRS+LKLEEA F+ R + L M AVDLGACPGGWT+QLV+R
Sbjct: 172 MGIPRLRCPPDAPSRSSLKLEEAFYVFVPREEWDLRLTSGMKAVDLGACPGGWTHQLVRR 231
Query: 262 GLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTK 321
G+ V AVD+G MA SL +TG+++H +DGF ++P K + I WLVCDMVE+P+R+ ++
Sbjct: 232 GMMVTAVDNGTMAQSLMDTGQVKHLRDDGFVWRPSK-KNIYWLVCDMVEKPARVVHMIAD 290
Query: 322 WLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVY 381
W C +FNLKLPMKKRYA+ ++++ L + + +QAK LYHDREEITV+
Sbjct: 291 WFRENDCQEAMFNLKLPMKKRYAEAVHNIEVLRGLLKEVDNAFVIQAKQLYHDREEITVH 350
Query: 382 L 382
+
Sbjct: 351 V 351
>gi|109898517|ref|YP_661772.1| hypothetical protein Patl_2200 [Pseudoalteromonas atlantica T6c]
gi|109700798|gb|ABG40718.1| conserved hypothetical protein [Pseudoalteromonas atlantica T6c]
Length = 356
Score = 365 bits (937), Expect = 3e-99, Method: Composition-based stats.
Identities = 183/363 (50%), Positives = 245/363 (67%), Gaps = 11/363 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M LALYCR GFE++LA E+ +K AE V+G+ + NSG V+F+CYQ DAD LA+ LP
Sbjct: 1 MAGLALYCRTGFEKDLANEVVEKCAELNVYGYPELKTNSGLVLFQCYQAEDADKLAKTLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
LIFARQ+ S+ L DRI PI++ I EL VE AD+ + +E
Sbjct: 61 LTTLIFARQLFAFSERCEQLDTSDRIGPILN------GCIEFPECGELRVEHADSTQGRE 114
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTL-HLFFLRNNACYVGYSYNHNHSAHLM 202
+ FCRK +VPLRQAL+ + L P ++ L + H++F + VGYSY N+S++ +
Sbjct: 115 ISKFCRKISVPLRQALRGKRILT--PLERSNLPVCHVYFEDSTTAIVGYSYPANNSSYPL 172
Query: 203 GIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRG 262
GI RLKFP EAPSRSTLKL+EA FI + ++ + L+ ++AVDLGACPGGWTYQLVKRG
Sbjct: 173 GILRLKFPNEAPSRSTLKLDEAFQLFIPKKEQAKRLSGGLHAVDLGACPGGWTYQLVKRG 232
Query: 263 LFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKW 322
+FV AVD+G M +L TG++ +C EDGFKFQ P++ + WLVCDM+EQP R+A+LM W
Sbjct: 233 MFVEAVDNGAMDEALMATGQVRYCPEDGFKFQ-PRKNNVYWLVCDMIEQPQRVAKLMATW 291
Query: 323 LLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQ-QGLKYRLQAKHLYHDREEITVY 381
+ C +FNLKLPMKKRY V++ LQ+I + Q + Y L+ KHLYHDREE+TV+
Sbjct: 292 IATKRCQETVFNLKLPMKKRYESVKEALQIIDQCIDQHRAGPYDLKVKHLYHDREEVTVH 351
Query: 382 LRL 384
+RL
Sbjct: 352 MRL 354
>gi|77360010|ref|YP_339585.1| RNA 2'-O-ribose methyltransferase, SAM-dependent domain
[Pseudoalteromonas haloplanktis TAC125]
gi|84029356|sp|Q3IKB2|MTFA_PSEHT Putative RNA 2'-O-ribose methyltransferase mtfA
gi|76874921|emb|CAI86142.1| RNA 2'-O-ribose methyltransferase, SAM-dependent domain
[Pseudoalteromonas haloplanktis TAC125]
Length = 361
Score = 364 bits (935), Expect = 4e-99, Method: Composition-based stats.
Identities = 175/361 (48%), Positives = 244/361 (67%), Gaps = 9/361 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M+ + +YCR GFE + AAEIT AAE+G G+ + N+GYVI+EC+ D + +++
Sbjct: 1 MSSVVIYCRSGFENDAAAEITFHAAEQGFAGYVKAKPNTGYVIYECFDAQHGDEIIKKVD 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F+ ++FARQ L+ ++P +DR+ +V + A L SEL VET DTNE KE
Sbjct: 61 FKNMVFARQWFA-GTLIENMPVEDRVGAVV----EAAKDFTL--CSELRVETPDTNEGKE 113
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
LL FC+K + PL++AL+K+ + +P + +H+ FL NN YVGYSY+ N+S MG
Sbjct: 114 LLTFCKKISTPLKKALEKRNIVLREPKANRPV-MHVLFLTNNTAYVGYSYSFNNSPFFMG 172
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RL+ P++APSRSTLKL+EA FI Q + M +VDLGACPGGWTYQLV+RG+
Sbjct: 173 ILRLRMPSDAPSRSTLKLDEAFNVFIPEQQRESRVAAGMRSVDLGACPGGWTYQLVRRGM 232
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
FV A+D+G M L +TG+++H DGFK++P K R I WLVCDMVE+P+++ LM W
Sbjct: 233 FVSAIDNGPMNDDLMQTGQVKHFRADGFKYRPEK-RNITWLVCDMVEKPTKVTSLMIDWA 291
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+N + +IFNLKLPMKKR+ V +CL +I +L + G+ Y LQAKHLYHDREE+TV+L
Sbjct: 292 VNAYAKELIFNLKLPMKKRFDSVYECLSMIRAELEKYGISYELQAKHLYHDREEVTVHLN 351
Query: 384 L 384
+
Sbjct: 352 V 352
>gi|28395573|gb|AAO39137.1| SAM-dependent methyltransferase-like protein [Photorhabdus
luminescens]
Length = 308
Score = 350 bits (897), Expect = 1e-94, Method: Composition-based stats.
Identities = 169/302 (55%), Positives = 222/302 (73%), Gaps = 7/302 (2%)
Query: 82 LPFQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEA 141
+PF++LIFARQMLVV +LL DLP +DRI+PI+ + ++ + EL VE DTNE+
Sbjct: 1 IPFRELIFARQMLVVGELLRDLPPEDRISPIIGMLHGV-----IERAGELRVEVPDTNES 55
Query: 142 KELLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHL 201
KELL FCRKFTVPLR A++++ L + N + +H+FF+ CYVGYSY++N+S
Sbjct: 56 KELLKFCRKFTVPLRSAMRQEKILLIRENVNRPV-IHVFFIAPGCCYVGYSYSNNNSPFY 114
Query: 202 MGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKR 261
MGI RLKFP++APSRSTLKLEEA FI + E L +YAVDLGACPGGWTYQLVKR
Sbjct: 115 MGIPRLKFPSDAPSRSTLKLEEAFHVFIPYDEWEERLASGLYAVDLGACPGGWTYQLVKR 174
Query: 262 GLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTK 321
+ V+AVD+G M+ SL +TG+++H DGFKF+ P + I WLVCDMVE+P+++ +LM
Sbjct: 175 SMMVHAVDNGPMSESLMDTGQVKHHKVDGFKFE-PSTKNIYWLVCDMVEKPAKVTQLMAD 233
Query: 322 WLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVY 381
WL+NGWC IFNLKLPMKKRY +V LQ + +L + G+ ++QAKHLYHDREEITV+
Sbjct: 234 WLVNGWCREAIFNLKLPMKKRYEEVAHNLQKMNLQLKEGGVNAQIQAKHLYHDREEITVH 293
Query: 382 LR 383
+R
Sbjct: 294 VR 295
>gi|56459970|ref|YP_155251.1| SAM-dependent methyltransferase [Idiomarina loihiensis L2TR]
gi|81362578|sp|Q5QW15|MTFA_IDILO Putative RNA 2'-O-ribose methyltransferase mtfA
gi|56178980|gb|AAV81702.1| SAM-dependent methyltransferase [Idiomarina loihiensis L2TR]
Length = 369
Score = 348 bits (893), Expect = 3e-94, Method: Composition-based stats.
Identities = 182/367 (49%), Positives = 247/367 (67%), Gaps = 6/367 (1%)
Query: 20 INKKMNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLA 79
+N + + + L CR GFE + AAEI DK AE GV+G+ + YV + C Q +A+ +A
Sbjct: 5 VNGRGSGIVLLCRAGFEGDCAAEIQDKTAELGVYGYCQTQPEQAYVTYHC-QHEEAEHIA 63
Query: 80 RELPFQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTN 139
R+L + L+FAR+M + + +DR + ++ + +T L + EL V T DTN
Sbjct: 64 RKLTLKDLVFAREMFALLGPVKVAGIEDRASEVIKVLKPHQETFGL--AGELRVGTPDTN 121
Query: 140 EAKELLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSA 199
EA +L FCRKF+VPLRQAL+K+ L+ KP K + LH+ F+ VGYSY++N +
Sbjct: 122 EANQLSKFCRKFSVPLRQALRKEELLSNKPLAKRPM-LHVLFVNPAHALVGYSYSYNQTL 180
Query: 200 HLMGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLV 259
H GI RL+ EAPSRSTLKL+EA F+ ++ + ++ M AVDLGA PGGWTYQLV
Sbjct: 181 HNGGIVRLRMSKEAPSRSTLKLDEAFQVFVPENEHEKRVHSGMKAVDLGAAPGGWTYQLV 240
Query: 260 KRGLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELM 319
+RG+ V AVD+G MA SL ETG+++H EDGFKF+ PKR+ + WLVCDMVE+P+R+ ELM
Sbjct: 241 RRGMMVQAVDNGPMAESLMETGQVKHIQEDGFKFR-PKRKNVTWLVCDMVEKPARVGELM 299
Query: 320 TKWLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLK-YRLQAKHLYHDREEI 378
T WLL G C IFNLKLPM++RYA V+ L I ++L +G K + +QAKHLYHDREEI
Sbjct: 300 TSWLLEGDCEEAIFNLKLPMRQRYAAVKGYLDQIKEQLQTEGTKPFEIQAKHLYHDREEI 359
Query: 379 TVYLRLL 385
TV+LR L
Sbjct: 360 TVHLRWL 366
>gi|85712013|ref|ZP_01043067.1| SAM-dependent methyltransferase [Idiomarina baltica OS145]
gi|85694199|gb|EAQ32143.1| SAM-dependent methyltransferase [Idiomarina baltica OS145]
Length = 358
Score = 344 bits (883), Expect = 5e-93, Method: Composition-based stats.
Identities = 180/363 (49%), Positives = 240/363 (66%), Gaps = 6/363 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L L CR GFE + AAEI +KAA GV+G+ + + YV++ C Q +AD LA++LP
Sbjct: 1 MNGLVLLCRAGFEGDCAAEIQEKAAALGVYGYCQTQADQAYVVYHC-QAEEADHLAKKLP 59
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
++LIF R V+ +DR++ + + + L + L VET D+NEA
Sbjct: 60 LKELIFTRTFFVLLASAQLAGIEDRVSVVKEALEPHKEWFGLAGA--LRVETPDSNEANA 117
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
+ FCRKF VPLRQ L+ L+ KP K LH+FF+ +GYSY+ N S + G
Sbjct: 118 IAKFCRKFAVPLRQGLRAVDLLSKKPLAKRPF-LHVFFVNKAYALLGYSYSFNQSPYEEG 176
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RL+ P+ PSRSTLKL+EA F+ + + + M AVDLGA PGGWTYQLV+RG+
Sbjct: 177 ILRLRMPSNGPSRSTLKLDEAFHVFVPEEEREQRIQAGMRAVDLGAAPGGWTYQLVRRGM 236
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V AVD+G MA SL ETG++EH EDGFK++ PKRR + WLVCDMVE+P+R+ ELMT WL
Sbjct: 237 MVQAVDNGPMADSLMETGQVEHIREDGFKYR-PKRRNVTWLVCDMVEKPARVGELMTAWL 295
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLK-YRLQAKHLYHDREEITVYL 382
L +C IFNLKLPM++RYA V+Q L+ I ++L +QG + + +QAKHLYHDREEITV+L
Sbjct: 296 LEEYCKEAIFNLKLPMRQRYASVKQYLEQITEQLQEQGERSFEIQAKHLYHDREEITVHL 355
Query: 383 RLL 385
R L
Sbjct: 356 RWL 358
>gi|152995954|ref|YP_001340789.1| hypothetical protein Mmwyl1_1930 [Marinomonas sp. MWYL1]
gi|150836878|gb|ABR70854.1| conserved hypothetical protein [Marinomonas sp. MWYL1]
Length = 350
Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats.
Identities = 169/357 (47%), Positives = 233/357 (65%), Gaps = 12/357 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M + +YCR GFE++ AAE+++ A+ KG +G+A++ ++GY+++ Q + L ++L
Sbjct: 1 MKNVLVYCRQGFEKDCAAELSEVASSKGFYGYAKVVPDAGYIVYNFDQADAGETLIQQLN 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIFARQ++ V+D++ +L Q R+ ++ ++ L + E+W+ETADTN+AK
Sbjct: 61 FNRLIFARQIIAVNDVI-ELEQGGRVESLLEAARE------LPLAEEIWIETADTNDAKA 113
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L G +K PLR+ K+ G L N+ G+ H+F L A Y+G SY S MG
Sbjct: 114 LSGLIKKLEKPLREGWKRSGVLR---NKAVGVRHHVFMLDGEAAYLGVSYAACRSEFPMG 170
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I+RL+FPA PSRSTLKLEEA L F+ L E M AVDLGA PGGWTYQ VK+G+
Sbjct: 171 IRRLRFPAAGPSRSTLKLEEAFLQFVPEQTLEADLTEGMTAVDLGAAPGGWTYQFVKKGI 230
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V A+D+G M L TG +EH DGFK++PP +DWLVCDMVE+P ++AELM KWL
Sbjct: 231 NVIAIDNGPMQKELMSTGLVEHEKADGFKYEPP--YTVDWLVCDMVERPIKVAELMAKWL 288
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
+GW IFNLKLPMKKRY +V CLQ + L + G+ Y+ Q KHLYHDREE+TV
Sbjct: 289 ASGWTRRAIFNLKLPMKKRYQEVTLCLQTMEGLLRKAGVSYQYQVKHLYHDREEVTV 345
>gi|71280266|ref|YP_270215.1| hypothetical protein CPS_3541 [Colwellia psychrerythraea 34H]
gi|84029352|sp|Q47YA5|MTFA_COLP3 Putative RNA 2'-O-ribose methyltransferase mtfA
gi|71146006|gb|AAZ26479.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
Length = 368
Score = 340 bits (873), Expect = 6e-92, Method: Composition-based stats.
Identities = 180/369 (48%), Positives = 233/369 (63%), Gaps = 17/369 (4%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M + L+CR GFE+E AEI +KAA ++G+ + N G V F ++ + L +LP
Sbjct: 1 MTSIVLFCRPGFEKECGAEIQEKAAWNEMYGYLELKINQGLVFFHLHESAHGEALMNKLP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNS---SELWVETADTNE 140
++LIFARQ V DLP +R+ I T AL N S+L +E AD N+
Sbjct: 61 LKRLIFARQWFVTVTDKIDLPDYNRVEAI---------TEALGNDWQYSDLRMEMADDND 111
Query: 141 AKELLGFCRKFTVPLRQALKKQGWLNAKPNQKC----GLTLHLFFLRNNACYVGYSYNHN 196
K L FCRK +VPLRQAL+K L K N G LH FL +G+S N
Sbjct: 112 GKSLSKFCRKLSVPLRQALRKNKVLTQKGNNSADDPEGAILHALFLSGQEVILGFSLARN 171
Query: 197 HSAHLMGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTY 256
S H+MGI RLKFP+ +PSRSTLKL+EA L FI R + E L M AVDLG+ PGGWTY
Sbjct: 172 SSPHVMGIPRLKFPSASPSRSTLKLDEAFLHFIPRDEWDERLTSGMNAVDLGSAPGGWTY 231
Query: 257 QLVKRGLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIA 316
QLV+RG+ V A+D+G MA SL ETG+++H DGFK+ P K + + WLVCDM+E+P R+A
Sbjct: 232 QLVRRGMMVTAIDNGLMAESLMETGQVKHKMMDGFKYVPLK-QNVYWLVCDMIEKPQRVA 290
Query: 317 ELMTKWLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDRE 376
+LM++WLL+G C +FNLKLPMK RY QV LQ I D ++ +KY L AKHLY+DRE
Sbjct: 291 KLMSEWLLHGHCKEAMFNLKLPMKGRYQQVTNDLQTIKDAFTKHNVKYELYAKHLYYDRE 350
Query: 377 EITVYLRLL 385
E+TV+ RLL
Sbjct: 351 EVTVHARLL 359
>gi|92114530|ref|YP_574458.1| conserved hypothetical HI1195 [Chromohalobacter salexigens DSM
3043]
gi|91797620|gb|ABE59759.1| conserved hypothetical HI1195 [Chromohalobacter salexigens DSM
3043]
Length = 357
Score = 335 bits (858), Expect = 4e-90, Method: Composition-based stats.
