| Kingdom |
Category |
Genus/Species |
Count |
|
|
|
38 |
| Archaea |
|
|
5 |
| |
|
|
38 |
| |
Crenarchaeota |
|
2 |
| |
|
Ignicoccus hospitalis (iho) |
1 |
| |
|
Staphylothermus marinus (smr) |
1 |
| |
Euryarchaeota |
|
3 |
| |
|
Methanococcus aeolicus (mae) |
1 |
| |
|
Methanoculleus marisnigri (mem) |
1 |
| |
|
Uncultured methanogenic archaeon RC-I (rci) |
1 |
| Bacteria |
|
|
5933 |
| |
Acidobacteria |
|
15 |
| |
|
Acidobacteria bacterium (aba) |
4 |
| |
|
Solibacter usitatus (sus) |
11 |
| |
Actinobacteria |
|
38 |
| |
|
Arthrobacter aurescens (aau) |
2 |
| |
|
Acidothermus cellulolyticus (ace) |
1 |
| |
|
Clavibacter michiganensis (cmi) |
1 |
| |
|
Frankia alni (fal) |
1 |
| |
|
Kineococcus radiotolerans (kra) |
2 |
| |
|
Leifsonia xyli xyli CTCB07 (lxx) |
1 |
| |
|
Mycobacterium avium 104 (mav) |
2 |
| |
|
Mycobacterium gilvum (mgi) |
1 |
| |
|
Mycobacterium sp. JLS (mjl) |
1 |
| |
|
Mycobacterium sp. KMS (mkm) |
1 |
| |
|
Nocardioides sp. JS614 (nca) |
2 |
| |
|
Nocardia farcinica (nfa) |
3 |
| |
|
Rhodococcus sp. RHA1 (rha) |
1 |
| |
|
Rubrobacter xylanophilus (rxy) |
5 |
| |
|
Salinispora arenicola (saq) |
2 |
| |
|
Streptomyces coelicolor (sco) |
7 |
| |
|
Saccharopolyspora erythraea (sen) |
4 |
| |
|
Streptomyces avermitilis (sma) |
1 |
| |
Bacteroides |
|
2 |
| |
|
Flavobacterium johnsoniae (fjo) |
1 |
| |
|
Flavobacterium psychrophilum (fps) |
1 |
| |
Chlamydia |
|
1 |
| |
|
Candidatus Protochlamydia amoebophila (pcu) |
1 |
| |
Cyanobacteria |
|
8 |
| |
|
Acaryochloris marina (amr) |
1 |
| |
|
Cyanobacteria Yellowstone A-Prime (cya) |
1 |
| |
|
Gloeobacter violaceus (gvi) |
3 |
| |
|
Prochlorococcus marinus MIT 9303 (pmf) |
1 |
| |
|
Synechococcus elongatus PCC6301 (syc) |
1 |
| |
|
Trichodesmium erythraeum (ter) |
1 |
| |
Deinococcus-Thermus |
|
5 |
| |
|
Deinococcus geothermalis (dge) |
3 |
| |
|
Thermus thermophilus HB27 (tth) |
1 |
| |
|
Thermus thermophilus HB8 (ttj) |
1 |
| |
Firmicutes |
|
32 |
| |
|
Alkaliphilus metalliredigens (amt) |
2 |
| |
|
Alkaliphilus oremlandii (aoe) |
1 |
| |
|
Bacillus amyloliquefaciens (bay) |
1 |
| |
|
Bacillus cereus ATCC 10987 (bca) |
1 |
| |
|
Bacillus clausii (bcl) |
1 |
| |
|
Bacillus cereus subsp. cytotoxis NVH 391-98 (bcy) |
1 |
| |
|
Bacillus licheniformis DSM13 (bld) |
3 |
| |
|
Bacillus subtilis (bsu) |
4 |
| |
|
Clostridium acetobutylicum (cac) |
1 |
| |
|
Clostridium beijerinckii (cbe) |
1 |
| |
|
Clostridium difficile (cdf) |
2 |
| |
|
Clostridium perfringens 13 (cpe) |
1 |
| |
|
Caldicellulosiruptor saccharolyticus (csc) |
1 |
| |
|
Clostridium tetani E88 (ctc) |
2 |
| |
|
Clostridium thermocellum (cth) |
1 |
| |
|
Geobacillus kaustophilus (gka) |
1 |
| |
|
Geobacillus thermodenitrificans (gtn) |
3 |
| |
|
Lactobacillus delbrueckii ATCC BAA-365 (lbu) |
1 |
| |
|
Moorella thermoacetica (mta) |
1 |
| |
|
Oceanobacillus iheyensis (oih) |
2 |
| |
|
Thermoanaerobacter tengcongensis (tte) |
1 |
| |
Green nonsulfur bacteria |
|
5 |
| |
|
Chloroflexus aurantiacus (cau) |
1 |
| |
|
Dehalococcoides sp. BAV1 (deb) |
2 |
| |
|
Roseiflexus castenholzii DSM13941 (rca) |
1 |
| |
|
Roseiflexus sp. RS-1 (rrs) |
1 |
| |
