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Actinobacillus actinomycetemcomitans Search Results

Record: 1 of 1 MiniMap

Gene ID:AA00028DNA Molecule Name: 1 Genomic Island ID: 6 GenBank ID: Gene Name: Definition: conserved hypothetical protein (possible type III restriction-modification system restriction subunit) Cellular Location: Outer membrane, Cytoplasm [Evidence] Gene Start: 23353 Gene Stop: 20735 Gene Length: 2619 Molecular Weight*: 100172 pI*: Net Charge*: EC: Functional Class: Unknown Gene Ontology: Molecular function GO:0005524 ATP binding GO:0016787 hydrolase activity Pathway: pathway table Comment: View in HOMD Genome Viewer Blast Summary: PSI-Blast Search Top Blast Hits: Updated monthly Click here to view the entire PsiBlast results. gi|74318293|ref|YP_316033.1| hypothetical protein Tbd_2275 ... 714 0.0 gi|154499071|ref|ZP_02037449.1| hypothetical protein BACCAP... 593 e-167 gi|150026203|ref|YP_001297029.1| Probable type III restrict... 580 e-163 gi|68550525|ref|ZP_00589972.1| Type III restriction enzyme,... 260 4e-67 gi|134298734|ref|YP_001112230.1| type III restriction enzym... 259 8e-67 gi|85716201|ref|ZP_01047176.1| Type III restriction enzyme,... 258 2e-66 gi|148266399|ref|YP_001233105.1| type III restriction enzym... 249 5e-64 gi|147676552|ref|YP_001210767.1| hypothetical protein PTH_0... 240 2e-61 gi|126741180|ref|ZP_01756860.1| Type III restriction enzyme... 231 2e-58 gi|113971113|ref|YP_734906.1| type III restriction enzyme, ... 224 1e-56 InterPro Summary: InterProScan