Identities = 170/359 (47%), Positives = 231/359 (64%), Gaps = 14/359 (3%)
Query: 29 LYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPFQQLI 88
LYCR GFE++L+AE+ DK A G G+ A +SG+V F A+ + R LP + L+
Sbjct: 10 LYCRPGFEKDLSAELADKTAHAGQGGYPIAARDSGHVRFVLDPETPANEVHRALPLEALV 69
Query: 89 FARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSS--ELWVETADTNEAKELLG 146
FARQ LV L LP+ DR++ IV D + S +W ET DTNE K L G
Sbjct: 70 FARQSLVAFPPLEALPRDDRLSAIV-------DLVVASGWSFESIWQETPDTNEEKALAG 122
Query: 147 FCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGIQR 206
+ PL LKK+G L K G LHLF+ + + S+ N + HL GI R
Sbjct: 123 LMKALRKPLESTLKKRGALRRKAG---GRRLHLFWTAGDRVQLAMSFPGNRAEHLGGIPR 179
Query: 207 LKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVY 266
LKFP EAPSRSTLKLEEA F+ R P L+++M A DLGA PGGWTYQLV++G++VY
Sbjct: 180 LKFPREAPSRSTLKLEEAWHVFVPREAWPTRLSDSMQAADLGAAPGGWTYQLVRKGMYVY 239
Query: 267 AVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNG 326
A+D+G M +L +G++EH EDGF +QPP R +DWLVCD+V++P R+ +++ +WL+
Sbjct: 240 AIDNGPMDDALMASGQVEHLCEDGFVWQPPMR--LDWLVCDIVDKPMRVIDMVERWLVAP 297
Query: 327 WCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRLL 385
WCH IFNLKLPMKKR+ +V +CL+ +A L Q G++ R++ +HLYHDREE+TV++ LL
Sbjct: 298 WCHEAIFNLKLPMKKRWDEVSRCLERLASSLDQAGIRARIRCRHLYHDREEVTVHVCLL 356
>gi|87120481|ref|ZP_01076375.1| hypothetical protein MED121_22027 [Marinomonas sp. MED121]
gi|86164124|gb|EAQ65395.1| hypothetical protein MED121_22027 [Marinomonas sp. MED121]
Length = 350
Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats.
Identities = 173/357 (48%), Positives = 224/357 (62%), Gaps = 12/357 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M + LYCR GFE++ A EIT+ AA G +G+ RM G+V+F Q ++ L +
Sbjct: 1 MKNVLLYCRPGFEKDCAGEITELAALHGFYGYVRMQPKQGFVVFVMEQADASESLIDAIE 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIFARQ++ V+D ++ + R+ ++ ++ L + +LW+ETADTNE K
Sbjct: 61 FTDLIFARQIIAVNDEIS-MGSGGRVEALLDAAKK------LPLAQDLWIETADTNEGKG 113
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L G +K PLR KK L K G+ HLF + Y+G S S +G
Sbjct: 114 LAGLIKKLEKPLRVGWKKASLLRTK---AAGIRHHLFLVSGELAYLGVSNIKCRSEFPLG 170
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I+RL+FPA APSRSTLKLEEA+ F+ + P LL E M AVDLGA PGGWTYQLV+RG+
Sbjct: 171 IRRLRFPANAPSRSTLKLEEAMHEFVPAKKWPVLLREGMTAVDLGAAPGGWTYQLVERGM 230
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V A+D+G M L TG ++H DGFKFQPP R++DWLVCDMVE+P + ELM KWL
Sbjct: 231 RVTAIDNGPMGELLMATGLVDHQKADGFKFQPP--RQVDWLVCDMVEKPQMVTELMAKWL 288
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
GW IFNLKLPMKKRY +V CL L+ +L + G +Y +QAKHLYHDREEITV
Sbjct: 289 SQGWTRRSIFNLKLPMKKRYQEVSTCLTLLKAELDKAGRQYEIQAKHLYHDREEITV 345
>gi|114773551|ref|ZP_01450649.1| predicted SAM-dependent methyltransferase [alpha proteobacterium
HTCC2255]
Length = 378
Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats.
Identities = 167/366 (45%), Positives = 231/366 (63%), Gaps = 9/366 (2%)
Query: 19 KINKKMNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLL 78
+ N + L YCR G+E +A EI A +FGFA++ ++G+V F Y P + +
Sbjct: 12 EFNLSLCGLLCYCRSGYEANMAQEIEAICALHQIFGFAKVLPHTGFVYFAFYSPENIQRV 71
Query: 79 ARELPFQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKN--SSELWVETA 136
+ F +L+FARQM+ V + +L + DR+T Q + DT K + VE+A
Sbjct: 72 NEAVRFDELMFARQMIGVFAHIPNLNRNDRLT----QIHEACDTHLSKEFMAQTAVVESA 127
Query: 137 DTNEAKELLGFCRKFTVPLRQALKKQGWLNAKPNQKC--GLTLHLFFLRNNACYVGYSYN 194
DT + KEL FCRKF+VP RQ L+ WL + ++ G+TLH FF + ++G S
Sbjct: 128 DTEDGKELAKFCRKFSVPFRQHLRSHQWLVQRKTKQALVGMTLHAFFEHGSCIHLGVSLP 187
Query: 195 HNHSAHLMGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGW 254
N S H GI RLKFP++APSRSTLKLEEAI TFI + ++ N + AVDLGACPGGW
Sbjct: 188 GNRSVHENGIYRLKFPSDAPSRSTLKLEEAIQTFIPKAEQQHYFNGDVSAVDLGACPGGW 247
Query: 255 TYQLVKRGLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSR 314
TYQLV RG+ V A+D+G M L TG +++ A DGFK+Q P+ K++WLVCDM+EQP R
Sbjct: 248 TYQLVSRGVQVEAIDNGAMDDKLMATGLVDYFAADGFKYQ-PQYGKVNWLVCDMIEQPDR 306
Query: 315 IAELMTKWLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHD 374
+A+LMT+WL+ GW IFNLKLPMK+R+ + + I +L G+ + QAKHLYH+
Sbjct: 307 VAQLMTQWLVKGWAQHAIFNLKLPMKQRFVAMNEAKTNIISQLKAAGINFSWQAKHLYHN 366
Query: 375 REEITV 380
R+E+TV
Sbjct: 367 RDEVTV 372
>gi|89093178|ref|ZP_01166128.1| hypothetical protein MED92_03837 [Oceanospirillum sp. MED92]
gi|89082474|gb|EAR61696.1| hypothetical protein MED92_03837 [Oceanospirillum sp. MED92]
Length = 355
Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats.
Identities = 165/361 (45%), Positives = 222/361 (61%), Gaps = 10/361 (2%)
Query: 25 NKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPF 84
N+L L CR GFE+E AAEITD+ A G++G+ + E GY+IF Q GDA+ R++ F
Sbjct: 5 NRLLLQCRSGFEKEAAAEITDQCANVGIYGYCTLNEGEGYLIFNVQQSGDAERAIRDISF 64
Query: 85 QQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKEL 144
+LIF RQ LV D T + ++DRI+ I Q I E+W E DT + +E+
Sbjct: 65 SELIFIRQWLVCGDCQT-VAKEDRISDI----QNILGD--FPPCEEVWTEYPDTTDGREM 117
Query: 145 LGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGI 204
F RKF L Q LK+ +L KP ++ G L LF L YVGY+ N + +G+
Sbjct: 118 ATFSRKFASALSQKLKQSAFLPKKP-RRSGNRLMLFVLSGCQMYVGYTQQKNSAPWPLGV 176
Query: 205 QRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLF 264
RLKFP APSRSTLKLEEA FI + + L AVDLGA PGGWT+QLVKR +F
Sbjct: 177 PRLKFPKSAPSRSTLKLEEAWHWFIPKDEWDTRLAHGSTAVDLGAAPGGWTWQLVKRSMF 236
Query: 265 VYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLL 324
V AVD+G M L +G++ H ED ++F P ++ +VCD+V++P + A + W++
Sbjct: 237 VTAVDNGPMNEDLMASGQVTHATEDAYRFVPDA--PVNLMVCDVVDKPVKTANMAADWVI 294
Query: 325 NGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRL 384
GWC IFNLKLPMK+RY +V C +IA++ Q+G+ Y L AK LYHDREEIT +LRL
Sbjct: 295 QGWCQEAIFNLKLPMKQRYQEVVACTNVIAERFMQEGIAYELSAKQLYHDREEITCHLRL 354
Query: 385 L 385
+
Sbjct: 355 I 355
>gi|53802683|ref|YP_112631.1| hypothetical protein MCA0092 [Methylococcus capsulatus str. Bath]
gi|81683223|sp|Q60CL4|MTFA_METCA Putative RNA 2'-O-ribose methyltransferase mtfA
gi|53756444|gb|AAU90735.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 352
Score = 317 bits (812), Expect = 9e-85, Method: Composition-based stats.
Identities = 172/364 (47%), Positives = 224/364 (61%), Gaps = 20/364 (5%)
Query: 25 NKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPF 84
+ + LYCR GFE+E AAEI + G+ G R ENS YV+F ++P A L F
Sbjct: 5 SSILLYCRRGFEKECAAEILVQTQAAGISGHVRAKENSAYVVFVAHEPEILANRAARLRF 64
Query: 85 QQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIA--LKNSSELWVETADTNEAK 142
LIFARQ + S L DLP DRITP++ DT A + S LW+ETADTNEAK
Sbjct: 65 DALIFARQRIFASGPLADLPVDDRITPLL-------DTAAGLQRRYSTLWLETADTNEAK 117
Query: 143 ELLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLM 202
EL F RKF P A + + LH+FFL + A Y+GY+ + +
Sbjct: 118 ELAAFTRKFERPFAAAAAGLLGGGPQAPR-----LHVFFLTSTAAYLGYTLPDDSAPWPC 172
Query: 203 GIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPE-LLNETMYAVDLGACPGGWTYQLVKR 261
GI RLK P APSRSTLKLEEA L F+ R PE +L M AVDLGA PGGWT+QLV+R
Sbjct: 173 GIPRLKLPRSAPSRSTLKLEEAFLVFVDR---PETMLRPGMSAVDLGAAPGGWTWQLVRR 229
Query: 262 GLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTK 321
+ AVD+G + +L ++G + H DGF+F+P R +DWLVCDMVEQPSRIA L+
Sbjct: 230 HIRTTAVDNGNLDPALLDSGLVTHLRTDGFRFRP--SRPVDWLVCDMVEQPSRIARLVAD 287
Query: 322 WLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVY 381
W +G +FNLKLPM +RY +V++C LI ++L+ QG+ +RL+ + LYHDREE+T +
Sbjct: 288 WAADGAFRYAVFNLKLPMNRRYEEVERCRGLIEERLAAQGVSHRLRFRQLYHDREEVTGF 347
Query: 382 LRLL 385
L L+
Sbjct: 348 LELV 351
>gi|88796070|ref|ZP_01111754.1| hypothetical protein MADE_18129 [Alteromonas macleodii 'Deep
ecotype']
gi|88772587|gb|EAR03868.1| hypothetical protein MADE_18129 [Alteromonas macleodii 'Deep
ecotype']
Length = 366
Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats.
Identities = 151/351 (43%), Positives = 220/351 (62%), Gaps = 4/351 (1%)
Query: 30 YCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPFQQLIF 89
YCR G+E + A E+T + E G +G+ +NSG+ + Y + + IF
Sbjct: 10 YCRPGYENDTANELTSRYGEAGFYGYPVSKKNSGFAHYHLYDAAQLEQTVTQFAVHDSIF 69
Query: 90 ARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKELLGFCR 149
RQ++ V + D+ ++DR+ ++ +++ ++ + + VE DT E K L FCR
Sbjct: 70 PRQLVAVFAAINDVEKEDRVGQVLDALKEVEKPFSIFGAVD--VEYPDTEEGKTLAKFCR 127
Query: 150 KFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGIQRLKF 209
KFTVPLRQAL+K GWL AK N LH+FF CY+G++ + S +GI RLKF
Sbjct: 128 KFTVPLRQALRKAGWLTAKENLG-KPKLHIFFASFEICYIGFTLPSHASRDHLGICRLKF 186
Query: 210 PAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVD 269
P+++PSRSTLKLE+A++ +S Q+ ++L AVDLGACPGGWTYQLVKRG++V A+D
Sbjct: 187 PSDSPSRSTLKLEDALVNMLSNKQQSKVLRSGGRAVDLGACPGGWTYQLVKRGMYVEAID 246
Query: 270 HGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWCH 329
+G +A SL TG +EH A DGF ++P R +D LVCDM+EQP R+A+LM WL+ W
Sbjct: 247 NGLIADSLMSTGLVEHHAADGFTYRPQFGR-VDLLVCDMIEQPDRVAKLMGDWLVKHWAT 305
Query: 330 SMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
IFN+KLPMK+RY V + + + +L + ++ +HLYHDR+E+TV
Sbjct: 306 HAIFNIKLPMKRRYETVVEAMTSLNSRLDALDDAFAVKVRHLYHDRDEVTV 356
>gi|26988837|ref|NP_744262.1| hypothetical protein PP_2113 [Pseudomonas putida KT2440]
gi|81441388|sp|Q88L23|MTFA_PSEPK Putative RNA 2'-O-ribose methyltransferase mtfA
gi|24983641|gb|AAN67726.1|AE016404_1 conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 354
Score = 311 bits (796), Expect = 6e-83, Method: Composition-based stats.
Identities = 168/362 (46%), Positives = 223/362 (61%), Gaps = 13/362 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L ++CR GFE E+ AEI++ AA GV G+A+ S F C + G A+ L EL
Sbjct: 1 MNTLFMHCRPGFEGEVCAEISEHAARLGVAGYAKGKPQSASAEFVCSEEGGAERLMGELR 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F QLIF RQ +LP++DRI+ ++ Q+AD LW+E D+NE KE
Sbjct: 61 FNQLIFPRQW--ARGGYVELPERDRISVLL---AQLADFPVF---GSLWLEVLDSNEGKE 112
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKF VPLR+AL+K G L P + L L F+ +VG + N + MG
Sbjct: 113 LSTFCRKFEVPLRKALEKAGRLVDDPGRP---RLLLTFISGRRVFVGVASASNSALWPMG 169
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP EAPSRSTLKLEEA FI R Q + L + M VDLGA PGGWTYQLV+RG+
Sbjct: 170 IPRLKFPREAPSRSTLKLEEAWHQFIPREQWEQRLGDDMTGVDLGASPGGWTYQLVRRGM 229
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V A+D+G MA SL +TG ++H DGF +QP ++ +DW+VCD+VE+P+R L+ WL
Sbjct: 230 LVTAIDNGPMAESLMDTGLVQHLMADGFTWQP--KQPVDWMVCDIVEKPARTTSLIETWL 287
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
G C + NLKLPMK+RYA+V++ L + + ++ + K LYHDREE+T +LR
Sbjct: 288 GEGLCREAVVNLKLPMKQRYAEVRRLLDRMEATFKARKIRVSIACKQLYHDREEVTCHLR 347
Query: 384 LL 385
L
Sbjct: 348 RL 349
>gi|145637051|ref|ZP_01792714.1| predicted methyltransferase [Haemophilus influenzae PittHH]
gi|145269705|gb|EDK09645.1| predicted methyltransferase [Haemophilus influenzae PittHH]
Length = 185
Score = 311 bits (796), Expect = 6e-83, Method: Composition-based stats.
Identities = 143/183 (78%), Positives = 160/183 (87%)
Query: 202 MGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKR 261
MGI RLKFPA+APSRSTLKLEEAILTFI R +E + LNE M VDLGACPGGWTYQLVKR
Sbjct: 1 MGIPRLKFPADAPSRSTLKLEEAILTFIPRKEENKRLNENMIGVDLGACPGGWTYQLVKR 60
Query: 262 GLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTK 321
GLFVYAVDHGKMAASLH+TGRIEHCAEDGFKFQPPKR+K+DWLVCDMVEQPSRI+ L+ K
Sbjct: 61 GLFVYAVDHGKMAASLHDTGRIEHCAEDGFKFQPPKRKKVDWLVCDMVEQPSRISSLIGK 120
Query: 322 WLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVY 381
WLLNGWC IFNLKLPMKKRY +V CL+ +A L++Q L + +QAKHLYHDREEITV+
Sbjct: 121 WLLNGWCRETIFNLKLPMKKRYQEVILCLENLAVMLAEQNLNFEIQAKHLYHDREEITVH 180
Query: 382 LRL 384
+ L
Sbjct: 181 IAL 183
>gi|148548832|ref|YP_001268934.1| SAM-dependent methyltransferase-like protein [Pseudomonas putida
F1]
gi|148512890|gb|ABQ79750.1| SAM-dependent methyltransferase-like protein [Pseudomonas putida
F1]
Length = 354
Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats.
Identities = 166/362 (45%), Positives = 219/362 (60%), Gaps = 13/362 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L ++CR GFE E+ AEI++ AA GV G+A+ S F C + G A+ L EL
Sbjct: 1 MNTLFMHCRPGFEGEVCAEISEHAARLGVAGYAKGKPQSASAEFVCSEEGGAERLMGELR 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F QLIF RQ +LP+ DRI+ + +A + LW+E D+NE KE
Sbjct: 61 FNQLIFPRQW--ARGGYVELPESDRISVL------LAQLVDFPVFGSLWLEVLDSNEGKE 112
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKF VPLR+AL+K G L P + L L F+ +VG + N + MG
Sbjct: 113 LSTFCRKFEVPLRKALEKAGRLVDDPGRP---RLLLTFISGRRVFVGVASASNSALWPMG 169
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP EAPSRSTLKLEEA FI R Q + L + M VDLGA PGGWTYQLV+RG+
Sbjct: 170 IPRLKFPREAPSRSTLKLEEAWHQFIPREQWEQRLGDDMTGVDLGASPGGWTYQLVRRGM 229
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V A+D+G MA SL +TG ++H DGF +QP + +DW+VCD+VE+P+R L+ WL
Sbjct: 230 LVTAIDNGPMAESLMDTGLVQHLMADGFTWQP--KHPVDWMVCDIVEKPARTTSLIETWL 287
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
G C + NLKLPMK+RYA+V++ L + + ++ + K LYHDREE+T +LR
Sbjct: 288 GEGLCREAVVNLKLPMKQRYAEVRRLLDRMEATFKARKIRVSIACKQLYHDREEVTCHLR 347
Query: 384 LL 385
L
Sbjct: 348 RL 349
>gi|126356693|ref|ZP_01713697.1| conserved hypothetical protein [Pseudomonas putida GB-1]
gi|126318502|gb|EAZ69356.1| conserved hypothetical protein [Pseudomonas putida GB-1]
Length = 354
Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats.