Green sulfur bacteria |
|
3 |
| |
|
Prosthecochloris vibrioformis (pvi) |
3 |
| |
Hyperthermophilic bacteria |
|
3 |
| |
|
Petrotoga mobilis (pmo) |
1 |
| |
|
Thermotoga lettingae (tle) |
2 |
| |
Planctomyces |
|
3 |
| |
|
Rhodopirellula baltica (rba) |
3 |
| |
Proteobacteria |
|
5818 |
| |
|
Acidovorax avenae (aav) |
1 |
| |
|
Acidiphilium cryptum JF-5 (acr) |
7 |
| |
|
Anaeromyxobacter dehalogenans (ade) |
1 |
| |
|
Alkalilimnicola ehrlichei (aeh) |
1 |
| |
|
Anaeromyxobacter sp. Fw109-5 (afw) |
1 |
| |
|
Acidovorax sp. JS42 (ajs) |
3 |
| |
|
Aeromonas salmonicida (asa) |
1 |
| |
|
Actinobacillus succinogenes (asu) |
1 |
| |
|
Agrobacterium tumefaciens C58 (Cereon) (atc) |
82 |
| |
|
Agrobacterium tumefaciens C58 (UWash/Dupont) (atu) |
5 |
| |
|
Azorhizobium caulinodans (azc) |
17 |
| |
|
Azoarcus sp. BH72 (azo) |
2 |
| |
|
Burkholderia cepacia (bam) |
1 |
| |
|
Bdellovibrio bacteriovorus (bba) |
1 |
| |
|
Bordetella bronchiseptica (bbr) |
1 |
| |
|
Bradyrhizobium sp. BTAi1 (bbt) |
6 |
| |
|
Burkholderia cenocepacia HI2424 (bch) |
4 |
| |
|
Brucella canis (bcs) |
14 |
| |
|
Bartonella henselae (bhe) |
1 |
| |
|
Bradyrhizobium japonicum (bja) |
18 |
| |
|
Brucella abortus (bmb) |
1 |
| |
|
Burkholderia multivorans (bmu) |
3 |
| |
|
Brucella ovis (bov) |
4 |
| |
|
Burkholderia pseudomallei 1710b (bpm) |
2 |
| |
|
Burkholderia pseudomallei K96243 (bps) |
1 |
| |
|
Bordetella petrii (bpt) |
5 |
| |
|
Bartonella quintana (bqu) |
1 |
| |
|
Bradyrhizobium sp. ORS278 (bra) |
8 |
| |
|
Burkholderia thailandensis (bte) |
1 |
| |
|
Burkholderia sp. 383 (bur) |
2 |
| |
|
Burkholderia vietnamiensis (bvi) |
1 |
| |
|
Burkholderia xenovorans (bxe) |
6 |
| |
|
Caulobacter crescentus (ccr) |
2 |
| |
|
Chromohalobacter salexigens (csa) |
3 |
| |
|
Chromobacterium violaceum (cvi) |
1 |
| |
|
Delftia acidovorans (dac) |
9 |
| |
|
Desulfotalea psychrophila (dps) |
2 |
| |
|
Dinoroseobacter shibae (dsh) |
10 |
| |
|
Desulfovibrio vulgaris DP4 (dvl) |
2 |
| |
|
Erwinia carotovora (eca) |
1 |
| |
|
Escherichia coli HS (ecx) |
1 |
| |
|
Erythrobacter litoralis (eli) |
3 |
| |
|
Enterobacter sp. 638 (ent) |
1 |
| |
|
Gluconacetobacter diazotrophicus (gdi) |
5 |
| |
|
Gluconobacter oxydans (gox) |
4 |
| |
|
Hahella chejuensis (hch) |
5 |
| |
|
Halorhodospira halophila (hha) |
1 |
| |
|
Hyphomonas neptunium (hne) |
13 |
| |
|
Jannaschia sp. CCS1 (jan) |
5 |
| |
|
Klebsiella pneumoniae (kpn) |
1 |
| |
|
Magnetospirillum magneticum (mag) |
6 |
| |
|
Marinobacter aquaeolei (maq) |
3 |
| |
|
Methylococcus capsulatus (mca) |
2 |
| |
|
Mesorhizobium sp. BNC1 (mes) |
46 |
| |
|
Methylobacterium extorquens (mex) |
14 |
| |
|
Magnetococcus sp. MC-1 (mgm) |
1 |
| |
|
Mesorhizobium loti (mlo) |
88 |
| |
|
Maricaulis maris (mmr) |
3 |
| |
|
Minibacterium massiliensis (mms) |
1 |
| |
|
Marinomonas sp. MWYL1 (mmw) |
5 |
| |
|
Methylibium petroleiphilum (mpt) |
3 |
| |
|
Myxococcus xanthus (mxa) |
2 |
| |
|
Novosphingobium aromaticivorans (nar) |
1 |
| |
|
Nitrosomonas europaea (neu) |
1 |
| |
|
Nitrobacter hamburgensis (nha) |
24 |
| |
|
Nitrosospira multiformis (nmu) |
3 |
| |
|
Nitrosococcus oceani (noc) |