InterPro
IPR006935
Family

Type III restriction enzyme, res subunit
PF04851		ResIII

COGS Summary: COGS Search No hits to the COGs database. Blocks Summary: Blocks Search ProDom Summary: Protein Domain Search Paralogs: Local Blast Search AA00028 is paralogously related to AA02541 (conserved hypothetical protein) (4e-10). Pfam Summary: Pfam Search Top PDB Hits: Gene Protein Sequence: MELNSYQVQVINDLNDYLSELNQYGSHRLKQVFSNYWAKKGVPNQQYVEK ITNTPHICVKVPTAGGKTFIAVNALQSIYSAIEFHGEIKPRFTVWLVPST AILEQTIRSLRNPEHTYRQKLNVLFNGRVNVYEKDDILLGRGFDADTVKS GISIVVMTFDAFRTRNKEGRLIYRENGYLASFDTKATALPDSDETSLINV IRSLEPVVIVDESHNATSDLSLEMLTNLNAKFILDLTATPRKESNIISYV SSLALKKENMVKLPVNASNQASKEDVLISAVTFQRHLEQVAQKAFENGEP YVRPIVLFQAEAKTKGDNTTFEKVKRTLIEELNIPIEQIKIKTADIDELK NVDLFSPDCPVRFVITVNALKEGWDCSFAYILANLANKHSEIDVTQIVGR ILRQPNAKQFSNPLLNMSYVFTASAQFRNVLGNIVEGLTLAGFSPKDYRA IGNNSESNQEFTSELDNLPLTLMSPQQNEPTENGSFDFDTDKLKENIQQS TTGNSEFNPISNEFIQDVVTQSESFNLEVQNSTVTVPNELKEKMNMAKIN AEFKESVENIRIPQFFETMSSGLFDDIVLFEKENLLTKFELNQCGTQISF SDLDPELYSIDIENEQNIKFTPLNKEKSEQLLKLFRDYSLERKKESIVSS LLNFAGRNAFYPIADSEIKVYFRRIIEQMSIADMENCLIKPSIYFDKIKN KIKQLQEKFSQQEFYKWIDQECFQIKAEYQLPIEITPQNFADSLSRSLYE REASMNNYEFNVISRVISLDNVVWWHRIDDKRKEYSFKINGFINHYPDFL ILTKKNTLILVEVKGEQLANPESKNKLELGKKWESLANQLSLPHKFKYFM VFITKPMEGAKSLDELIKTISYL Gene Nucleotide Sequence: Sequence Viewer ATGGAATTAAACAGTTATCAAGTACAAGTGATTAACGATTTAAATGACTA TTTAAGTGAATTAAATCAGTATGGTAGCCACAGATTAAAACAAGTCTTTT CAAATTATTGGGCGAAAAAAGGTGTGCCTAATCAACAGTATGTAGAGAAA ATTACCAATACGCCCCACATTTGCGTCAAAGTGCCAACTGCTGGCGGAAA GACCTTTATTGCGGTTAATGCTTTACAATCAATTTATAGTGCGATCGAAT TTCACGGAGAAATTAAACCACGATTTACCGTTTGGCTTGTGCCATCAACG GCTATTTTAGAACAGACCATTCGGAGTTTACGAAATCCTGAACACACTTA CCGCCAAAAATTAAATGTGCTATTTAATGGGCGTGTGAATGTGTATGAAA AAGATGATATTCTTCTAGGACGTGGATTTGATGCAGATACTGTAAAAAGT GGTATTTCTATTGTAGTAATGACCTTTGATGCGTTTAGAACGAGAAACAA AGAAGGTCGGTTAATTTATCGTGAGAATGGCTATTTAGCTTCTTTTGATA CCAAAGCGACCGCATTGCCTGATAGTGATGAAACTTCGCTAATCAATGTA ATTCGCAGTCTTGAACCAGTTGTGATTGTGGACGAAAGCCATAATGCTAC ATCAGATTTATCGCTAGAAATGCTAACCAATCTAAATGCAAAATTTATCT TAGATTTAACTGCTACACCAAGAAAAGAAAGCAATATAATTTCTTATGTT AGTTCATTAGCATTAAAAAAAGAAAATATGGTAAAACTACCTGTTAATGC ATCTAATCAAGCAAGCAAAGAAGATGTATTGATTTCAGCGGTAACGTTTC AACGTCATTTAGAACAAGTTGCTCAAAAAGCCTTTGAAAATGGCGAGCCT TATGTTCGCCCGATTGTATTATTCCAAGCCGAAGCGAAAACCAAAGGAGA TAATACGACTTTTGAAAAGGTTAAAAGGACGTTAATCGAAGAATTAAACA TTCCAATTGAGCAGATCAAAATCAAAACTGCTGATATAGATGAGCTAAAA AATGTTGATTTATTTTCGCCTGATTGCCCAGTTCGTTTTGTGATTACGGT AAATGCCTTAAAAGAAGGTTGGGACTGTTCTTTTGCTTATATTCTAGCAA ACCTTGCAAATAAACATTCTGAAATTGATGTCACTCAAATTGTAGGGCGT ATTTTGCGCCAACCTAATGCGAAACAGTTTAGCAATCCATTGCTTAATAT GAGCTATGTTTTCACAGCATCCGCCCAATTTAGAAATGTGTTGGGTAATA TCGTCGAAGGTTTAACTTTAGCTGGATTTAGCCCGAAAGATTATCGAGCA ATCGGCAATAATAGTGAAAGCAATCAAGAATTTACTTCAGAGCTTGATAA TTTGCCATTAACATTAATGTCCCCTCAACAAAATGAGCCAACTGAGAATG GATCTTTTGACTTTGATACAGATAAATTAAAAGAGAATATTCAGCAATCA ACAACAGGAAATTCTGAATTTAATCCTATCTCAAATGAATTTATCCAAGA TGTTGTAACACAAAGCGAGAGTTTTAATTTAGAAGTTCAAAATAGCACAG TTACTGTTCCGAATGAATTAAAAGAGAAAATGAATATGGCAAAAATCAAT GCGGAATTTAAGGAATCTGTTGAAAATATCCGTATCCCACAATTTTTTGA AACAATGAGTAGCGGACTGTTTGATGATATTGTTTTATTTGAAAAAGAAA ACTTATTAACGAAATTTGAACTCAATCAATGTGGTACACAAATTTCTTTT TCAGATTTAGATCCTGAATTATATAGCATTGATATTGAAAATGAACAAAA TATTAAATTCACCCCATTGAATAAAGAAAAATCTGAACAGTTATTGAAAT TATTTAGAGATTATTCATTAGAGCGTAAAAAGGAAAGTATTGTTAGCTCT TTACTCAATTTTGCAGGTAGAAATGCCTTTTATCCTATCGCTGATTCTGA AATTAAAGTTTATTTCAGAAGAATTATTGAGCAAATGAGTATTGCAGATA TGGAAAATTGTTTAATTAAACCTAGCATATACTTTGACAAAATTAAAAAT AAAATTAAACAATTACAAGAAAAGTTTTCTCAACAGGAATTTTATAAATG GATCGATCAAGAATGTTTTCAAATTAAAGCTGAATATCAACTTCCAATAG AAATTACGCCTCAAAACTTTGCTGACTCATTAAGTCGTAGCTTATATGAG AGAGAAGCAAGCATGAATAATTATGAATTTAATGTAATATCTCGTGTTAT TAGCTTAGATAATGTTGTTTGGTGGCATCGTATTGATGACAAGAGAAAAG AATATAGCTTTAAAATAAATGGATTCATTAATCATTATCCCGACTTTCTA ATTTTAACAAAGAAAAACACTTTGATATTAGTTGAAGTGAAAGGAGAGCA ACTAGCCAACCCTGAATCTAAAAATAAATTAGAGTTAGGTAAAAAATGGG AGTCTCTTGCAAACCAACTTAGTTTACCACATAAATTTAAATACTTTATG GTGTTTATCACTAAACCTATGGAAGGAGCTAAATCACTAGATGAGTTAAT TAAAACAATTTCTTATCTT Los Alamos National Laboratory • Est 1943 Operated by Los Alamos National Security, LLC for the U.S. Department of Energy's National Nuclear Security Administration Inside | © Copyright 2006 LANS LLC All rights reserved | Disclaimer/Privacy