Identities = 167/362 (46%), Positives = 223/362 (61%), Gaps = 13/362 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L ++CR GFE E+ AEI++ AA GV G+A+ S F C + G A+ L EL
Sbjct: 1 MNTLFMHCRPGFEGEVCAEISEHAARLGVSGYAKSKPQSASAEFVCSEEGGAERLMGELR 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F QLIF RQ +LP+ DRI+ ++ Q+AD LW+E D+NE KE
Sbjct: 61 FNQLIFPRQW--ARGGFVELPETDRISVLL---SQLADFPVF---GSLWLEVLDSNEGKE 112
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKF VPLR+AL+K G L ++ L L F+ +VG + +N + MG
Sbjct: 113 LSTFCRKFEVPLRKALEKAGRLVDDASRP---RLLLSFISGRRVFVGVAPANNSALWPMG 169
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP EAPSRSTLKLEEA FI R Q + L + M VDLGA PGGWTYQLV+RG+
Sbjct: 170 IPRLKFPREAPSRSTLKLEEAWHQFIPREQWEQRLGDDMTGVDLGASPGGWTYQLVRRGM 229
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V A+D+G MA SL +TG ++H DGF +QP ++ +DW+VCD+VE+P+R L+ WL
Sbjct: 230 LVTAIDNGPMAESLMDTGLVQHLMADGFTWQP--KQPVDWMVCDIVEKPARTTSLIETWL 287
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
G C + NLKLPMK+RYA+V++ L + + ++ + K LYHDREE+T +LR
Sbjct: 288 GEGLCREAVVNLKLPMKQRYAEVRRLLDRMEATFKARKIRVSIACKQLYHDREEVTCHLR 347
Query: 384 LL 385
L
Sbjct: 348 RL 349
>gi|67157258|ref|ZP_00418560.1| conserved hypothetical protein [Azotobacter vinelandii AvOP]
gi|67085525|gb|EAM04998.1| conserved hypothetical protein [Azotobacter vinelandii AvOP]
Length = 356
Score = 308 bits (788), Expect = 5e-82, Method: Composition-based stats.
Identities = 170/359 (47%), Positives = 216/359 (60%), Gaps = 13/359 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L L+CR GFE E+ AEI + A V G+AR NS + F C +PG A+ L REL
Sbjct: 4 MNSLLLHCRPGFEGEVCAEIGEHAGRLNVAGYARAKPNSAHAEFVCSEPGGAERLMRELR 63
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F L+F RQ +LP+ +RI ++ A LW+E D+NE KE
Sbjct: 64 FAGLVFPRQW--ARGAFVELPESERIGVLLEHLA------AYPVCGSLWLEVLDSNEGKE 115
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKF VPLR+AL K G L P + L L F ++G + N +A MG
Sbjct: 116 LSTFCRKFEVPLRKALGKTGRLLDDPRRP---RLLLTFRSGREVFLGLAEPDNSAAWPMG 172
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP EAPSRSTLKLEEA FI R L M AVDLGA PGGWT+QLV R +
Sbjct: 173 IPRLKFPREAPSRSTLKLEEAWHQFIPREAWDLRLAPGMSAVDLGAAPGGWTWQLVNRHM 232
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V AVD+G MA SL ++G +EH DGF F+P RR +DW+VCD+VE+P+R A L+ WL
Sbjct: 233 KVTAVDNGPMAQSLMDSGLVEHVRADGFVFRP--RRPVDWMVCDIVEKPARTAALIETWL 290
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYL 382
G C + NLKLPMK+R+A+V++ L+ I D LS +G K + + LYHDREE+T +L
Sbjct: 291 GEGLCREAVVNLKLPMKQRHAEVRRLLERIRDGLSARGAKVSVACRQLYHDREEVTCHL 349
>gi|146282210|ref|YP_001172363.1| predicted SAM-dependent methyltransferase [Pseudomonas stutzeri
A1501]
gi|145570415|gb|ABP79521.1| predicted SAM-dependent methyltransferase [Pseudomonas stutzeri
A1501]
Length = 374
Score = 307 bits (787), Expect = 7e-82, Method: Composition-based stats.
Identities = 173/365 (47%), Positives = 226/365 (61%), Gaps = 13/365 (3%)
Query: 21 NKKMNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLAR 80
+ MN L L+CR GFE E+ AEI++ AA V G+A+ +S F C +PG A+ L R
Sbjct: 23 DPNMNTLLLHCRPGFEGEVCAEISEHAAILEVAGYAKARPDSACAEFICSEPGGAERLMR 82
Query: 81 ELPFQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNE 140
L F LIF RQ D L LP+ DRI+ ++ +AD S LW+E DTN+
Sbjct: 83 RLRFADLIFPRQW-ARGDYL-QLPETDRISVLL---AHLADYPV---CSSLWLEVLDTND 134
Query: 141 AKELLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAH 200
KEL FCRKF PLR+AL K G L+ Q G L L F +VG + +N +
Sbjct: 135 GKELSNFCRKFEAPLRKALVKAGRLD---EQGKGPRLLLTFKSGREVFVGIAEANNSALW 191
Query: 201 LMGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVK 260
MGI RLKFP +APSRSTLKLEEA FI R Q L M VDLGA PGGWT+Q+V
Sbjct: 192 PMGIPRLKFPRQAPSRSTLKLEEAWHHFIPREQWDTRLAAGMTGVDLGAAPGGWTWQMVN 251
Query: 261 RGLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMT 320
R + V AVD+G M A L ++G +EH DGF F+P +R +DW+VCD+VE+P+R A L+
Sbjct: 252 RHIKVSAVDNGPMNADLMDSGLVEHFRADGFTFRP--KRPVDWMVCDIVEKPARNAALLE 309
Query: 321 KWLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
W+ G C + NLKLPMK+RYA+V++ L+ IAD L+++G+K + K LYHDREE+T
Sbjct: 310 TWIGEGLCREAVVNLKLPMKQRYAEVKRLLERIADGLAERGVKASIGCKQLYHDREEVTC 369
Query: 381 YLRLL 385
+LR L
Sbjct: 370 HLRRL 374
>gi|119897300|ref|YP_932513.1| hypothetical protein azo1009 [Azoarcus sp. BH72]
gi|119669713|emb|CAL93626.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 364
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 163/359 (45%), Positives = 221/359 (61%), Gaps = 12/359 (3%)
Query: 27 LALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPFQQ 86
L YCR GFE+ELAAEI D AA+ G+ G+ R SGY FE ++P L +++
Sbjct: 15 LLAYCRAGFEKELAAEIDDLAADAGLIGYVRTEPGSGYAAFETFEPVPVIKLGEFADWRK 74
Query: 87 LIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKELLG 146
+FARQ+L D + DLP++DR P+V + + S + +ET DT+EAK+ G
Sbjct: 75 PVFARQLLPWFDRIDDLPERDRARPLVDMVKGSG-----QRFSGVVLETPDTDEAKQRSG 129
Query: 147 FCRKFTVPLRQALKKQGWLN-AKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGIQ 205
FCR+FT PL + L+K G L KP LH+ F + ++ + MGI
Sbjct: 130 FCRRFTEPLTRELEKVGALRLGKPGFP---VLHVMFPTATSAWLAAGLKDRCAPWPMGIP 186
Query: 206 RLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFV 265
RL+ P+ APSRSTLKL EAI+T +S + LL M AVDLGA PGGWT+QL +RG+ V
Sbjct: 187 RLRMPSNAPSRSTLKLAEAIMTLLSDEERDSLLRAGMRAVDLGAAPGGWTWQLAQRGIRV 246
Query: 266 YAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLN 325
A+D+G + ++ T +EH DGF ++P +R +DW+VCDMVEQPSRIA LM +W+
Sbjct: 247 TAIDNGPLRDTVMATEMVEHLKADGFTWRP--QRPVDWMVCDMVEQPSRIASLMAEWIAT 304
Query: 326 GWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRL 384
G C IFNLKLPMK+R V+QC +LI +L+ G + L+ K LYHDREE+T YL L
Sbjct: 305 GRCRHTIFNLKLPMKRRLEAVEQCRELIRKRLASIG-PFDLRIKQLYHDREEVTAYLTL 362
>gi|104782760|ref|YP_609258.1| hypothetical protein PSEEN3755 [Pseudomonas entomophila L48]
gi|95111747|emb|CAK16471.1| conserved hypothetical protein [Pseudomonas]
Length = 354
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 168/362 (46%), Positives = 222/362 (61%), Gaps = 13/362 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L ++CR GFE E+ AEI++ AA GV G+A+ S F C +P A L EL
Sbjct: 1 MNTLFMHCRPGFEGEVCAEISEHAALLGVAGYAKGKPQSACAEFVCTEPDGAQRLMHELR 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F QLIF RQ +LP+ DRI+ ++ + +AD L LW+E D+NE KE
Sbjct: 61 FAQLIFPRQW--ARGAFVELPETDRISVLL---EHLAD---LPVCGSLWLEVLDSNEGKE 112
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FCRKF VPLR+AL+K G L + L L F+ ++G + N + MG
Sbjct: 113 LSTFCRKFEVPLRKALEKAGRLVDDARRP---RLLLTFISGRRVFLGLAEADNSALWPMG 169
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP EAPSRSTLKLEEA FI R Q + LN+ M VDLGA PGGWTYQLVKRG+
Sbjct: 170 IPRLKFPREAPSRSTLKLEEAWHQFIPREQWEQRLNDDMTGVDLGASPGGWTYQLVKRGM 229
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V A+D+G MA SL +TG + H DGF ++P + +DW+VCD+VE+P+R A L+ WL
Sbjct: 230 LVTAIDNGPMAESLMDTGLVTHLMADGFTWKP--KHTVDWMVCDIVEKPARTASLIETWL 287
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
G C + NLKLPMK+R+A+V++ L + ++ +K + K LYHDREE+T +LR
Sbjct: 288 GEGLCREAVVNLKLPMKQRHAEVRKLLDRMEAGFKERKVKVSIACKQLYHDREEVTCHLR 347
Query: 384 LL 385
L
Sbjct: 348 RL 349
>gi|148979787|ref|ZP_01815694.1| predicted methyltransferase [Vibrionales bacterium SWAT-3]
gi|145961581|gb|EDK26881.1| predicted methyltransferase [Vibrionales bacterium SWAT-3]
Length = 261
Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats.
Identities = 145/256 (56%), Positives = 191/256 (74%), Gaps = 2/256 (0%)
Query: 130 ELWVETADTNEAKELLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYV 189
++ +ET DTNEAKELL FCRKFTVP+RQA++ +G + AK N K + LHL F+ C+V
Sbjct: 2 DIRIETPDTNEAKELLKFCRKFTVPMRQAMRGKGLMTAKDNAKKPV-LHLCFIAPGHCFV 60
Query: 190 GYSYNHNHSAHLMGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGA 249
GYSY N+S MGI RL+FP++APSRSTLKLEEA FI R + E L M+ VDLGA
Sbjct: 61 GYSYPTNNSQFFMGIPRLRFPSDAPSRSTLKLEEAFHVFIPRDEWDERLAPGMWGVDLGA 120
Query: 250 CPGGWTYQLVKRGLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMV 309
CPGGWTYQLVKR +FV+ VD+G MA SL ETG+I+H DGFKF+ P R+ + W++CDMV
Sbjct: 121 CPGGWTYQLVKRSMFVHCVDNGMMADSLMETGQIKHHMVDGFKFE-PDRKNVTWIICDMV 179
Query: 310 EQPSRIAELMTKWLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAK 369
E+P+R+A LM +W++ GW +FNLKLPMK RY +V Q ++ + L + +K+++QAK
Sbjct: 180 EKPARVAHLMGEWIIKGWAKEALFNLKLPMKGRYDEVLQDIENLKLFLIENKVKFKMQAK 239
Query: 370 HLYHDREEITVYLRLL 385
HLYHDREEITV+++ L
Sbjct: 240 HLYHDREEITVHIQSL 255
>gi|145627823|ref|ZP_01783624.1| transcriptional regulator CysB [Haemophilus influenzae 22.1-21]
gi|144979598|gb|EDJ89257.1| transcriptional regulator CysB [Haemophilus influenzae 22.1-21]
Length = 185
Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats.
Identities = 142/183 (77%), Positives = 159/183 (86%)
Query: 202 MGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKR 261
MGI RLKFPA+APSRSTLKLEEAILTFI R +E + LNE M VDLGACPGGWTYQLVKR
Sbjct: 1 MGIPRLKFPADAPSRSTLKLEEAILTFIPRKEENKRLNENMIGVDLGACPGGWTYQLVKR 60
Query: 262 GLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTK 321
GLFVYAVDHGKMAASLH+TGRIEHCAEDGFKFQP KR+K+DWLVCDMVEQPSRI+ L+ K
Sbjct: 61 GLFVYAVDHGKMAASLHDTGRIEHCAEDGFKFQPLKRKKVDWLVCDMVEQPSRISLLIGK 120
Query: 322 WLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVY 381
WLLNGWC IFNLKLPMKKRY +V CL+ +A L++Q L + +QAKHLYHDREEITV+
Sbjct: 121 WLLNGWCRETIFNLKLPMKKRYQEVILCLENLAVMLAEQNLNFDIQAKHLYHDREEITVH 180
Query: 382 LRL 384
+ L
Sbjct: 181 IAL 183
>gi|145631245|ref|ZP_01787018.1| SAM-dependent methyltransferase [Haemophilus influenzae 22.4-21]
gi|144983172|gb|EDJ90667.1| SAM-dependent methyltransferase [Haemophilus influenzae R3021]
Length = 185
Score = 304 bits (778), Expect = 6e-81, Method: Composition-based stats.
Identities = 141/183 (77%), Positives = 159/183 (86%)
Query: 202 MGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKR 261
MGI RLKFPA+A SRSTLKLEEAILTFI R +E + LNE M VDLGACPGGWTYQLVKR
Sbjct: 1 MGIPRLKFPADASSRSTLKLEEAILTFIPRKEENKRLNENMIGVDLGACPGGWTYQLVKR 60
Query: 262 GLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTK 321
GLFVYAVDHGKMAASLH+TGRIEHCAEDGFKFQPPKR+K+DWLVCDMVEQPSRI+ L+ K
Sbjct: 61 GLFVYAVDHGKMAASLHDTGRIEHCAEDGFKFQPPKRKKVDWLVCDMVEQPSRISLLIGK 120
Query: 322 WLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVY 381
WLLN WC IFNLKLPMKKRY +V CL+ +A L++Q L +++QAKHLYHDREEITV+
Sbjct: 121 WLLNAWCRETIFNLKLPMKKRYQEVILCLENLAVMLAEQNLNFKIQAKHLYHDREEITVH 180
Query: 382 LRL 384
+ L
Sbjct: 181 IAL 183
>gi|28869221|ref|NP_791840.1| hypothetical protein PSPTO_2017 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|81731610|sp|Q884S1|MTFA_PSESM Putative RNA 2'-O-ribose methyltransferase mtfA
gi|28852462|gb|AAO55535.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 357
Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 163/362 (45%), Positives = 214/362 (59%), Gaps = 13/362 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L ++CR GFE E+ +EI D AA V G+A+ ++ F C + A+ L
Sbjct: 1 MNTLFMHCRPGFEGEVCSEIADLAARLDVSGYAKARPDTACAEFICTEADGAERLMNGQR 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIF RQ L DLP+ DRI+ I+ Q LW+E DTN+ KE
Sbjct: 61 FDTLIFPRQW--ARGLFLDLPETDRISVILAQLS------TFPTCGSLWLEVVDTNDGKE 112
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FC+KF PLR+AL + G L P + L L F ++G + N + MG
Sbjct: 113 LSNFCKKFEAPLRKALTQAGKLVDDPRKP---RLLLTFKSGREVFLGLAEADNSAMWPMG 169
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP EAPSRSTLKLEEA FI R Q E L+ M VDLGA PGGWTYQLV+RG+
Sbjct: 170 IPRLKFPREAPSRSTLKLEEAWHHFIPRDQWDERLSGDMTGVDLGAAPGGWTYQLVRRGM 229
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V A+D+G MA SL +TG ++H DGF ++P R +DW+VCD+VE+P+R A L+ WL
Sbjct: 230 LVTAIDNGPMAESLMDTGLVQHLMADGFTYKP--RHPVDWMVCDIVEKPARNAALLETWL 287
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
G C + NLKLPMK+RYA+V++ L I + +G++ + K LYHDREE+T +LR
Sbjct: 288 GEGLCREAVVNLKLPMKQRYAEVRRLLDRIEEGFQARGVRVSIGCKQLYHDREEVTCHLR 347
Query: 384 LL 385
L
Sbjct: 348 RL 349
>gi|66046632|ref|YP_236473.1| hypothetical protein Psyr_3403 [Pseudomonas syringae pv. syringae
B728a]
gi|75501349|sp|Q4ZQY7|MTFA_PSEU2 Putative RNA 2'-O-ribose methyltransferase mtfA
gi|63257339|gb|AAY38435.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
B728a]
Length = 357
Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats.