1 |
| |
|
Nitrobacter winogradskyi (nwi) |
3 |
| |
|
Ochrobactrum anthropi (oan) |
73 |
| |
|
Pseudomonas aeruginosa PAO1 (pae) |
2 |
| |
|
Paracoccus denitrificans (pde) |
26 |
| |
|
Pseudomonas entomophila (pen) |
3 |
| |
|
Pseudomonas fluorescens Pf-5 (pfl) |
5 |
| |
|
Pseudomonas fluorescens PfO-1 (pfo) |
9 |
| |
|
Parvibaculum lavamentivorans (pla) |
8 |
| |
|
Photorhabdus luminescens (plu) |
1 |
| |
|
Pasteurella multocida (pmu) |
1 |
| |
|
Polaromonas sp. JS666 (pol) |
6 |
| |
|
Pelobacter propionicus (ppd) |
1 |
| |
|
Pseudomonas putida F1 (ppf) |
1 |
| |
|
Photobacterium profundum (ppr) |
1 |
| |
|
Pseudomonas putida KT2440 (ppu) |
1 |
| |
|
Pseudomonas stutzeri (psa) |
2 |
| |
|
Pseudomonas syringae pv. syringae B728a (psb) |
2 |
| |
|
Pseudomonas syringae pv. phaseolicola 1448A (psp) |
1 |
| |
|
Pseudomonas syringae pv. tomato DC3000 (pst) |
4 |
| |
|
Roseobacter denitrificans (rde) |
11 |
| |
|
Ralstonia eutropha H16 (reh) |
6 |
| |
|
Rhizobium etli (ret) |
142 |
| |
|
Ralstonia eutropha JMP134 (reu) |
2 |
| |
|
Rhodoferax ferrireducens (rfr) |
1 |
| |
|
Rhizobium leguminosarum (rle) |
152 |
| |
|
Ralstonia metallidurans (rme) |
5 |
| |
|
Rhodopseudomonas palustris CGA009 (rpa) |
3 |
| |
|
Rhodopseudomonas palustris HaA2 (rpb) |
5 |
| |
|
Rhodopseudomonas palustris BisB18 (rpc) |
2 |
| |
|
Rhodopseudomonas palustris BisB5 (rpd) |
3 |
| |
|
Rhodopseudomonas palustris BisA53 (rpe) |
4 |
| |
|
Rhodospirillum rubrum (rru) |
8 |
| |
|
Rhodobacter sphaeroides ATCC 17029 (rsh) |
8 |
| |
|
Ralstonia solanacearum (rso) |
2 |
| |
|
Rhodobacter sphaeroides 2.4.1 (rsp) |
12 |
| |
|
Rhodobacter sphaeroides ATCC 17025 (rsq) |
17 |
| |
|
Sphingopyxis alaskensis (sal) |
1 |
| |
|
Shewanella baltica OS195 (sbn) |
1 |
| |
|
Sorangium cellulosum (scl) |
3 |
| |
|
Saccharophagus degradans (sde) |
1 |
| |
|
Shewanella denitrificans (sdn) |
1 |
| |
|
Shewanella sp. MR-4 (she) |
1 |
| |
|
Silicibacter pomeroyi (sil) |
2 |
| |
|
Silicibacter sp. TM1040 (sit) |
7 |
| |
|
Shewanella loihica (slo) |
1 |
| |
|
Sinorhizobium meliloti (sme) |
4742 |
| |
|
Shewanella oneidensis (son) |
1 |
| |
|
Serratia proteamaculans (spe) |
1 |
| |
|
Shewanella pealeana (spl) |
1 |
| |
|
Salmonella enterica serovar Paratyphi B (spq) |
1 |
| |
|
Shewanella sediminis (sse) |
1 |
| |
|
Sphingomonas wittichii (swi) |
9 |
| |
|
Thiobacillus denitrificans (tbd) |
1 |
| |
|
Vibrio cholerae O395 (vco) |
1 |
| |
|
Verminephrobacter eiseniae (vei) |
6 |
| |
|
Vibrio harveyi (vha) |
1 |
| |
|
Xanthobacter autotrophicus (xau) |
18 |
| |
|
Xanthomonas campestris pv. campestris 8004 (xcb) |
5 |
| |
|
Xanthomonas campestris pv. vesicatoria (xcv) |
1 |
| |
|
Xylella fastidiosa 9a5c (xfa) |
1 |
| |
|
Xylella fastidiosa Temecula1 (xft) |
1 |
| Eukaryotes |
|
|
3 |
| |
Fungi |
|
1 |
| |
|
Aspergillus niger (ang) |
1 |
| |
Protists |
|
2 |
| |
|
Leishmania major (lma) |
1 |
| |
|
Plasmodium falciparum (pfa) |
1 |
| NULL |
|
|
238 |
| TOTAL |
|
|
6217 |
![[space]](http://homer.ornl.gov/compbio/public/images/bluespacer.gif){kind=small}
![[space]](http://maple.lsd.ornl.gov/common/images/bluespacer.gif){kind=small}