Identities = 163/362 (45%), Positives = 218/362 (60%), Gaps = 13/362 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L ++CR GFE E+ +EI D AA V G+A+ ++ F C + A+ L
Sbjct: 1 MNTLFMHCRPGFEGEVCSEIADHAARLDVAGYAKARPDTACAEFICTEADGAERLMNGQR 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIF RQ L +LP+ DRI+ I+ Q A LW+E DTN+ KE
Sbjct: 61 FDKLIFPRQW--ARGLFLELPETDRISVILAQLA------AFPICGSLWLEVVDTNDGKE 112
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FC+KF PLR+AL + G L P + L L F ++G + N + MG
Sbjct: 113 LSNFCKKFEAPLRKALTQAGKLVDDPRKP---RLLLTFKSGREVFLGLADADNSAMWPMG 169
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP EAPSRSTLKLEEA FI R Q E L+ M +VDLGA PGGWTYQLV+RG+
Sbjct: 170 IPRLKFPREAPSRSTLKLEEAWHHFIPRDQWDERLSGDMTSVDLGAAPGGWTYQLVRRGM 229
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V A+D+G MA SL +TG ++H DGF ++P R+ +DW+VCD+VE+P+R A L+ WL
Sbjct: 230 LVTAIDNGPMAESLMDTGLVQHLMADGFTYKP--RQPVDWMVCDIVEKPARNAALLETWL 287
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
G C + NLKLPMK+RYA+V++ L I + +G++ + K LYHDREE+T +LR
Sbjct: 288 GEGLCREAVVNLKLPMKQRYAEVRRLLDRIEEGFQARGVRVSIGCKQLYHDREEVTCHLR 347
Query: 384 LL 385
L
Sbjct: 348 RL 349
>gi|119859944|ref|ZP_01641352.1| conserved hypothetical protein [Pseudomonas putida W619]
gi|119813766|gb|EAX16534.1| conserved hypothetical protein [Pseudomonas putida W619]
Length = 355
Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats.
Identities = 168/364 (46%), Positives = 223/364 (61%), Gaps = 17/364 (4%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L ++CR GFE E+ AEI++ AA GV G+A+ S F C + A+ L +L
Sbjct: 1 MNTLFMHCRPGFEGEVCAEISEHAARLGVAGYAKGKPQSACAEFVCAEAEGAERLMAQLR 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F QLIF RQ S + +LP+ DRI+ ++ AL LW+E D+N+ KE
Sbjct: 61 FAQLIFPRQWARGSYI--ELPETDRISVLLEHLA------ALPVFGSLWLEVLDSNDGKE 112
Query: 144 LLGFCRKFTVPLRQALKKQGWL--NAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHL 201
L FCRKF VPLR+AL+K G L NA + L L F+ +VG + +N +
Sbjct: 113 LSTFCRKFEVPLRKALEKAGRLVDNASLPR-----LLLTFISGRRVFVGVAEANNSALWP 167
Query: 202 MGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKR 261
MGI RLKFP EAPSRSTLKLEEA FI R Q + L + M VDLGA PGGWTYQLV+R
Sbjct: 168 MGIPRLKFPREAPSRSTLKLEEAWHQFIPREQWEQRLGDDMTGVDLGASPGGWTYQLVRR 227
Query: 262 GLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTK 321
G+ V A+D+G MA SL +TG ++H DGF +QP ++ +DW+VCD+VE+P+R L+
Sbjct: 228 GMLVTAIDNGPMAESLMDTGLVQHLMADGFTWQP--KQPVDWMVCDIVEKPARTTSLIET 285
Query: 322 WLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVY 381
WL G C + NLKLPMK+RYA+V++ L + + LK + K LYHDREE+T +
Sbjct: 286 WLGEGLCREAVVNLKLPMKQRYAEVRRLLDRMEATFKARKLKVSIACKQLYHDREEVTCH 345
Query: 382 LRLL 385
LR L
Sbjct: 346 LRRL 349
>gi|77460110|ref|YP_349617.1| hypothetical protein Pfl_3889 [Pseudomonas fluorescens PfO-1]
gi|77384113|gb|ABA75626.1| conserved hypothetical protein [Pseudomonas fluorescens PfO-1]
Length = 366
Score = 300 bits (769), Expect = 7e-80, Method: Composition-based stats.
Identities = 163/366 (44%), Positives = 219/366 (59%), Gaps = 19/366 (5%)
Query: 23 KMNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLAREL 82
+MN L ++CR GFE E+ +EI+D AA V G+A+ + F C + A+ L R
Sbjct: 9 RMNTLFMHCRPGFEGEVCSEISDLAARLNVAGYAKAKPATACAEFVCTEEDGAERLMRGQ 68
Query: 83 PFQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAK 142
F +LIF RQ DLP+ DRI+ I +A LW+E DTN+ K
Sbjct: 69 RFAELIFPRQW--ARGFFIDLPENDRISVI------LAHMSEFPVCGSLWLEVVDTNDGK 120
Query: 143 ELLGFCRKFTVPLRQALKKQGWL---NAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSA 199
EL FC+KF PLR+AL G L +KP L L F ++G + N +
Sbjct: 121 ELSNFCKKFEGPLRKALTGAGKLVEDTSKPR------LLLTFKSGREVFLGLADAGNSAM 174
Query: 200 HLMGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLV 259
MGI RLKFP EAPSRSTLKLEEA FI R Q + L+ M VDLGA PGGWT+QLV
Sbjct: 175 WPMGIPRLKFPREAPSRSTLKLEEAWHHFIPRDQWEDRLHSDMTGVDLGAAPGGWTWQLV 234
Query: 260 KRGLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELM 319
RG+ V A+D+G MA SL +TG ++H DGF F+P ++ +DW+VCD+VE+P+R A ++
Sbjct: 235 NRGMLVTAIDNGPMAESLMDTGLVQHLMADGFTFKP--KQPVDWMVCDIVEKPARNAAML 292
Query: 320 TKWLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEIT 379
+W+ G C + NLKLPMK+RYA+V++ L+ IAD +G+K + K LYHDREE+T
Sbjct: 293 EEWIGEGHCREAVVNLKLPMKQRYAEVKRLLERIADGFKARGIKVDIGCKQLYHDREEVT 352
Query: 380 VYLRLL 385
+LR L
Sbjct: 353 CHLRRL 358
>gi|71735327|ref|YP_275483.1| hypothetical protein PSPPH_3325 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|84029354|sp|Q48GK0|MTFA_PSE14 Putative RNA 2'-O-ribose methyltransferase mtfA
gi|71555880|gb|AAZ35091.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 357
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 162/362 (44%), Positives = 216/362 (59%), Gaps = 13/362 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L ++CR GFE E+ +EI+D AA V G+A+ ++ F C + A+ L
Sbjct: 1 MNTLFMHCRPGFEGEVCSEISDHAACLDVAGYAKARPDTACAEFICTEADGAERLMNGQR 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIF RQ + +LP+ DRI+ I+ Q A LW+E DTN+ KE
Sbjct: 61 FDALIFPRQW--ARGMFLELPETDRISVILAQLS------AFPACGSLWLEVVDTNDGKE 112
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L FC+KF PLR+AL + G L P + L L F ++G + N + MG
Sbjct: 113 LSNFCKKFEAPLRKALMQAGKLVDDPRKP---RLLLTFKSGREVFLGLADADNSAMWPMG 169
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP EAPSRSTLKLEEA FI R Q E L+ M VDLGA PGGWTYQLV+RG+
Sbjct: 170 IPRLKFPREAPSRSTLKLEEAWHHFIPRDQWDERLSGDMTGVDLGAAPGGWTYQLVRRGM 229
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V A+D+G MA SL +TG ++H DGF ++P R +DW+VCD+VE+P+R A L+ WL
Sbjct: 230 LVTAIDNGPMAESLMDTGLVQHLMADGFTYKP--RHPVDWMVCDIVEKPARNAALLETWL 287
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
G C + NLKLPMK+RYA+V++ L I + +G++ + K LYHDREE+T +LR
Sbjct: 288 GEGLCREAVVNLKLPMKQRYAEVRRLLDRIEEGFQARGVRVSIGCKQLYHDREEVTCHLR 347
Query: 384 LL 385
L
Sbjct: 348 RL 349
>gi|56477992|ref|YP_159581.1| predicted SAM-dependent methyltransferase [Azoarcus sp. EbN1]
gi|81357102|sp|Q5P1Y4|MTFA_AZOSE Putative RNA 2'-O-ribose methyltransferase mtfA
gi|56314035|emb|CAI08680.1| predicted SAM-dependent methyltransferase [Azoarcus sp. EbN1]
Length = 368
Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 167/358 (46%), Positives = 218/358 (60%), Gaps = 11/358 (3%)
Query: 27 LALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPFQQ 86
LAL CR GFE+E+AAE+ D AA G+ GF R S +V FE ++P LA ++
Sbjct: 17 LAL-CRAGFEKEVAAELDDFAAGIGLTGFVRTRPGSAFVTFETHEPVAFADLAERCDWRT 75
Query: 87 LIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKELLG 146
LIFARQ+L + DLP++DR TPI + A +L +ET DT+EAK+ G
Sbjct: 76 LIFARQLLPWFARVDDLPERDRATPIATATRNAGQRFA-----QLMLETPDTDEAKQQSG 130
Query: 147 FCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGIQR 206
FCR+FTVPL+ L++ G + K LH+ F + ++ + + MGI R
Sbjct: 131 FCRRFTVPLQHELERIGAF--REGAKGLPELHILFPDTSTAWLCAALPGQAALWPMGIPR 188
Query: 207 LKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVY 266
L+ EA SRSTLKL EAI T +S + L + AVDLGA PGGWT+QL RGL V
Sbjct: 189 LRMLREAASRSTLKLAEAIFTLLSETERNASLRAGLRAVDLGAAPGGWTWQLAHRGLRVT 248
Query: 267 AVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNG 326
AVD+G MA S+ T +EH DGF ++P +R ++W+VCDMVEQP+RIA L+ W+ G
Sbjct: 249 AVDNGPMAPSVMATEMVEHVRADGFTWRP--QRPVEWMVCDMVEQPTRIAALVADWIATG 306
Query: 327 WCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRL 384
C IFNLKLPMKKR V+QC LI +L+Q G + L+ KHLYHDREEIT YL L
Sbjct: 307 RCRRTIFNLKLPMKKRLEAVEQCRALITKRLAQAG-PFELRFKHLYHDREEITGYLAL 363
>gi|70729312|ref|YP_259049.1| hypothetical protein PFL_1930 [Pseudomonas fluorescens Pf-5]
gi|84029355|sp|Q4KFD4|MTFA_PSEF5 Putative RNA 2'-O-ribose methyltransferase mtfA
gi|68343611|gb|AAY91217.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 357
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 163/365 (44%), Positives = 215/365 (58%), Gaps = 19/365 (5%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L ++CR GFE E+ +EI D AA V G+A+ ++ F C + A L + L
Sbjct: 1 MNTLFIHCRPGFEGEVCSEIADHAARLNVAGYAKAKPSTACAEFICTEDDGAQRLMQGLR 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIF RQ DLP+ DRI+ I +A LW+E DTN+ KE
Sbjct: 61 FPELIFPRQW--ARGGFIDLPETDRISVI------LAYLANFPQCGSLWLEVVDTNDGKE 112
Query: 144 LLGFCRKFTVPLRQALKKQGWL---NAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAH 200
L FC+KF PLR+AL G L KP L L F +VG + N +
Sbjct: 113 LSNFCKKFEAPLRKALTAAGKLVDDATKPR------LLLTFKSGREVFVGLADAGNSAMW 166
Query: 201 LMGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVK 260
MGI RLKFP EAPSRSTLKLEEA FI R Q E L+ M VDLGA PGGWT+QLV
Sbjct: 167 PMGIPRLKFPREAPSRSTLKLEEAWHHFIPRDQWDERLHGDMTGVDLGAAPGGWTWQLVN 226
Query: 261 RGLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMT 320
RG+ V AVD+G MA SL +TG ++H DGF ++P R+ +DW+VCD+VE+P+R A L+
Sbjct: 227 RGMLVTAVDNGPMAESLMDTGLVQHLMADGFTYKP--RQPVDWMVCDIVEKPARNAALLE 284
Query: 321 KWLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
W+ G C + NLKLPM++RYA+V++ L+ I + +G++ + K LYHDREE+T
Sbjct: 285 TWIGEGHCREAVVNLKLPMRQRYAEVKRLLERIEEGFKARGIRVAIGCKQLYHDREEVTC 344
Query: 381 YLRLL 385
+LR L
Sbjct: 345 HLRRL 349
>gi|91228737|ref|ZP_01262649.1| hypothetical protein V12G01_12545 [Vibrio alginolyticus 12G01]
gi|91187725|gb|EAS74045.1| hypothetical protein V12G01_12545 [Vibrio alginolyticus 12G01]
Length = 243
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 141/239 (58%), Positives = 175/239 (73%), Gaps = 2/239 (0%)
Query: 147 FCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGIQR 206
FCRKFTVP+RQAL+ +G + K N K + LH+ F+ CYVGYSY N+S MGI R
Sbjct: 1 FCRKFTVPMRQALRGKGLMLNKDNAKKPV-LHICFVEPGHCYVGYSYTDNNSQFFMGIPR 59
Query: 207 LKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVY 266
LKFPA+APSRSTLKLEEA FI R + E L M+ VDLGACPGGWTYQLVKR +FV+
Sbjct: 60 LKFPADAPSRSTLKLEEAFHVFIPREEWDERLAPGMWGVDLGACPGGWTYQLVKRSMFVH 119
Query: 267 AVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNG 326
VD+G MA SL ETG+I+H DGFKF+ P R+ + W+VCDMVE+P+R+A LM +WLL G
Sbjct: 120 CVDNGMMADSLMETGQIKHHMVDGFKFE-PDRKNVTWIVCDMVEKPARVAHLMGQWLLKG 178
Query: 327 WCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRLL 385
W IFNLKLPMK RY +V Q L+ + L +K++LQAKHLYHDREEIT++++ L
Sbjct: 179 WAKEAIFNLKLPMKGRYDEVLQDLENLKQFLIDNKVKFKLQAKHLYHDREEITIHIQCL 237
>gi|146306933|ref|YP_001187398.1| SAM-dependent methyltransferase-like protein [Pseudomonas mendocina
ymp]
gi|145575134|gb|ABP84666.1| SAM-dependent methyltransferase-like protein [Pseudomonas mendocina
ymp]
Length = 351
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 165/363 (45%), Positives = 213/363 (58%), Gaps = 19/363 (5%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L L+CR GFE E+ AEITD AA V G+++ S F C + D + + R +
Sbjct: 1 MNTLFLHCRPGFEGEVCAEITDLAARLDVPGYSKAKPGSACAEFVCSEAADGERMMRSVR 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIF RQ ++ LP+ DRI+ ++ +AD LW+E DTN+ KE
Sbjct: 61 FNSLIFPRQWARGGFVM--LPESDRISVLL---DALADYPV---CGSLWLEVVDTNDGKE 112
Query: 144 LLGFCRKFTVPLRQALKKQGWL---NAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAH 200
L FC+KF PLR+AL K G L KP L L F + G + N +
Sbjct: 113 LSTFCKKFEAPLRKALLKAGKLVDDARKPR------LLLTFKSGREVFAGIAEADNQAMW 166
Query: 201 LMGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVK 260
MGI RLKFP EAPSRSTLKLEEA FI R Q + L M AVDLGA PGGWT+QLV
Sbjct: 167 PMGIPRLKFPREAPSRSTLKLEEAWHHFIPREQWDQRLAPGMTAVDLGAAPGGWTWQLVN 226
Query: 261 RGLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMT 320
R + V AVD+G MA SL +G + H DGF F+P R + W+VCD+VE+P+R A ++
Sbjct: 227 REIRVTAVDNGPMAESLMYSGFVVHQRADGFTFRP--RHPVHWMVCDIVEKPARTAAMIE 284
Query: 321 KWLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
WL G C + NLKLPMK+RYA+V++ L I L+++GLK + K LYHDREE+T
Sbjct: 285 TWLGEGLCREAVVNLKLPMKQRYAEVRRLLDRIESGLAERGLKVSIGCKQLYHDREEVTC 344
Query: 381 YLR 383
+LR
Sbjct: 345 HLR 347
>gi|90020800|ref|YP_526627.1| hypothetical protein Sde_1153 [Saccharophagus degradans 2-40]
gi|89950400|gb|ABD80415.1| conserved hypothetical protein [Saccharophagus degradans 2-40]
Length = 349
Score = 287 bits (734), Expect = 9e-76, Method: Composition-based stats.
Identities = 155/359 (43%), Positives = 214/359 (59%), Gaps = 12/359 (3%)
Query: 27 LALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPFQQ 86
L CR GFE+E+AAEITD AA G+ G+ + ++GYV F A L + F
Sbjct: 3 LICLCRQGFEKEVAAEITDCAAYAGIAGYVKTNADTGYVEFVLPDLDSATALFEAIRFDD 62
Query: 87 LIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKELLG 146
L+F R V + +DLP++DR +P++ Q AL ++L T DTN+ K L+
Sbjct: 63 LVFVRHWFVTPAIASDLPKEDRASPLMASAQ------ALPPLAKLEPITLDTNDGKALVA 116
Query: 147 FCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGIQR 206
R T +R KK G NAK + + LFF AC +GY N S + GI R
Sbjct: 117 LTRGVTNHMRTVFKKAGAFNAKSDWVGQV---LFFSGEQAC-IGYFPQSNGSLWVGGIPR 172
Query: 207 LKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVY 266
L+ P +APSR+TLKLEEA FI R Q + + +M AVDLGA PGGWT+QLV + +FV
Sbjct: 173 LRAPKDAPSRATLKLEEAWHQFIPREQWDQRIAPSMRAVDLGAAPGGWTWQLVNKSMFVE 232
Query: 267 AVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNG 326
AVD+G MA ++ +G++ H ED F+F P R + WLV D+ ++P+R+AEL+T+W N
Sbjct: 233 AVDNGPMAENIMASGQVTHRMEDAFRFAP--ERAVHWLVSDIADKPARVAELITRWAENK 290
Query: 327 WCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRLL 385
W +FNLKLPMKKRY ++Q C ++I L G++Y L+ K LYHDREE+T +L L
Sbjct: 291 WFKEAVFNLKLPMKKRYIELQLCSEIITLALDNAGIEYTLKFKQLYHDREEVTGHLVLF 349
>gi|88800212|ref|ZP_01115780.1| hypothetical protein MED297_13982 [Reinekea sp. MED297]
gi|88777058|gb|EAR08265.1| hypothetical protein MED297_13982 [Reinekea sp. MED297]
Length = 358
Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 156/358 (43%), Positives = 216/358 (60%), Gaps = 9/358 (2%)
Query: 27 LALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPFQQ 86
+ LYCR GFE+E AE+ + AAE G FG+A NSG+V+FE + LP +
Sbjct: 5 ILLYCRPGFEKECLAEVVETAAESGCFGWANPDMNSGFVVFETTPTPK---VIERLP--E 59
Query: 87 LIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKELLG 146
L+FAR +S L DL ++DR+TPI+ +I ++ ++ E A+ + +
Sbjct: 60 LVFARDAWAISARLADLDERDRLTPIIETVARILKDAGIRQVGDVSCEYAEGEQYRPTAR 119
Query: 147 FCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGIQR 206
F KF P+RQAL++ G L K L LFF ++ +G +A MGI R
Sbjct: 120 FAGKFVHPVRQALRRSGSLTPKTRPDLP-ALRLFFKDSSQVLIGVDRPDGRAAWPMGIAR 178
Query: 207 LKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVY 266
LKFPA APSRSTLKLEEA F+ L N + VDLGA PGGWT+QLV +G+ VY
Sbjct: 179 LKFPAGAPSRSTLKLEEAFSVFLGPQWRDRLQN-SHTGVDLGASPGGWTWQLVNQGMHVY 237
Query: 267 AVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNG 326
A+D+G M +L T +++H DGF ++P R +DW+VCDMVE+P+R+A LM +WL
Sbjct: 238 AIDNGPMDETLMATTQVDHQQADGFIWKPD--RYVDWVVCDMVEKPARVAFLMYEWLHER 295
Query: 327 WCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRL 384
+FNLKLPM+KR+AQ Q+ + + +++Q+ K L+AKHLYHDREEITVYL L
Sbjct: 296 HARYAMFNLKLPMRKRFAQWQEIREFLESRIAQEHPKAELRAKHLYHDREEITVYLDL 353
>gi|58427938|gb|AAW76975.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 357
Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 161/357 (45%), Positives = 221/357 (61%), Gaps = 15/357 (4%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M+ L YCR GFE ELAAE++ +AA G+ G+AR N GYV+F C +A LA +L
Sbjct: 11 MSGLLCYCRQGFEPELAAELSARAAFVGIAGYARTQRNDGYVLFVC---DEAAQLAAKLQ 67
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
+++LIFARQ LVV L + +DRITPI +A + +LWVE D++ K
Sbjct: 68 WRELIFARQKLVVIAELKGIDPKDRITPI------LAALEGQQRFGDLWVEHPDSDAGKP 121
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L G R F LR AL+K G L KP Q LH+ FL + + + + + + +G
Sbjct: 122 LAGLARSFGNALRPALRKAGLLTDKP-QPRQPRLHICFLDGDHALLAVADSADSAPWPLG 180
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK EAPSRS LKL+EA+LT ++ + L+ M A DLGA PGGWT+ L ++ +
Sbjct: 181 IPRLKLLPEAPSRSALKLDEALLTLLTPEEREALVKPGMRAADLGAAPGGWTWVLTRQHV 240
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V +VD+G + A + ETG +EH DGF ++P + +DW+VCDMVEQP R+AE M W+
Sbjct: 241 HVTSVDNGPLRAHVLETGLVEHLRADGFHWKPAQ--PLDWMVCDMVEQPRRVAERMATWV 298
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
GWC + IFNLKLPMKKR+ + + CL+L ++ +++ L R AK LYHDREEITV
Sbjct: 299 REGWCRNTIFNLKLPMKKRWDETRLCLELF-EQQAEKSLIVR--AKQLYHDREEITV 352
>gi|122879286|ref|YP_202360.6| hypothetical protein XOO3721 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84029360|sp|Q5GWE6|MTFA_XANOR Putative RNA 2'-O-ribose methyltransferase mtfA
Length = 347
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 161/357 (45%), Positives = 221/357 (61%), Gaps = 15/357 (4%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M+ L YCR GFE ELAAE++ +AA G+ G+AR N GYV+F C +A LA +L
Sbjct: 1 MSGLLCYCRQGFEPELAAELSARAAFVGIAGYARTQRNDGYVLFVC---DEAAQLAAKLQ 57
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
+++LIFARQ LVV L + +DRITPI +A + +LWVE D++ K
Sbjct: 58 WRELIFARQKLVVIAELKGIDPKDRITPI------LAALEGQQRFGDLWVEHPDSDAGKP 111
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L G R F LR AL+K G L KP Q LH+ FL + + + + + + +G
Sbjct: 112 LAGLARSFGNALRPALRKAGLLTDKP-QPRQPRLHICFLDGDHALLAVADSADSAPWPLG 170
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK EAPSRS LKL+EA+LT ++ + L+ M A DLGA PGGWT+ L ++ +
Sbjct: 171 IPRLKLLPEAPSRSALKLDEALLTLLTPEEREALVKPGMRAADLGAAPGGWTWVLTRQHV 230
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V +VD+G + A + ETG +EH DGF ++P + +DW+VCDMVEQP R+AE M W+
Sbjct: 231 HVTSVDNGPLRAHVLETGLVEHLRADGFHWKPAQ--PLDWMVCDMVEQPRRVAERMATWV 288
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
GWC + IFNLKLPMKKR+ + + CL+L ++ +++ L R AK LYHDREEITV
Sbjct: 289 REGWCRNTIFNLKLPMKKRWDETRLCLELF-EQQAEKSLIVR--AKQLYHDREEITV 342
>gi|94499100|ref|ZP_01305638.1| hypothetical protein RED65_09939 [Oceanobacter sp. RED65]
gi|94428732|gb|EAT13704.1| hypothetical protein RED65_09939 [Oceanobacter sp. RED65]
Length = 352
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 151/359 (42%), Positives = 212/359 (59%), Gaps = 13/359 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M ++ L CR GFE E AAEI AAE G FG+ + + G+V F + L +
Sbjct: 3 MQQVVLLCRQGFEGESAAEIQHLAAEAGCFGYCKT--HDGWVSF-IAEDDVLKTLIEHVS 59
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F++ IF+RQ V + + L DR+ ++ Q L EL + DTNE KE
Sbjct: 60 FKRFIFSRQWFVAGEEIA-LQGHDRVASLLEHSQ------GLPECGELELIHTDTNEGKE 112
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L C+ T PL ++ G+L+ K N+K + +F L +GY + +N + G
Sbjct: 113 LSRLCKSLTAPLATQMRNHGYLSKKRNRKLP-RMMVFLLDGKRALMGYHHANNSNPIPDG 171
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RL+FP +APSRSTLKLEEA F+ +HQ L M AVDLGA PGGWTYQLVKR +
Sbjct: 172 ILRLRFPKDAPSRSTLKLEEAWHVFVPKHQWDTRLALGMRAVDLGAAPGGWTYQLVKRSM 231
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V A+D+G M L +TG++ H EDGF++QP K K+ W+VCDM E P ++ + M +W+
Sbjct: 232 MVDAIDNGPMKGDLMDTGQVNHLREDGFRYQPSK--KVHWMVCDMAESPMKVTKRMVQWV 289
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYL 382
+N WC IFNLKLPMKKR+ +VQQC++ + + ++ + KHLYHDREE+TV++
Sbjct: 290 VNDWCGETIFNLKLPMKKRFQEVQQCIEYMQQTFEENKIEVTIACKHLYHDREEVTVHI 348
>gi|78046480|ref|YP_362655.1| hypothetical protein XCV0924 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78034910|emb|CAJ22555.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 347
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 160/357 (44%), Positives = 219/357 (61%), Gaps = 15/357 (4%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M+ L YCR GFE ELAAE++ +AA G+ G+AR N GYV+F C +A LA +L
Sbjct: 1 MSGLVCYCRQGFEPELAAELSARAAFVGIAGYARTQRNDGYVLFVC---DEAAQLAAKLQ 57
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
+++LIFARQ LVV L + +DRITPI +A + +LWVE D++ K
Sbjct: 58 WRELIFARQKLVVIAELKGIDPKDRITPI------LAALDGHQRFGDLWVEHPDSDAGKP 111
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L G R F LR AL+K G L KP + LH+ FL + + + N + + +G
Sbjct: 112 LAGLARSFGNALRPALRKAGLLTDKPQLR-QPRLHVCFLDGDHAVLAVADNADSAPWPLG 170
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK EAPSRS LKL+EA+LT ++ + L+ M A DLGA PGGWT+ L ++ +
Sbjct: 171 IPRLKLLPEAPSRSALKLDEALLTLLTPEERDALVKPGMRAADLGAAPGGWTWVLTRQHV 230
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V +VD+G + + ETG +EH DGF ++P + +DW+VCDMVEQP R+AE M W+
Sbjct: 231 HVTSVDNGPLREHVLETGLVEHLRADGFHWKPAQ--PLDWMVCDMVEQPRRVAERMATWV 288
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
GWC + IFNLKLPMKKR+ + + CL L ++ +++ L R AK LYHDREEITV
Sbjct: 289 REGWCRNTIFNLKLPMKKRWDETRLCLDLF-EQQAEKSLIVR--AKQLYHDREEITV 342
>gi|15596760|ref|NP_250254.1| hypothetical protein PA1563 [Pseudomonas aeruginosa PAO1]
gi|84321526|ref|ZP_00969881.1| COG2933: Predicted SAM-dependent methyltransferase [Pseudomonas
aeruginosa C3719]
gi|84328135|ref|ZP_00976144.1| COG2933: Predicted SAM-dependent methyltransferase [Pseudomonas
aeruginosa 2192]
gi|107100994|ref|ZP_01364912.1| hypothetical protein PaerPA_01002024 [Pseudomonas aeruginosa PACS2]
gi|81541345|sp|Q9I3F4|MTFA_PSEAE Putative RNA 2'-O-ribose methyltransferase mtfA
gi|9947524|gb|AAG04952.1|AE004584_8 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126166594|gb|EAZ52105.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126193288|gb|EAZ57351.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
Length = 352
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 159/362 (43%), Positives = 213/362 (58%), Gaps = 12/362 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L ++CR GFE E+ AEI + AA + G+A+ S +V F C A+ L R L
Sbjct: 1 MNTLLMHCRPGFEGEVCAEIAEHAATLEIPGYAKSKPASAHVEFVCQDADGAERLMRRLR 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIF RQ + +LP+ RI + +A+ + LW+E DTN KE
Sbjct: 61 FADLIFPRQWARGPGFI-ELPESQRIEVL------LAELASYPVCGSLWLEVLDTNAGKE 113
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
+ FCRKF PLR AL K G L P L L F +VG + N + MG
Sbjct: 114 VSTFCRKFEKPLRAALVKAGRLQEDPALP---RLLLTFRSGREVFVGLAEPRNSALWPMG 170
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP EAPSRSTLKLEEA FI R + + L M AVDLGA PGGWT+QLV R +
Sbjct: 171 IPRLKFPREAPSRSTLKLEEAWHQFIPRSEWDKRLAPDMLAVDLGAAPGGWTWQLVNREM 230
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V AVD+G MA +L +G ++H DG++++P R+++DW+VCD+VE+P+R L+ W+
Sbjct: 231 RVTAVDNGPMAENLMYSGLVDHQKVDGYQYRP--RQRVDWMVCDIVEKPARTGALIETWI 288
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
G C + NLKLPMK+RYA+V++ LQ + + +GLK + K LYHDREE+T +LR
Sbjct: 289 GEGLCREAVVNLKLPMKQRYAEVRKILQRLRESFDARGLKVAIGCKQLYHDREEVTCHLR 348
Query: 384 LL 385
L
Sbjct: 349 RL 350
>gi|116049506|ref|YP_791690.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115584727|gb|ABJ10742.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 352
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 159/362 (43%), Positives = 213/362 (58%), Gaps = 12/362 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L ++CR GFE E+ AEI + AA + G+A+ S +V F C A+ L R L
Sbjct: 1 MNTLLMHCRPGFEGEVCAEIAEHAATLEIPGYAKSKPASAHVEFVCQDADGAERLMRRLR 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F LIF RQ + +LP+ RI + +A+ + LW+E DTN KE
Sbjct: 61 FADLIFPRQWARGPGFI-ELPESQRIEVL------LAELASYPVCGSLWLEVLDTNAGKE 113
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
+ FCRKF PLR AL K G L P L L F +VG + N + MG
Sbjct: 114 VSTFCRKFEKPLRAALVKAGRLQEDPALP---RLLLTFRSGREVFVGLAEPRNSALWPMG 170
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLKFP EAPSRSTLKLEEA FI R + + L M AVDLGA PGGWT+QLV R +
Sbjct: 171 IPRLKFPREAPSRSTLKLEEAWHQFIPRSEWDKRLAPDMLAVDLGAAPGGWTWQLVNREM 230
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V AVD+G MA +L +G ++H DG++++P R+++DW+VCD+VE+P+R L+ W+
Sbjct: 231 RVTAVDNGPMAENLMYSGLVDHQKVDGYQYRP--RQRVDWMVCDIVEKPARTGALIETWI 288
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
G C + NLKLPMK+RYA+V++ LQ + + +GLK + K LYHDREE+T +LR
Sbjct: 289 GEGLCREAVVNLKLPMKQRYAEVRKILQRLRESFDARGLKVVIGCKQLYHDREEVTCHLR 348
Query: 384 LL 385
L
Sbjct: 349 RL 350
>gi|84625171|ref|YP_452543.1| hypothetical protein XOO_3514 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84369111|dbj|BAE70269.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 347
Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 160/357 (44%), Positives = 220/357 (61%), Gaps = 15/357 (4%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M+ L YCR GFE ELAAE++ +AA G+ G+AR N GYV+F C +A LA +L
Sbjct: 1 MSGLLCYCRQGFEPELAAELSARAAFVGIAGYARTQRNDGYVLFVC---DEAAQLAAKLQ 57
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
+++LIFARQ LVV L + +DRITPI +A + +LWVE D++ K
Sbjct: 58 WRELIFARQKLVVIAELKGIDPKDRITPI------LAALEGQQRFGDLWVEHPDSDAGKP 111
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L R F LR AL+K G L KP Q LH+ FL + + + + + + +G
Sbjct: 112 LASLARSFGNALRPALRKAGLLTDKP-QPRQPRLHICFLDGDHALLAVADSADSAPWPLG 170
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK EAPSRS LKL+EA+LT ++ + L+ M A DLGA PGGWT+ L ++ +
Sbjct: 171 IPRLKLLPEAPSRSALKLDEALLTLLTPEEREALVKPGMRAADLGAAPGGWTWVLTRQHV 230
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V +VD+G + A + ETG +EH DGF ++P + +DW+VCDMVEQP R+AE M W+
Sbjct: 231 HVTSVDNGPLRAHVLETGLVEHLRADGFHWKPAQ--PLDWMVCDMVEQPRRVAERMATWV 288
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
GWC + IFNLKLPMKKR+ + + CL+L ++ +++ L R AK LYHDREEITV
Sbjct: 289 REGWCRNTIFNLKLPMKKRWDETRLCLELF-EQQAEKSLIVR--AKQLYHDREEITV 342
>gi|21241659|ref|NP_641241.1| hypothetical protein XAC0889 [Xanthomonas axonopodis pv. citri str.
306]
gi|81804699|sp|Q8PNZ9|MTFA_XANAC Putative RNA 2'-O-ribose methyltransferase mtfA
gi|21107022|gb|AAM35777.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 347
Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 160/357 (44%), Positives = 219/357 (61%), Gaps = 15/357 (4%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M+ L YCR GFE ELAAE++ +AA G+ G+AR N GYV+F C +A LA +L
Sbjct: 1 MSGLLCYCRPGFEPELAAELSVRAAFVGIAGYARTQRNDGYVLFVC---DEAAQLAAKLQ 57
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
+++LIFARQ LVV L + +DRITPI +A + +LWVE D++ K
Sbjct: 58 WRELIFARQKLVVIAELKGIDPKDRITPI------LAALDGQQRFGDLWVEHPDSDAGKP 111
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L G R F LR AL+K G L KP Q LH+ FL + + + + + + +G
Sbjct: 112 LAGLARSFGNALRPALRKAGLLTDKP-QPRQPRLHVCFLDGDHALLAVADSADSAPWPLG 170
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK EAPSRS LKL+EA+LT ++ + L+ M A DLGA PGGWT+ L ++ +
Sbjct: 171 IPRLKLLPEAPSRSALKLDEALLTLLTPEERDALVKPGMRAADLGAAPGGWTWVLTRQHV 230
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V +VD+G + + ETG +EH DGF ++P + +DW+VCDMVEQP R+AE M W+
Sbjct: 231 HVTSVDNGPLREHVLETGLVEHLRADGFHWKPAQ--PLDWMVCDMVEQPRRVAERMATWV 288
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
GWC + IFNLKLPMKKR+ + + CL L ++ +++ L R AK LYHDREEITV
Sbjct: 289 REGWCRNTIFNLKLPMKKRWDETRLCLDLF-EQQAERSLSVR--AKQLYHDREEITV 342
>gi|21230290|ref|NP_636207.1| hypothetical protein XCC0816 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66769716|ref|YP_244478.1| hypothetical protein XC_3414 [Xanthomonas campestris pv. campestris
str. 8004]
gi|81304330|sp|Q4UR65|MTFA_XANC8 Putative RNA 2'-O-ribose methyltransferase mtfA
gi|81796273|sp|Q8PCB8|MTFA_XANCP Putative RNA 2'-O-ribose methyltransferase mtfA
gi|21111838|gb|AAM40131.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575048|gb|AAY50458.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 347
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 159/357 (44%), Positives = 216/357 (60%), Gaps = 15/357 (4%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M+ L YCR GFE ELAAE++ +AA G+ G+AR N GYV+F C +A LA L
Sbjct: 1 MSGLLCYCRQGFEPELAAELSARAAFVGIAGYARTQRNDGYVLFVC---DEAAQLAARLQ 57
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
+++LIFARQ LVV L L +DRITPI +A +LWVE D++ K
Sbjct: 58 WRELIFARQKLVVLAELKGLDPKDRITPI------LAALDGQPRFGDLWVEHPDSDAGKP 111
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L G R F LR AL+K G L KP + LH+ FL + + + + + + +G
Sbjct: 112 LAGLARSFGNALRPALRKAGLLTDKPQARLP-RLHICFLDGDHALLAVADSSDSAPWPLG 170
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK EAPSRS LKL+EA+LT ++ + +L+ M A DLGA PGGWT+ L ++ +
Sbjct: 171 IPRLKLLPEAPSRSALKLDEALLTLLTPEEREQLVKPGMRAADLGAAPGGWTWVLTRQHV 230
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V +VD+G + + TG +EH DGF ++P + +DW+VCDMVEQP R+AE M W+
Sbjct: 231 HVTSVDNGPLREHVLATGLVEHLRADGFHWKPAQ--PLDWMVCDMVEQPRRVAERMATWV 288
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
GWC IFNLKLPMKKR+ + + CL L ++ +++ L R AK LYHDREEITV
Sbjct: 289 REGWCRHTIFNLKLPMKKRWDETRLCLDLF-EQQAEKSLTVR--AKQLYHDREEITV 342
>gi|152986204|ref|YP_001349121.1| hypothetical protein PSPA7_3767 [Pseudomonas aeruginosa PA7]
gi|150961362|gb|ABR83387.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 352
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 160/365 (43%), Positives = 213/365 (58%), Gaps = 18/365 (4%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MN L ++CR GFE E+ AEI + AA + G+AR S +V F C A+ L R L
Sbjct: 1 MNTLLMHCRPGFEGEVCAEIAEHAATLEIPGYARSKPASAHVEFVCQDVDGAERLMRRLR 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIF RQ + +LP+ RI ++ + + LW+E DTN KE
Sbjct: 61 FAELIFPRQWARGPGFI-ELPESQRIEVLLEELA------SYPVCGSLWLEVLDTNAGKE 113
Query: 144 LLGFCRKFTVPLRQALKKQGWLN---AKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAH 200
+ FCRKF PLR AL K G L A P L L F +VG + N +
Sbjct: 114 VSTFCRKFEKPLRAALVKAGRLQEDLALPR------LLLTFRSGREVFVGLAEPRNSALW 167
Query: 201 LMGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVK 260
MGI RLKFP EAPSRSTLKLEEA FI R + + L M AVDLGA PGGWT+QLV
Sbjct: 168 PMGIPRLKFPREAPSRSTLKLEEAWHQFIPRQEWDKRLAPDMLAVDLGAAPGGWTWQLVN 227
Query: 261 RGLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMT 320
R + V AVD+G MA +L +G ++H DG++++P R+++DW+VCD+VE+P+R L+
Sbjct: 228 REMRVTAVDNGPMAENLMYSGLVDHQKVDGYQYRP--RQRVDWMVCDIVEKPARTGALIE 285
Query: 321 KWLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
W+ G C + NLKLPMK+RYA+V++ LQ + + +GLK K LYHDREE+T
Sbjct: 286 TWIGEGLCREAVVNLKLPMKQRYAEVRKILQRLRESFDARGLKVAFGCKQLYHDREEVTC 345
Query: 381 YLRLL 385
+LR L
Sbjct: 346 HLRRL 350
>gi|119879258|ref|ZP_01646029.1| conserved hypothetical protein [Stenotrophomonas maltophilia
R551-3]
gi|119818342|gb|EAX21053.1| conserved hypothetical protein [Stenotrophomonas maltophilia
R551-3]
Length = 355
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 156/354 (44%), Positives = 208/354 (58%), Gaps = 15/354 (4%)
Query: 27 LALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPFQQ 86
L CR GFE ELA E+ +A+E G G+AR N GYV+F C +A LA L +++
Sbjct: 11 LLCLCRQGFEPELAGELQFRASEAGFAGYARTQRNDGYVLFMC---DEAAALAPRLRWRE 67
Query: 87 LIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKELLG 146
LIFARQ LVV L L DRITP++ + +AD +LWVE D++ K L G
Sbjct: 68 LIFARQKLVVLAELPQLDPADRITPML---EVLADAPRF---GDLWVEHPDSDAGKPLSG 121
Query: 147 FCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGIQR 206
R F LR AL+K G L KPN + LH+ F+ +V + + + +GI R
Sbjct: 122 LARAFGNALRPALRKAGKLTDKPNNRLP-RLHVVFVDGTHAFVCVADPADSAPWALGIPR 180
Query: 207 LKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVY 266
LK EAPSRS LKL+EA+LT ++ + L M A DLGA PGGWT+ L ++ + V
Sbjct: 181 LKLLPEAPSRSALKLDEALLTLLTPEEREALAKPGMRAADLGAAPGGWTWVLTRQHMHVL 240
Query: 267 AVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNG 326
++D+G + + +TG +EH DGF + P + +DW+VCDMVEQP R+AE M W G
Sbjct: 241 SIDNGPLRQHVLDTGLVEHLRADGFHWHP--EQPLDWMVCDMVEQPRRVAERMATWFREG 298
Query: 327 WCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
WC IFNLKLPMKKR+ + + CL L + Q G ++AK LYHDREEITV
Sbjct: 299 WCRHAIFNLKLPMKKRWDETRLCLDLFQE---QAGKPLVVRAKQLYHDREEITV 349
>gi|149376360|ref|ZP_01894123.1| predicted methyltransferase [Marinobacter algicola DG893]
gi|149359374|gb|EDM47835.1| predicted methyltransferase [Marinobacter algicola DG893]
Length = 358
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 205/361 (56%), Gaps = 9/361 (2%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M +L CR GFE E E+TD AA GV+G+ + N G++ F C PG + L + L
Sbjct: 1 MEQLIAICRPGFETEAGRELTDSAAGGGVYGYFEPSVNQGFLTFHCPGPGQVETLLQRLS 60
Query: 84 FQQLIFARQMLVVSDLLTD--LPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEA 141
QL+F R VV L D LP DR+ ++ + + I + + + + + N
Sbjct: 61 IDQLVFVRDWFVV---LADAALPTSDRVGAVIDALRSVEGAIPV--CARVEIRLPENNAD 115
Query: 142 KELLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHL 201
+L F RK+ PL +AL+ G L + L + +G+S N + ++
Sbjct: 116 ADLGNFARKWVSPLSKALRGAGLLGKDSKAESPARLEVLLTGFERAIIGFSLARNRARYV 175
Query: 202 MGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKR 261
GI RL+ PA APSRS LKLEEA F+ QE + L AVDLGA PGGWT+QLV++
Sbjct: 176 GGIPRLRLPASAPSRSALKLEEAWKVFLPPGQELDYLGSGKQAVDLGAAPGGWTWQLVRQ 235
Query: 262 GLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTK 321
G+ V AVD+G M L +G +EH DG++++P RR +DW+VCD+V+ P R +E++
Sbjct: 236 GMMVTAVDNGPMNPELMASGHVEHVEADGYQWRP--RRGVDWMVCDIVDHPRRTSEMVVH 293
Query: 322 WLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVY 381
WL C +FNLKLPMKKRY + C ++ D L++ + + L+A+HLYHDREEIT +
Sbjct: 294 WLSAKLCRYTVFNLKLPMKKRYDEWLACRDILEDGLARTEMNFLLRARHLYHDREEITCF 353
Query: 382 L 382
+
Sbjct: 354 I 354
>gi|15837350|ref|NP_298038.1| hypothetical protein XF0748 [Xylella fastidiosa 9a5c]
gi|81547995|sp|Q9PFD0|MTFA_XYLFA Putative RNA 2'-O-ribose methyltransferase mtfA
gi|9105638|gb|AAF83558.1|AE003916_12 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 351
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 210/358 (58%), Gaps = 13/358 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M+ L YCR GFE ELAAE+ D+A G+ G N G+V+ C P D L ++L
Sbjct: 1 MSGLIAYCRQGFEPELAAELRDRAVLLGIAGDIHAQRNHGFVLLRC-DPLHVDTLLQQLH 59
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
+++LIFARQ L + L L +DRI PI +A +LW+E D++ K
Sbjct: 60 WRRLIFARQTLRLHAELKTLNSRDRIAPI------LAALPKTPCFGDLWIEYPDSDMGKP 113
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L G R F LR L+ G L+A+ + + LH+ FL + +G + + + + +G
Sbjct: 114 LAGLARSFGNALRPVLRSAGRLSAQLHPQWP-RLHVCFLSGDHVLLGSTRSVDSAPWQLG 172
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK EAPSRS LKLEEA++T ++ ++ L M A DLGA PGGWT+ L+++ L
Sbjct: 173 IPRLKLLPEAPSRSALKLEEALITLLTSNEREAKLRPGMRATDLGAAPGGWTWVLIRQHL 232
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V ++D+ + SL ++H DGF++ PP R +DW+VCDMVEQP R+AE M WL
Sbjct: 233 RVTSIDNAVLRPSLLNHPLVQHVRADGFRWTPP--RPMDWMVCDMVEQPRRVAERMAVWL 290
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVY 381
GWC MIFNLKLPMKKR+ + + CL+ +Q + L+AK LYHDREEITVY
Sbjct: 291 REGWCRHMIFNLKLPMKKRWDETRLCLERFE---TQAVVPLTLRAKQLYHDREEITVY 345
>gi|71275159|ref|ZP_00651446.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
gi|71898240|ref|ZP_00680414.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|71163968|gb|EAO13683.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
gi|71731979|gb|EAO34036.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
Length = 351
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 209/358 (58%), Gaps = 13/358 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M+ L YCR GFE ELAAE+ D+A G+ G N G+V+ C P D L ++L
Sbjct: 1 MSGLIAYCRQGFEPELAAELRDRAVLLGIAGDIYAQRNHGFVLLRC-DPLHVDTLLQQLH 59
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
+++LIFARQ L + L L +DRI PI +A +LW+E D++ K
Sbjct: 60 WRRLIFARQTLRLHAELKTLNSRDRIAPI------LAALPKTPCFGDLWIEYPDSDMGKP 113
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L G R F LR L+ G L+A+ + + LH+ FL + +G + + + + +G
Sbjct: 114 LAGLARSFGNALRPVLRSAGRLSAQLHPQWP-RLHVCFLSGDHVLLGSTRSVDSAPWQLG 172
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK EAPSRS LKLEEA++T ++ ++ L M A DLGA PGGWT+ L+++ L
Sbjct: 173 IPRLKLLPEAPSRSALKLEEALITLLTPNEREAKLRPGMQATDLGAAPGGWTWVLIRQHL 232
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V ++D+ + L ++H DGF++ PP R +DW+VCDMVEQP R+AE M WL
Sbjct: 233 RVTSIDNAALRPPLLNHPLVQHVRADGFRWTPP--RPMDWMVCDMVEQPRRVAERMAVWL 290
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVY 381
GWC MIFNLKLPMKKR+ + + CL+ +Q + L+AK LYHDREEITVY
Sbjct: 291 REGWCRHMIFNLKLPMKKRWDETRLCLERFE---TQAAVPLTLRAKQLYHDREEITVY 345
>gi|145637052|ref|ZP_01792715.1| predicted SAM-dependent methyltransferase [Haemophilus influenzae
PittHH]
gi|145269706|gb|EDK09646.1| predicted SAM-dependent methyltransferase [Haemophilus influenzae
PittHH]
Length = 183
Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 122/175 (69%), Positives = 145/175 (82%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+E+AAEITD+A+ GVFGFAR+ +NSGYVIFECYQP +AD LAR++P
Sbjct: 1 MNKLALYCRPGFEKEVAAEITDQASHLGVFGFARVQDNSGYVIFECYQPDEADRLARDIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIFARQM+V+SDLL DL DRI+PIV +++++ + SSEL+VETADTNEAKE
Sbjct: 61 FNRLIFARQMMVISDLLEDLDPADRISPIVTAFEELSQQVNFAQSSELFVETADTNEAKE 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHS 198
L FCRKFTVPLRQALKKQGWL+AK QKCG LH FF++ N CYVGYSY NHS
Sbjct: 121 LSTFCRKFTVPLRQALKKQGWLSAKATQKCGQFLHCFFVKQNCCYVGYSYVDNHS 175
>gi|71901130|ref|ZP_00683236.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|71729094|gb|EAO31219.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
Length = 351
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 208/358 (58%), Gaps = 13/358 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M+ L YCR GFE ELAAE+ D+A G+ G N G+V+ C P D L ++L
Sbjct: 1 MSGLIAYCRQGFEPELAAELRDRAVLLGIAGDIHAQRNHGFVLLRC-DPLHVDTLLQQLH 59
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
+++LIFARQ L + L L +DRI PI +A +LW+E D++ K
Sbjct: 60 WRRLIFARQTLRLHAELKTLNSRDRIAPI------LAALPKTPCFGDLWIEYPDSDMGKP 113
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L G R F LR L+ G L+A+ + + LH+ FL + +G + + + + +G
Sbjct: 114 LAGLARSFGNALRPVLRSAGRLSAQLHPQWP-RLHVCFLSGDHVLLGSTRSVDSAPWQLG 172
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK EAPSRS LKLEEA++T ++ ++ L M A DLGA PGGWT+ L+ + L
Sbjct: 173 IPRLKLLPEAPSRSALKLEEALITLLTPNEREAKLRPGMQATDLGAAPGGWTWVLICQHL 232
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V ++D+ + L ++H DGF++ PP R +DW+VCDMVEQP R+AE M WL
Sbjct: 233 RVTSIDNAALRPPLLNHPLVQHVRADGFRWIPP--RPMDWMVCDMVEQPRRVAERMAVWL 290
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVY 381
GWC MIFNLKLPMKKR+ + + CL+ +Q + L+AK LYHDREEITVY
Sbjct: 291 REGWCRHMIFNLKLPMKKRWDETRLCLERFE---TQAAVPLTLRAKQLYHDREEITVY 345
>gi|28199774|ref|NP_780088.1| hypothetical protein PD1906 [Xylella fastidiosa Temecula1]
gi|81438278|sp|Q87AC0|MTFA_XYLFT Putative RNA 2'-O-ribose methyltransferase mtfA
gi|28057895|gb|AAO29737.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
Length = 351
Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 207/358 (57%), Gaps = 13/358 (3%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M+ L YCR GFE ELAAE+ D+A G+ N G+V+ C P D L ++L
Sbjct: 1 MSGLIAYCRQGFEPELAAELRDRAVLLGIASDIHAQRNHGFVLLRC-DPLHVDTLLQQLH 59
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
+++LIFARQ L + L L +DRI PI +A +LW+E D++ K
Sbjct: 60 WRRLIFARQTLRLHAELKTLNSRDRIAPI------LAALPKTPCFGDLWIEYPDSDMGKP 113
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L G R F LR L+ G L+A+ + + LH+ FL + +G + + + + +G
Sbjct: 114 LAGLARSFGNALRPVLRSAGRLSAQLHPQWP-RLHVCFLSGDHVLLGSTRSVDSAPWQLG 172
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RLK EAPSRS LKLEEA++T ++ ++ L M A DLGA PGGWT+ L+ + L
Sbjct: 173 IPRLKLLPEAPSRSALKLEEALITLLTPNEREAKLRPGMCATDLGAAPGGWTWVLICQHL 232
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
V ++D+ + L ++H DGF++ PP R +DW+VCDMVEQP R+AE M WL
Sbjct: 233 RVTSIDNAALRPPLLNHPLVQHVRADGFRWIPP--RPMDWMVCDMVEQPRRVAERMAVWL 290
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVY 381
GWC MIFNLKLPMKKR+ + + CL+ +Q + L+AK LYHDREEITVY
Sbjct: 291 REGWCRHMIFNLKLPMKKRWDETRLCLERFE---TQAAVPLTLRAKQLYHDREEITVY 345
>gi|145631244|ref|ZP_01787017.1| predicted methyltransferase [Haemophilus influenzae 22.4-21]
gi|144983171|gb|EDJ90666.1| predicted methyltransferase [Haemophilus influenzae R3021]
Length = 183
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 120/175 (68%), Positives = 144/175 (82%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+E+AAEITD+A+ GVFGFAR+ +NSGYVIFECYQP + D LAR++P
Sbjct: 1 MNKLALYCRPGFEKEVAAEITDQASNLGVFGFARVQDNSGYVIFECYQPDEVDRLARDIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIF RQM+VVSDLL DL DRI+PIV +++++ + SSEL+VETADTN+AKE
Sbjct: 61 FNRLIFTRQMIVVSDLLEDLDPADRISPIVVAFEELSQQVNFAQSSELFVETADTNKAKE 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHS 198
L FCRKFTVPLRQALKKQGWL+AK +QKCG LH FF++ N CYVGYSY NHS
Sbjct: 121 LSTFCRKFTVPLRQALKKQGWLSAKASQKCGQFLHCFFVKPNCCYVGYSYVDNHS 175
>gi|120554699|ref|YP_959050.1| hypothetical protein Maqu_1781 [Marinobacter aquaeolei VT8]
gi|120324548|gb|ABM18863.1| conserved hypothetical protein [Marinobacter aquaeolei VT8]
Length = 358
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 146/363 (40%), Positives = 203/363 (55%), Gaps = 7/363 (1%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
M ++ L CR GFE E E+ D AA G+FG+ + N+G V F P A L + +P
Sbjct: 1 MQQIMLMCRPGFETEAGQELMDSAAACGLFGYFQPIRNAGLVRFTLGGPESAFELMQRIP 60
Query: 84 FQQLIFARQ-MLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAK 142
+L+F R LV+ D LP +DR+ ++ ++ + AD +S L +TNE +
Sbjct: 61 LDELVFVRDWFLVIGD--CPLPARDRVGAVI-EFLRGADWQG-SLASRLETRLTETNEDR 116
Query: 143 ELLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLM 202
+L F RK+ PL + L++ L G L L L VG S N S
Sbjct: 117 DLGNFARKWVAPLSRGLREADMLAQDSASAKGDRLELLLLDFETAVVGLSLADNRSPFPQ 176
Query: 203 GIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRG 262
GI RL+ PA APSRS LKLEEA FI + + L AVDLGA PGGWT+QLV++G
Sbjct: 177 GIPRLRLPASAPSRSALKLEEAWKVFIPEDRYLDYLGGGRKAVDLGAAPGGWTWQLVQQG 236
Query: 263 LFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKW 322
+ V AVD+G M L TG +EH DG+ ++P +R +DW+VCD+V++P + A L W
Sbjct: 237 MMVTAVDNGPMNPELMATGHVEHVRADGYAWRP--KRAVDWMVCDIVDKPRKTARLALDW 294
Query: 323 LLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYL 382
+ C +FNLKLPMKKRY + C ++ L++ L RL+A+HLYHDREEIT ++
Sbjct: 295 VGGKLCRYTVFNLKLPMKKRYEEWLICRDILLQGLAEAELNCRLRARHLYHDREEITCFI 354
Query: 383 RLL 385
L
Sbjct: 355 ERL 357
>gi|145627824|ref|ZP_01783625.1| predicted SAM-dependent methyltransferase [Haemophilus influenzae
22.1-21]
gi|144979599|gb|EDJ89258.1| predicted SAM-dependent methyltransferase [Haemophilus influenzae
22.1-21]
Length = 183
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 120/175 (68%), Positives = 142/175 (81%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+E+AAEITD+A+ GVFGFAR+ +NSGYVIFECYQP +A LAR++P
Sbjct: 1 MNKLALYCRPGFEKEVAAEITDQASNLGVFGFARVQDNSGYVIFECYQPDEAARLARDIP 60
Query: 84 FQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKE 143
F +LIF RQM+V+SDLL DL DRI+PIV ++ + + SSEL+VETADTNEAKE
Sbjct: 61 FNRLIFVRQMMVISDLLEDLDPADRISPIVAAFEALLQQVNFAQSSELFVETADTNEAKE 120
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHS 198
L FCRKFTVPLRQALKKQGWL+AK QKCG LH FF+++N CYVGYSY NHS
Sbjct: 121 LSTFCRKFTVPLRQALKKQGWLSAKATQKCGQFLHCFFVKSNCCYVGYSYVDNHS 175
>gi|114320646|ref|YP_742329.1| hypothetical protein Mlg_1490 [Alkalilimnicola ehrlichei MLHE-1]
gi|114227040|gb|ABI56839.1| conserved hypothetical protein [Alkalilimnicola ehrlichei MLHE-1]
Length = 360
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 143/354 (40%), Positives = 198/354 (55%), Gaps = 23/354 (6%)
Query: 29 LYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPFQ-QL 87
L CR GF +LAAE+ +++ GV G+ R+ + G V F AD R LP L
Sbjct: 17 LQCRPGFGADLAAELAAWSSDAGVAGWPRVENDQGRVDFH-----SAD--GRPLPTPPAL 69
Query: 88 IFARQMLVVSDLLTDLPQQDRITPIVHQYQ-QIADTIALKNSSELWVETADTNEAKELLG 146
FARQ V LP++DR+ ++ + + +A +W+E DTN+ K L
Sbjct: 70 TFARQAWPVVADCPQLPERDRVGALLEALAPHLPEALA-----GVWLEHPDTNDGKALGR 124
Query: 147 FCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGIQR 206
FCRKF L +AL+++G + LHL+F + G + + MGI R
Sbjct: 125 FCRKFRPHLERALRERG---VALERAGAPRLHLWFADSRQVVAGLAPAGSGRPWPMGIPR 181
Query: 207 LKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVY 266
L+ P APSRS LKLEEA+ ++ + L M AVDLGA PGGWT+ L + GL V
Sbjct: 182 LRLPRAAPSRSALKLEEAVGWLLTPVEREAALRPGMSAVDLGAAPGGWTWVLRQAGLHVT 241
Query: 267 AVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNG 326
AVD+G +A SL + H EDGF+++PP R +DWLVCDMVEQP R+A L+ WL++G
Sbjct: 242 AVDNGPLAESLRADRAVRHLREDGFRYRPPHR--VDWLVCDMVEQPHRVARLVRHWLVSG 299
Query: 327 WCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
WC +FNLKLPM++R+ V +C L+ + G + + LYHDREEITV
Sbjct: 300 WCGRALFNLKLPMRRRWQCVAECRALVTGGSGELGWR----SAQLYHDREEITV 349
>gi|121998440|ref|YP_001003227.1| hypothetical protein Hhal_1661 [Halorhodospira halophila SL1]
gi|121589845|gb|ABM62425.1| conserved hypothetical protein [Halorhodospira halophila SL1]
Length = 339
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 144/355 (40%), Positives = 193/355 (54%), Gaps = 31/355 (8%)
Query: 29 LYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPFQQLI 88
L+CR G+E+ LA+E T A E+ V G+ R S YV+F GDA L QL+
Sbjct: 8 LHCRAGYEQTLASEATMAAHERDVHGYCRARAQSAYVVFHA-PAGDAPLPP------QLV 60
Query: 89 FARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTNEAKELLGFC 148
FAR + L LP+ R I A S+ WVE D++ + L FC
Sbjct: 61 FARAGAGLIGELQGLPEGGRAEAIA------AALPPAVGSATPWVEHPDSDAGRPLARFC 114
Query: 149 RKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMGIQRLK 208
R+FT PLR AL + G + P ++ L L F + C+ G + GI RL+
Sbjct: 115 RRFTGPLRHALTQTGVTSGDPQRR----LRLLFPDSRHCFAGIGPREGWPS---GIPRLR 167
Query: 209 FPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAV 268
P APSRS LKLEEA+ + ++ P +AVDLGA PGGWT+ L +RGL V A+
Sbjct: 168 MPRNAPSRSVLKLEEALHRLVPENERPY---PGEHAVDLGAAPGGWTWLLRERGLTVTAI 224
Query: 269 DHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWC 328
D+G +A +L + +EH D F+F+P R ++DWLVCD+V++P IA LMT+WL W
Sbjct: 225 DNGPLAPALADDPGVEHQRTDAFRFRP--RTEVDWLVCDVVDRPQGIARLMTQWLREEWA 282
Query: 329 HSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+ IFNLKLPM++ V+Q L D + G R A LYHDREEITVY R
Sbjct: 283 RAAIFNLKLPMRRPLETVRQAL----DAVRTTGA--RAHAAQLYHDREEITVYAR 331
>gi|83645093|ref|YP_433528.1| predicted SAM-dependent methyltransferase [Hahella chejuensis KCTC
2396]
gi|83633136|gb|ABC29103.1| predicted SAM-dependent methyltransferase [Hahella chejuensis KCTC
2396]
Length = 389
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 130/357 (36%), Positives = 198/357 (55%), Gaps = 16/357 (4%)
Query: 27 LALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELPFQQ 86
L YCR GFE E A E+ + A+ + V+G++++ + +G V + C Q D+ +E+ +
Sbjct: 32 LLAYCRPGFEAECAQELQNIASLQFVYGYSKIDKGTGVVFWRCSQGNPLDVY-KEIEVSR 90
Query: 87 LIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSE---LWVETADTNEAKE 143
IFARQ+ + DR++P+V AL+ L +ET +EA
Sbjct: 91 CIFARQVFCALHDIEIEDTTDRVSPVVE---------ALRPGGAFGFLHIETPLEDEAGS 141
Query: 144 LLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSAHLMG 203
L +K T P+ AL+ G L+ + LHL L + + N SA +G
Sbjct: 142 LQKLAKKLTAPMSAALRNAGVLSKAKTDELP-QLHLVCLSGQHIIAALAVHPNSSALPLG 200
Query: 204 IQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGL 263
I RL+F EAPSRS LK+EEA LT ++ + +L VDLGA PGGWT+ +V +G+
Sbjct: 201 IPRLRFRNEAPSRSALKIEEAFLTMLTPAEREFVLKRGQRGVDLGAAPGGWTWYMVTQGV 260
Query: 264 FVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWL 323
+ AVDHG + L E + + ++DG+ ++P +RK+DW+VCD+V++P R E M WL
Sbjct: 261 KMTAVDHGALQQELLEDPAVTYVSDDGYVYKP--QRKVDWVVCDIVDKPKRTMERMADWL 318
Query: 324 LNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
W +FNLKLPMK R +V+ CLQ + ++L ++ ++ K LYHDREE+TV
Sbjct: 319 CYDWTTYALFNLKLPMKTRMDEVEACLQRLQERLLGADIESEVRVKQLYHDREEVTV 375
>gi|110834423|ref|YP_693282.1| hypothetical protein ABO_1562 [Alcanivorax borkumensis SK2]
gi|110647534|emb|CAL17010.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 353
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 149/367 (40%), Positives = 212/367 (57%), Gaps = 31/367 (8%)
Query: 20 INKKMNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLA 79
+N + L CR GFE +LAAE+ AA++ V G+ R NSGYV++ Q A L
Sbjct: 6 LNSQSETLLALCRPGFEADLAAELNFHAADQMVAGYPRATANSGYVLWHSQQGSLASLQE 65
Query: 80 RELPFQQLIFARQMLVVSDLLTDLPQQDRITPIVHQYQQIADTIALKNSSELWVETADTN 139
LIFAR + V +D+ DRI+ + + A SEL++E DTN
Sbjct: 66 -----SGLIFARTLSVCEGEFSDI-GDDRISALWPLLE------AAGPFSELYLEHPDTN 113
Query: 140 EAKELLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYVGYSYNHNHSA 199
E +EL F R F L LKK G L + Q+ LHLFF ++ +VG S + +
Sbjct: 114 EGRELQRFLRGFRKALEPRLKKVGLLRRQAKQR----LHLFFSDSHNGWVGTSPS---AV 166
Query: 200 HLM--GIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQ 257
L+ G+ RL+ PAEAPSRS LK+EEA++ F + LN AVDLGA PGGW++Q
Sbjct: 167 PLVEGGVLRLRLPAEAPSRSALKVEEALIRFFG---SADALNAKT-AVDLGAAPGGWSWQ 222
Query: 258 LVKRGLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAE 317
L +RG+ V AVDHGKMA L + ++H D F ++P R K+D +VCD+V++P+R +
Sbjct: 223 LARRGIRVQAVDHGKMAPRLLDEYPVQHVYGDAFTWRP--RSKVDLVVCDVVDKPARTLQ 280
Query: 318 LMTKWLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIA---DKLSQQGLKYRLQAKHLYHD 374
M KWL GW + +FNLKLPMK+R+ + Q L+ + +++ G + ++A HLY+D
Sbjct: 281 HMEKWLTQGWATAALFNLKLPMKRRFQETWQLLEKLTAAMERMDHLG-EPVIKAAHLYYD 339
Query: 375 REEITVY 381
REEITV+
Sbjct: 340 REEITVW 346
>gi|115378609|ref|ZP_01465762.1| SAM-dependent methyltransferase [Stigmatella aurantiaca DW4/3-1]
gi|115364396|gb|EAU63478.1| SAM-dependent methyltransferase [Stigmatella aurantiaca DW4/3-1]
Length = 404
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 70/171 (40%), Positives = 94/171 (54%), Gaps = 16/171 (9%)
Query: 212 EAPSRSTLKLEEAI--LTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVD 269
+APSR+ +KLEEA+ L F EP VDLGA PGGWT +LV RG V AVD
Sbjct: 243 DAPSRAAMKLEEALDGLPF-----EP---GRGEVCVDLGAAPGGWTQRLVARGARVIAVD 294
Query: 270 HGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWCH 329
K+ L R+ H E F F P DWL CDM +P +A+L+ KW GW
Sbjct: 295 PAKLMPELASHPRVRHIQESAFAFAP--EEPADWLFCDMAWRPLEVAQLLAKWGRRGWAS 352
Query: 330 SMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
++ N+KLPMK + + + ++A++ +GL R LYHDR+E+TV
Sbjct: 353 YLVANIKLPMKDKNPLLVRVRHILAEEGEWKGLTVR----QLYHDRDEVTV 399
>gi|108758667|ref|YP_633496.1| hypothetical protein MXAN_5346 [Myxococcus xanthus DK 1622]
gi|108462547|gb|ABF87732.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 340
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 69/171 (40%), Positives = 93/171 (54%), Gaps = 16/171 (9%)
Query: 212 EAPSRSTLKLEEAI--LTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVD 269
+APSR+ +KLEEA+ L F EP VDLGA PGGWT +LV RG V AVD
Sbjct: 178 DAPSRAAMKLEEALDGLAF-----EP---GRGDVCVDLGAAPGGWTQRLVSRGAKVVAVD 229
Query: 270 HGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWCH 329
++ L R++H E F + P + DWL CDM +P +A+L+ KW GW
Sbjct: 230 PARLMPELTGNPRVKHVQESAFAYAPDE--PADWLFCDMAWRPLEVAQLLAKWGRRGWAQ 287
Query: 330 SMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITV 380
++ N+KLPMK + L + L Q+G L + LYHDR+E+TV
Sbjct: 288 HLVANIKLPMKDK----NPILLRVRHTLGQEGGWEGLTVRQLYHDRDEVTV 334
>gi|153891256|ref|ZP_02012284.1| SAM-dependent methyltransferase-like protein [Opitutaceae bacterium
TAV2]
gi|151582666|gb|EDN46191.1| SAM-dependent methyltransferase-like protein [Opitutaceae bacterium
TAV2]
Length = 358
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 69/188 (36%), Positives = 98/188 (52%), Gaps = 14/188 (7%)
Query: 198 SAHLMGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQ 257
+AH G R+ APSRS LK+EEA + +EP +ET+ VDLGA PGGW+Y
Sbjct: 157 TAHFNGQHRMADDPLAPSRSYLKIEEA---YAVLGREPAA-DETV--VDLGAAPGGWSYS 210
Query: 258 LVKRGLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKI----DWLVCDMVEQPS 313
KRG V A+D+G + + I H ED F ++P K DW+ CD+V+ P
Sbjct: 211 AAKRGARVIAIDNGPLKGGALDHPLITHLREDAFGWRPQKTDTTGGVADWMFCDLVDDPY 270
Query: 314 RIAE-LMTKWLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLY 372
+ L+T WL GWC + LK A +++ L+ + +R+ +HLY
Sbjct: 271 HVMRNLVTPWLEGGWCRRFVVILKFGRTDPIALLRE-LRAADSPFVRHAPGFRI--RHLY 327
Query: 373 HDREEITV 380
HDREE T+
Sbjct: 328 HDREEFTI 335
>gi|145639286|ref|ZP_01794892.1| predicted SAM-dependent methyltransferase [Haemophilus influenzae
PittII]
gi|145271589|gb|EDK11500.1| predicted SAM-dependent methyltransferase [Haemophilus influenzae
PittII]
Length = 83
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/66 (74%), Positives = 59/66 (89%)
Query: 24 MNKLALYCRMGFERELAAEITDKAAEKGVFGFARMAENSGYVIFECYQPGDADLLARELP 83
MNKLALYCR GFE+E+AAEITD+A+ GVFGFAR+ +NSGYVIFECYQP +AD LAR++P
Sbjct: 1 MNKLALYCRPGFEKEVAAEITDQASHLGVFGFARVQDNSGYVIFECYQPDEADRLARDIP 60
Query: 84 FQQLIF 89
F +LIF
Sbjct: 61 FNRLIF 66
>gi|125571168|gb|EAZ12683.1| hypothetical protein OsJ_002508 [Oryza sativa (japonica
cultivar-group)]
Length = 1402
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/129 (42%), Positives = 73/129 (56%), Gaps = 1/129 (0%)
Query: 130 ELWVETADTNEAKELLGFCRKFTVPLRQALKKQGWLNAKPNQKCGLTLHLFFLRNNACYV 189
+LWVE D++ K L G R F LR AL+K G L KPN + LH+ F+ +V
Sbjct: 929 DLWVEHPDSDAGKPLSGLARAFGNALRPALRKAGKLTDKPNTRLP-RLHVVFVDGTHAFV 987
Query: 190 GYSYNHNHSAHLMGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGA 249
+ + + +GI RLK EAPSRS LKL+EA+LT ++ + L M A DLGA
Sbjct: 988 CVADPADSAPWALGIPRLKLLPEAPSRSALKLDEALLTLLTPEEREALAKPGMRAADLGA 1047
Query: 250 CPGGWTYQL 258
PGGWT+ L
Sbjct: 1048 APGGWTWVL 1056
>gi|94986770|ref|YP_594703.1| predicted SAM-dependent methyltransferase [Lawsonia intracellularis
PHE/MN1-00]
gi|94731019|emb|CAJ54382.1| predicted SAM-dependent methyltransferase [Lawsonia intracellularis
PHE/MN1-00]
Length = 308
Score = 89.0 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 10/131 (7%)
Query: 212 EAPSRSTLKLEEAI--LTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVD 269
E PSR+ LKL E +F+ ++E +DLGA PGGWT+ L K G V ++D
Sbjct: 146 EPPSRAYLKLWEVFTRFSFVPSYKE--------LCIDLGASPGGWTWVLAKLGSSVISID 197
Query: 270 HGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWCH 329
+A+ + +EH GF+F P +DW+ DM P+++ + W++N CH
Sbjct: 198 KAPLASHISSLPNVEHYTGSGFRFTPLHIGNVDWIFSDMACYPNKLYNFIQPWIINKNCH 257
Query: 330 SMIFNLKLPMK 340
++I LKL K
Sbjct: 258 TIICTLKLQGK 268
>gi|77869486|gb|ABB05182.1| SAM-dependent methyltransferase-like protein [Xenorhabdus
nematophila]
Length = 79
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 318 LMTKWLLNGWCHSMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREE 377
+MT WL+ WC IFNLKLPMKKRY +V LQ + +L + G+ ++QAKHLYHDREE
Sbjct: 2 MMTDWLVKSWCRETIFNLKLPMKKRYEEVAHILQKMEQQLKENGVNAQIQAKHLYHDREE 61
Query: 378 ITVYLR 383
ITV++R
Sbjct: 62 ITVHVR 67
>gi|42522232|ref|NP_967612.1| methyltransferase [Bdellovibrio bacteriovorus HD100]
gi|39574763|emb|CAE78605.1| methyltransferase [Bdellovibrio bacteriovorus HD100]
Length = 300
Score = 79.0 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 214 PSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVDHGKM 273
PSR+ LKL E + + ++ + + VD G+CPGGWT+ L G V ++D +
Sbjct: 143 PSRAYLKLWELFTVYGIKPKKGQRV------VDFGSCPGGWTWVLQTVGCEVVSIDRAPL 196
Query: 274 AASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWCHSMIF 333
+ ++ + F +P IDW D++ P ++ EL+ W +G C + +
Sbjct: 197 EPHIAALPGVKFMKTNAFNVKPEDIGAIDWFFSDIICYPEKLLELVQNWQASGLCSNFVC 256
Query: 334 NLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+K K Y +++ L L ++ +HL+H++ E+TV+++
Sbjct: 257 TIKFQGKTDYETLKKFLAL-----------ENVRIQHLHHNKHEVTVWIK 295
>gi|46201060|ref|ZP_00207948.1| COG2933: Predicted SAM-dependent methyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 306
Score = 78.6 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 214 PSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVDHGKM 273
PSR+ LKL EA LT E+ +DLGACPGGWT+ L G V +VD +
Sbjct: 147 PSRAYLKLWEA-LTLAG-----EMPGPGQTCIDLGACPGGWTWVLAATGARVISVDKAPL 200
Query: 274 AASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWCHSMIF 333
A ++ +++ F +P + ++DWL D++ P R+ L+ +WL +G + I
Sbjct: 201 APNVAAMPNVDYRQGSAFGLEPAEIGRVDWLCSDVICYPERLLRLVERWLESGLARNFIC 260
Query: 334 NLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRL 384
LK + + + + +L HL H++ E+T ++RL
Sbjct: 261 TLKFQGETDHETARAFAAIPGSRL-----------MHLAHNKHELT-WMRL 299
>gi|78355354|ref|YP_386803.1| hypothetical protein Dde_0307 [Desulfovibrio desulfuricans G20]
gi|78217759|gb|ABB37108.1| conserved hypothetical protein [Desulfovibrio desulfuricans G20]
Length = 308
Score = 78.2 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 214 PSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVDHGKM 273
P+R+ LKL EA R +E EL +DLG+ PGGW++ L + G V++VD +
Sbjct: 151 PTRAYLKLWEAFTITGCRPREDEL------CLDLGSSPGGWSWVLAQCGARVFSVDKAAL 204
Query: 274 AASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWCHSMIF 333
A + I+ C+ F P ++DWL CD++ P R+ ++ +WL G + +
Sbjct: 205 APHIAAHPHIDFCSGSAFGLDPRHAGEVDWLCCDVICYPDRLLAMVARWLELGSVRNFVC 264
Query: 334 NLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRL 384
LK + + +Q + +L HL ++ E+T ++RL
Sbjct: 265 TLKFQGETDHETARQFAAIPGSRLV-----------HLSCNKHELT-WMRL 303
>gi|83313194|ref|YP_423458.1| Predicted SAM-dependent methyltransferase [Magnetospirillum
magneticum AMB-1]
gi|82948035|dbj|BAE52899.1| Predicted SAM-dependent methyltransferase [Magnetospirillum
magneticum AMB-1]
Length = 306
Score = 75.9 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 214 PSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVDHGKM 273
PSR+ LKL EA LT E+ VDLGACPGGWT+ L G V +VD +
Sbjct: 147 PSRAYLKLWEA-LTLAG-----EMPGPGQTCVDLGACPGGWTWVLASTGARVISVDKAPL 200
Query: 274 AASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWCHSMIF 333
A ++ +E F +P + +DWL D++ P R+ L+ +W+ G + I
Sbjct: 201 APNVAAMPNVEVRQGSAFGIEPSEIGPVDWLCSDVICYPERLLRLVERWIKAGLARNFIC 260
Query: 334 NLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLRL 384
LK + + + + +L HL H++ E+T ++RL
Sbjct: 261 TLKFQGETDHQTARAFAAIPGSRLL-----------HLSHNKHELT-WMRL 299
>gi|42528041|ref|NP_973139.1| hypothetical protein TDE2541 [Treponema denticola ATCC 35405]
gi|41819086|gb|AAS13058.1| conserved domain protein [Treponema denticola ATCC 35405]
Length = 314
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 22/146 (15%)
Query: 214 PSRSTLKLEEAILT---FISRHQEPELLNETMYA-------------------VDLGACP 251
PSR+ LK+ EA+ ++ ++QE L E A +D GACP
Sbjct: 131 PSRAYLKMWEALTLLNFYLKKYQEKNSLAEKTEAMTTASFGKKNSLPAADSVCLDAGACP 190
Query: 252 GGWTYQLVKRGLFVYAVDHGKMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQ 311
GGW++ L G + A+D + L IE D F +P KIDWL D++
Sbjct: 191 GGWSWVLDSLGCKIIAIDRSPLRPDLMAKKNIEFIKHDAFTLKPEDIGKIDWLCSDVICY 250
Query: 312 PSRIAELMTKWLLNGWCHSMIFNLKL 337
P R+ + + KW+ + C I +K+
Sbjct: 251 PPRLYDWIIKWIDSDLCEKFICTIKM 276
>gi|120601354|ref|YP_965754.1| hypothetical protein Dvul_0304 [Desulfovibrio vulgaris subsp.
vulgaris DP4]
gi|120561583|gb|ABM27327.1| conserved hypothetical protein [Desulfovibrio vulgaris subsp.
vulgaris DP4]
Length = 303
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Query: 212 EAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVDHG 271
+ P+R+ LKL E + EL +D+G+CPGGWT+ L G V++VD
Sbjct: 145 DPPTRAYLKLWETFTRLGVQPAPGEL------CLDMGSCPGGWTWVLAGLGAHVFSVDKA 198
Query: 272 KMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWCHSM 331
+A + + C F P +DW D++ P R+ + +WL G C +
Sbjct: 199 DIAPHIAAMPNVNFCTGSAFGLDPQHAGAVDWFFSDVICYPDRLLATVQRWLERGQCRNF 258
Query: 332 IFNLKL 337
+ LK
Sbjct: 259 VCTLKF 264
>gi|46581476|ref|YP_012284.1| hypothetical protein DVU3073 [Desulfovibrio vulgaris subsp.
vulgaris str. Hildenborough]
gi|46450898|gb|AAS97544.1| conserved domain protein [Desulfovibrio vulgaris subsp. vulgaris
str. Hildenborough]
Length = 303
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Query: 212 EAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVDHG 271
+ P+R+ LKL E + EL +D+G+CPGGWT+ L G V++VD
Sbjct: 145 DPPTRAYLKLWETFTRLGVQPAPGEL------CLDMGSCPGGWTWVLAGLGARVFSVDKA 198
Query: 272 KMAASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWCHSM 331
+A + + C F P +DW D++ P R+ + +WL G C +
Sbjct: 199 DIAPHIAAMPNVNFCTGSAFGLDPQHAGAVDWFFSDVICYPDRLLATVQRWLERGQCRNF 258
Query: 332 IFNLKL 337
+ LK
Sbjct: 259 VCTLKF 264
>gi|54293591|ref|YP_126006.1| hypothetical protein lpl0643 [Legionella pneumophila str. Lens]
gi|53753423|emb|CAH14876.1| hypothetical protein [Legionella pneumophila str. Lens]
Length = 304
Score = 68.2 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 211 AEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVDH 270
A P+R+ LKL EA+ ++++ P ET+ +DLGA PGGWTY + G V +VD
Sbjct: 147 ANPPNRAYLKLWEALF-LLNKYPRP---GETV--LDLGASPGGWTYVMQSVGTQVTSVDK 200
Query: 271 GKMAASLHETGRIEHCAEDGFKFQPPK-RRKIDWLVCDMVEQPSRIAELMTKWLLNGWCH 329
++ + R+ + F P + DW++ D+ P R L+ KW+ +
Sbjct: 201 AELDTKIMALPRVSFLKQSAFALDPEQLTESYDWVLSDVACYPDRAYTLIKKWIASKKAR 260
Query: 330 SMIFNLKL 337
+IF +KL
Sbjct: 261 QLIFTIKL 268
>gi|144900262|emb|CAM77126.1| hypothetical SAM-dependent methyltransferase [Magnetospirillum
gryphiswaldense MSR-1]
Length = 313
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 214 PSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVDHGKM 273
PSR+ LKL +A T + +P ET +DLGACPGGWT+ L G V AVD +
Sbjct: 157 PSRAYLKLWDA-FTVLGFGPKP---GET--CLDLGACPGGWTWVLASLGAHVIAVDKAPL 210
Query: 274 AASLHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWCHSMIF 333
+ + E F P +DWL D++ P R+ L+ W G + +
Sbjct: 211 DPKVAAMPGVSIRQESAFGLDPASLGPVDWLFSDIICYPERLYRLVQNWREKGQVKNFLC 270
Query: 334 NLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEITVYLR 383
+K + +A + +L HL H++ E+T LR
Sbjct: 271 TIKFQGETDHATAAAFAAIPGSRL-----------LHLSHNKHELTWVLR 309
>gi|148360742|ref|YP_001251949.1| hypothetical SAM-dependent methyltransferase [Legionella
pneumophila str. Corby]
gi|148282515|gb|ABQ56603.1| hypothetical SAM-dependent methyltransferase [Legionella
pneumophila str. Corby]
Length = 287
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 214 PSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVDHGKM 273
P+R+ LKL EA+ ++++ P ET+ +DLGA PGGWTY + G V +VD ++
Sbjct: 150 PNRAYLKLWEALF-LLNKYPLP---GETV--LDLGASPGGWTYVMQSLGTQVTSVDKAEL 203
Query: 274 AASLHETGRIEHCAEDGFKFQPPK-RRKIDWLVCDMVEQPSRIAELMTKWLLNGWCHSMI 332
+ R+ + F P + DW++ D+ P R L+ KW+ + +I
Sbjct: 204 DTKIMALPRVSFLKQSAFALDPEQLTESYDWVLSDVACYPDRAYTLIKKWIASKKAKQLI 263
Query: 333 FNLKL 337
F +KL
Sbjct: 264 FTIKL 268
>gi|52840845|ref|YP_094644.1| hypothetical SAM-dependent methyltransferase [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|54296628|ref|YP_122997.1| hypothetical protein lpp0659 [Legionella pneumophila str. Paris]
gi|52627956|gb|AAU26697.1| hypothetical SAM-dependent methyltransferase [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|53750413|emb|CAH11807.1| hypothetical protein [Legionella pneumophila str. Paris]
Length = 304
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 214 PSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVDHGKM 273
P+R+ LKL EA+ ++++ P ET+ +DLGA PGGWTY + G V +VD ++
Sbjct: 150 PNRAYLKLWEALF-LLNKYPLP---GETV--LDLGASPGGWTYVMQSLGTQVTSVDKAEL 203
Query: 274 AASLHETGRIEHCAEDGFKFQPPK-RRKIDWLVCDMVEQPSRIAELMTKWLLNGWCHSMI 332
+ R+ + F P + DW++ D+ P R L+ KW+ + +I
Sbjct: 204 DTKIMALPRVSFLKQSAFALDPEQLTESYDWVLSDVACYPDRAYTLIKKWIASKKAKQLI 263
Query: 333 FNLKL 337
F +KL
Sbjct: 264 FTIKL 268
>gi|66815485|ref|XP_641759.1| hypothetical protein DDBDRAFT_0205684 [Dictyostelium discoideum
AX4]
gi|60469792|gb|EAL67779.1| hypothetical protein DDBDRAFT_0205684 [Dictyostelium discoideum
AX4]
Length = 636
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Query: 214 PSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRGLFVYAVDHGKM 273
PSRS LKL E F + +DLG+ PGGWT + +G V ++D +
Sbjct: 466 PSRSFLKLFELFQKFPPNLTPFPSMKPNETVIDLGSSPGGWTLFSLLQGCHVTSIDKSPL 525
Query: 274 AAS---LHETGRIEHCAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMTKWLLNGWCHS 330
+ L+++ ++ + F+F P DWL+ DM P + L+ +WL C +
Sbjct: 526 NSKCLDLNDSRNLKFLEMNAFEFNP--ESSFDWLIIDMKVPPMKSLILLDQWLNLKLCRN 583
Query: 331 MIFNLKL 337
I NLK
Sbjct: 584 FIVNLKF 590
>gi|86609471|ref|YP_478233.1| hypothetical protein CYB_2023 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558013|gb|ABD02970.1| hypothetical protein CYB_2023 [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 315
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/183 (31%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 203 GIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGWTYQLVKRG 262
GI R + E SRS KL EAI F Q P L A+DLGA PGGW+ L G
Sbjct: 142 GIHRFRQDPEQISRSEFKLLEAIQVF----QIP--LVPGGQALDLGAAPGGWSRILRLYG 195
Query: 263 LFVYAVDHGKMAASLHETGRIEH--CAEDGFKFQPPKRRKIDWLVCDMVEQPSRIAELMT 320
V AVD + L + I H + + + P R + ++ DM A LM
Sbjct: 196 QQVTAVDPADLDERLSQDPGICHHRLSAQAYLARGPGRFHL--ILNDMRMDGPASARLMV 253
Query: 321 KWLLNGWCHS-MIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHLYHDREEIT 379
+ + + LKLP + R ++Q L+++ ++A+HL+H+R E+T
Sbjct: 254 AFAPHLQPQGRAVMTLKLPRQHRLRVLRQSLEILGSAFPL------VRARHLFHNRSEVT 307
Query: 380 VYL 382
+YL
Sbjct: 308 LYL 310
>gi|86606840|ref|YP_475603.1| ribosomal RNA large subunit methytransferase J [Synechococcus sp.
JA-3-3Ab]
gi|86555382|gb|ABD00340.1| ribosomal RNA large subunit methytransferase J [Synechococcus sp.
JA-3-3Ab]
Length = 356
Score = 58.2 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 17/192 (8%)
Query: 195 HNHSAHLMGIQRLKFPAEAPSRSTLKLEEAILTFISRHQEPELLNETMYAVDLGACPGGW 254
N S G+ R + + SR+ KL EAI F + P L A+DLGA PGGW
Sbjct: 168 QNLSTWAGGVHRFRRDPDQISRAEFKLLEAIQVF----RVP--LQPGGRALDLGAAPGGW 221
Query: 255 TYQLVKRGLFVYAVDHGKMAASL-HETGRIEH-CAEDGFKFQPPKRRKIDWLVCDMVEQP 312
+ L G V AVD ++ L H+ G H + + + P + + ++ DM
Sbjct: 222 SRILRLHGQQVTAVDPAELDERLRHDAGICHHRLSAQAYLARCPGQFHL--ILNDMRMDG 279
Query: 313 SRIAELMTKWLLNGWCH-SMIFNLKLPMKKRYAQVQQCLQLIADKLSQQGLKYRLQAKHL 371
A LM + + + + LKLP + R ++Q L ++ ++A+HL
Sbjct: 280 RASAHLMAAFAPHLEPQGAAVMTLKLPHQHRLRVLRQTLDILGSAFPV------VRARHL 333
Query: 372 YHDREEITVYLR 383
+H+R EIT+YL+
Sbjct: 334 FHNRSEITLYLQ 345
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.323 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,367,192,454
Number of Sequences: 5470121
Number of extensions: 54407372
Number of successful extensions: 110301
Number of sequences better than 1.0e-05: 166
Number of HSP's better than 0.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 109708
Number of HSP's gapped (non-prelim): 169
length of query: 385
length of database: 1,894,087,724
effective HSP length: 135
effective length of query: 250
effective length of database: 1,155,621,389
effective search space: 288905347250
effective search space used: 288905347250
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 130 (54.7 bits)